View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10163A_low_44 (Length: 354)
Name: NF10163A_low_44
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_44 |
 | |
|
| [»] scaffold0009 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 58 - 352
Target Start/End: Original strand, 22990246 - 22990542
Alignment:
| Q |
58 |
taagctaggaagtactatgaattaagaagtaatctaagctaggat--gta-ctatgaagtattgttatgtttagtctttaatgttgtaatgttccgttgt |
154 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||| | || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22990246 |
taagataggatgtactatgaattaagaagtaatctagga-agtattagtaactatgaagtactgttatgtttagtctttaatgttgtaatgttccgttgt |
22990344 |
T |
|
| Q |
155 |
ctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaactat |
254 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22990345 |
ctttaaattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaactat |
22990444 |
T |
|
| Q |
255 |
gaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttcact |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22990445 |
gaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaatgaaagcttatgttgtgtgataattatgctcgtatttttggttcact |
22990542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 58 - 352
Target Start/End: Complemental strand, 22714979 - 22714683
Alignment:
| Q |
58 |
taagctaggaagtactatgaattaagaagtaatctaagctaggat--gta-ctatgaagtattgttatgtttagtctttaatgttgtaatgttccgttgt |
154 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||| | || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22714979 |
taagataggatgtactatgaattaagaagtaatctagga-agtattagtaactatgaagtactgttatgtttagtctttaatgttgtaatgttccgttgt |
22714881 |
T |
|
| Q |
155 |
ctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaactat |
254 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22714880 |
ctttaaattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaaaaagtgctagtaactat |
22714781 |
T |
|
| Q |
255 |
gaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttcact |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22714780 |
gaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaatgaaagcttatgttgtgtgataattatgctcgtatttttggttcact |
22714683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 58 - 352
Target Start/End: Complemental strand, 28949236 - 28948940
Alignment:
| Q |
58 |
taagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccgttgtc |
155 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| | || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28949236 |
taagctaggatgtactatgaattaagaagtaatctaggaagtaatagtaactatgaagtactgttatgtttagtctttaatgttgtaatgttccgttgtc |
28949137 |
T |
|
| Q |
156 |
tttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaactatg |
255 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28949136 |
tttaaattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaaaaagtgctagtaactatg |
28949037 |
T |
|
| Q |
256 |
aagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttcact |
352 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28949036 |
aagtactcttatgaagtacaaataacttatgtaatgtttctatcccttaatgaaagcttatgttgtgtgataattatgctcgtatttttggttcact |
28948940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 352
Target Start/End: Original strand, 22696864 - 22697165
Alignment:
| Q |
53 |
ggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccg |
150 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||| | || | ||||||||||| | || |||||||||||||||||||||||| || | |
|
|
| T |
22696864 |
ggaattaacctaggaagtactatgaattaagaagtaatctacgaagtactagtaactatgaagtactattttgtttagtctttaatgttgtaatgctctg |
22696963 |
T |
|
| Q |
151 |
ttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaa |
250 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22696964 |
ttgtctttaaattaagaagtaatctaggaagtaccggtaactttgaagtactgttatgtttttcctttcaattaggaagtaatctaagaagtggtagtaa |
22697063 |
T |
|
| Q |
251 |
ctatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttca |
350 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22697064 |
ctatgaagtactcttatgaagtactagtaacttatgtaatgtttctatcccttaatgaagacttatgttgtgtgataattatgctcgtatttatggttca |
22697163 |
T |
|
| Q |
351 |
ct |
352 |
Q |
| |
|
|| |
|
|
| T |
22697164 |
ct |
22697165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 46956533 - 46956852
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtt---tagtctt |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || | ||||||||| | |||||| || ||||||| |
|
|
| T |
46956533 |
gaacctgtgtgactaggaagtaagctagaaagtactatgaattaagaagtaatctaggaagtactagtaactatgaagcactgttatattatttagtctt |
46956632 |
T |
|
| Q |
133 |
taatgttgtaatgttccgttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaa |
232 |
Q |
| |
|
||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
46956633 |
taatgttgtaatgttccattatctttaaattaagaagtaatctaggaagtactagtaactatcaagtactgttatgttttgccttttaattaggaagtaa |
46956732 |
T |
|
| Q |
233 |
tctaagaagtgctagtaactatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattat |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||| |
|
|
| T |
46956733 |
tctaagaagtgctagtaactatgaagtactattatgaagtactagtaacttatgtaatgtttctataccttaatgaaggcttatgttgtgtgataattat |
46956832 |
T |
|
| Q |
333 |
gctcgtatttttggttcact |
352 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
46956833 |
gcttgtattttttgttcact |
46956852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 28949290 - 28949216
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagctaggatgtactatgaa |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
28949290 |
gaacctatgtgactaggaagtaagctaggaagtactatgagttaagaagcaatctaagctaggatgtactatgaa |
28949216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 22715033 - 22714959
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagctaggatgtactatgaa |
112 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22715033 |
gaacctctgtgattaggaagtaagttaggaagtactatgaattaagaagtaatctaagataggatgtactatgaa |
22714959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 22990192 - 22990266
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagctaggatgtactatgaa |
112 |
Q |
| |
|
|||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22990192 |
gaacctctgtgattaggaagtaagttaggaagtactatgaattaagaagtaatctaagataggatgtactatgaa |
22990266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 58 - 352
Target Start/End: Complemental strand, 200862 - 200556
Alignment:
| Q |
58 |
taagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccgttgtc |
155 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| | || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
200862 |
taagctaggatgtactatgaattaagaagtaatctaggaagtaatagtaactatgaagtactgttatgtttagtctttaatgttgtaatgttccgttgtc |
200763 |
T |
|
| Q |
156 |
tttagattaagaagtaatctaggaagtacctgtaactatgaagtact----------gttatgttttgcctttcaattaggaagtaatctaagaagtgct |
245 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
200762 |
tttaaattaagaagtaatctaggaagtacctgtaactatgaagtactatgaagtactgttatgtttttcctttcaattaggaattaatctaagaagtgct |
200663 |
T |
|
| Q |
246 |
agtaactatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttg |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
200662 |
agtaactatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaatgaaagcttatgttgtgtgataattatgctcgtatttttg |
200563 |
T |
|
| Q |
346 |
gttcact |
352 |
Q |
| |
|
||||||| |
|
|
| T |
200562 |
gttcact |
200556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 200916 - 200842
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagctaggatgtactatgaa |
112 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
200916 |
gaacctctgtgattaggaagtaagctaggaagtactatgaattaagaagtaatctaagctaggatgtactatgaa |
200842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 38 - 352
Target Start/End: Original strand, 20087585 - 20087901
Alignment:
| Q |
38 |
gaacctgtgtgactaggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaa |
135 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | || | ||||||||||| |||||| |||||||||||| |
|
|
| T |
20087585 |
gaacttgtgtgactaggaagtaagctaggaagtcttatgaattaagaagtaatctaggaagtactagtaactatgaagtactgttatatttagtctttaa |
20087684 |
T |
|
| Q |
136 |
tgttgtaatgttccgttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatct |
235 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20087685 |
tgttgtaatgttccgttatctttaaattaagaagtaatctagaaagtactagtaactatgaagtactgttatgttttgccttttaattaggaagtaatct |
20087784 |
T |
|
| Q |
236 |
aagaagtgctagtaactatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgct |
335 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
20087785 |
aagaagtactagtaactatgaagtactattatgaagtactagtaacttatgtaatgtttctatcccttaatgaagacttatgttgtgtgataattatgct |
20087884 |
T |
|
| Q |
336 |
cgtatttttggttcact |
352 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
20087885 |
tgtatttttggttcact |
20087901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 53 - 352
Target Start/End: Original strand, 19646298 - 19646599
Alignment:
| Q |
53 |
ggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccg |
150 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| | || | ||||||||||| | ||||||||| |||||||||||||||||||| | |
|
|
| T |
19646298 |
ggaattaagctaggaagtactatgaattaagaagtaatctacgaagtactagtaactatgaagtactcttatgtttaatctttaatgttgtaatgttctg |
19646397 |
T |
|
| Q |
151 |
ttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaa |
250 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19646398 |
ttgtctttaaattaagaagtaatctaggaagtaccggtaactttgaagtattgttatgtttttcctttcaattaggaagtaatctaagaagtggtagtaa |
19646497 |
T |
|
| Q |
251 |
ctatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttca |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
19646498 |
ctatgaagtactcttatgaagtaccagtaacttatgtaatatttctatcccttaatgaagacttatgttgtgtgataattatgcttgtatttttggttca |
19646597 |
T |
|
| Q |
351 |
ct |
352 |
Q |
| |
|
|| |
|
|
| T |
19646598 |
ct |
19646599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 352
Target Start/End: Original strand, 4344211 - 4344511
Alignment:
| Q |
53 |
ggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccg |
150 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| | || | ||||||||||| ||||||||||||||||||||||| ||||||| || |
|
|
| T |
4344211 |
ggaattaagctaggaagtactatgaattaagaagtaatctacgaagtactagtaactatgaagtactgttatgtttagtctttaatgtt-taatgtttcg |
4344309 |
T |
|
| Q |
151 |
ttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaa |
250 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4344310 |
ttgtctttaaattaagaagtaatctaggaagtaccagtaactttgaagtattgttatgtttttcctttcaattaggaagtaatctaagaagtggtagtaa |
4344409 |
T |
|
| Q |
251 |
ctatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttca |
350 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
4344410 |
ctatgaagtactcttatgaagtactagtaacttatgtaatgtttctatcccttaatgaagacttatgttgtgtgataattatgcttgtattttttgttca |
4344509 |
T |
|
| Q |
351 |
ct |
352 |
Q |
| |
|
|| |
|
|
| T |
4344510 |
ct |
4344511 |
T |
|
Back To:
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Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 53 - 352
Target Start/End: Original strand, 22808084 - 22808385
Alignment:
| Q |
53 |
ggaagtaagctaggaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccg |
150 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22808084 |
ggaattaagctaggaagtactataaattaagaagtaatctatgaagtactagtaactatgaagtattgttatgtttagtctttaatgttgtaatgttccg |
22808183 |
T |
|
| Q |
151 |
ttgtctttagattaagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaa |
250 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||| | |||||||||||||||||||||||||||| |||||| |
|
|
| T |
22808184 |
ttatctttaaattaagaagtaatctaggaagtactagtaactatgaagtactattatatttttcttttcaattaggaagtaatctaagaagtggtagtaa |
22808283 |
T |
|
| Q |
251 |
ctatgaagtactcttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttca |
350 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||| ||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22808284 |
ccatgaagtactcttatgaagtactagtaacttatgtaatttttttatcccttaatgaagacttatgttgtgtgataattatgctcgtatttttggttca |
22808383 |
T |
|
| Q |
351 |
ct |
352 |
Q |
| |
|
|| |
|
|
| T |
22808384 |
ct |
22808385 |
T |
|
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Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 66 - 352
Target Start/End: Complemental strand, 23362651 - 23362376
Alignment:
| Q |
66 |
gaagtactatgaattaagaagtaatctaagc--taggatgtactatgaagtattgttatgtttagtctttaatgttgtaatgttccgttgtctttagatt |
163 |
Q |
| |
|
|||||||||||||||||||||||||||| | || | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
23362651 |
gaagtactatgaattaagaagtaatctacgaagtactagtaactattaagtattgttatgtttagtctttaatgttgtaatgttccgttgtctttaaatt |
23362552 |
T |
|
| Q |
164 |
aagaagtaatctaggaagtacctgtaactatgaagtactgttatgttttgcctttcaattaggaagtaatctaagaagtgctagtaactatgaagtactc |
263 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
23362551 |
aagaagtaatctaggaagtactaataactatgaagtactgttatgtttttcctttcaattaggaagtaatctaagaagtggtagtaaccatgaagtact- |
23362453 |
T |
|
| Q |
264 |
ttatgaagtaccagtaacttatgtaatgtttctatcccttaacgaaagcttgtgttgtgtgataattatgctcgtatttttggttcact |
352 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23362452 |
------------agtaacttatgtaatgtttttatcccttaatgaagacttatgttgtgtgataattatgctcgtatttttggttcact |
23362376 |
T |
|
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