View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163A_low_234 (Length: 207)
Name: NF10163A_low_234
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_234 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 47094433 - 47094267
Alignment:
| Q |
23 |
taacaactatttcaaatgaacaacaaacattctcatcactcatctcacctctattcaacaatggcacccaaaacaaaccactcaaacgcgttcatcatct |
122 |
Q |
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| T |
47094433 |
taacaactatttcaaatgaacaaaaaacattctcatcactcatctcacctctattcaacaatggcacccaaaacaaaccactcaaacactttcatcatct |
47094334 |
T |
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| Q |
123 |
tcttactactcacaactactacattctccaactcaaccaaactcaacaacaaaaccaaaccctctct |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47094333 |
tcttactactcacaactactacattctccaactcaaccaaactcaacaacaaaaccaaaccctctct |
47094267 |
T |
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