View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163A_low_96 (Length: 277)
Name: NF10163A_low_96
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_96 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 271
Target Start/End: Complemental strand, 21642682 - 21642420
Alignment:
| Q |
9 |
accatagaatgaaaacatctcccaaggtttacgtcattcaacgtagaacaagctttaataacggaagatagagtaaaagcattgggttgaataggaaatg |
108 |
Q |
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| T |
21642682 |
accatagaatgaaagcatctcccaaggtttacgtcatttaacgcagaacaagctttgataacagaagatagagtaaaagcattgggttgaacaggaaatg |
21642583 |
T |
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| Q |
109 |
ccaacatttcgtagaataaagatatcgactgatgtggctggccggagcgagtgtaaccggagatacgtgaagtccatgagataacatctttgacgtgaag |
208 |
Q |
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|||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
21642582 |
ccaacatttcgtagaataaagatatcgattgatgtggcaggtcggagcgagtgtaaccggagataagtgaagtccatgagatgacatctttgacgtgaag |
21642483 |
T |
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| Q |
209 |
tgagtcgaagagatgacgggcgtgagataaatgggggccggggtttaatttaaagtaaagagt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21642482 |
tgagtcgaagagatgacgggcgtgagataaatgggggccggggtttaatttaaagtaaagagt |
21642420 |
T |
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