View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10163_high_6 (Length: 331)

Name: NF10163_high_6
Description: NF10163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10163_high_6
NF10163_high_6
[»] chr8 (65 HSPs)
chr8 (1-310)||(10015132-10015441)
chr8 (1-269)||(1292311-1292580)
chr8 (8-308)||(3303474-3303780)
chr8 (5-310)||(5689326-5689633)
chr8 (1-307)||(43036474-43036786)
chr8 (1-266)||(40321131-40321398)
chr8 (2-310)||(1345178-1345487)
chr8 (1-310)||(15212837-15213153)
chr8 (5-313)||(41366417-41366727)
chr8 (5-310)||(6599027-6599331)
chr8 (5-310)||(6674480-6674784)
chr8 (1-310)||(30143391-30143706)
chr8 (1-310)||(19491505-19491816)
chr8 (1-270)||(42498245-42498522)
chr8 (1-310)||(4731709-4732024)
chr8 (1-310)||(12702433-12702751)
chr8 (1-270)||(27811329-27811605)
chr8 (1-266)||(33352201-33352473)
chr8 (42-310)||(4743029-4743289)
chr8 (1-235)||(18141871-18142105)
chr8 (1-270)||(18105917-18106195)
chr8 (10-266)||(3073723-3073981)
chr8 (5-270)||(1746060-1746331)
chr8 (9-287)||(34254155-34254440)
chr8 (9-287)||(34256331-34256616)
chr8 (1-196)||(30291658-30291856)
chr8 (5-270)||(44303910-44304182)
chr8 (28-310)||(4733784-4734073)
chr8 (9-287)||(17982712-17982997)
chr8 (1-310)||(8965494-8965808)
chr8 (1-126)||(42434981-42435108)
chr8 (5-287)||(31218312-31218601)
chr8 (1-126)||(4283575-4283702)
chr8 (1-126)||(18655451-18655578)
chr8 (5-270)||(19945200-19945473)
chr8 (1-120)||(4162548-4162668)
chr8 (1-126)||(11384036-11384163)
chr8 (5-125)||(3772247-3772369)
chr8 (1-126)||(10930188-10930316)
chr8 (1-110)||(40221796-40221907)
chr8 (149-310)||(3050927-3051090)
chr8 (8-272)||(2627792-2628068)
chr8 (1-126)||(8153809-8153936)
chr8 (1-310)||(11711807-11712118)
chr8 (8-126)||(40328837-40328954)
chr8 (1-243)||(7597665-7597909)
chr8 (127-270)||(8153966-8154107)
chr8 (5-67)||(9765800-9765863)
chr8 (1-75)||(44353844-44353919)
chr8 (43-270)||(29796170-29796394)
chr8 (5-108)||(3439558-3439664)
chr8 (42-115)||(10929881-10929961)
chr8 (5-110)||(25690009-25690117)
chr8 (258-315)||(26287710-26287765)
chr8 (258-315)||(26312961-26313016)
chr8 (146-271)||(32902027-32902151)
chr8 (1-75)||(32902215-32902291)
chr8 (258-310)||(31071463-31071514)
chr8 (258-293)||(18870797-18870832)
chr8 (258-293)||(30655465-30655500)
chr8 (260-294)||(1262188-1262222)
chr8 (258-310)||(28307370-28307419)
chr8 (258-310)||(26300960-26301010)
chr8 (258-287)||(33038044-33038073)
chr8 (171-241)||(4162692-4162759)
[»] chr4 (79 HSPs)
chr4 (1-310)||(46147197-46147508)
chr4 (1-310)||(26175438-26175753)
chr4 (1-310)||(36463198-36463506)
chr4 (1-310)||(48893445-48893755)
chr4 (1-310)||(31474202-31474510)
chr4 (5-310)||(45686989-45687295)
chr4 (5-310)||(12743730-12744038)
chr4 (1-309)||(47038219-47038527)
chr4 (1-312)||(52467157-52467471)
chr4 (1-242)||(36994575-36994817)
chr4 (5-310)||(12739355-12739663)
chr4 (1-310)||(56178438-56178754)
chr4 (1-310)||(9927260-9927575)
chr4 (1-270)||(6542028-6542296)
chr4 (1-310)||(4588010-4588318)
chr4 (1-310)||(37740676-37740992)
chr4 (1-306)||(34570220-34570531)
chr4 (30-313)||(37229528-37229809)
chr4 (5-270)||(5871875-5872144)
chr4 (1-270)||(29254545-29254819)
chr4 (1-287)||(48143094-48143392)
chr4 (5-287)||(5369906-5370196)
chr4 (1-310)||(54199710-54200023)
chr4 (5-310)||(52095164-52095475)
chr4 (1-253)||(5429730-5429989)
chr4 (1-126)||(6656007-6656134)
chr4 (1-126)||(50673837-50673964)
chr4 (1-268)||(5207693-5207959)
chr4 (84-310)||(24969801-24970028)
chr4 (8-270)||(13992132-13992402)
chr4 (1-126)||(40632496-40632623)
chr4 (1-126)||(8648190-8648317)
chr4 (1-126)||(8665459-8665586)
chr4 (5-160)||(12745266-12745427)
chr4 (2-126)||(41639478-41639604)
chr4 (1-126)||(12073443-12073571)
chr4 (1-107)||(35662492-35662600)
chr4 (9-167)||(51337123-51337283)
chr4 (5-202)||(29999720-29999920)
chr4 (42-167)||(21703784-21703910)
chr4 (5-126)||(41964470-41964594)
chr4 (1-126)||(54883071-54883199)
chr4 (1-126)||(379431-379559)
chr4 (1-126)||(26364287-26364415)
chr4 (1-107)||(27416974-27417082)
chr4 (1-110)||(50262706-50262818)
chr4 (1-75)||(24969163-24969238)
chr4 (8-315)||(52082460-52082767)
chr4 (1-110)||(2209764-2209877)
chr4 (1-143)||(3913499-3913642)
chr4 (5-126)||(46703555-46703680)
chr4 (5-75)||(12744089-12744160)
chr4 (1-121)||(26699436-26699560)
chr4 (1-317)||(48142181-48142495)
chr4 (8-75)||(12745478-12745546)
chr4 (5-75)||(12747798-12747869)
chr4 (85-200)||(29056496-29056610)
chr4 (4-310)||(5349964-5350266)
chr4 (2-126)||(12119591-12119719)
chr4 (8-134)||(31495296-31495428)
chr4 (1-152)||(22882715-22882868)
chr4 (1-152)||(22934379-22934532)
chr4 (149-248)||(3913782-3913878)
chr4 (12-107)||(13009453-13009550)
chr4 (5-110)||(8393448-8393557)
chr4 (5-110)||(8395657-8395766)
chr4 (94-201)||(39593647-39593754)
chr4 (1-74)||(21688300-21688374)
chr4 (258-310)||(28468761-28468811)
chr4 (2-39)||(41639315-41639352)
chr4 (258-293)||(24741765-24741800)
chr4 (232-287)||(29999653-29999708)
chr4 (43-167)||(37754908-37755034)
chr4 (262-310)||(31985871-31985917)
chr4 (1-38)||(32091529-32091566)
chr4 (258-287)||(34496057-34496086)
chr4 (1-38)||(34788855-34788892)
chr4 (1-38)||(55085445-55085482)
chr4 (239-287)||(1983515-1983562)
[»] chr5 (58 HSPs)
chr5 (1-312)||(538076-538389)
chr5 (1-305)||(42428237-42428547)
chr5 (20-310)||(42926961-42927258)
chr5 (1-317)||(42426030-42426352)
chr5 (1-310)||(13488254-13488567)
chr5 (1-310)||(533820-534125)
chr5 (1-270)||(13239802-13240078)
chr5 (5-310)||(8565750-8566059)
chr5 (5-312)||(32636879-32637192)
chr5 (1-271)||(16452131-16452403)
chr5 (1-310)||(28750457-28750772)
chr5 (9-310)||(31183031-31183339)
chr5 (5-310)||(33831735-33832044)
chr5 (9-270)||(37439200-37439467)
chr5 (1-310)||(39468350-39468666)
chr5 (1-310)||(30682724-30683041)
chr5 (5-287)||(36073867-36074155)
chr5 (42-310)||(19806456-19806727)
chr5 (5-270)||(13343116-13343387)
chr5 (5-270)||(25412815-25413087)
chr5 (86-310)||(5887237-5887464)
chr5 (90-270)||(16649676-16649856)
chr5 (1-110)||(40147312-40147423)
chr5 (1-256)||(9049210-9049459)
chr5 (5-167)||(13695639-13695804)
chr5 (1-136)||(28278367-28278504)
chr5 (5-126)||(213520-213644)
chr5 (5-270)||(30182643-30182915)
chr5 (1-126)||(5058096-5058223)
chr5 (3-147)||(3075627-3075773)
chr5 (8-272)||(26177939-26178215)
chr5 (8-270)||(16409532-16409806)
chr5 (8-110)||(9789229-9789335)
chr5 (1-126)||(16640930-16641054)
chr5 (8-110)||(18441653-18441759)
chr5 (24-126)||(27015597-27015701)
chr5 (1-110)||(38747056-38747167)
chr5 (232-310)||(3075551-3075629)
chr5 (1-104)||(42309947-42310052)
chr5 (8-126)||(27637602-27637723)
chr5 (42-210)||(26170855-26171032)
chr5 (204-309)||(42309827-42309931)
chr5 (5-134)||(10593312-10593446)
chr5 (1-50)||(42926918-42926968)
chr5 (98-166)||(30897563-30897631)
chr5 (8-110)||(29751165-29751270)
chr5 (1-126)||(316813-316942)
chr5 (5-110)||(22536295-22536403)
chr5 (94-152)||(30793282-30793340)
chr5 (4-121)||(33906024-33906145)
chr5 (258-310)||(15464345-15464395)
chr5 (1-166)||(3325964-3326130)
chr5 (8-134)||(29720422-29720552)
chr5 (8-134)||(29722582-29722712)
chr5 (258-310)||(24135661-24135711)
chr5 (1-66)||(10054867-10054933)
chr5 (258-294)||(35387490-35387526)
chr5 (258-310)||(40147556-40147608)
[»] chr1 (84 HSPs)
chr1 (1-310)||(16455672-16455982)
chr1 (1-310)||(23555073-23555382)
chr1 (5-270)||(50167021-50167288)
chr1 (1-310)||(28223223-28223538)
chr1 (5-310)||(45644160-45644467)
chr1 (1-310)||(13137782-13138093)
chr1 (5-310)||(833972-834280)
chr1 (5-310)||(40122003-40122311)
chr1 (1-306)||(28265365-28265671)
chr1 (1-310)||(46064969-46065276)
chr1 (1-310)||(28220028-28220343)
chr1 (5-287)||(50169039-50169323)
chr1 (1-311)||(15820358-15820660)
chr1 (1-270)||(3156916-3157192)
chr1 (9-270)||(196751-197017)
chr1 (5-270)||(3846962-3847234)
chr1 (1-306)||(4552454-4552754)
chr1 (5-315)||(8550581-8550900)
chr1 (1-310)||(30476248-30476563)
chr1 (1-310)||(41360965-41361276)
chr1 (1-310)||(13659153-13659453)
chr1 (5-310)||(37559666-37559981)
chr1 (1-287)||(49918401-49918694)
chr1 (1-310)||(10925274-10925588)
chr1 (2-310)||(1833574-1833874)
chr1 (1-310)||(927787-928093)
chr1 (1-217)||(3189381-3189604)
chr1 (1-217)||(3198198-3198421)
chr1 (1-217)||(3207037-3207260)
chr1 (1-310)||(31659289-31659604)
chr1 (1-310)||(44455211-44455526)
chr1 (5-287)||(20762727-20763012)
chr1 (1-126)||(193662-193789)
chr1 (1-310)||(37503364-37503671)
chr1 (1-126)||(13547079-13547206)
chr1 (1-122)||(11348749-11348872)
chr1 (1-126)||(31925697-31925824)
chr1 (5-269)||(13316194-13316465)
chr1 (8-126)||(13548990-13549110)
chr1 (5-126)||(37168352-37168476)
chr1 (1-126)||(47255329-47255457)
chr1 (141-287)||(8870551-8870698)
chr1 (1-160)||(36683741-36683892)
chr1 (1-110)||(42297980-42298092)
chr1 (1-106)||(19752737-19752844)
chr1 (46-271)||(44646654-44646875)
chr1 (1-110)||(19754546-19754657)
chr1 (1-125)||(29136298-29136425)
chr1 (1-110)||(37033077-37033190)
chr1 (5-211)||(51765450-51765666)
chr1 (46-271)||(44650012-44650233)
chr1 (42-246)||(5459999-5460203)
chr1 (5-124)||(7482222-7482344)
chr1 (1-310)||(37282500-37282809)
chr1 (1-167)||(3460747-3460915)
chr1 (5-122)||(47115226-47115347)
chr1 (1-242)||(2262850-2263092)
chr1 (5-106)||(34603631-34603735)
chr1 (19-126)||(37876756-37876865)
chr1 (49-144)||(8871034-8871130)
chr1 (27-126)||(28242382-28242483)
chr1 (1-75)||(6808503-6808579)
chr1 (217-285)||(36683883-36683951)
chr1 (98-167)||(16914124-16914193)
chr1 (8-134)||(40282435-40282565)
chr1 (5-134)||(9036471-9036604)
chr1 (8-110)||(9987259-9987364)
chr1 (5-121)||(22079371-22079491)
chr1 (8-134)||(20622217-20622349)
chr1 (258-294)||(24203002-24203038)
chr1 (239-285)||(32889274-32889320)
chr1 (219-308)||(3189620-3189708)
chr1 (219-308)||(3198437-3198525)
chr1 (219-308)||(3207276-3207364)
chr1 (1-75)||(9109461-9109537)
chr1 (5-38)||(22819502-22819535)
chr1 (1-38)||(25652137-25652174)
chr1 (1-67)||(32471511-32471579)
chr1 (58-154)||(43342270-43342367)
chr1 (9-69)||(13938195-13938258)
chr1 (258-294)||(19359080-19359116)
chr1 (258-294)||(19361670-19361706)
chr1 (258-294)||(19380310-19380346)
chr1 (252-310)||(29651622-29651679)
[»] chr3 (70 HSPs)
chr3 (5-315)||(29196186-29196499)
chr3 (1-310)||(32891155-32891456)
chr3 (1-307)||(44700289-44700595)
chr3 (1-287)||(31314496-31314784)
chr3 (1-310)||(9666272-9666583)
chr3 (9-310)||(23391714-23392018)
chr3 (5-306)||(39153170-39153474)
chr3 (1-288)||(7762316-7762611)
chr3 (5-310)||(22834809-22835115)
chr3 (5-310)||(760902-761209)
chr3 (1-310)||(29810919-29811235)
chr3 (1-269)||(16499080-16499340)
chr3 (5-293)||(19683706-19684002)
chr3 (1-310)||(51398865-51399180)
chr3 (1-270)||(40735434-40735709)
chr3 (1-310)||(29813114-29813428)
chr3 (1-315)||(5236254-5236573)
chr3 (5-310)||(7764519-7764832)
chr3 (1-310)||(40734549-40734863)
chr3 (5-310)||(23410133-23410442)
chr3 (50-310)||(27305521-27305777)
chr3 (5-197)||(53921422-53921616)
chr3 (115-310)||(21350813-21351004)
chr3 (5-287)||(9581337-9581627)
chr3 (5-270)||(5260164-5260436)
chr3 (5-287)||(29682414-29682700)
chr3 (5-270)||(37408513-37408786)
chr3 (43-310)||(2074885-2075149)
chr3 (5-270)||(5257985-5258257)
chr3 (5-224)||(32744335-32744549)
chr3 (8-287)||(9635948-9636236)
chr3 (5-270)||(45095218-45095490)
chr3 (1-110)||(34491263-34491374)
chr3 (2-126)||(4570004-4570131)
chr3 (2-126)||(6095589-6095715)
chr3 (106-316)||(51351937-51352143)
chr3 (1-126)||(54593755-54593882)
chr3 (1-126)||(30236176-30236304)
chr3 (1-126)||(46860525-46860653)
chr3 (9-110)||(40913352-40913455)
chr3 (1-110)||(44331596-44331707)
chr3 (1-106)||(46173408-46173515)
chr3 (1-110)||(43403749-43403862)
chr3 (1-110)||(49199474-49199587)
chr3 (1-167)||(33191883-33192050)
chr3 (5-266)||(23199982-23200251)
chr3 (11-126)||(55301961-55302079)
chr3 (170-266)||(9634666-9634763)
chr3 (5-144)||(23197908-23198052)
chr3 (1-110)||(43401806-43401919)
chr3 (1-110)||(47304302-47304413)
chr3 (8-134)||(801148-801280)
chr3 (5-126)||(41819512-41819636)
chr3 (8-96)||(7780024-7780114)
chr3 (1-67)||(36018903-36018970)
chr3 (5-110)||(6716554-6716662)
chr3 (1-50)||(31340268-31340318)
chr3 (5-110)||(54635179-54635287)
chr3 (258-310)||(1305763-1305813)
chr3 (258-310)||(1309668-1309718)
chr3 (258-310)||(32143135-32143185)
chr3 (258-294)||(2671824-2671860)
chr3 (258-294)||(8477188-8477224)
chr3 (9-137)||(4055742-4055874)
chr3 (1-60)||(35138762-35138823)
chr3 (258-287)||(8739302-8739331)
chr3 (258-287)||(9091540-9091569)
chr3 (1-34)||(41510313-41510346)
chr3 (1-74)||(20937707-20937781)
chr3 (258-294)||(40373033-40373069)
[»] chr7 (75 HSPs)
chr7 (1-310)||(36146214-36146524)
chr7 (5-310)||(41317240-41317547)
chr7 (1-310)||(31105202-31105510)
chr7 (1-310)||(47675938-47676253)
chr7 (1-316)||(47673740-47674060)
chr7 (5-310)||(14069635-14069946)
chr7 (5-310)||(14379663-14379974)
chr7 (6-310)||(41648816-41649123)
chr7 (5-270)||(8153397-8153664)
chr7 (5-310)||(38671027-38671335)
chr7 (1-266)||(495833-496100)
chr7 (5-310)||(19502233-19502545)
chr7 (1-277)||(23564903-23565178)
chr7 (22-266)||(24525351-24525598)
chr7 (1-310)||(1113708-1114019)
chr7 (1-310)||(23555091-23555408)
chr7 (1-310)||(26417367-26417683)
chr7 (13-310)||(31518965-31519256)
chr7 (3-310)||(31732770-31733084)
chr7 (1-308)||(43864295-43864609)
chr7 (1-310)||(4586212-4586528)
chr7 (1-310)||(48489482-48489797)
chr7 (5-310)||(18126699-18127013)
chr7 (1-270)||(27347868-27348144)
chr7 (1-310)||(48491630-48491942)
chr7 (5-287)||(25615908-25616199)
chr7 (1-271)||(4253375-4253646)
chr7 (1-270)||(23344026-23344292)
chr7 (5-287)||(29991108-29991397)
chr7 (1-271)||(36574363-36574633)
chr7 (5-270)||(35853969-35854243)
chr7 (1-194)||(12097789-12097976)
chr7 (1-126)||(32358044-32358171)
chr7 (1-133)||(22270024-22270158)
chr7 (2-126)||(4508696-4508822)
chr7 (1-182)||(2759127-2759314)
chr7 (1-126)||(29608788-29608915)
chr7 (154-256)||(30024612-30024714)
chr7 (8-211)||(39731426-39731638)
chr7 (1-126)||(6359941-6360069)
chr7 (5-287)||(4178829-4179117)
chr7 (1-110)||(6432022-6432133)
chr7 (1-122)||(48599328-48599451)
chr7 (5-270)||(25766798-25767074)
chr7 (1-110)||(34310721-34310833)
chr7 (5-126)||(3259050-3259173)
chr7 (2-126)||(4510538-4510664)
chr7 (2-126)||(4512380-4512506)
chr7 (5-270)||(48408857-48409134)
chr7 (1-108)||(30024740-30024849)
chr7 (1-126)||(2390333-2390461)
chr7 (1-110)||(2360978-2361089)
chr7 (8-126)||(8359305-8359427)
chr7 (8-200)||(43504063-43504266)
chr7 (1-126)||(22328379-22328508)
chr7 (94-271)||(40808734-40808910)
chr7 (43-110)||(30814530-30814598)
chr7 (5-110)||(20343951-20344059)
chr7 (43-166)||(26639419-26639544)
chr7 (2-59)||(31518847-31518905)
chr7 (78-143)||(5513640-5513705)
chr7 (49-134)||(1560646-1560734)
chr7 (192-256)||(12097020-12097084)
chr7 (1-75)||(5116655-5116731)
chr7 (258-310)||(18408578-18408628)
chr7 (258-294)||(1533678-1533714)
chr7 (106-165)||(3904418-3904477)
chr7 (258-293)||(20357785-20357820)
chr7 (258-287)||(3047085-3047114)
chr7 (46-117)||(18396415-18396488)
chr7 (258-310)||(18413455-18413505)
chr7 (258-310)||(6430442-6430494)
chr7 (258-294)||(21645834-21645870)
chr7 (2-38)||(27073868-27073904)
chr7 (2-38)||(27204409-27204445)
[»] chr2 (56 HSPs)
chr2 (1-310)||(33162256-33162567)
chr2 (5-310)||(723549-723857)
chr2 (5-316)||(34139569-34139884)
chr2 (1-310)||(36773613-36773924)
chr2 (5-270)||(11067360-11067627)
chr2 (1-310)||(36317815-36318126)
chr2 (1-310)||(2334220-2334535)
chr2 (5-310)||(11151397-11151704)
chr2 (5-287)||(14633652-14633939)
chr2 (43-310)||(39284930-39285200)
chr2 (8-310)||(36987877-36988186)
chr2 (5-310)||(42362407-42362711)
chr2 (1-310)||(17057171-17057486)
chr2 (1-310)||(17085154-17085469)
chr2 (5-310)||(29867924-29868235)
chr2 (1-304)||(38312291-38312600)
chr2 (1-287)||(11049604-11049888)
chr2 (5-270)||(45099810-45100081)
chr2 (1-310)||(6594806-6595123)
chr2 (5-310)||(11690556-11690854)
chr2 (5-270)||(36205506-36205777)
chr2 (1-268)||(26353235-26353495)
chr2 (5-269)||(4502975-4503245)
chr2 (128-310)||(24885770-24885951)
chr2 (1-168)||(17490096-17490265)
chr2 (5-287)||(5723080-5723369)
chr2 (1-159)||(7815231-7815390)
chr2 (97-266)||(14202269-14202440)
chr2 (130-270)||(2838132-2838272)
chr2 (94-269)||(12123434-12123607)
chr2 (1-126)||(35446874-35447001)
chr2 (5-270)||(4484169-4484444)
chr2 (1-110)||(45726980-45727091)
chr2 (84-211)||(1345602-1345730)
chr2 (1-310)||(13121820-13122124)
chr2 (1-107)||(1631741-1631849)
chr2 (1-125)||(42288101-42288227)
chr2 (9-211)||(30833404-30833615)
chr2 (1-126)||(7451169-7451295)
chr2 (4-165)||(42019821-42019987)
chr2 (8-272)||(32289621-32289897)
chr2 (1-126)||(33648222-33648351)
chr2 (1-108)||(24398108-24398219)
chr2 (42-167)||(28672024-28672151)
chr2 (42-106)||(17450671-17450735)
chr2 (8-110)||(6266749-6266854)
chr2 (123-165)||(41446315-41446357)
chr2 (258-310)||(3491565-3491615)
chr2 (258-294)||(9296639-9296675)
chr2 (5-110)||(13656037-13656146)
chr2 (252-287)||(21629784-21629819)
chr2 (179-269)||(36191103-36191192)
chr2 (98-167)||(7596960-7597029)
chr2 (1-38)||(42261566-42261603)
chr2 (48-93)||(42412117-42412162)
chr2 (258-294)||(14291311-14291347)
[»] chr6 (38 HSPs)
chr6 (1-270)||(9182872-9183148)
chr6 (1-310)||(26954093-26954403)
chr6 (5-310)||(28137213-28137521)
chr6 (5-270)||(33160192-33160465)
chr6 (3-241)||(33211060-33211300)
chr6 (120-312)||(3038727-3038919)
chr6 (42-270)||(16569115-16569347)
chr6 (5-287)||(5413219-5413507)
chr6 (84-310)||(14521480-14521710)
chr6 (26-287)||(5408894-5409161)
chr6 (5-270)||(31404516-31404788)
chr6 (1-126)||(21588982-21589109)
chr6 (1-126)||(21593715-21593842)
chr6 (5-287)||(5406027-5406313)
chr6 (5-287)||(5410352-5410638)
chr6 (5-270)||(16452169-16452442)
chr6 (5-270)||(30834375-30834649)
chr6 (1-126)||(5043678-5043806)
chr6 (1-126)||(2972929-2973056)
chr6 (1-126)||(26830113-26830240)
chr6 (5-270)||(2171368-2171644)
chr6 (1-126)||(17758074-17758202)
chr6 (1-126)||(17763041-17763169)
chr6 (1-110)||(603094-603205)
chr6 (1-202)||(4045474-4045671)
chr6 (1-126)||(26800638-26800766)
chr6 (1-106)||(3808717-3808826)
chr6 (2-75)||(3038945-3039019)
chr6 (8-134)||(3072739-3072871)
chr6 (8-110)||(412158-412265)
chr6 (5-126)||(22424815-22424940)
chr6 (94-167)||(12221053-12221126)
chr6 (42-110)||(6097456-6097526)
chr6 (258-294)||(5675005-5675041)
chr6 (2-62)||(26310412-26310472)
chr6 (5-110)||(27647915-27648023)
chr6 (258-287)||(30126032-30126061)
chr6 (258-310)||(602905-602957)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-310)||(148914-149214)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-310)||(20218-20532)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-270)||(114657-114930)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-310)||(27252-27560)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-211)||(434588-434801)
scaffold0002 (1-38)||(490401-490438)
[»] scaffold0286 (1 HSPs)
scaffold0286 (5-161)||(11612-11777)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-126)||(7378-7505)
[»] scaffold1668 (1 HSPs)
scaffold1668 (120-310)||(1303-1494)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-126)||(17993-18120)
[»] scaffold1519 (1 HSPs)
scaffold1519 (5-211)||(971-1183)
[»] scaffold0236 (1 HSPs)
scaffold0236 (7-126)||(10546-10667)
[»] scaffold0491 (2 HSPs)
scaffold0491 (8-211)||(8634-8846)
scaffold0491 (8-211)||(11060-11272)
[»] scaffold0978 (1 HSPs)
scaffold0978 (258-294)||(475-511)
[»] scaffold0674 (1 HSPs)
scaffold0674 (49-110)||(3731-3794)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-62)||(80338-80400)
[»] scaffold0188 (1 HSPs)
scaffold0188 (258-294)||(24279-24315)


Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 10015132 - 10015441
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttggac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10015132 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctctctccatagtaggtcaagttggac 10015231  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10015232 cgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 10015331  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10015332 gtattgttattattgtttttgcttgtgttcactttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttaaatcc 10015431  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  10015432 gaattcacaa 10015441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 1292580 - 1292311
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||| || ||| ||||||||||||||||    
T  1292580 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggatttgagaaataaatctctccccagagtaggtcaagttgga 1292481  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  1292480 ccgaactgggcaaacatttcttggtgtgtttgtttctcttctctccttatcttttgctcgtggttttgagcttttcactttgattcctagattagatcta 1292381  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    ||| |||||||| |||||  | ||||||||| ||||||||||| ||| |||||| || |||||| |||||    
T  1292380 ggtgttgttattgttgttactacttgtgtttactttgatattgtttactacttttctttgctccccacat 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 3303780 - 3303474
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaac 105  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||| || || | ||||||||||||||||||||||    
T  3303780 ctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccacagtaggtcaagttggaccgaac 3303681  T
Q  106 tgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgatta----ctaaattagatctagg 201  Q
    ||||||| || |  ||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||     ||| ||||||||||||    
T  3303680 tgggtaaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgtacttttcactttgattgattcctagattagatctagg 3303581  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | | |||||||||||| ||||||||||||| ||||||||||||||  |||||||| ||||||||||||| | ||||  |||||||| || ||||| ||||    
T  3303580 tgtagttattattgttgttgcttgtgtttgttttgatattggttaccactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccg 3303481  T
Q  302 aattcac 308  Q
    |||||||    
T  3303480 aattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 5689326 - 5689633
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | | |||||||||||||||    
T  5689326 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtcaagttggaccg 5689425  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||| ||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |    
T  5689426 aactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttacttgtggttttgagcttttcactttgattactaaattagatttagat 5689525  T
Q  203 attgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
     |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| || |    
T  5689526 gttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcgg 5689624  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  5689625 aattcacaa 5689633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 43036474 - 43036786
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||| ||||||| ||||| || |||| | |||||||||||||    
T  43036474 gttgaaactaatttcttgtaattcatttgtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcctccagattaggtcaagttgg 43036573  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  43036574 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttggttactagattag 43036673  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||||  |||| |||||||| |||||||||||| |||||| |||||||| ||||||||| ||||||||||||| || |||  |||||||| ||||||    
T  43036674 atctaggtggtgttgttattgttgttgcttgtgtttactttgaaattggttactactttcctttgctccacacatcattttttgtattggtgtgagtttt 43036773  T
Q  295 gaatccgaattca 307  Q
    || ||| ||||||    
T  43036774 gagtccaaattca 43036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 40321131 - 40321398
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||| |||||||||||||| |||| |||||||||| ||  ||||| ||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  40321131 gttgaagttaatttcttgtaacccattagtatctctttgtaaaaactctttgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 40321230  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  40321231 accgaactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 40321330  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    |||| |||||||||||||| |||||||||||| ||||||||||| ||  ||||||||| |||||||||    
T  40321331 aggtgttgttattattgttgttgcttgtgtttactttgatattgattgctactttcctttgctccaca 40321398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 310
Target Start/End: Complemental strand, 1345487 - 1345178
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttttag-gaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgga 99  Q
    ||||||||||||||||||||| ||| ||||||||||| |  ||||||||||||||||||||| |||| | ||||| || || | ||||||||||||| ||    
T  1345487 ttgaagctaatttcttgtaacccatatgtatctctttgaaagaactcattgatagtggattgaagagttcaatctctcccccagagtaggtcaagttaga 1345388  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    ||||||| ||| | || |  ||||||| ||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  1345387 ccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgagattttcactttgattactagattagatcta 1345288  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| || ||||||||||| ||| |||||||| ||||||||||||||| ||||||||| ||||||||| ||  ||||||  ||| |||| | |||||||||    
T  1345287 ggtgttattattattgttgttgtttgtgtttactttgatattggttactactttcctttgctccacagattattgtttgtatttgtgtga-ttttgaatc 1345189  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  1345188 cgaattcacaa 1345178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 15212837 - 15213153
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||| ||||| || || | | |||||||||||||    
T  15212837 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgataatggattggagagatcaatctctcccccagattaggtcaagttgg 15212936  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  ||||||||||||||| ||| |||||    
T  15212937 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggctttgtgcttttcactttgattcctagattag 15213036  T
Q  195 atctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||| ||||  ||||||| ||| || ||| |||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||    
T  15213037 atcaaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttt 15213136  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  15213137 tgagtccgaattcacaa 15213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 5 - 313
Target Start/End: Complemental strand, 41366727 - 41366417
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccga 103  Q
    ||||||||||||| ||||  ||||||||| |||| || ||||||||| |||||||||||||||||| ||||| || | | | ||||||||||||||||||    
T  41366727 aagctaatttcttttaacctatttgtatccctttgtaagaactcatttatagtggattggagagatcaatctctccctagattaggtcaagttggaccga 41366628  T
Q  104 actgggtaatcatttcttggtgt-atttgtttctcttctctc-cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||||  | || |  |||||||  ||||||||||||||| |  |||||||||| |||||||||||  ||||||||||||||| ||| ||||||||||||    
T  41366627 actgggacaacaatctttggtgtgttttgtttctcttctcccatttatcttttgtttgtggttttgtgcttttcactttgattcctatattagatctagg 41366528  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | |||||||| ||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||    
T  41366527 tgttgttattgttgttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccg 41366429  T
Q  302 aattcacaataa 313  Q
    ||||||||||||    
T  41366428 aattcacaataa 41366417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 6599027 - 6599331
Alignment:
Q  5 aagctaatttcttgtaactcatttgtat-ctcttttaggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||| || || || |||||||||||||||||||| ||||||| ||||| || || ||| |||||||||||||||||    
T  6599027 aagctaatttcttgtaacccatttgtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtcaagttggaccg 6599126  T
Q  103 aactgggtaatcatttcttggtgtattt-gtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    |||||||| | || |  ||||||| ||| |||||||||||| | ||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  6599127 aactgggtcaacaatctttggtgtgttttgtttctcttctccctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctagg 6599226  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | ||||||||||||   ||| |||||||  ||||||||||||||| ||||||||| ||||| ||||||| | ||||  |||||||| | |||||| ||||    
T  6599227 tgttgttattattg---ttgtttgtgttcactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccg 6599322  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  6599323 aattcacaa 6599331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 6674480 - 6674784
Alignment:
Q  5 aagctaatttcttgtaactcatttgtat-ctcttttaggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||| || || || |||||||||||||||||||| ||||||| ||||| || || ||| |||||||||||||||||    
T  6674480 aagctaatttcttgtaacccatttgtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtcaagttggaccg 6674579  T
Q  103 aactgggtaatcatttcttggtgtattt-gtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    |||||||| | || |  ||||||| ||| |||||||||||| | ||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  6674580 aactgggtcaacaatctttggtgtgttttgtttctcttctccctttatctttttcttgtggttttgtgcttttcactttgattactagattagatctagg 6674679  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | ||||||||||||   ||| |||||||  ||||||||||||||| ||||||||| ||||| ||||||| | ||||  |||||||| | |||||| ||||    
T  6674680 tgttgttattattg---ttgtttgtgttcactttgatattggttactactttcctttgctctacacatcatagtttgtattggtgtga-ttttgagtccg 6674775  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  6674776 aattcacaa 6674784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 30143391 - 30143706
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | |  |||||||||||     
T  30143391 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagataaggtcaagttga 30143490  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    || |||||| || | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  30143491 actgaactgagtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattag 30143590  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||    
T  30143591 atctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttt 30143689  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| || ||||||||||    
T  30143690 tgagtctgaattcacaa 30143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 19491816 - 19491505
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||||||  |||||| ||| | || || |||||||||||  ||||    
T  19491816 gttgaaactaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcatattgg 19491717  T
Q  99 accgaactgggtaatcatt-tcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||| ||| | || | ||||||||| ||||||||| ||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| |||||||     
T  19491716 accgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttactttgattcctagattagata 19491617  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    ||||| |||||||| ||||| || ||||||||| ||||||||||| ||| ||||||||| ||||||||||||| | ||||| ||||||   ||||||||     
T  19491616 taggtgttgttattgttgttgttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagtttt-attggttagagttttgag 19491518  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  19491517 tccgaattcacaa 19491505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 42498245 - 42498522
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||||||||| | ||||||| ||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  42498245 gttgaagctaatttcttgtaacccttttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 42498344  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttc--tcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||||||| ||||||||  ||||||||||||  ||||||||||||||||||||   |||||||||||||| ||| ||||    
T  42498345 gaccgaactgggtgaacaatctttggtgtgtttgtttccctcttctctccttttatcttttgcttgtggttttgtgtttttcactttgattcctagatta 42498444  T
Q  194 gatctaggtattgttattatt-gtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||| |||||||| ||  || |||||||||||  ||||||||||||||  ||||||||| |||||||||||||    
T  42498445 gatctaggtgttgttattgttaattattgcttgtgttcactttgatattggttgctactttcctttgctccacacatc 42498522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 4731709 - 4732024
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||  |||| || || | | | |||||||||||    
T  4731709 gttgaacctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcgatctctcccccagattcggtcaagttgg 4731808  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||| ||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  4731809 accgaattgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattag 4731908  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||| |||||||  ||||||||| ||||| ||||||||| ||||||||||||| ||||||  |||||||| | |||    
T  4731909 atctaggtgctgttattgttgattattgtttgtgttcactttgatatcggttactactttcctttgctccacacatcattgtttgtattggtgtga-ttt 4732007  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| | |||||||||||    
T  4732008 tgagttcgaattcacaa 4732024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 12702751 - 12702433
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | ||||| ||||||| || ||||||||||||| |||||||||||||| ||||| || || | | |||||||||||||    
T  12702751 gttgaagctaatttcttgtaacccttttgtgtctctttgtaagaactcattgatattggattggagagatcaatctctcccctagattaggtcaagttgg 12702652  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgatta-ctaaatta 193  Q
    |||||||||||| | || |  ||||| | |||||||||||  |||||||  ||||||| ||||||||||||||   ||||||||||||||  ||| ||||    
T  12702651 accgaactgggtcaacaatctttggtatgtttgtttctctcttctctccctttatcttgtgcttgtggttttgtgtttttcactttgattttctagatta 12702552  T
Q  194 gatctaggtat---tgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaag 290  Q
    ||||||||| |   ||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||| ||| |     
T  12702551 gatctaggtgtcgttgttattattgttgttgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtga- 12702453  T
Q  291 ttttgaatccgaattcacaa 310  Q
    |||||| |||||||||||||    
T  12702452 ttttgagtccgaattcacaa 12702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 27811329 - 27811605
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||| |||||| ||||| || || | | |||||||||||||    
T  27811329 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaacccattgatagtggattgaagagatcaatctctcccccagattaggtcaagttgg 27811428  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttc--tcttctct--ccttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||| || |  ||||||||  | |||||||||||||||| |||||  ||||||||||||||| |||||||||    
T  27811429 accgaactgggtcaacaatctttggtgtgttttttcccctcttctcttgctttatcttttgcttgtgattttgtgcttttcactttgattcctaaattag 27811528  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| | |||||||||||    
T  27811529 atctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttcctccacacatc 27811605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 33352201 - 33352473
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  33352201 gttgaacctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 33352300  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||| ||| ||||||  |||||| |||||||  ||||||||||||||| ||||   |||||||||||||| ||| |||||    
T  33352301 accgaactgggtcaacaatctttgatgtgtttgttcctctcttatctccttttatcttttgcttgtggatttgtgtttttcactttgatttctagattag 33352400  T
Q  195 atctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    || ||||| |||||||| ||| || |||||||||||  ||||||||||||||||||||||||| |||||||||    
T  33352401 atttaggtgttgttattgttgattattgcttgtgttcactttgatattggttattactttcctttgctccaca 33352473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 310
Target Start/End: Complemental strand, 4743289 - 4743029
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttc 140  Q
    |||||||||||||||||||||||||||| ||||| || || | ||||||||||||||||||||||||||| | || |  ||||||| |||||||||||||    
T  4743289 gaactcattgatagtggattggagagatcaatctctcccccaaagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctcttc 4743190  T
Q  141 tctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 240  Q
    |||| |||||||| |||||||||||||  ||||||||||||||| ||| ||||||||||||| ||||||         |||||||||||| ||||| |||    
T  4743189 tctctttatctttcgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgtta---------ttgcttgtgtttactttggtat 4743099  T
Q  241 tggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||  |||||||| ||||||||||||  | ||||  |||||||| || ||||| |||||||||||||    
T  4743098 tggttaccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaa 4743029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 18141871 - 18142105
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||||||| |||| || |||||| ||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  18141871 gttgaagctaatttcttgtaacccatttgtatcactttgtaagaactctttgatagtggattggagagatcaatctctcccctagattaggtcaagttgg 18141970  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||| |||||||  | || ||  ||||||  |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |    
T  18141971 accaaactgggccaacactt--tggtgtgcttgtttctctgctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatgt 18142068  T
Q  199 aggtattgttattattgtttttgcttgtgtttgcttt 235  Q
    |||| ||||||||||| || |||||||||||| ||||    
T  18142069 aggtgttgttattattattgttgcttgtgtttacttt 18142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 18106195 - 18105917
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttggac 100  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||||||||  |||||||||| ||||| || ||| | |||||||||||||||    
T  18106195 gttgaagctaatttcttgtaactcatttgtatcttttgtaagaactcattgatagtgt-ttggagagatcaatctctccccagaataggtcaagttggac 18106097  T
Q  101 cgaactgggtaa---------tcatttctt-ggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaa 190  Q
    |||||||||| |         |  |||||| |||  | |||||||||||||||| |||||||||||||||| |||||   |||||||||||||| ||| |    
T  18106096 cgaactgggtcaatggtgtgtttgtttctttggtcaagttgtttctcttctctctttatcttttgcttgtgattttgtgtttttcactttgattcctaga 18105997  T
Q  191 ttagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||||||  ||||||| ||||| |||||||||||| |||| |||||||||| ||||||||| ||||| |||||||    
T  18105996 ttagatctaggtgatgttattgttgttattgcttgtgtttactttaatattggttactactttcctttgctctacacatc 18105917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 266
Target Start/End: Complemental strand, 3073981 - 3073723
Alignment:
Q  10 aatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaactgg 108  Q
    |||||||||||||   ||||||||||||| || ||||||||||||| ||| |||||||||| ||||| || ||||||||||||||||||| |||||||||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaagaactcattgataatggcttggagagatcaatctctccccatagtaggtcaagttgggccgaactgg 3073882  T
Q  109 gtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgtt 208  Q
    |||| |||||||  |||| |||||||||||| |||| |||||||||||||||||||||| ||| |||||||| ||| ||| |||| |||||||| |||||    
T  3073881 gtaaacatttctatgtgtgtttgtttctcttatctctttatcttttgcttgtggttttgtactcttcacttt-attcctagattaaatctaggt-ttgtt 3073784  T
Q  209 attattgtttttgc---ttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
     || |||||  |||   ||||| || |||||||| |||||||||||||||| |||||||||    
T  3073783 gttgttgttgctgctcattgtggttactttgatactggttattactttcctttgctccaca 3073723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 1746331 - 1746060
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||||||||||||||| ||||||||    
T  1746331 aagctaatttcttgtaacccttttgtatctctttgaagaactcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggaccg 1746232  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| ||||||  ||||||||||||  |||| |||||||||||| ||||  ||||| ||||||||| ||| |||||||||    
T  1746231 aactgggtgaacaatcgttggtgtgtttgtttctctcttctctccttttatattttgcttgtgg-tttgcgcttttgactttgattcctagattagatct 1746133  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||  ||||||| ||| || |||||||||||  ||||| ||||||||| ||||||||| | |||||||||||    
T  1746132 aggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttactccacacatc 1746060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 287
Target Start/End: Complemental strand, 34254440 - 34254155
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaac 105  Q
    |||||||||||||| | ||||||||||||| || ||||| |||||||||||||||||||||| ||||| || || | ||||||||||||| |||||||||    
T  34254440 taatttcttgtaacccttttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaac 34254341  T
Q  106 tgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||| | || |  ||||||| |||||||||||  |||||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||||||    
T  34254340 tgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctagg 34254242  T
Q  202 tattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |  ||||||| ||| || ||||||||| |  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  34254241 tgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 34254155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 287
Target Start/End: Complemental strand, 34256616 - 34256331
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaac 105  Q
    |||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||| | ||||||||||| |||||||||||    
T  34256616 taatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaac 34256517  T
Q  106 tgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  |||||| |||||||| ||| ||||||||||||    
T  34256516 tgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgg-tttgtgcttttctctttgattcctagattagatctagg 34256418  T
Q  202 tattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |  ||||||| ||| || ||||||||| |  |||| |||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  34256417 tgctgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatcatagtttgtattggtgt 34256331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 30291658 - 30291856
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc--tccatagtaggtcaagttg 97  Q
    ||||||||||||||||||||||||||||||||| |||| || ||| || ||||||||||||||||||||| ||||| ||  |||| | || | |||||||    
T  30291658 gttgaagctaatttcttgtaactcatttgtatcactttgtaagaattctttgatagtggattggagagatcaatctctccctccagattatgccaagttg 30291757  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    ||||||||||  | | || |  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30291758 gaccgaactgaatcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgaactttccactttgattactagattagat 30291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 44303910 - 44304182
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||  | |||||||||||||| | |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| ||| |    
T  44303910 aagctaatttcttgtaatccttttgtatctctttttaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatc 44304009  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||| ||| | || |  ||||||| |||||||||||  |||||||||  |||||||||||||||||| |  ||||||||||||||| ||| ||||||||    
T  44304010 gaactaggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttcactttgatttctagattagatc 44304108  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||| |||||||| ||| || ||||||||| |  |||| |||||||||| ||||||||| |||||||||||||    
T  44304109 taggtgttgttattgttgattattgcttgtgctcactttaatattggttactactttcctttgctccacacatc 44304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 310
Target Start/End: Original strand, 4733784 - 4734073
Alignment:
Q  28 tgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtg 125  Q
    ||||||||||| || ||| ||||||||||||||||||||||||  |||| || || | | ||||||||||||||||||||||||| | || |  ||||||    
T  4733784 tgtatctctttgtaagaattcattgatagtggattggagagatcgatctctcccccagattaggtcaagttggaccgaactgggtcaacagtctttggtg 4733883  T
Q  126 tatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt-tt 220  Q
    | ||||||  |||||||||| |  ||||||||| ||||||||||||  ||||||| |||| || ||| ||| ||||||||| |||||||| ||| || ||    
T  4733884 tgtttgttcctctcttctctacctttatcttttccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttgattatt 4733983  T
Q  221 gcttgtgtttgctttgatattggttattactttcctctgctccacacatc-tttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||   |||||||||||||| ||||||||| ||||||||||||| || ||||  |||||||||| ||||||||||||||||||||    
T  4733984 gcttgtgttcattttgatattggttactactttcctttgctccacacatcattggtttgtattggtgtaa-ttttgaatccgaattcacaa 4734073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 17982712 - 17982997
Alignment:
Q  9 taatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaac 105  Q
    |||||||||||||| | |||||||||||||  | |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||    
T  17982712 taatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaac 17982811  T
Q  106 tgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||| | || |  ||||||| |||||||||||  |||||||||  || ||||||||||||||| |  ||||||||||||||| ||| ||||||||||||    
T  17982812 tgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatctagg 17982910  T
Q  202 tattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |  ||||||| ||| || |||||||||||  ||||| ||||||||| ||| ||||| ||||||||||||| | ||||  ||||||||    
T  17982911 tgctgttattgttgattattgcttgtgttcactttgttattggttactacgttcctttgctccacacatcatagtttgtattggtgt 17982997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 8965808 - 8965494
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||| ||||||||| |||| | ||| ||||||||| || |||||||||||||||| || |||||||||||||| || || ||| |||||||||||||    
T  8965808 gttgaagttaatttcttataacccttttatatctctttgtaagaactcattgatagtgcatcggagagataaatctctcccccatattaggtcaagttgg 8965709  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg--------aacttttcactttgattactaaa 190  Q
    |||||||||||||| ||||| | ||||| ||||||||| ||||||| |||||||||| |||||||||||           ||||||| |||||| ||| |    
T  8965708 accgaactgggtaaacatttatcggtgtgtttgtttcttttctctctttatcttttgtttgtggttttgtttttttttttttttcac-ttgattcctaga 8965610  T
Q  191 ttagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaag 290  Q
    ||| |||||||| |||||||| ||||| ||||||||| || ||||||||||||||| ||| ||||| |||||||| |||| | ||||| |||||||| |     
T  8965609 ttaaatctaggt-ttgttattgttgttgttgcttgtggttactttgatattggttactacgttcct-tgctccacgcatcatagtttt-attggtgtga- 8965514  T
Q  291 ttttgaatccgaattcacaa 310  Q
    |||||| | |||||||||||    
T  8965513 ttttgagttcgaattcacaa 8965494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42435108 - 42434981
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| || ||||| || |||| |||||||||||||||    
T  42435108 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtcaagttgg 42435009  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  42435008 accgaactgggtgaacatttcttggtgt 42434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 31218312 - 31218601
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||||||| ||||| | ||||| | ||||| ||||||||||| |||||||    
T  31218312 aagctaatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggacc 31218411  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||| ||||| | ||||||  |||||||||||| || ||| ||||||||    
T  31218412 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttgtgcttat-gttttgtgcttttcactttgtttcctagattagatc 31218510  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||  ||||||| ||| || |||||||  ||  ||||| ||||||||  ||||||||| ||||||||||||| | ||||  ||||||||    
T  31218511 taggtgctgttattgttgattattgcttgcattcactttgttattggttgctactttcctttgctccacacatcatagtttatattggtgt 31218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4283575 - 4283702
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||  | || | |||||||||||||||    
T  4283575 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtaggtcaagttgg 4283674  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  4283675 accgaactgggtgaacatttcttggtgt 4283702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18655451 - 18655578
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||| ||||| | ||||| |||||||||||||||    
T  18655451 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattagagagatcaatctctcctccaaagtaggtcaagttgg 18655550  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | ||||| |||||||    
T  18655551 accgaactgggtgaacattttttggtgt 18655578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 19945473 - 19945200
Alignment:
Q  5 aagctaatttcttgtaact-catttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga-c 100  Q
    ||||||||||||||||||  | |||||||||||||  | |||||||||||||||||||||||||| | ||||| || || | ||||||||||||| || |    
T  19945473 aagctaatttcttgtaaccacttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctcgagagtaggtcaagtttgaac 19945374  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||||| | || |  ||||||| |||||||||||  |||||||||  || ||||||||||||||| |  |||||||||| |||| ||| |||||||    
T  19945373 cgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcacttcgattcctagattagat 19945275  T
Q  197 ctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||  ||||||| ||| || |||||||  ||  ||||| ||||||||| ||||||||| |||||||||||||    
T  19945274 ctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatc 19945200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4162548 - 4162668
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||| || ||||| || || | |||||||||||||||    
T  4162548 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtcaagttgg 4162646  T
Q  99 accgaactgggtaatcatttct 120  Q
    |||||| ||||||| |||||||    
T  4162647 accgaattgggtaaacatttct 4162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11384036 - 11384163
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||| ||  |||| | ||||| ||||||| |||||||    
T  11384036 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaacccattgatactggattggagacatcgatctctcctccagagtaggttaagttgg 11384135  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | ||||| |||||||    
T  11384136 accgaactgggtgaacattttttggtgt 11384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 3772247 - 3772369
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccg 102  Q
    |||||||||||||||||||||||||||| ||||| || ||| | |||||||||||||||||||||| ||||| |||| || ||||||||||||||||||     
T  3772247 aagctaatttcttgtaactcatttgtatatctttgtaagaatttattgatagtggattggagagatcaatctatctctcagagtaggtcaagttggacca 3772346  T
Q  103 aactgggtaatcatttcttggtg 125  Q
    |||||| |||  |||||||||||    
T  3772347 aactggataaatatttcttggtg 3772369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10930316 - 10930188
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  10930316 gttgaagctaatttcttgtaacccatttatatctctttgtaagaacacattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 10930217  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    |||||||||||| ||  ||||||||||||    
T  10930216 accgaactgggtcaacaatttcttggtgt 10930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40221796 - 40221907
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  40221796 gttgaaactaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 40221895  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  40221896 accgaactgggt 40221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 310
Target Start/End: Complemental strand, 3051090 - 3050927
Alignment:
Q  149 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttg----tgtttgctttgatattggt 244  Q
    |||| ||||||||||||||| ||||||||||| ||| ||| ||||||||||||| |||||||||||||| |||||||    || ||||||||||  ||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggt 3050991  T
Q  245 tattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    || |||||| || | ||||||||||| || |||  |||||||| || ||||| ||| |||||||||    
T  3050990 tactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaa 3050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 2627792 - 2628068
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||| ||||| ||| ||||||||| |  | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  2627792 ctaatttcttgcaactctttttgtatctcttgtgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 2627891  T
Q  103 aactgggt-aatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||| ||| || ||||||||| |||||||  |||||  ||||||  ||||||| ||||||| |||||   |||||||| ||| || ||| ||||||    
T  2627892 aactgggtgaataatctcttggtgtctttgttttcctcttccctctccttttatcttgtgcttgt-gttttatgcttttcac-ttgtttcctagattaga 2627989  T
Q  196 tctaggtattgttattattg--tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctt 272  Q
    ||||||| |||||||| |||  ||||||||||      ||||| || |||||| ||||||||| |||||||||||||||    
T  2627990 tctaggtgttgttattgttgattttttgcttgcacccactttgttagtggttactactttcctttgctccacacatctt 2628068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8153809 - 8153936
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    ||||||||||| ||| |||||||| ||||||| ||||| || ||||||||||||||| |||||||||||| ||||| |||  || |||||||||||||||    
T  8153809 gttgaagctaaattcgtgtaactcttttgtatatctttgtaagaactcattgatagttgattggagagatcaatctcttcctcagagtaggtcaagttgg 8153908  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||| ||| |||  |||| |||||||    
T  8153909 accgaaatggataaatattttttggtgt 8153936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 11712118 - 11711807
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctc-catagtaggtca-agtt 96  Q
    |||||||||||||||||| ||| | ||| |||||||||   |  |||||||||||||||||||| |||||| ||||| || | || |||||||||  |||    
T  11712118 gttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattgtt 11712019  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttg---tttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    || || || ||||||| ||||||||| | | ||||   ||||| ||||||| ||||| |||| ||||||||||   |||| |||| | ||| ||| ||||    
T  11712018 ggtcctaattgggtaaacatttcttgatatgtttgtaatttcttttctctctttatcctttgtttgtggttttatgctttacactct-attcctatatta 11711920  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcc-tctgctccacacatctttgttttcattggtgtaagtt 292  Q
    ||||||||| ||| |||| ||||| || |||| | || |||| || ||||||| |||||||| | ||||||||||||||  ||||  |||||||||| ||    
T  11711919 gatctaggt-ttg-tattgttgttgtttcttgaggttacttttatcttggttactactttccttttgctccacacatctaagttt--attggtgtaa-tt 11711825  T
Q  293 ttgaatccgaattcacaa 310  Q
    |||| |||||||||||||    
T  11711824 ttgagtccgaattcacaa 11711807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 40328837 - 40328954
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaa 104  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||    |||||| |||    
T  40328837 ctaatttcttgtaactcattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggt----ttggacggaa 40328932  T
Q  105 ctgggtaatcatttcttggtgt 126  Q
    ||| || | |||||||||||||    
T  40328933 ctgagtgaacatttcttggtgt 40328954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 7597665 - 7597909
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    ||||||||||||||||| |||  | |||||||||||||   | |||  ||||||||||||||||||||||| ||||| | | |||||||||||||  |||    
T  7597665 gttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggtcattgtt 7597764  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
     ||||||||||| |||  |||| ||| |||   ||||||||||||||| |||||||||| || | ||||||   ||| ||| ||| || |||||||||||    
T  7597765 agaccgaactggataaatatttattgatgtgcgtgtttctcttctctctttatcttttgtttatcgttttgtgttttacac-ttggttcctaaattagat 7597863  T
Q  197 ctaggtattgttattattgtttttgcttgtgtttgctttgatattgg 243  Q
    ||| || |||||||| ||| | ||||||  | || ||||||||||||    
T  7597864 ctaagt-ttgttattgttggtgttgcttcaggttactttgatattgg 7597909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 270
Target Start/End: Original strand, 8153966 - 8154107
Alignment:
Q  127 atttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgt 226  Q
    ||||||||||||||| |  ||||||||||| |||  |||||   |||||||||| ||| ||| |||| |||||||| |||||||||||||| ||||||||    
T  8153966 atttgtttctcttctttgtttatcttttgcatgtaattttgtgtttttcacttt-attcctagattacatctaggt-ttgttattattgttgttgcttgt 8154063  T
Q  227 gtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    | || ||||||||||| ||| ||||||||| | || ||||||||    
T  8154064 ggttactttgatattgattactactttcctttacttcacacatc 8154107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 9765800 - 9765863
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagag 67  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  9765800 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagag 9765863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44353844 - 44353919
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| | |||| |||||    
T  44353844 gttgaagctaatttcttgtaacacatttgtatctctttgtaagaactcattgatagtggattgaaaagatcaatct 44353919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 270
Target Start/End: Complemental strand, 29796394 - 29796170
Alignment:
Q  43 aactcattgatagtggattggagagataaatctttctccata-gtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttc 140  Q
    |||||||| ||| |||||||||||||| ||||| || ||  | ||||||||  ||||||||||||| ||||| ||||| ||||||| || |||| |||||    
T  29796394 aactcatttataatggattggagagatcaatctctcccccaatgtaggtcattgttggaccgaacttggtaaacattt-ttggtgtgtt-gtttatcttc 29796297  T
Q  141 tctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 240  Q
    |||  ||||||||||||| || |||||  |||| |||||  ||||||| |||| ||||| | ||||||||||||||| ||||| | |  | ||||||||     
T  29796296 tctt-ttatcttttgcttatgattttgtgctttacactta-attactagattaaatctaag-attgttattattgttgttgctcgagaatactttgatac 29796200  T
Q  241 tggttattactttcctctgctccacacatc 270  Q
    |||||||||||| | | |||||||||||||    
T  29796199 tggttattacttccttttgctccacacatc 29796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 3439558 - 3439664
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||||| ||||||||||| ||||||    
T  3439558 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggac 3439656  T
Q  101 cgaactgg 108  Q
    ||||||||    
T  3439657 cgaactgg 3439664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 10929881 - 10929961
Alignment:
Q  42 gaactcattgatagtggattggagagataaatct-------ttctccatagtaggtcaagttggaccgaactgggtaatca 115  Q
    ||||||||||||||||||||||||||| ||||||       ||| |||||||||| || ||||||||||||||| ||||||    
T  10929881 gaactcattgatagtggattggagagagaaatctaaatctcttccccatagtaggccaggttggaccgaactggataatca 10929961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 25690009 - 25690117
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagag-ataaatctttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| ||||||||||||||||||| | |||   | ||||| ||||||||||| ||||||    
T  25690009 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggac 25690107  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  25690108 cgaactgggt 25690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 26287765 - 26287710
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 315  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||| ||||    
T  26287765 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaacaaat 26287710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 26313016 - 26312961
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataaat 315  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||| ||||    
T  26313016 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaacaaat 26312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 32902151 - 32902027
Alignment:
Q  146 ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtt 245  Q
    ||||||||||||| ||||||||   ||||||| ||| || ||| ||||||||||||| ||||| || ||||| ||| ||| | ||||||||||||| |||    
T  32902151 ttatcttttgcttttggttttgtgtttttcac-ttggttcctagattagatctaggt-ttgttgttgttgttgttgtttgaggttgctttgatattagtt 32902054  T
Q  246 attactt-tcctctgctccacacatct 271  Q
    | ||||| || | ||||||||||||||    
T  32902053 actacttctcttttgctccacacatct 32902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32902291 - 32902215
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatct 75  Q
    |||||||||||||||||||||||  ||||||||||||  | | ||| |||||||||||| ||| ||||||| |||||    
T  32902291 gttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatct 32902215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 31071463 - 31071514
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  31071463 tgctccacacatctttgtttacattggtgtgagtttt-tatccgaattcacaa 31071514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 18870797 - 18870832
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||||||||||||||||||||||||| |||||    
T  18870797 tgctccacacatctttgttttcattggtgtgagttt 18870832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 30655500 - 30655465
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||||||||||||||||||||||||| |||||    
T  30655500 tgctccacacatctttgttttcattggtgtgagttt 30655465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 294
Target Start/End: Original strand, 1262188 - 1262222
Alignment:
Q  260 ctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||| ||||||    
T  1262188 ctccacacatctttgttttcattggtgtgagtttt 1262222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 28307419 - 28307370
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||||||||||||| | |||   ||||||||||||||    
T  28307419 tgctccacacatctttgttttcattggtgtgatttt---atccgaattcacaa 28307370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 26301010 - 26300960
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||| ||||||||||| ||||||||| ||||||  ||||||||||||||    
T  26301010 tgctccacgcatctttgtttacattggtgtgagtttt--atccgaattcacaa 26300960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 33038044 - 33038073
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  33038044 tgctccacacatctttgttttcattggtgt 33038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 4162692 - 4162759
Alignment:
Q  171 ttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 241  Q
    |||||||||||||| ||| ||||||||||||   | ||||||||||| ||| ||||| || ||||||||||    
T  4162692 ttttcactttgattcctagattagatctagg---ttttattattgttgttgtttgtgattactttgatatt 4162759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 4e-97; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 46147508 - 46147197
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| || ||||| || || | | |||||||||||||    
T  46147508 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactctttgatagtggattggagacatcaatctctcccccaaattaggtcaagttgg 46147409  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  46147408 accgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 46147309  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | |||| ||||||||| ||||||||      
T  46147308 aggtattgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgcattggtgtgagttttgagg 46147209  T
Q  299 ccgaattcacaa 310  Q
    | ||||||||||    
T  46147208 cggaattcacaa 46147197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 26175753 - 26175438
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  26175753 gttgaaactaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 26175654  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  26175653 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattactagattag 26175554  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| |||||||||||| | |||||||||||| |||||| |||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||    
T  26175553 atctaggtgttgttattattgctattgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtgagtttt 26175454  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  26175453 gagtccgaattcacaa 26175438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 36463506 - 36463198
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| |||| |||||||||||||||| ||||| || || | | |||||||||||||    
T  36463506 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactctttgacagtggattggagagatcaatctctcccccagattaggtcaagttgg 36463407  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  |||||||  |||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||| |||||||||||    
T  36463406 accgaactgggtcaacaatctttggtgt--ttgtttctcttctctctttatcttttgcttgtggttttgagtttttcgctttgattaccaaattagatct 36463309  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||| | ||||  ||| |||| | |||||| |    
T  36463308 aggtgttgttattattgttgttgcttgtgtttactttgatattggttattactttcctttactccacacatcatagtttgtattagtgtga-ttttgagt 36463210  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  36463209 ccgaattcacaa 36463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 48893755 - 48893445
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  48893755 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 48893656  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||||||| |||||||||||||||| |||||  |||||||||||||||  |  |||||||||    
T  48893655 accgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtgattttgtgcttttcactttgattcttggattagatct 48893556  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    ||||  ||||||| ||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |    
T  48893555 aggtgctgttattgttgttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagt 48893457  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  48893456 ccgaattcacaa 48893445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 31474202 - 31474510
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||  ||| ||||| |||||||||    
T  31474202 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagttgattggagagataaatctctccaccagagtagatcaagttgg 31474301  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||| | |||||||| |||| || |||||  ||||||||||| ||| ||| |||||||||    
T  31474302 accgaactgggtaaacatatcttggtgtgtttgtttctcttctccctttatctttagcttttgattttgtgcttttcactttaattcctagattagatct 31474401  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||| ||||| ||| |||||||| ||||||||||| ||| ||||||| | |||| |||||||| ||||||  |||||||| |   |||| |    
T  31474402 aggtgttgttattgttgttgttgtttgtgtttactttgatattgattactactttcatttgctacacacatcattgtttgtattggtgtga---ttgagt 31474498  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  31474499 ccgaattcacaa 31474510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 45687295 - 45686989
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccg 102  Q
    ||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||  |||| || |||||| || ||||||||||||||    
T  45687295 aagctaatttcttataactcatttgtatctatttgtaagaactcattgatagtggattggagagatctatctctcctccatattatgtcaagttggaccg 45687196  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| ||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  45687195 aactgggtcaacaatctttggtgtgtttgtttcttttctctctttatctgttgcttgtggttttgagcttttcactttgattactagatt-gatctaggt 45687097  T
Q  203 attgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
     |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||| || |    
T  45687096 gttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccatacatcatagtttgtattggtgtga-ttttgagtctg 45686998  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  45686997 aattcacaa 45686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 12744038 - 12743730
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || ||| |||||||||||||||||    
T  12744038 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccg 12743939  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| ||||||  |||||| |||||||  ||||||||||||| ||||||  ||||||||||||||||||| |||||||||    
T  12743938 aactgggtcaacaatctttggtgtgtttgttcctctcttttctccttttatcttttgcttgtagttttgtgcttttcactttgattactagattagatct 12743839  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||||||||   |||||||||||| |||||| |||||||| ||||||||| ||||||||||| | | ||||  |||||||| |||||||| |    
T  12743838 aggtgttgttattattg---ttgcttgtgtttactttgaaattggttactactttcctttgctccacacaacatagtttgtattggtgtgagttttgagt 12743742  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  12743741 ccgaattcacaa 12743730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 47038527 - 47038219
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||||| |||||||||||| ||| || | |||||||||||||||||||||||||| ||||| || || | |||| ||||||||||    
T  47038527 gttgaagctaatttcttgtaa-tcatttgtatctgtttgtaaggactcattgatagtggattggagagatcaatctctcccccagagtaagtcaagttgg 47038429  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||    
T  47038428 accgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatct 47038329  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||| ||||| ||| |||||||| ||||||||||||||| ||||||||| || |||||||||| | ||||  |||||||| | |||||| |    
T  47038328 aggtgttgttattgttgttattgtttgtgtttactttgatattggttactactttcctttgttccacacatcatagtttgtattggtgtga-ttttgagt 47038230  T
Q  299 ccgaattcaca 309  Q
    || ||||||||    
T  47038229 ccaaattcaca 47038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 52467471 - 52467157
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||| ||||||||| |||||||||| |||| ||  ||||  ||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  52467471 gttgaagctaatatcttgtaacccatttgtatcactttgtaataactttttgatagtggattggagagatcaatctctccccgagattaggtcaagttgg 52467372  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  52467371 accgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 52467272  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    | || |||||||||||| |  |||||||| ||| |||||||||||||||  |||||||| |||| |||||||| | ||||  |||||||| ||||||||     
T  52467271 atgtgttgttattattgatgattgcttgtctttactttgatattggttaccactttcctttgcttcacacatcatagtttgtattggtgtgagttttgag 52467172  T
Q  298 tccgaattcacaata 312  Q
    |||||||||||||||    
T  52467171 tccgaattcacaata 52467157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 36994575 - 36994817
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || ||| ||| |||||||||    
T  36994575 gttgaagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagatcaagttgg 36994674  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || || |||| || ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  36994675 accgaactgggtcaacaatt-ttggcgtgtttgtttctcttctctctttatcttttgcttgtggttttgagtttttcactttgattactagattagatct 36994773  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattg 242  Q
    |||| |||||||||||||| |||||||||||| |||||| ||||    
T  36994774 aggtgttgttattattgttgttgcttgtgtttactttgaaattg 36994817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 12739663 - 12739355
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  12739663 aagctaatttcttgtaacccatttgtatctatttgtatgaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccg 12739564  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| ||||||  ||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||  |||||||||    
T  12739563 aactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattacttgattagatct 12739464  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||   || |||||||||||| |||||| |||||||| ||||||| | | ||||||||||| | ||||  |||||||| |||||||| |    
T  12739463 aggtgttgttatta---ttattgcttgtgtttactttgaaattggttactactttcttttactccacacatcatagtttgtattggtgtgagttttgagt 12739367  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  12739366 ccgaattcacaa 12739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 56178754 - 56178438
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  56178754 gttgaagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 56178655  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||||||||  ||||||||||| ||| ||| ||||    
T  56178654 gaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttcattcctagatta 56178555  T
Q  194 gatctaggtattgttatt-attgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtt 292  Q
    ||||||||| ||||||||  || || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | ||    
T  56178554 gatctaggtgttgttattgtttattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-tt 56178456  T
Q  293 ttgaatccgaattcacaa 310  Q
    |||| |||||||||||||    
T  56178455 ttgagtccgaattcacaa 56178438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 9927575 - 9927260
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  9927575 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 9927476  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||||| || | || |  ||||||| |||||| ||||  ||||||||| ||||||||||||||| ||||  ||||||||||||||| ||| |||| |    
T  9927475 accgaactgagtcaacaatctttggtgtgtttgttcctctattctctcctttatcttttgcttgtggatttgtgcttttcactttgattcctagattaaa 9927376  T
Q  196 tctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||  ||||||| ||| || |||||||||||| ||||||||||||| | ||||||||| ||||||||||||| | ||||  |||||||  ||||||    
T  9927375 tctaggtgctgttattgttgattattgcttgtgtttactttgatattggtaactactttcctttgctccacacatcatagtttatattggtgcgagtttt 9927276  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  9927275 gagtccgaattcacaa 9927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 6542296 - 6542028
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| |||||||||||| |  | ||||||||||||| || |||||| ||||||||||||||||||||| ||||| || || |  ||||||||||||||    
T  6542296 gttgaaactaatttcttgttagccttttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagggtaggtcaagttgg 6542197  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||| |||||| |||||   |||||||||| ||| ||| |||||||||    
T  6542196 accgaactgggtaaacatttcttggtgtgtttgtttctcttatctctttatctttttcttgtgattttgtgtttttcactttaattcctagattagatct 6542097  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||| |||   |||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  6542096 aggttttg---ttattgttgttgcttgtgattactttgatattggttattactttcctttgctccacacatc 6542028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 4588010 - 4588318
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||  ||||| || || ||| ||||| |||||||    
T  4588010 gttgaagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagaacaatctctcccccataataggtgaagttgg 4588109  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||| |||||||||| |||||| |||||| |||||||||| |||||| |||||||||||||||| |||||  ||||||||||||||| ||| ||||||| |    
T  4588110 accaaactgggtaaacatttcatggtgtgtttgtttctcctctctctttatcttttgcttgtgattttgtgcttttcactttgattcctatattagatat 4588209  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaag-ttttgaa 297  Q
     ||| |||   |||||||| ||| ||||| ||||||||||| |||||| || |||||| |||||||||||||   || || |||||||| || ||||||     
T  4588210 tggttttg---ttattgttgttgtttgtgattgctttgatagtggttactattttcctttgctccacacatcaaagtatt-attggtgtgagtttttgag 4588305  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  4588306 tccgaattcacaa 4588318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 37740676 - 37740992
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | | |||||||||||    
T  37740676 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttggtcaagttgg 37740775  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    ||||||||| || | || || || |||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  37740776 accgaactgtgtcaacaattttttgtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctacattag 37740875  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||| || ||||  ||||||||||| ||| ||||||||| ||||||||||||| | ||||  |||||||| |||||    
T  37740876 atctaggtgctgttattgttgattattgattctgttcactttgatattgattactactttcctgtgctccacacatcatagtttgtattggtgtgagttt 37740975  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||| ||||    
T  37740976 tgagtccgaatttacaa 37740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 34570531 - 34570220
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | ||||| |||||||    
T  34570531 gttgaagctaatttcttgtaacccaattgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggttaagttgg 34570432  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    | |||||||||| | || |  ||||||| ||||||  ||||||||||||||  ||||||||||||||||||||  |||||||||||||||  || |||||    
T  34570431 atcgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattcttagattag 34570332  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| |||||||| ||| || ||| |||||||   |||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||    
T  34570331 atctaggtgttgttattgttgattattgtttgtgttcattttgatattggttactactttcctttgctccacacatcatagtttatattggtgtga-ttt 34570233  T
Q  294 tgaatccgaattc 306  Q
    |||||||||||||    
T  34570232 tgaatccgaattc 34570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 30 - 313
Target Start/End: Complemental strand, 37229809 - 37229528
Alignment:
Q  30 tatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatttcttggtgta 127  Q
    ||||||||| || ||||||||| |||||||||||||||||| ||||| || | |||||||||||||||||||||||||| ||||| |||||||||| ||     
T  37229809 tatctctttgtaagaactcatttatagtggattggagagatcaatctctccctcatagtaggtcaagttggaccgaactaggtaaacatttcttggcgtg 37229710  T
Q  128 tttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtg 227  Q
    ||||||||||||||||| ||||||||| ||| ||||||||  ||||||||||| ||| ||||||||||||||||| | |||||| ||||| ||||||||     
T  37229709 tttgtttctcttctctctttatcttttacttatggttttgtgcttttcacttt-attcctaaattagatctaggt-tggttattgttgttattgcttgtt 37229612  T
Q  228 tttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaataa 313  Q
     || ||||||||||||||| ||||| ||  ||||||||||| | | ||||| |||||| | | |||||| ||||||||||||||||    
T  37229611 gttactttgatattggttactacttcccattgctccacacaacatagtttt-attggtttta-ttttgagtccgaattcacaataa 37229528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 5871875 - 5872144
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||| ||||||||||||| ||||| |||| ||||  | |||||| ||||||||||||| ||||||| ||||| || || | | ||||||||||| |||||    
T  5871875 aagcaaatttcttgtaacccatttttatcactttgcaagaactctttgatagtggattagagagatcaatctctcccccagattaggtcaagtttgaccg 5871974  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctc--ttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||| | || |  ||||||| |||| |||||  |||||||  |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  5871975 aactgggtcaacaatctttggtgtgtttgattctctcttctctctctatcttttgcttttggttttgagcttttcactttgattactagattagatctag 5872074  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    || |||||||||||||| ||| |||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  5872075 gtgttgttattattgttgttgtttgtgttcactttgatattggttactactttcctttgctccacacatc 5872144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 29254545 - 29254819
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||| |||||||||| ||| ||||||| ||||||| || |||||| ||||||||||||||||||||| ||||| ||||| | | |||||||||||||    
T  29254545 gttgaagttaatttcttgcaacccatttgtgtctctttgtaagaactcgttgatagtggattggagagatcaatctctctcccaaattaggtcaagttgg 29254644  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||| ||||  |||||||  ||||||||||||||||||||||   |||||||||||||||||| |||||    
T  29254645 accgaactgggtcaacaatctttggtgtgtttgttcctctattctctccatttatcttttgcttgtggttttgtgtttttcactttgattactagattag 29254744  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||| |||||||||||||  ||| |||||||  |||| |||||||||| |||||| || |||||||||||||    
T  29254745 atctaggtgttgttattattgtcgttgtttgtgttcactttaatattggttactacttt-ctttgctccacacatc 29254819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 48143094 - 48143392
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||||||| | ||||||||||||  || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||    
T  48143094 gttgaagctaatttcttgtaacccttttgtatctcttcataagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 48143193  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaac----ttttcactttgattactaa 189  Q
    |||| |||||||| | || |  ||||||| ||||||  ||||||||||||  |||||||||||||||| |||||  |    |||||||||||||| |||     
T  48143194 gaccaaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgattttgtgcttttttttcactttgattcctag 48143293  T
Q  190 attagatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  48143294 attagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 48143392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 5370196 - 5369906
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||| | ||||||| ||||| || |||| ||||||||||||| |||||    
T  5370196 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggacc 5370097  T
Q  102 gaactgggtaatcatttcttggtgtatttgttt--ctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||| || | || |  ||| ||| |||||||  |||||||||||||  ||||||||||||||||||||  ||||||||||||||| ||| ||||||||    
T  5370096 gaactgagtgaacaatctttgatgtgtttgtttatctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatc 5369997  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||  ||||||| ||| || |||||||||||  ||||||||||| ||| ||||||||| | ||||||||||| | ||||  ||||||||    
T  5369996 taggtgctgttattgttgattattgcttgtgttcactttgatattgattactactttcctttactccacacatcatagtttgtattggtgt 5369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 54200023 - 54199710
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||| ||||||| | ||| | | ||| | |||||||||||||    
T  54200023 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtgaattagagagatcattctctcccccagattaggtcaagttgg 54199924  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc-ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    | |||||||||| | || || ||||||| ||||||  |||||||||||| |||| |||||||||||| ||||  |||||||||||||||  || ||||||    
T  54199923 a-cgaactgggtcaacaatttttggtgtgtttgttcctctcttctctcctttatattttgcttgtggatttgtgcttttcactttgattcttagattaga 54199825  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||  |||||||  || || |||||||||||  |||||||| |||||| ||||||||| ||||||| ||||| | ||||  |||||||| | ||||    
T  54199824 tctaggtgatgttattgctgattattgcttgtgttcactttgatactggttactactttcctttgctccatacatcatcgtttgtattggtgtga-tttt 54199726  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  54199725 gagtccgaattcacaa 54199710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 52095475 - 52095164
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| ||||||||||||||| || ||| || ||||||||||||||||||||| ||||| || |||| |||||| |||||| |||||    
T  52095475 aagctaatttcttgtaacccatttgtatctctttgtaagaaatctttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggacc 52095377  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || || ||||||| |||||||||||  |||||||||  ||||||| ||||||||||||  |||||| |||||| | ||| ||||||||    
T  52095376 gaactgggtgaacaatttttggtgtgtttgtttctctcttctctccttttatcttttccttgtggttttgtgcttttctctttgactcctagattagatc 52095277  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttga 296  Q
    ||||| |||||||| ||| || || ||||||||  ||||||||||| ||| ||||||||| || ||||||| || | ||||  |||||||| | ||||||    
T  52095276 taggtgttgttattgttgattattacttgtgttcactttgatattgattactactttcctttgttccacacgtcatagtttgtattggtgtga-ttttga 52095178  T
Q  297 atccgaattcacaa 310  Q
     |||||||||||||    
T  52095177 gtccgaattcacaa 52095164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 5429730 - 5429989
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||| ||||| || || | | ||||| |||||||    
T  5429730 gttgaagctaatttcttgtaacccatttgtatctatttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggttaagttgg 5429829  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||| ||| ||||||  ||||||||||||  ||||||||| ||||||||||||| ||||||||||||||| ||| |||||    
T  5429830 accgaactgggtcaacaatctttgatgtgtttgttcctctcttctctccctttatcttttacttgtggttttgagcttttcactttgattcctagattag 5429929  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattacttt 253  Q
    ||||||||  ||||||| ||| || ||| |||||||  ||||||||||| ||| ||||||    
T  5429930 atctaggtgctgttattgttgattattgtttgtgttcactttgatattgattactacttt 5429989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6656007 - 6656134
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  6656007 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagttgg 6656106  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||| ||||| | |||||||||||||    
T  6656107 accgaattgggtgaacatttcttggtgt 6656134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 50673964 - 50673837
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  50673964 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 50673865  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||| ||| | |||||||||||||    
T  50673864 accgaactaggtgaacatttcttggtgt 50673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 5207959 - 5207693
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| ||| ||| | | | ||||| ||| || ||||||||||||||||||||||| |||| ||||| ||||| | |||||||||| ||||    
T  5207959 gttgaagctaatttattgcaacccttgtatatctatttgtaagaactcattgatagtggattggaaagatcaatctctctcccagagtaggtcaatttgg 5207860  T
Q  99 accgaactgggtaatcatttcttggtgt--atttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    || ||| ||||||| ||||| |||||||  |||||||||||||||||  |||||| |||| ||||||||||  |||||||| |||||| |||||||||||    
T  5207859 actgaattgggtaaacatttattggtgtgtatttgtttctcttctctatttatctgttgcatgtggttttgtgcttttcac-ttgattcctaaattagat 5207761  T
Q  197 ctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacaca 268  Q
    ||||||    ||  ||||||| ||||||| | || |||||||||   ||| ||||||||| |||||||||||    
T  5207760 ctaggt----ttgatattgttgttgcttgaggttactttgatatcaattactactttcctttgctccacaca 5207693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 310
Target Start/End: Original strand, 24969801 - 24970028
Alignment:
Q  84 agtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttga---acttttcacttt 180  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||| |||||||||     |||||||||     
T  24969801 agtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgtttctcttctcactttatcgtttgcttatggttttgagttttttttcactta 24969900  T
Q  181 gattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttca 280  Q
    ||||| || ||||||||||||| |     || ||||| ||| ||||| ||  |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  24969901 gattagtagattagatctaggtgtctactttcttgttgttggttgtgattattttgatattggttactactttcctttgct-cacacatctttgttttca 24969999  T
Q  281 ttggtgtaagttttgaatccgaattcacaa 310  Q
    |  |||| | |||||| | |||||||||||    
T  24970000 tcagtgtga-ttttgagttcgaattcacaa 24970028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 13992402 - 13992132
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaac 105  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||||    
T  13992402 ctaatttcttgtaactcttttgtatctcttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaac 13992303  T
Q  106 tgggtaatcatttcttggtgtatttgtttctct--tctctcc---ttatctttt-gcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    | ||| | || |  ||||||| |||||||||||  |||||||   ||||||||| ||||||| ||| |  ||||||||||||||  ||| ||||||||||    
T  13992302 taggtgaacaatctttggtgtgtttgtttctctcttctctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagattagatcta 13992204  T
Q  200 ggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||  ||||||| ||| || |||||||   |  ||||| ||||||||| ||||||||| |||||||||||||    
T  13992203 ggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatc 13992132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 40632496 - 40632623
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | |||| ||||||||||    
T  40632496 gttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctaaagtaagtcaagttgg 40632595  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||||| |||||||||||||    
T  40632596 accgaactgggtaaacatttcttggtgt 40632623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8648190 - 8648317
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    ||||||||||||||||| |||| ||||||||||||||| || ||||||||||||| |||||||||||||| ||||| || |||| |||||||||||||||    
T  8648190 gttgaagctaatttcttataacccatttgtatctctttgtaagaactcattgatattggattggagagatcaatctctcctccagagtaggtcaagttgg 8648289  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    ||| |||||||| | |||||||||||||    
T  8648290 accaaactgggtgaacatttcttggtgt 8648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8665459 - 8665586
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  8665459 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 8665558  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    ||| |||| |||   |||||||||||||    
T  8665559 accaaactaggtgtacatttcttggtgt 8665586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 12745427 - 12745266
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||||||    
T  12745427 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccg 12745328  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgt 160  Q
    |||||||| | || |  ||||||| ||||||  |||||| |||||  |||||||||||||||    
T  12745327 aactgggtcaacaatctttggtgtgtttgttcctctcttttctccttttatcttttgcttgt 12745266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 41639478 - 41639604
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga 99  Q
    ||||||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||||||||||| ||||| || |||| ||||||||||||||||    
T  41639478 ttgaagctaatttcttgtaacccatttgtatctatttgtaagaactcatcgatagtggattggagagatcaatctctcctccagagtaggtcaagttgga 41639577  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    |||||||| || | |||||||||||||    
T  41639578 ccgaactgagtgaacatttcttggtgt 41639604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12073443 - 12073571
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtca-agttg 97  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||  ||||    
T  12073443 gttgaagctaatttattgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcttccagagtaggtcattgttg 12073542  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||| ||| | |||||||||||||    
T  12073543 gaccgaactaggtgaacatttcttggtgt 12073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35662492 - 35662600
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | | ||| | |||||||||||||||    
T  35662492 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatatctcctcaagagtaggtcaagttgg 35662591  T
Q  99 accgaactg 107  Q
    |||||||||    
T  35662592 accgaactg 35662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 51337123 - 51337283
Alignment:
Q  9 taatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaact 106  Q
    |||||| || |||| | |||||||||||||| | |||||||||||||||| ||| ||||||| ||||| || | || | |||||||||||||||||||||    
T  51337123 taatttattataacccttttgtatctctttttaagaactcattgatagtgtattagagagatcaatctctcccacacattaggtcaagttggaccgaact 51337222  T
Q  107 gggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    |||||| |||||| |||||| ||||||| ||||||||  |||||||||||||||| |||||    
T  51337223 gggtaaacatttcgtggtgtgtttgtttatcttctctttttatcttttgcttgtgattttg 51337283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 29999920 - 29999720
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||||| ||||||||| ||||  | |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||    
T  29999920 aagctaatttcttgtaactcttttgtatcttttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggac 29999821  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||||| | ||    ||||||| ||||||  ||||||||||||  || |||||||||||||| ||||   ||||| |||||||| ||| |||||||    
T  29999820 cgaactgggtgaaca----ttggtgtgtttgtttctctcttctctccttttgtcttttgcttgtgg-tttgtgtttttctctttgattcctagattagat 29999726  T
Q  197 ctaggt 202  Q
    ||||||    
T  29999725 ctaggt 29999720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 21703910 - 21703784
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttctccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttc 140  Q
    ||||||||||| ||||||||||||| || ||||| || |||||||||||||  ||| ||||||||||||||| ||||||||| ||| |||||||||||||    
T  21703910 gaactcattgacagtggattggagatatcaatctatccccatagtaggtcattgtttgaccgaactgggtaaacatttcttgatgtgtttgtttctcttc 21703811  T
Q  141 tctccttatcttttgcttgtggttttg 167  Q
    |||| |||| ||||||||||| |||||    
T  21703810 tctctttatattttgcttgtgattttg 21703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 41964470 - 41964594
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggacc 101  Q
    |||||||||| ||||||| ||||| ||||| |||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||    
T  41964470 aagctaatttattgtaacccattttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggacc 41964569  T
Q  102 gaactgggtaatcatttcttggtgt 126  Q
    ||||||||| | |||||||||||||    
T  41964570 gaactgggtgagcatttcttggtgt 41964594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 54883071 - 54883199
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||| ||| ||||| | ||||| | || ||||||||||    
T  54883071 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagggatcaatctctcctccagattaagtcaagttgg 54883170  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    |||||||||||| ||  ||||||||||||    
T  54883171 accgaactgggtcaacaatttcttggtgt 54883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 379431 - 379559
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| |||||||||| |||| || ||||| |||||||||||||||||||||| ||||| | ||||| |||||||||  ||||    
T  379431 gttgaagctaatttcttgtaacccatttgtatcgctttgtaagaactaattgatagtggattggagagatcaatctctcctccagagtaggtcattgttg 379530  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||||| | | |||||||||||||    
T  379531 gaccgaactggatgaacatttcttggtgt 379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26364287 - 26364415
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||||| | | ||| | ||||||||||| |    
T  26364287 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattaatagtggattggagagatcaatctctcccccagattaggtcaagtttg 26364386  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    || ||||||||| ||  ||||||||||||    
T  26364387 actgaactgggtcaacaatttcttggtgt 26364415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27417082 - 27416974
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  27417082 gttgaagctaatttcttgtaacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 27416983  T
Q  99 accgaactg 107  Q
    |||||||||    
T  27416982 accgaactg 27416974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50262818 - 50262706
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatcttt-ctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| ||||||||| || ||||||| ||||| |||||||||  ||||    
T  50262818 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagttgattggagatatcaatctttcctccagagtaggtcattgttg 50262719  T
Q  98 gaccgaactgggt 110  Q
    |||||||||||||    
T  50262718 gaccgaactgggt 50262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24969163 - 24969238
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  24969163 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 315
Target Start/End: Complemental strand, 52082767 - 52082460
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg-gaccgaa 104  Q
    ||||||||||||||| ||||||||||||||| || ||| || |||||||||||       ||| | ||| || |||| |||||||||||||  ||||||     
T  52082767 ctaatttcttgtaacccatttgtatctctttgtaagaaatctttgatagtgga-------gatcattctctcctccagagtaggtcaagtttagaccgat 52082675  T
Q  105 ctgggtaatcatttcttggtgtatttgttt--ctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
     ||||| | || |  ||||||| |||||||  |||||||||||||  |||||||||||||||||||   ||||||  ||||||| ||| || ||||||||    
T  52082674 ttgggtgaacaatctttggtgtgtttgtttatctcttctctccttttatcttttgcttgtggttttatgcttttctttttgattcctagataagatctag 52082575  T
Q  201 gtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| || |||||||||| |  |||  |||||||| | |||||| ||    
T  52082574 gtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgttccacacatcataatttgtattggtgtga-ttttgagtc 52082476  T
Q  300 cgaattcacaataaat 315  Q
    ||||||||||| ||||    
T  52082475 cgaattcacaacaaat 52082460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2209764 - 2209877
Alignment:
Q  1 gttgaagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||  |||    
T  2209764 gttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggtt 2209863  T
Q  97 ggaccgaactgggt 110  Q
    ||||||||||||||    
T  2209864 ggaccgaactgggt 2209877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3913499 - 3913642
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    ||||||||||||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||||||| ||||| || | | |||| || |||||| |    
T  3913499 gttgaagctaatttcttttaacccatttgtatatctttgtaagaactcattgatagtggattggagagatcaatctctccctagagtatgtaaagttgta 3913598  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctct 143  Q
     |||||||||| | || |  ||||||| || |||||||||||||    
T  3913599 tcgaactgggtcaacaatctttggtgtgttcgtttctcttctct 3913642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 46703555 - 46703680
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggac 100  Q
    |||||||||||||||||| ||||| |||||||||| || ||||||||| |||||||||||||||||| ||||| | ||||| |||||||||  |||||||    
T  46703555 aagctaatttcttgtaacccattttgtatctctttgtaagaactcatttatagtggattggagagatcaatctctcctccagagtaggtcattgttggac 46703654  T
Q  101 cgaactgggtaatcatttcttggtgt 126  Q
    |||| ||||| | |||||||||||||    
T  46703655 cgaattgggtgaacatttcttggtgt 46703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12744160 - 12744089
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  12744160 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatct 12744089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26699560 - 26699436
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctttct-ccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||||| ||||||||||||  | | ||||||||| ||| |||||||||||||| ||||| | | ||| |||||||||  |||    
T  26699560 gttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcattgtt 26699461  T
Q  97 ggaccgaactgggtaatcatttctt 121  Q
    ||||||||||||||||  |||||||    
T  26699460 ggaccgaactgggtaaaaatttctt 26699436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 48142495 - 48142181
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgata--gtggattggagagataaatctttctccatagtaggtcaagtt 96  Q
    |||||||||| ||||||||||| | | | |||||||||   | |||||||||||||  || |||| || |||| ||||| || | | |||||||||| ||    
T  48142495 gttgaagctagtttcttgtaacccttgtatatctctttgtaaagaactcattgatatagtagatttgaaagatcaatctctccctacagtaggtcaattt 48142396  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||  || || ||||| ||||| ||||||| ||||||||||||||||| |||||||||| |||||||||     ||||||| |||||| ||| ||||       
T  48142395 ggagagagctaggtaaacattttttggtgtgtttgtttctcttctctctttatcttttgattgtggtttaatgtttttcac-ttgattcctagatta--- 48142300  T
Q  197 ctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttga 296  Q
     | | | |||||||| ||| | ||| |||   || |||| |||||||||||||||||||| ||||||||||||||  ||||| |||||||| | || |      
T  48142299 -ttgttgttgttattgttgctgttgtttgatgttactttaatattggttattactttcctttgctccacacatctaagtttt-attggtgtgatttattt 48142202  T
Q  297 atccgaattcacaataaattg 317  Q
    |||| ||||||||||| ||||    
T  48142201 atcctaattcacaatacattg 48142181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 12745546 - 12745478
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  12745546 ctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatct 12745478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12747869 - 12747798
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    |||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||| |||||    
T  12747869 aagctaatttcttgtaacccatttgtatctatttgtatgaactcattgatagtggattggagagatcaatct 12747798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 29056496 - 29056610
Alignment:
Q  85 gtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgatt 184  Q
    ||||||| | || |||||||||| |||| || |||||||||| |||||||||||| |||| |||||||||| |||||||||||   ||||||| ||||||    
T  29056496 gtaggtccattttgaccgaactgtgtaaacacttcttggtgtgtttgtttctcttttctctttatcttttgtttgtggttttgtgtttttcac-ttgatt 29056594  T
Q  185 actaaattagatctag 200  Q
     ||| |||||||||||    
T  29056595 cctagattagatctag 29056610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 310
Target Start/End: Original strand, 5349964 - 5350266
Alignment:
Q  4 gaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccatagtaggtcaa-gttggac 100  Q
    |||||||||| |||||| ||| |||||||||||||   | |||||| |||||| || |  ||||||||   ||| || ||| |||||||||  |||||||    
T  5349964 gaagctaattccttgtagctcgtttgtatctctttgtaaagaactcgttgataatgaagcggagagatc--tctctccccagagtaggtcattgttggac 5350061  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
     ||| ||||||| ||||| ||||||| ||||||||||||||||| |||||||||| |||| || |||   ||||||| |||||| ||  || ||||||||    
T  5350062 tgaattgggtaaacatttattggtgtgtttgtttctcttctctcgttatcttttgtttgtagtcttgtgtttttcac-ttgattcctgtatgagatctag 5350160  T
Q  201 gtattgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    || |||||||| ||||| || | || ||||   ||| |||||||||| ||||||||| | || |||||| ||  ||||  |||||||| || ||||| ||    
T  5350161 gt-ttgttattgttgttgttacgtgatgtt--attttatattggttactactttcctttacttcacacacctaagttt--attggtgtgagatttgagtc 5350255  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  5350256 cgaattcacaa 5350266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 12119591 - 12119719
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctttctccatagtaggtca-agttgg 98  Q
    ||||||||||||||||||||| | ||||||||||||  | | ||||||||| |||||||||||||||||| ||||| || | | |||||||||  |||||    
T  12119591 ttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcccaagagtaggtcattgttgg 12119690  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    |||||||| ||| ||  ||||||||||||    
T  12119691 accgaactaggtgaacaatttcttggtgt 12119719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 31495428 - 31495296
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||||||||| ||| |||||||||||  | ||||||||||||||| |||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  31495428 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccg 31495329  T
Q  103 aactgggt-aatcatttcttggtgtatttgttt 134  Q
    |||||||| ||  || ||||||||| |||||||    
T  31495328 aactgggtgaacaatctcttggtgtctttgttt 31495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 22882868 - 22882715
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| | ||||||||||||  | | |||||||||| ||||||||| |||| || |||| | | ||  |||||||||  ||||    
T  22882868 gttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatc-tcccccggagtaggtcattgttg 22882770  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctt 152  Q
    ||||||||||| ||| |||||||||||||  || ||||| | ||||| |||||||    
T  22882769 gaccgaactggataaacatttcttggtgttattttttctatactctctttatctt 22882715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 22934532 - 22934379
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| | ||||||||||||  | | |||||||||| ||||||||| |||| || |||| | | ||  |||||||||  ||||    
T  22934532 gttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatc-tcccccggagtaggtcattgttg 22934434  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctt 152  Q
    ||||||||||| ||| |||||||||||||  || ||||| | ||||| |||||||    
T  22934433 gaccgaactggataaacatttcttggtgttattttttctatactctctttatctt 22934379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 3913782 - 3913878
Alignment:
Q  149 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 248  Q
    |||||| |||||||||||  |||||||||||||||| ||| ||||||| ||| |   | | |||||||| |||||||||||| |||||||||||||||||    
T  3913782 tcttttacttgtggttttatacttttcactttgattcctagattagatatagat---gctcttattgttattgcttgtgtttactttgatattggttatt 3913878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 13009550 - 13009453
Alignment:
Q  12 tttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactg 107  Q
    ||||||||||  |||||||||| |||| || ||||||||||||||||||||||||||||  |||| | ||||| | ||||||||||| ||||||||||    
T  13009550 tttcttgtaaaacatttgtatccctttgtaagaactcattgatagtggattggagagatcgatctctcctccaaattaggtcaagttagaccgaactg 13009453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 8393448 - 8393557
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcatt-gatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgga 99  Q
    |||||||||||||||||| | |||||||| |||||  | ||||||||| |||||||||||||||||   ||||| | ||||| ||||||||||| |||||    
T  8393448 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 8393546  T
Q  100 ccgaactgggt 110  Q
    |||||||||||    
T  8393547 ccgaactgggt 8393557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 8395657 - 8395766
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcatt-gatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgga 99  Q
    |||||||||||||||||| | |||||||| |||||  | ||||||||| |||||||||||||||||   ||||| | ||||| ||||||||||| |||||    
T  8395657 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 8395755  T
Q  100 ccgaactgggt 110  Q
    |||||||||||    
T  8395756 ccgaactgggt 8395766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 39593754 - 39593647
Alignment:
Q  94 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    |||||||  ||||||||||  | |||||||||| ||||| |||| ||||| ||||||||||||||| |||||||  |||||   |||| || ||| ||||    
T  39593754 gttggactaaactgggtaaataattcttggtgtgtttgtgtctcctctcttcttatcttttgcttgcggttttgtgcttttacatttggtttctagatta 39593655  T
Q  194 gatctagg 201  Q
    ||||||||    
T  39593654 gatctagg 39593647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21688300 - 21688374
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt-ttaggaactcattgatagtggattggagagataaatc 74  Q
    |||||| ||||||| ||||||||||||||||||||||   | ||||||||||||| || ||||||||||| ||||    
T  21688300 gttgaaactaattttttgtaactcatttgtatctcttcggaagaactcattgataatgaattggagagatcaatc 21688374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 28468761 - 28468811
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  28468761 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 28468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 41639315 - 41639352
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctctttt 39  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  41639315 ttgaagctaatttcttgtaacccatttgtatctctttt 41639352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 24741800 - 24741765
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||||||||||||||||||||||||| |||||    
T  24741800 tgctccacacatctttgttttcattggtgtgagttt 24741765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 29999708 - 29999653
Alignment:
Q  232 ctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  29999708 ctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 29999653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 37755034 - 37754908
Alignment:
Q  43 aactcattgatagtggattggagagataaatctttctcc-atagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttc 140  Q
    |||||||||||| ||| ||| |||||| ||||| || || ||||||||| |  ||| |||  |||||| |||  ||||||| |||| ||||||| |||||    
T  37755034 aactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgttagactaaactggataaatatttcttagtgtgtttgtttttcttc 37754935  T
Q  141 tctccttatcttttgcttgtggttttg 167  Q
    |||| ||||||| || |||||||||||    
T  37754934 tctctttatcttatgtttgtggttttg 37754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 31985871 - 31985917
Alignment:
Q  262 ccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||    
T  31985871 ccacacatctttgtttacattggtgtgagttttg--tccgaattcacaa 31985917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32091529 - 32091566
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  32091529 gttgaaactaatttcttgtaactcttttgtatctcttt 32091566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 34496057 - 34496086
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  34496057 tgctccacacatctttgttttcattggtgt 34496086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34788892 - 34788855
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  34788892 gttgaagttaatttcttgtaactcttttgtatctcttt 34788855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 55085482 - 55085445
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||||||||||||||||||  |||||||||||||||    
T  55085482 gttgaagctaatttcttgtaaaccatttgtatctcttt 55085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 1983515 - 1983562
Alignment:
Q  239 attggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||| ||||    
T  1983515 attgattattactt-cctttgctccacacatctttgttttcatttgtgt 1983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 538076 - 538389
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||||||| ||||| || || ||| |||||||||||||    
T  538076 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtcaagttgg 538175  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||| | | || |  ||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  538176 accgaactggatcaacaatctttggtgtgtttctttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 538275  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    || | |||||||||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||| | ||||  |||||||| |||||||| |    
T  538276 agatgttgttattattgttgttgcttgtgtttactttgaaattggttattactttcctttgctccacacatcatagtttatattggtgtgagttttgagt 538375  T
Q  299 ccgaattcacaata 312  Q
    | ||||||||||||    
T  538376 ctgaattcacaata 538389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 42428547 - 42428237
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || ||| |||||||||||||    
T  42428547 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttgg 42428448  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  || |||| ||||||  ||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42428447 accgaactgggtcaacaatctttagtgtgtttgttcttcttttctctccctttatcttttgcttgtggttttgagcttttcactttgattactagattag 42428348  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| ||||||||||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||    
T  42428347 atctaggtgttgttattattattgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagtttt 42428248  T
Q  295 gaatccgaatt 305  Q
    || | ||||||    
T  42428247 gagttcgaatt 42428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 20 - 310
Target Start/End: Original strand, 42926961 - 42927258
Alignment:
Q  20 aactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggaccgaactgggtaatcatt 117  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  42926961 aactcatttgtatctctttgtaagaactcattgacagtggattgaagaaataaatctctctctcatagtaggtcaagttggaccgaactgggtaaacatt 42927060  T
Q  118 tcttggtgtatttgtttctcttctctccttat------cttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttatt 211  Q
    ||||||||| |||||||||||| |||||||||      |||||||||||||||||||  |||||||||||||| ||| ||||||||||||| ||||||||    
T  42927061 tcttggtgtgtttgtttctcttatctccttatcttttgcttttgcttgtggttttgagtttttcactttgattcctagattagatctaggtgttgttatt 42927160  T
Q  212 attgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
     ||||| |||||||||||| |||||||||| |||  ||||||||| |||||||||||||||||||||| ||||| | | |||||| | |||||||||||    
T  42927161 gttgttgttgcttgtgtttactttgatattagttgctactttcctttgctccacacatctttgttttcgttggtatga-ttttgagttcgaattcacaa 42927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 42426352 - 42426030
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttgg 98  Q
    |||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  42426352 gttgaagctaatttcttgcaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccctgattaggtcaagttgg 42426253  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    || ||||| ||| | || |  || |||| ||||||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42426252 actgaactaggtcaacaatcttttgtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattactagattag 42426153  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| |||||||||||| | |||||||||||  ||||||||||||||| ||||||| | ||||||||||||| | ||||  ||| |||| ||||||    
T  42426152 atctaggtgttgttattattgatgttgcttgtgttcactttgatattggttactactttcttttgctccacacatcatagtttgtatttgtgtgagtttt 42426053  T
Q  295 gaatccgaattcacaataaattg 317  Q
    || | ||||||||||| ||||||    
T  42426052 gagttcgaattcacaacaaattg 42426030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13488254 - 13488567
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  13488254 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccgagattaggtcaagttgg 13488353  T
Q  99 accgaactgggt-aatcatttcttggtgtatttgtt--tctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||||||| ||| || | ||| ||| ||||||  |||||||||||| | ||||||||||||||||||||  |||||||||||||||||| ||||||    
T  13488354 accgaactgggtcaataatcttttg-tgtctttgttcctctcttctctccctttcttttgcttgtggttttgagtttttcactttgattactagattaga 13488452  T
Q  196 tctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    ||||||| |||||||||||| | ||| |||||||  |||||| |||||||||||||||||| | ||||||||||| |  |||  |||||||| || ||||    
T  13488453 tctaggtgttgttattattgctattgattgtgttcactttgaaattggttattactttcctttactccacacatcatattttgtattggtgtgagatttg 13488552  T
Q  296 aatccgaattcacaa 310  Q
    | |||||||||||||    
T  13488553 agtccgaattcacaa 13488567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 533820 - 534125
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||| |||| ||||| || || ||| |||||||||||||    
T  533820 gttgaagctaattttttgtaacccatttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcccccatattaggtcaagttgg 533919  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| |||| |||||||||||  |||||||||||||||||||||||  |||||||||||||||||| ||      |    
T  533920 accgaactgggtcaacaatctttggtgtctttgcttctcttctctttttatcttttgcttgtggttttgagattttcactttgattactagat------t 534013  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||||||| || |||||||||| | |||||| |||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |    
T  534014 aggtgttgttattattattgttgcttgtgtctactttgaaattggttactactttcctttgctccacacatcatagtttctattggtgtgagttttgagt 534113  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  534114 ccgaattcacaa 534125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 13239802 - 13240078
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||| || |    
T  13239802 gttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaaatttg 13239901  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || || ||||||| |||||||||||  |||||||||  ||||||||||||||||||||   |||||||||||||||||| ||||    
T  13239902 gaccgaactgggtgaacaatttttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgtttttcactttgattactagatta 13240001  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||| |||||||| ||||| |||||||||||| |||| | |||||||| ||||||||| | |||||||||||    
T  13240002 gatctaggtgttgttattgttgttgttgcttgtgtttactttaaaattggttactactttcctttactccacacatc 13240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 8566059 - 8565750
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| || | || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  8566059 aagctaatttcttgtaacccatttgtatccctctgtaagaactcattgatagtggattggagagatcaatctctcacccagattaggtcaagttggaccg 8565960  T
Q  103 aactgggtaatcatttcttggtgtatttgttt-ctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    |||| ||| | || | |||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  8565959 aactaggtcaacaat-cttggtgtgtttgttttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctagg 8565861  T
Q  202 tattgttat---tattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    | |||||||   ||||||| |||||||||||  ||||| ||||||||| ||||||||| ||||||||||||| | ||||  ||| |||| | ||||||||    
T  8565860 tgttgttattattattgttgttgcttgtgttcactttgttattggttactactttcctttgctccacacatcatagtttatattagtgtga-ttttgaat 8565762  T
Q  299 ccgaattcacaa 310  Q
    || |||||||||    
T  8565761 ccaaattcacaa 8565750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 312
Target Start/End: Original strand, 32636879 - 32637192
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  32636879 aagctaatttcttgtaacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccg 32636978  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| |||||||||||  || ||||  ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||    
T  32636979 aactgggtcaacaatctttggtgtgtttgtttctctcttccctccctttatcttgtgcttgtgattttgagtttttcactttgattactagattagatct 32637078  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||||| | ||||||||||||  | ||| ||| |||| ||||||||| | ||||||||||| | ||||  |||||||| ||||||||||    
T  32637079 aggtgttgttattattgatgttgcttgtgtttagtgtgaaatttgttactactttcctttactccacacatcatagtttgtattggtgtgagttttgaat 32637178  T
Q  299 ccgaattcacaata 312  Q
    ||||||||||||||    
T  32637179 ccgaattcacaata 32637192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 16452131 - 16452403
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||| || || | |||||||||||||||    
T  16452131 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattcatagtggattggagagataaatctctcccccagagtaggtcaagttgg 16452230  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctc-tcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| |||||   | |||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  16452231 accgaactgggtaaacatttcttggtgtgtttgtttatcttctcttcctttatttttttgcttgtggttttgagcttttcaatttgattcctagattaga 16452330  T
Q  196 tctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatct 271  Q
    ||||   | |||| |||||||| |||||||||||| | || |||||||||| || |||||| | ||||||||||||    
T  16452331 tcta---actgttgttattgttgttgcttgtgtttacgttaatattggttactattttcctttactccacacatct 16452403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 28750772 - 28750457
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||| ||||||| |||||| ||||||||||| ||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  28750772 gttgaagttaatttcctgtaacccatttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 28750673  T
Q  99 accgaactgggt-aatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    |||||| ||||| ||| || | ||||||| ||||||  ||||||||||||  |||| |||||||||||||||||  |||||||||| |||||||| ||||    
T  28750672 accgaattgggtcaataatct-ttggtgtgtttgttcctctcttctctccctttatattttgcttgtggttttgtgcttttcacttggattactagatta 28750574  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||| |||||||||||||| |||||||||||| |||| | |||||||| ||||||||| ||||||||||||| |  |||  |||||||| |||||    
T  28750573 gatctaggtgttgttattattgttgttgcttgtgtttactttaaaattggttactactttcctttgctccacacatcataatttgtattggtgtgagttt 28750474  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| ||| |||||||||    
T  28750473 tgagtccaaattcacaa 28750457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 9 - 310
Target Start/End: Original strand, 31183031 - 31183339
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaact 106  Q
    |||||||||||||| |||||||||| |||| || ||||||||||||| ||||||||||||||  |||| || || ||| |||||||||||||||||||||    
T  31183031 taatttcttgtaac-catttgtatccctttgtaagaactcattgatactggattggagagatctatctctcccccatattaggtcaagttggaccgaact 31183129  T
Q  107 gggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttg-----cttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    |||| | ||||  ||||||| |||||||||||  |||||| ||||||||||     ||||||||||||| ||||||||||||||||||| ||||||| ||    
T  31183130 gggtcaacattctttggtgtgtttgtttctctcttctctctttatcttttgaattgcttgtggttttgagcttttcactttgattactagattagatata 31183229  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| ||||||||||| || |||||||||||  |||||||||| |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||    
T  31183230 ggtgttgttattatttttgttgcttgtgttccctttgatattagttactactttcctttgctccacacatcatggtttgtattggtgtga-ttttgagtc 31183328  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  31183329 cgaattcacaa 31183339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 33831735 - 33832044
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||| ||||| || || ||| ||||||||||||||| |    
T  33831735 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccatattaggtcaagttggactg 33831834  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaactttt-cactttgattactaaattagatcta 199  Q
    |||||||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||| ||||| ||||| |||||||||| ||| ||||||| ||    
T  33831835 aactgggtcaacaatctttggtgtttttgtttctctcttctctctttatcttttgcttgtggctttgagctttttcactttgattcctagattagattta 33831934  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    |||  || |||| ||||| |||||||||||  ||||||| ||||||| ||||||||| ||||||||||||| | ||||  ||| |||||| |||||| ||    
T  33831935 ggtgctgctattgttgttattgcttgtgttcactttgattttggttactactttcctttgctccacacatcatagtttgtatttgtgtaa-ttttgagtc 33832033  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  33832034 cgaattcacaa 33832044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 37439200 - 37439467
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaac 105  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||||||    
T  37439200 taatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaac 37439299  T
Q  106 tgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||| | || |  ||||||| |||||||||||  |||||||  ||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||    
T  37439300 tgggtgaacaatctttggtgtgtttgtttctctcttctctccctttatcttatgcttgtggttttgtgcttttcattttgattactagattagacctagg 37439399  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    | |||||||||||||| |||||||||||| |||||| |||||||| ||| ||| | |||||||||||||    
T  37439400 tgttgttattattgttgttgcttgtgtttactttgaaattggttactac-ttcttttgctccacacatc 37439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 39468666 - 39468350
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||| ||||| || || ||| ||||| || ||||    
T  39468666 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggttaaattgg 39468567  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    || ||||||||| | || |  || |||| ||||||  ||||||||||||  ||||||| |||| |||||||||  ||||||||||||||| ||| |||||    
T  39468566 actgaactgggtcaacaatctttagtgtgtttgttcctctcttctctccctttatcttgtgctcgtggttttgtgcttttcactttgatttctagattag 39468467  T
Q  195 atctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||| |||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||||||||    
T  39468466 atctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtaagttt 39468367  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| | |||||||||||    
T  39468366 tgagttcgaattcacaa 39468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 30683041 - 30682724
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaa--ctcattgatagtggattggagagataaatctttctcc-atagtaggtcaagtt 96  Q
    |||||||||||||||||||||| | ||||||| ||||| || |||  ||||||||||||||||||||||||| ||||| || || | | |||||||||||    
T  30683041 gttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtcaagtt 30682942  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatt 192  Q
    ||||||||||||  ||  || | ||||||| ||||||  ||||||||||||||  ||||||||||||||  ||||  ||||||||||||||| ||| |||    
T  30682941 ggaccgaactggtcaacaatct-ttggtgtgtttgttcctctcttctctccttttatcttttgcttgtgaatttgtgcttttcactttgattcctagatt 30682843  T
Q  193 agatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagt 291  Q
    |||||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| |||    
T  30682842 agatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagt 30682743  T
Q  292 tttgaatccgaattcacaa 310  Q
    ||||| |||| ||||||||    
T  30682742 tttgagtccgtattcacaa 30682724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 36074155 - 36073867
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  36074155 aagctaatttcttgtaactcttttgtatctctttgaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggaccg 36074056  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||| | | || |  ||||||| ||||||  ||||||||||||  |||| |||||||||| | ||||  ||||||||||||||| ||| |||||||||    
T  36074055 aactggatgaacaatctttggtgtgtttgtttctctcttctctccttttatgttttgcttgt-gatttgtgcttttcactttgattcctagattagatct 36073957  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||  ||||||| ||| || |||||||  ||  ||||| ||||||||||||||||||| ||||||||||||| | ||||  ||||||||    
T  36073956 aggtgctgttattgttgattattgcttgcattcactttgttattggttattactttcctttgctccacacatcatagtttgtattggtgt 36073867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 310
Target Start/End: Original strand, 19806456 - 19806727
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtt--tctct 138  Q
    |||||| ||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | || |  |||| || ||||||  |||||    
T  19806456 gaactccttgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggggtgtttgttcctctct 19806555  T
Q  139 tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttg 236  Q
    |||||||  ||||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||| |||||||||||| | |||| | ||||  ||||     
T  19806556 tctctccctttatcttttgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattgctattgcctatgttcacttta 19806655  T
Q  237 atattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    | |||||||| ||||||||| ||| ||||||||| | ||||  |||||||  |||||||| |||||||||||||    
T  19806656 aaattggttactactttcctttgccccacacatcatagtttgtattggtg--agttttgagtccgaattcacaa 19806727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 13343116 - 13343387
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||  | ||||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||| | ||||||||    
T  13343116 aagctaatttcttgtaatccttttgtatctctttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggaccg 13343215  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||| ||| ||||||  ||||||||||||  |||| |||||||||||| ||||  ||||||||||||||| ||| |||||||||    
T  13343216 aactgggtgaacaatctttgatgtgtttgtttctctcttctctccttttatattttgcttgtgg-tttgtgcttttcactttgattcctagattagatct 13343314  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||| |||||||| ||| || |||||||  ||  ||||| ||||||||| ||||||||| |||||||||||||    
T  13343315 aggtgttgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatc 13343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 25412815 - 25413087
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||     
T  25412815 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggact 25412914  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  |||||| |||||||| ||| |||||||     
T  25412915 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgg-tttgtgcttttctctttgattcctagattagata 25413013  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||  ||||||| ||| || ||||||||| |  ||| ||||||| ||| || |||||| |||||||||||||    
T  25413014 taggtgctgttattgttgattattgcttgtgctcacttggatattgattactaatttcctttgctccacacatc 25413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 310
Target Start/End: Complemental strand, 5887464 - 5887237
Alignment:
Q  86 taggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgctt--gtggttttgaacttttcactttg 181  Q
    ||||||||||||||||||| ||| | | || |  ||||||| |||||||||||  |||||| |||||||||||||  |||||||| |  |||||| ||||    
T  5887464 taggtcaagttggaccgaattggatcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttttgtggttttaagtttttcattttg 5887365  T
Q  182 attactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcat 281  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||| ||| | ||||  ||    
T  5887364 attactagattagatttaggtgttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacatatcatagtttgtat 5887265  T
Q  282 tggtgtaagttttgaatccgaattcacaa 310  Q
    |||||| | |||||| |||||||||||||    
T  5887264 tggtgtga-ttttgagtccgaattcacaa 5887237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 90 - 270
Target Start/End: Complemental strand, 16649856 - 16649676
Alignment:
Q  90 tcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaa 189  Q
    |||||||||||| |||| ||| | || | |||||||| |||||||||||| ||   ||||||||||||||||||||||  |||||||||||||||||||     
T  16649856 tcaagttggaccaaactaggtcaacaatccttggtgtgtttgtttctcttttccgtttatcttttgcttgtggttttgtgcttttcactttgattactag 16649757  T
Q  190 attagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||||||| |||||||||||| |  | ||||||||  |||||||  |||||| ||||||||| |||||||||||||    
T  16649756 attagatctaggtgttgttattattgctactacttgtgttcactttgattgtggttactactttcctttgctccacacatc 16649676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40147312 - 40147423
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  40147312 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 40147411  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  40147412 accgaactgggt 40147423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 9049459 - 9049210
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||   ||||||||||||| || ||||||||||| |||||||||||||||| ||| | || || | ||||||| |||||||    
T  9049459 gttgaagctaatttcttgtaaccattttgtatctctttgtaagaactcattgacagtggattggagagatcaatatctcccccaaagtaggtgaagttgg 9049360  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||| ||| ||| ||||| ||||||| |||||||||||||      |||||||||||||||||||||   ||||||| || ||| ||| ||||||| |    
T  9049359 accgaaatggataaacattttttggtgtgtttgtttctcttc------tatcttttgcttgtggttttgtgtttttcac-ttaatttctatattagattt 9049267  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcct 256  Q
    || | |||||||| ||||| || |||||| || ||||||||||||||| || ||||||    
T  9049266 agat-ttgttattgttgttgtttcttgtggttactttgatattggttactattttcct 9049210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 13695804 - 13695639
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggacc 101  Q
    |||||||||||||||||| | |||||||||||||   | ||||||||| |||||||||| ||||||| | ||| || ||||||||||||||| |||||||    
T  13695804 aagctaatttcttgtaacccttttgtatctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtaggtcaacttggacc 13695705  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
     |||| ||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||    
T  13695704 aaactaggtaaacatttcttggtgtgtttgtttctcttctctctttatcctttgcttgttgttttg 13695639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 28278367 - 28278504
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  28278367 gttgaagctaatttcttgtaacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 28278466  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttct 136  Q
    |||||||||||| | || |||||||||| ||| |||||    
T  28278467 accgaactgggtgaacaattcttggtgtgtttctttct 28278504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 213520 - 213644
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||    
T  213520 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggacc 213619  T
Q  102 gaactgggtaatcatttcttggtgt 126  Q
    ||||||||| | |||||||||||||    
T  213620 gaactgggtgaacatttcttggtgt 213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 30182643 - 30182915
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||| |||||||||  | |||||||||||||||||||||||||| | ||||| || |||| |||| |||||||| |||||    
T  30182643 aagctaatttcttgtaacccttttctatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggacc 30182742  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||| | | || |  ||||||| |||||||||||  |||||||||  ||||| |||||||| |||||  |||||||||||| || ||| ||||||||    
T  30182743 gaactggatgaacaatctttggtgtgtttgtttctctcttctctccttttatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatc 30182841  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||| |||||||| ||| || ||| |||  ||  ||||| ||||||||| ||||||||| |||||||||||||    
T  30182842 taggtgttgttattgttgattattgtttgcattcactttgttattggttactactttcctttgctccacacatc 30182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5058096 - 5058223
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||| ||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | |||||||||||||||    
T  5058096 gttgaagctattttcttgtatcccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagttgg 5058195  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  5058196 accgaactgggtgaacatttcttggtgt 5058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 3075773 - 3075627
Alignment:
Q  3 tgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttggac 100  Q
    |||| ||||||||||||||| ||||||||||| ||| || ||| || ||||||||| ||||||||||| ||||| || | ||||||||||||||||||||    
T  3075773 tgaatctaatttcttgtaacccatttgtatctttttgtaagaattcgttgatagtgaattggagagatcaatctctccctcatagtaggtcaagttggac 3075674  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctcttctctcctt 147  Q
    | || ||||| | ||||||||||||| ||||||||||||||||||||    
T  3075673 caaattgggtgaacatttcttggtgtgtttgtttctcttctctcctt 3075627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 26177939 - 26178215
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  26177939 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 26178038  T
Q  104 actgggt-aatcatttc-ttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||| ||  || || ||||||| |||||||  |||||  ||||||  ||||||| ||||||| |||||   ||||||||||||||| ||| ||||||    
T  26178039 actgggtgaacaatctctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgt-gttttatgcttttcactttgattcctagattaga 26178137  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctt 272  Q
    ||||||| ||||||| |||| || |||||||      ||||| || |||||| ||||||||| |||||||||||||||    
T  26178138 tctaggtgttgttatcattgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatctt 26178215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 270
Target Start/End: Original strand, 16409532 - 16409806
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  16409532 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 16409631  T
Q  104 actgggt-aatcatttc-ttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||| ||  || || ||||||| |||||||  |||||  ||||||  ||||||| ||||||| |||||   |||||||||||| || ||| ||||||    
T  16409632 actgggtgaacaatctctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgt-gttttatgcttttcactttgtttcctagattaga 16409730  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||| |||||||| ||| || |||||||      ||||| || |||||| ||||||||| |||||||||||||    
T  16409731 tctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatc 16409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 9789335 - 9789229
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  9789335 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 9789236  T
Q  104 actgggt 110  Q
    |||||||    
T  9789235 actgggt 9789229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16641054 - 16640930
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    ||||||||| ||||||  |||||| ||||||||||||| || |||||   |||||||||||||||||||| ||||| || |||| |||||||||||| ||    
T  16641054 gttgaagctgatttctgataactcttttgtatctctttgtaagaact---tgatagtggattggagagatcaatctctcctccagagtaggtcaagtagg 16640958  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
     ||||||||||||| |||||||||||||    
T  16640957 gccgaactgggtaaacatttcttggtgt 16640930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 18441759 - 18441653
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||| | ||||||||||| |||||||||    
T  18441759 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccga 18441660  T
Q  104 actgggt 110  Q
    |||||||    
T  18441659 actgggt 18441653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 27015597 - 27015701
Alignment:
Q  24 catttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttctt 121  Q
    ||||||||||||||| || ||||||||||||||||||||| | |||| ||||| || |||| | ||||||||||||||||||||||||| | ||||| ||    
T  27015597 catttgtatctctttgtaagaactcattgatagtggattgtacagatcaatctctcctccaaaataggtcaagttggaccgaactgggtgaacatttttt 27015696  T
Q  122 ggtgt 126  Q
    |||||    
T  27015697 ggtgt 27015701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38747056 - 38747167
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||||||||||||  |  ||||||||||||| ||||||||||||| ||||| || | || |  ||||||||||||    
T  38747056 gttgaagctaatttcttgtaacccatttgtatctctttggaaaaactcattgatagaggattggagagatcaatctctccctcagatcaggtcaagttgg 38747155  T
Q  99 accgaactgggt 110  Q
    ||| ||||||||    
T  38747156 accaaactgggt 38747167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 3075629 - 3075551
Alignment:
Q  232 ctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||||  |||||||| |||||| | |||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaa 3075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42310052 - 42309947
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||| | ||||| ||||| | | ||||||||| | ||||| |    
T  42310052 gttgaagctaatttcttgtaactcttttgtatctctttgtaagaacttattgatagtggattagcgagatcaatctctcccccatagtagattaagtttg 42309953  T
Q  99 accgaa 104  Q
    ||||||    
T  42309952 accgaa 42309947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 27637723 - 27637602
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccga 103  Q
    ||||||||||||||| ||||| |||||||||| || ||||||||| |||||||||||||||||| ||||| || | || |||||||||  ||||||||||    
T  27637723 ctaatttcttgtaacccattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccga 27637625  T
Q  104 actgggtaatcatttcttggtgt 126  Q
    ||||||| |  ||||||||||||    
T  27637624 actgggtgaatatttcttggtgt 27637602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 210
Target Start/End: Original strand, 26170855 - 26171032
Alignment:
Q  42 gaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt-aatcatttc-ttggtgtatttgttt--c 135  Q
    |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||||||||| ||  || || ||||||| |||||||  |    
T  26170855 gaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcc 26170954  T
Q  136 tctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttat 210  Q
    ||||  ||||||  ||||||| ||||||| |||||   ||||||| ||||||| ||| ||||||||||||| |||||||    
T  26170955 tcttccctctccttttatcttgtgcttgt-gttttatgcttttcattttgattcctagattagatctaggtgttgttat 26171032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 42309931 - 42309827
Alignment:
Q  204 ttgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaa 303  Q
    ||||| |||||||| ||||||||| || || |||||| |||||| |||||||| |||| || |||||||||||||||||| ||| | |||||| ||| ||    
T  42309931 ttgttgttattgttgttgcttgtgattactatgatataggttatcactttcctttgctgcatacatctttgttttcattgatgtga-ttttgagtcctaa 42309833  T
Q  304 ttcaca 309  Q
    ||||||    
T  42309832 ttcaca 42309827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 10593312 - 10593446
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcatt-gatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgga 99  Q
    |||||||||||||||||| | |||||||| |||||  | ||||||||| |||||||||||||||||   ||||| | ||||| ||||||||||| |||||    
T  10593312 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 10593410  T
Q  100 ccgaactgggt-aatcatttcttggtgtatttgttt 134  Q
    ||||||||||| ||  || |||||||||||||||||    
T  10593411 ccgaactgggtgaacaatctcttggtgtatttgttt 10593446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42926918 - 42926968
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcatt 50  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  42926918 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcatt 42926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 30897563 - 30897631
Alignment:
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggtttt 166  Q
    |||||||| |||||| ||||||||||||| ||||||||| || ||||  ||||||||||||||| ||||    
T  30897563 gaccgaacagggtaaacatttcttggtgtgtttgtttctgttttctctctatcttttgcttgtgatttt 30897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 29751270 - 29751165
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||    
T  29751270 ctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccga 29751172  T
Q  104 actgggt 110  Q
    |||||||    
T  29751171 actgggt 29751165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 316813 - 316942
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatctttctcc-atagtaggtca-agtt 96  Q
    |||||||||||||||||||||  | ||||||||||||  | | ||||||||||||| ||||| |||| ||| ||||| || || | |||||||||  |||    
T  316813 gttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggtcattgtt 316912  T
Q  97 ggaccgaactgggtaatcatttcttggtgt 126  Q
    |||||||||| ||||| || ||||| ||||    
T  316913 ggaccgaacttggtaaacaattctttgtgt 316942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 22536403 - 22536295
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| ||||||||||||||| |||   ||||| | ||||| ||||||||||| ||||||    
T  22536403 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtcaagtttggac 22536305  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  22536304 cgaactgggt 22536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 30793282 - 30793340
Alignment:
Q  94 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctt 152  Q
    ||||||||||||  ||||| ||||||||||||| ||||||||||| ||||| |||||||    
T  30793282 gttggaccgaacaaggtaaacatttcttggtgtgtttgtttctctactctctttatctt 30793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 33906145 - 33906024
Alignment:
Q  4 gaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaa-gttgga 99  Q
    |||||||| |||||||||  | |||||||||||||   | ||||||||||||||| ||||||| |||| ||||| ||| | | |||||||||| ||||||    
T  33906145 gaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggtcaatgttgga 33906046  T
Q  100 ccgaactgggtaatcatttctt 121  Q
    |||| |||||||| || |||||    
T  33906045 ccgagctgggtaaacaattctt 33906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 15464395 - 15464345
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  15464395 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 15464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 3325964 - 3326130
Alignment:
Q  1 gttgaagctaatttcttgtaactcatt-tgtatctctt--ttaggaactcattgatagtggattggagagataaatctttctc-catagtaggtca-agt 95  Q
    |||||||||||||||||||||| |||| ||||||||||  | | ||||||| |||| ||||||| ||||||| ||| | |||| ||||||||||||  ||    
T  3325964 gttgaagctaatttcttgtaac-cattgtgtatctctttgtaaagaactcaatgatggtggattagagagatcaatatctctcacatagtaggtcattgt 3326062  T
Q  96 tggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggtttt 166  Q
    |   |||||||||||||  |||| ||||||| ||  ||||||||||||  |||||||||| ||||| ||||    
T  3326063 ttcgccgaactgggtaaatattttttggtgtgtt--tttctcttctct-tttatcttttgtttgtgatttt 3326130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 29720422 - 29720552
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||| | ||||||||||| |||||||||    
T  29720422 ctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccga 29720520  T
Q  104 actgggt-aatcatttcttggtgtatttgttt 134  Q
    ||||||| ||  || ||||||||| |||||||    
T  29720521 actgggtgaacaatctcttggtgtctttgttt 29720552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 29722582 - 29722712
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtc-aagttggaccga 103  Q
    ||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||||| |||||||| || |||||||||    
T  29722582 ctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccga 29722680  T
Q  104 actgggt-aatcatttcttggtgtatttgttt 134  Q
    ||||||| ||  || ||||||||| |||||||    
T  29722681 actgggtgaacaatctcttggtgtctttgttt 29722712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 24135711 - 24135661
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||| ||||||||    
T  24135711 tgctccacacatctttattttcattggtgtgagtttt--atccggattcacaa 24135661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10054933 - 10054867
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggaga 66  Q
    ||||||||||||||||| |||| | |||||||||||||   | |||||||||||||||| ||||||||    
T  10054933 gttgaagctaatttcttataac-cttttgtatctctttgtaatgaactcattgatagtgtattggaga 10054867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 35387526 - 35387490
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  35387526 tgctccacacatctttgtttacattggtgtgagtttt 35387490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 40147556 - 40147608
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  40147556 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 40147608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 16455672 - 16455982
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||||||||||| ||||| ||||| ||||| |||||| ||||    
T  16455672 gttgaagctaatttcttgtaacccatttgtatctctgtgtaagaactcattgatagtggattggagagatcaatctctctcccatagtcggtcaaattgg 16455771  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||| | |||||||||    
T  16455772 accaaactgtgtaaacatttcttggtgtatttgtttctcttctctctttatcttttacttgtggttttgagtttttcactttgattaccagattagatct 16455871  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |  | |||||||||||||| ||||||  |||| ||||||||||||||| ||||||| | |||| |||| |||||||||||||||||||||| |||||| |    
T  16455872 atatgttgttattattgttgttgcttacgtttactttgatattggttactactttcatttgctacacaaatctttgttttcattggtgtaa-ttttgagt 16455970  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  16455971 ccgaattcacaa 16455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 23555382 - 23555073
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||    
T  23555382 gttgaaactaatttcttataactcatttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctccccatagtaggtcaagttgga 23555283  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
     ||||||| |||| ||||||||||||  ||||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  23555282 tcgaactgagtaaacatttcttggtgcgtttgtttctcttctctctttatgttttgcttgtggttttgagcttttcactatgattcctaaattagatcta 23555183  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| |||||||| ||||| |||||||||||| |||||| |||| ||| |||||| || ||||||||||||| ||||||  |||||||  | |||||| ||    
T  23555182 ggtgttgttattgttgttgttgcttgtgtttactttgacattgattactacttttctttgctccacacatcattgtttctattggtgcga-ttttgagtc 23555084  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  23555083 cgaattcacaa 23555073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 50167288 - 50167021
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| || || | | ||| |||||||||||||    
T  50167288 aagctaatttcttgtaacccatttgtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagctcaagttggaccg 50167189  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||| ||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50167188 aactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgaacttttcactttgattactagattagatctaggt 50167089  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
     |||||||||||||| || ||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  50167088 gttgttattattgttgtttcttgtgtttactttgatattggttactactttcctttgctccacacatc 50167021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 28223538 - 28223223
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || ||| |||||||||||||    
T  28223538 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttgg 28223439  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||   ||||||||||||  |||||||||||||||| |||||   |||||||||||||||||| |||||    
T  28223438 accgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttttgcttgtgattttgtgtttttcactttgattactagattag 28223339  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||| | ||||||||||||| | ||||  |||||| | ||||||    
T  28223338 atctaggtgttgttattattgttgttgcttgtgttcactttgatattggttactactttcgtttgctccacacatcatagtttgtattggtctgagtttt 28223239  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  28223238 gagtccgaattcacaa 28223223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 45644467 - 45644160
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | || || | | |||||||||||||||||    
T  45644467 aagctaatttcttgcaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatatctcccccagattaggtcaagttggaccg 45644368  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  |||||||  |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |    
T  45644367 aactgggtcaacaatctttggtgtgcttgtttctcttctctctttatcttttgtttgtggttttgagcttttcactttgattgctagattagatctagat 45644268  T
Q  203 attgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
     |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  ||| |||| | |||||| ||||    
T  45644267 gttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtga-ttttgagtccg 45644169  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  45644168 aattcacaa 45644160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13138093 - 13137782
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||| |||||||| || |||| |||||||||||||||| |||||  ||||| || || | |||||||||  ||||    
T  13138093 gttgaagctaatttcttgtaacccatttgcatctctttgtaagaacacattgatagtggattgaagagagcaatctctcccctagagtaggtcatattgg 13137994  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||| ||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  13137993 accgaactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttgcttgtggttttgaggttttcactttgattactagattagatct 13137894  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||||||| |||||||||||| |||||| |||||||| ||||||||| ||||||||||||| |  |||  |||||||| |||||||| |    
T  13137893 aggtgttgttattattgttgttgcttgtgtttactttgaaattggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagt 13137794  T
Q  299 ccgaattcacaa 310  Q
    ||||||| ||||    
T  13137793 ccgaatttacaa 13137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 834280 - 833972
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||  |||| || || | |||||||||||||||||||    
T  834280 aagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagagtaggtcaagttggaccg 834181  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| | | ||||||||| |    
T  834180 aactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcccagattagatcttg 834081  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||||| ||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||    
T  834080 gtgttgttattgttgttattgcttgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcc 833982  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  833981 gaattcacaa 833972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 40122311 - 40122003
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgata--gtggattggagagataaatctttctcc-atagtaggtcaagttggac 100  Q
    ||||||||||||| ||||||||||||||| |||| || |||||| ||||||  ||||||| ||||||| ||||| || || ||| |||||||||||||||    
T  40122311 aagctaatttcttataactcatttgtatcactttgtaagaactctttgatatagtggattagagagatcaatctctcccccatattaggtcaagttggac 40122212  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||| ||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40122211 cgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactaaattagatctag 40122112  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||||||||||| |||||||||||  ||| ||||||||||| ||||||||| |||||||| |||| | ||||  |||||||| | |||||| |||    
T  40122111 gtgttgttattattgttgttgcttgtgttcacttagatattggttactactttcctttgctccacgcatcatagtttgtattggtgtga-ttttgagtcc 40122013  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  40122012 gaattcacaa 40122003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 28265671 - 28265365
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  28265671 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 28265572  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||| |||||||||    
T  28265571 accgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttggttgtggttttgagctttttactttgattactagattagatct 28265472  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    || | |||||||||||||| |||||||||||  |||||||||||| || || |||||| | ||||||||||| | ||||  |||||||| | |||||| |    
T  28265471 agatgttgttattattgttgttgcttgtgttcactttgatattggctactattttcctttactccacacatcatagtttgtattggtgtga-ttttgagt 28265373  T
Q  299 ccgaattc 306  Q
    ||||||||    
T  28265372 ccgaattc 28265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 46064969 - 46065276
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||| ||||| || || | |||||||||||||||    
T  46064969 gttgaagctaatttcttgtaactcatgtgtatctctttgtaagaactcattcatagtggattggagagatcaatctctcccccagagtaggtcaagttgg 46065068  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    | |||||||||||| || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||| || |||| || |||||||||    
T  46065069 atcgaactgggtaaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcctttcacatt-attagtagattagatct 46065167  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||||||| |||||||| ||| |||||| ||||||||  ||| || | ||||||||||||||||||||||||| ||||  ||||||| |    
T  46065168 aggtgttgttattattgttgttgcttgtatttactttga-attggttacaactatcgtttgctccacacatctttgttttcatt-gtgt-ggttttgagt 46065264  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  46065265 ccgaattcacaa 46065276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 28220343 - 28220028
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  28220343 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 28220244  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||   ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  28220243 accgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattag 28220144  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| |||||||||||||| ||| |||||||  |||| |||||||||| || ||| || || |||||||||| | ||||  |||||||| ||||||    
T  28220143 atctaggtgttgttattattgttgttgtttgtgttcactttaatattggttactaattttctttgttccacacatcatagtttgtattggtgtgagtttt 28220044  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  28220043 gagtccgaattcacaa 28220028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 50169323 - 50169039
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||||| ||||| || || | | |||||||||||||||||    
T  50169323 aagctaatttcttgtaactcatttgtatctctttgtaagtactcattgatagtggattgaagagatcaatctctcccctagattaggtcaagttggaccg 50169224  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||| | | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  50169223 aactggatcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatataggt 50169124  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
     |||||||||||||| ||| |||||||  ||||||||||||||| ||||||| | |||| |||||||| | ||||  ||||||||    
T  50169123 gttgttattattgttgttgtttgtgttcactttgatattggttactactttcatttgcttcacacatcatagtttgtattggtgt 50169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 15820358 - 15820660
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||| |||| |||||||||||| || |||| |||||||||||||||    
T  15820358 gttgaagctaatttcttgtaacacatttgtatctctttttaagaactcattgatagtgcattgaagagataaatctctcatccagagtaggtcaagttgg 15820457  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    | |||||| ||||| ||||| ||||||| |||||||||||||||||||||||  ||||||||| || ||| ||||||  ||||||| ||| |||||||||    
T  15820458 atcgaactaggtaaacatttattggtgtgtttgtttctcttctctccttatccattgcttgtgtttatgagcttttctatttgattcctatattagatct 15820557  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||      ||||| |||||||||||| |||||||||| |||| ||||||||| ||||||||||||||  ||||  |||||||  |||||||| |    
T  15820558 aggtgttg------ttgttgttgcttgtgtttactttgatattagttactactttcctttgctccacacatctaagttt--attggtg--agttttgagt 15820647  T
Q  299 ccgaattcacaat 311  Q
    |||||||||||||    
T  15820648 ccgaattcacaat 15820660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 3156916 - 3157192
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || ||| |||||||||||||    
T  3156916 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttgg 3157015  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  3157016 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattag 3157115  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  3157116 atctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatc 3157192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 270
Target Start/End: Complemental strand, 197017 - 196751
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatag--taggtcaagttggaccgaac 105  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||  |||| || ||  ||  ||||||||||||||||||||    
T  197017 taatttcttgtaactcatttgtatccctttgtaagaactcattgatagtggattggagagatttatctctccccccagattaggtcaagttggaccgaac 196918  T
Q  106 tgggtaatcatttcttggtgtatttgtt--tctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggta 203  Q
    ||| | | || |  ||||||| ||| ||  ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||     
T  196917 tggatcaacaatctttggtgtgtttttttctctcttctctctttatcttttgcttgtggttttgagcttctcactttgattactagattagatgtaggtg 196818  T
Q  204 ttgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||||||||| |||||||||||  ||||||||||||||| || |||||| |||||||||||||    
T  196817 ttgttattattgttgttgcttgtgttcactttgatattggttactattttcctttgctccacacatc 196751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 3847234 - 3846962
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    ||||||| || ||||||| |||||||||| |||| || ||||||||||||||||||||||||||||  |||| ||| ||| | |||||||||||||||||    
T  3847234 aagctaaatttttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatccatctcttccccagattaggtcaagttggaccg 3847135  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||| ||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  3847134 aacttggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactatattagatctag 3847035  T
Q  201 gtattgttat---tattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    || |||||||   ||||||| |||||||||||  ||||||||||||||| ||||||||| | |||||||||||    
T  3847034 gtgttgttattattattgttgttgcttgtgttcactttgatattggttactactttcctttactccacacatc 3846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 4552754 - 4552454
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | |||||||| |||| || ||||||||||||| |||||||||||||| ||||| || | || |||||||||||||||    
T  4552754 gttgaagctaatttcttgtaacccctttgtatccctttgtaagaactcattgataatggattggagagatcaatctctccctcagagtaggtcaagttgg 4552655  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||||||||       |||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  4552654 accgaactgggtcaacaatctttggtgtgtttgtttctctt-------tatcttttgcttgtggttttgagcttttcactttgattactagattagatct 4552562  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    | || |||||||||||||| || ||||||||| |||||| |||||||| ||||||||| | || ||| |||| | ||||  |||||||| |  ||||| |    
T  4552561 atgtgttgttattattgttgttacttgtgtttactttgaaattggttactactttcctttacttcacgcatcatagtttgtattggtgtgaaatttgagt 4552462  T
Q  299 ccgaattc 306  Q
    ||||||||    
T  4552461 ccgaattc 4552454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 315
Target Start/End: Complemental strand, 8550900 - 8550581
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||    
T  8550900 aagctaatttcttgtaactcatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggacc 8550801  T
Q  102 gaactgggtaatcatttcttggtgtatttgttt------ctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||||| | || |  ||||||| |||||||       ||||||||| ||||||| |||||||| |||||   |||||||||||||| ||| ||||||    
T  8550800 gaactgggtgaacaatctttggtgtgtttgttttctctcttcttctctctttatcttgtgcttgtgattttgtgtttttcactttgattcctagattaga 8550701  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | ||||    
T  8550700 tctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-tttt 8550602  T
Q  295 gaatccgaattcacaataaat 315  Q
    || ||||||||||||| ||||    
T  8550601 gagtccgaattcacaacaaat 8550581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 30476563 - 30476248
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatcttt-ctccatagtaggtcaagttgg 98  Q
    ||||||| |||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||| ||||| | | |||||  |||| |||||||    
T  30476563 gttgaagataatttattgtaacccatttgtatctctttgtaagaactcattgatactggattggacagatcaatctctaccccatatgaggttaagttgg 30476464  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  ||||||||||||||  ||||||| ||||||||||||| |||||||||||||||| || |||||    
T  30476463 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttacttgtggttttgagcttttcactttgattattagattag 30476364  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
     |||| || |||||||||||||| |||||||||||| |||||| |||||||| ||||||||| | ||||||||||  | ||||  |||||||| ||||||    
T  30476363 gtctaagtgttgttattattgttgttgcttgtgtttactttgaaattggttactactttcctttactccacacattatagtttgtattggtgtgagtttt 30476264  T
Q  295 gaatccgaattcacaa 310  Q
    || | |||||||||||    
T  30476263 gagttcgaattcacaa 30476248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 41360965 - 41361276
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||| |||||||||||||  |||||| ||| | || || |||||||||||  ||||    
T  41360965 gttgaaactaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcatattgg 41361064  T
Q  99 accgaactgggtaatcatt-tcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||| ||| | || | ||||||||| ||||||||| ||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| |||||||     
T  41361065 accgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgtggttttgagctttttactttgattcctagattagata 41361164  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    ||||| |||||||| ||||| || ||||||||| ||||||||||| ||| ||||||||| ||||||||||||| | ||||| ||||||   ||||||||     
T  41361165 taggtgttgttattgttgttgttacttgtgtttactttgatattgattaatactttcctttgctccacacatcatagtttt-attggttagagttttgag 41361263  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  41361264 tccgaattcacaa 41361276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13659453 - 13659153
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||| || ||||| ||||||||| || |||||||||||||||||||||||||||| ||||| || || | ||||||| |||||||    
T  13659453 gttgaagctaatttcttgttacccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaagttgg 13659354  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| |    
T  13659353 accgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagattt 13659255  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||         |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||  | ||||  |||| ||| | |||||| |    
T  13659254 aggtgttgtta---------ttgcttgtgtttactttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagt 13659165  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  13659164 ccgaattcacaa 13659153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 37559981 - 37559666
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatag--taggtcaagttggacc 101  Q
    |||||||||||||||||| ||||||||||||||| || |||||| ||||||||| ||||||||||| ||||| || || |||  ||||||||||||||||    
T  37559981 aagctaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtgaattggagagatcaatctctccccctagattaggtcaagttggacc 37559882  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaatt-aga 195  Q
    ||||| ||| | || |  ||||||| ||||||  ||||||||||||   ||||||||||||||||||||||  ||||||||||||||| ||| ||| |||    
T  37559881 gaacttggtcaacaatctttggtgtgtttgttcctctcttctctcccctttatcttttgcttgtggttttgtgcttttcactttgattcctagatttaga 37559782  T
Q  196 tctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||| ||||| | ||||  |||||||| ||||||    
T  37559781 tctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccagacatcatagtttatattggtgtgagtttt 37559682  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  37559681 gagtccgaattcacaa 37559666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 49918401 - 49918694
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  49918401 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttgg 49918500  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||| ||| | || |  ||||||| ||||||  ||||||||||||||  ||||||||||||||| ||||  ||||||| ||||||| ||| |||||    
T  49918501 accgaactaggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggatttgtgcttttcattttgattcctagattag 49918600  T
Q  195 atctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    || |||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  49918601 atataggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 49918694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 10925274 - 10925588
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt----aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagt 95  Q
    ||||||||||||||||||||||||||||||||||||||     | ||| ||||||||||||||||||||| || ||||| || || | | ||||| ||||    
T  10925274 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctcccctagattaggtaaagt 10925373  T
Q  96 tggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||| |||||||||| | || |  ||| ||| ||||||| ||||||||| |||||||||||||||||||||||  ||||| |||||||||||| ||||||    
T  10925374 tggatcgaactgggtcaacaatctttgatgtgtttgtttatcttctctctttatcttttgcttgtggttttgagtttttccctttgattactagattaga 10925473  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||| |||||||| ||| || |||||||||||  ||||||||||| ||| ||||||||| ||||||||||| | | ||||  |||| ||| | ||||    
T  10925474 tctaggtgttgttattgttgattattgcttgtgttcactttgatattgattactactttcctttgctccacacaacatagtttgtattgttgtga-tttt 10925572  T
Q  295 gaatccgaattcacaa 310  Q
    || |||||||||||||    
T  10925573 gagtccgaattcacaa 10925588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 2 - 310
Target Start/End: Original strand, 1833574 - 1833874
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttgga 99  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||  ||| | |||||||| |||||    
T  1833574 ttgaagctaaattcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccaccagattaggtcaaattgga 1833673  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    || |||     |||| ||    ||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||    
T  1833674 ccaaac-----aatcttt----ggtgtgtttgtttattttctctctttatcttttgcttgtagttttgtgcttttcactttgattactagattagatcta 1833764  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| |||||||||||||| |||||||||||| |||||| ||||||||  |||||||| | ||||||| ||| | ||||  |||||||| | | |||| ||    
T  1833765 ggtgttgttattattgttgttgcttgtgtttactttgaaattggttacgactttcctttactccacagatcatagtttgtattggtgtga-tattgagtc 1833863  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  1833864 cgaattcacaa 1833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 928093 - 927787
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | |||| |||||||| ||  |||||||| |||||||||| ||||||  || || ||| |||  |||||||||||| |    
T  928093 gttgaagctaatttcttgtaacccttttggatctctttgtaaaaactcattaatagtggattagagagaccaacctcttccccaaggtaggtcaagttag 927994  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgatta-ctaaattagatc 197  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  927993 accgaactgggtaaacatttctttgtgtgtttgtttctcttctctctttatcttttgtttgtggttttgaacttttcactttgattatctatattagatc 927894  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    || || |||   || ||||| ||| ||||| || |||||||||||||||  |||| ||| | ||||||||||| | ||||  |||| ||| | ||||||     
T  927893 taagttttg---ttgttgttgttgtttgtgattactttgatattggttaccacttccctttactccacacatcatagttt--attgatgtga-ttttgag 927800  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  927799 tccgaattcacaa 927787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3189381 - 3189604
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    ||||||||||||||| |||||||| ||||||||| ||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  3189381 gttgaagctaatttcctgtaactcttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttg 3189480  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||    
T  3189481 gaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagatta 3189580  T
Q  194 gatctaggtattgttattattgtt 217  Q
    ||||||||| || |||||||||||    
T  3189581 gatctaggtgttattattattgtt 3189604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3198198 - 3198421
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    ||||||||||||||| |||||||| ||||||||| ||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  3198198 gttgaagctaatttcctgtaactcttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttg 3198297  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||    
T  3198298 gaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagatta 3198397  T
Q  194 gatctaggtattgttattattgtt 217  Q
    ||||||||| || |||||||||||    
T  3198398 gatctaggtgttattattattgtt 3198421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3207037 - 3207260
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    ||||||||||||||| |||||||| ||||||||| ||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  3207037 gttgaagctaatttcctgtaactcttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtaggtcaagtttg 3207136  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||    
T  3207137 gaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattactagatta 3207236  T
Q  194 gatctaggtattgttattattgtt 217  Q
    ||||||||| || |||||||||||    
T  3207237 gatctaggtgttattattattgtt 3207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 31659289 - 31659604
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||||| ||||| || | || | |||||||||||||    
T  31659289 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctccctcagattaggtcaagttgg 31659388  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||| ||  ||| ||||||||  ||||||||||||| ||||||||  ||||| ||||||||| ||| |||||    
T  31659389 accgaactgggtcaacaatctttggtgtgtttattcctcttttctctccttttatcttttgcttatggttttgtgctttttactttgattcctagattag 31659488  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||| |||| |||||||| ||| || |||||||||||   |||||||||||||| |||||| || | ||||||||||| |  |||  |||||||| | |||    
T  31659489 atcaaggtgttgttattgttgattattgcttgtgttcattttgatattggttactacttttcttttctccacacatcatattttatattggtgtga-ttt 31659587  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  31659588 tgagtccgaattcacaa 31659604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 44455211 - 44455526
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||| || || | | ||||||||||| |    
T  44455211 gttgaaactaatttcttgtaactcatttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagtttg 44455310  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | |  |  ||||||| ||||||  |||||||||| |  ||||||||||||| ||||||||   |||||||||||||| ||| |||||    
T  44455311 accgaactgggtcaacgatctttggtgtgtttgttcctctcttctcttcctttatcttttgcttttggttttgtgtttttcactttgattcctagattag 44455410  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||| |||||||  |||||||||||||||  ||||| || | ||||||| ||| | ||||  |||||||| | |||    
T  44455411 atctaggtgctgttattgttgattattgtttgtgttcactttgatattggttaccacttttcttttctccacatatcatagtttgtattggtgtga-ttt 44455509  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| | |||||||||||    
T  44455510 tgagtacgaattcacaa 44455526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 20762727 - 20763012
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||  || |||||||||||||||||||||||||||| ||||| | || || ||||||||||| |||||||    
T  20762727 aagctaatttcttgtaacccttttgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggacc 20762826  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||| ||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||     || ||| ||||||||    
T  20762827 gaactaggtgaccaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcac-----ttcctagattagatc 20762921  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||  ||||||| ||| || |||||||  ||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  20762922 taggtgctgttattgttgattattgcttgaattcactttgatattggttaatactttcctttgctccacacatcatagtttgtattggtgt 20763012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 193662 - 193789
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  193662 gttgaagctaatttcttgtaactcatttgtatctctttgtaataactcattgatagtggattggagagatcaatctcttctccagagtatgtcaagttgg 193761  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  193762 accgaactgggtgaacatttcttggtgt 193789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 37503671 - 37503364
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||    |||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | || ||||||||||    
T  37503671 gttgaagctaatttcttgtaacc---ttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattatgtcaagttgg 37503575  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    | |||||| ||| | || |  ||||||| ||||||  ||||||||||||  |||||||||||||| |||||||  ||||||||||| ||| ||| |||||    
T  37503574 atcgaactaggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgcggttttgtgcttttcactttaattcctagattag 37503475  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| ||| |||| ||| || |||||||||||  ||||||||||      ||||||||| | ||||||||||| | ||||  |||||||| | |||    
T  37503474 atctaggtgttgatattgttgattattgcttgtgttcactttgatatt-----ctactttcctttactccacacatcatagtttgtattggtgtga-ttt 37503381  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  37503380 tgagtccgaattcacaa 37503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13547206 - 13547079
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  13547206 gttgaagctattttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 13547107  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  13547106 accgaactgggtgaacatttcttggtgt 13547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 11348749 - 11348872
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  11348749 gttgaagctaatttcttgtaacccatttgtatctctttctaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 11348848  T
Q  99 accgaactgggtaatcatttcttg 122  Q
    ||||||||| || | |||||||||    
T  11348849 accgaactgagtgaacatttcttg 11348872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31925824 - 31925697
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||| | |||||||||||||||    
T  31925824 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagttgg 31925725  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||| ||| | |||||||||||||    
T  31925724 accgaactaggtgaacatttcttggtgt 31925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 269
Target Start/End: Complemental strand, 13316465 - 13316194
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  13316465 aagctaatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 13316366  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  || |||  ||||||  ||||||||||||  |||| |||||||||||| ||||   |||||||||||||| ||| ||||||||    
T  13316365 gaactgggtgaacaatctttagtgagtttgtttctctcttctctccttttatattttgcttgtgg-tttgtgtttttcactttgattcctagattagatc 13316267  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    |||||  ||||||| ||| || |||||||  ||  ||||| ||||| ||| ||||||||| ||||||||||||    
T  13316266 taggtgctgttattgttgattattgcttgcattcactttgttattgattactactttcctttgctccacacat 13316194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 13549110 - 13548990
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaac 105  Q
    |||||||| |||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||    
T  13549110 ctaatttcatgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggaccgaac 13549011  T
Q  106 tgggtaatcatttcttggtgt 126  Q
    ||||| | |||||||||||||    
T  13549010 tgggtgaacatttcttggtgt 13548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 37168352 - 37168476
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggacc 101  Q
    |||||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||    
T  37168352 aagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttggacc 37168451  T
Q  102 gaactgggtaatcatttcttggtgt 126  Q
    ||||||||| | |||||||||||||    
T  37168452 gaactgggtgaacatttcttggtgt 37168476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 47255457 - 47255329
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||  ||||    
T  47255457 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttg 47255358  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||||||| | |||||||||||||    
T  47255357 gaccgaactgggtgaacatttcttggtgt 47255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 8870698 - 8870551
Alignment:
Q  141 tctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatat 240  Q
    |||| |||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||| || || |||||||||||||||||| || ||||||||     
T  8870698 tctctttatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattgtttttgcttgtgattactttgatac 8870599  T
Q  241 tggttattactttcctctgctccacacatctttg-ttttcattggtgt 287  Q
    | |||| ||||||||| || ||||||||| |||| |||||||||||||    
T  8870598 tagttactactttcctttgttccacacatatttgtttttcattggtgt 8870551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 36683741 - 36683892
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgga 99  Q
    |||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||| || ||||| || || | ||||||||||||| ||    
T  36683741 gttgaagctaatttcttgtaactcatttgtaa---------gaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtcaagttaga 36683831  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgt 160  Q
    |||||||| |||| ||| ||||||||| ||||||| ||||||||| |||||||||||||||    
T  36683832 ccgaactgagtaaacatctcttggtgtgtttgtttgtcttctctctttatcttttgcttgt 36683892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42298092 - 42297980
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||| ||||| | ||||| |||||||||  ||||    
T  42298092 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcatggttg 42297993  T
Q  98 gaccgaactgggt 110  Q
    |||||||||||||    
T  42297992 gaccgaactgggt 42297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 19752737 - 19752844
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||| ||||| |||||||||||||    
T  19752737 gttgaagctaatttcttgtaaccgatttgtatctctttgtaagaactcattgatagaggattggagagatcaatctctctcccatattaggtcaagttgg 19752836  T
Q  99 accgaact 106  Q
    ||||||||    
T  19752837 accgaact 19752844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 271
Target Start/End: Complemental strand, 44646875 - 44646654
Alignment:
Q  46 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 144  Q
    ||||| ||||||||||| |||||| ||||| ||| | | |||||||||| |||||||||||| |||||  |||| ||||||  ||||||||||||   ||    
T  44646875 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaatttggaccgaactaggtaaatattttttggtgcgtttgtttctctt---tc 44646779  T
Q  145 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 244  Q
     |||||||||||||||| |||||  ||||||||||| ||| |||  |||||| ||||| |||||||| ||| | ||||||| | || | || ||||||||    
T  44646778 tttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgttatttttggtgttgcttgaggtttcattaatattggt 44646681  T
Q  245 tattactttcctctgctccacacatct 271  Q
    || ||||||||| |||| |||||||||    
T  44646680 tactactttcctttgctacacacatct 44646654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19754546 - 19754657
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| || | || | |||||||||||||    
T  19754546 gttgaagctaatttcttgtaaccgatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccctcagattaggtcaagttgg 19754645  T
Q  99 accgaactgggt 110  Q
    |||||| |||||    
T  19754646 accgaagtgggt 19754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 29136298 - 29136425
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||| ||| ||||||||| ||||| || |||||||||||| ||||||||||||||| ||||| | ||||| ||||||||||| |||    
T  29136298 gttgaagctaatttcttggaacccatttgtatttctttgtaagaactcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagtttg 29136397  T
Q  98 gaccgaactgggtaatcatttcttggtg 125  Q
    ||||||||| ||| | ||||||||||||    
T  29136398 gaccgaactaggtgaacatttcttggtg 29136425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37033190 - 37033077
Alignment:
Q  1 gttgaagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||  ||||| | |||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||    
T  37033190 gttgaagctaatttcttgtaatccattttgcatctctttgtaagaactcattgatagtggattggagagattaatctcttctccatagtaggtcatggtt 37033091  T
Q  97 ggaccgaactgggt 110  Q
    ||||||||||||||    
T  37033090 ggaccgaactgggt 37033077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 51765450 - 51765666
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgga 99  Q
    |||||||||||||||||| | ||| |||||||||||  | |||||||||||||||||||||||||| | ||||| | ||||| |||||| |||| |||||    
T  51765450 aagctaatttcttgtaaccccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttgga 51765549  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||| | || |  ||||||| |||||||  |||||  ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| ||||    
T  51765550 ccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagatta 51765648  T
Q  194 gatctaggtattgttatt 211  Q
    ||||||||| ||||||||    
T  51765649 gatctaggtgttgttatt 51765666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 46 - 271
Target Start/End: Complemental strand, 44650233 - 44650012
Alignment:
Q  46 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 144  Q
    ||||| ||||||||||| |||||| ||||| ||| | | |||||||||| |||||||||||| |||||  |||| ||||||  ||||||||||||   ||    
T  44650233 tcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaatttggaccgaactaggtaaatattttttggtgcgtttgtttctctt---tc 44650137  T
Q  145 cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggt 244  Q
     |||||||||||||||| |||||  ||||||||||| ||| |||  |||||| ||||| |||||||| ||| | ||||||| | || | || ||||||||    
T  44650136 tttatcttttgcttgtgattttgtgcttttcacttt-atttctatgttagatttaggt-ttgttatttttggtgttgcttgaggtttcattaatattggt 44650039  T
Q  245 tattactttcctctgctccacacatct 271  Q
    || |||||| || |||| |||||||||    
T  44650038 tactacttttctttgctacacacatct 44650012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 5459999 - 5460203
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctctt 139  Q
    ||||||||||||||| |||||||||||| ||||| || || | ||||| |||  ||||| | ||||| ||||| ||||||||| ||| ||||||||| ||    
T  5459999 gaactcattgatagtagattggagagatcaatctctcatctagagtagatcattgttgggctgaactaggtaaacatttcttgttgtgtttgtttctatt 5460098  T
Q  140 ctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgata 239  Q
    ||||| ||||||||||||||||||||||  |||| || |||| || ||| ||| ||||||||| ||||| || ||||| ||| ||| | ||  |||||||    
T  5460099 ctctctttatcttttgcttgtggttttgtgctttacattttg-ttcctagattcgatctaggt-ttgttcttgttgttgttgtttgagattattttgata 5460196  T
Q  240 ttggtta 246  Q
    |||||||    
T  5460197 ttggtta 5460203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 7482344 - 7482222
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggacc 101  Q
    |||||||||||||||||| ||||| |||||||||| || |||||||||||||||| ||||||||||| ||||| | || || ||||||||||||||||||    
T  7482344 aagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtgaattggagagatcaatctctccttcagagtaggtcaagttggacc 7482245  T
Q  102 gaactgggtaatcatttcttggt 124  Q
    ||||| ||| | |||||| ||||    
T  7482244 gaactaggtgaacatttcatggt 7482222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 37282809 - 37282500
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccat---agtaggtcaagt 95  Q
    |||||||||||||| | ||||| | |||| ||||||||   | |||||||||  |||||||||||||||||||||||  |||| |   |||||||||| |    
T  37282809 gttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatct--ctcctttggagtaggtcaatt 37282712  T
Q  96 tggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatc-ttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    ||||| ||||| | ||| ||||| ||||||  ||||||||||||||||  || || |||| ||||||||||||   |||||||  ||||| ||| |||||    
T  37282711 tggactgaactagataaacattttttggtgcgtttgtttctcttctctatttctcttttttcttgtggttttgcgtttttcac-ctgatttctagattag 37282613  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattac-tttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| |||||||| |||||  | |||||| || |||| |||||  ||||||| |||| | |||||||||||| |  ||||  |||||||| | |||    
T  37282612 atctaggt-ttgttattgttgttggtacttgtggttactttcatattaattattacttttcttttgctccacacatttaagttt--attggtgtga-ttt 37282517  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  37282516 tgagtccgaattcacaa 37282500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 3460747 - 3460915
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||| | ||||||| |||||   | ||||  ||||||||| |||||||||||| ||| | |  | | |||||||||| || |    
T  3460747 gttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaatatcttcctagagtaggtcaatttag 3460846  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    ||| || | ||||| ||||||||  ||| ||||||||||||||||| |||||||||| |||||||||||    
T  3460847 accaaattaggtaaacatttcttaatgtgtttgtttctcttctctctttatcttttgtttgtggttttg 3460915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 47115226 - 47115347
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggac 100  Q
    |||||||||||||||||| ||||| |||||||||| ||  ||| ||||||||||||||||||||||| ||||| | ||||| |||||||||  |||||||    
T  47115226 aagctaatttcttgtaacccattttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctgctccagagtaggtcattgttggac 47115325  T
Q  101 cgaactgggtaatcatttcttg 122  Q
    |||||||||| | |||||||||    
T  47115326 cgaactgggtgaacatttcttg 47115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 2263092 - 2262850
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccatag--taggtcaa-gt 95  Q
    ||||||| |||||||||||||| | ||| ||||| |||   | ||||| ||||||||||||||| |||||| |||||||| || |||  |||||||  ||    
T  2263092 gttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttc-ccttagggtaggtcattgt 2262994  T
Q  96 tggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||| |||||||| |||| ||||||||||| | ||||||| ||||||||| ||| |||||| |||||| ||||   ||||||| |||||| ||||||||||    
T  2262993 tggtccgaactgagtaaacatttcttggtatgtttgtttttcttctctcttta-cttttgtttgtggatttgggtttttcac-ttgattcctaaattaga 2262896  T
Q  196 tctaggtattgttattattgtttttgcttgtgtttgctttgatattg 242  Q
    | | |||| ||||||| |||||  ||||| |  || |||||||||||    
T  2262895 tttgggta-tgttattgttgttgctgcttattgttactttgatattg 2262850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 34603631 - 34603735
Alignment:
Q  5 aagctaatttcttgtaactcatttgt-atctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggacc 101  Q
    |||||||||||||||||| ||||| | |||||||| || |||||||||||| |||||||| |||||| ||||| || |||| ||||||||||||||||||    
T  34603631 aagctaatttcttgtaacccattttttatctctttgtaagaactcattgatggtggattgaagagatcaatctctcctccagagtaggtcaagttggacc 34603730  T
Q  102 gaact 106  Q
    |||||    
T  34603731 gaact 34603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 37876865 - 37876756
Alignment:
Q  19 taactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcat 116  Q
    |||| ||||||||||||||| ||  |||||||||||||||||||| |||||| ||||| || |||| ||||  |||||||| |||||||||||| | |||    
T  37876865 taacccatttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctccagagtacatcaagttgaaccgaactgggtgaacat 37876766  T
Q  117 ttcttggtgt 126  Q
    ||||||||||    
T  37876765 ttcttggtgt 37876756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 8871130 - 8871034
Alignment:
Q  49 ttgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctc 144  Q
    ||||||||||||||||||||| ||||| || || |||||||| |||||||||||||| || |||| ||||| ||||| | ||||||||| |||||||    
T  8871130 ttgatagtggattggagagatcaatctctcccccatagtaggccaagttggaccgaattgagtaaacatttattggtatgtttgtttcttttctctc 8871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 28242382 - 28242483
Alignment:
Q  27 ttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttgg 123  Q
    |||||||||||| || ||||||||| |||||||||||||||||| ||||| || |||| |||||||||  ||||||||||||||||| | ||||||||||    
T  28242382 ttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttgg 28242480  T
Q  124 tgt 126  Q
    |||    
T  28242481 tgt 28242483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6808503 - 6808579
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatct 75  Q
    ||||||||||| |||||||||||| ||||||||||||  | | ||||||||| |||||||||||||||||| |||||    
T  6808503 gttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatct 6808579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 36683883 - 36683951
Alignment:
Q  217 ttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggt 285  Q
    |||||||||| ||| |||||||||||||||  |||||||| |||||||||||| |||||||| ||||||    
T  36683883 ttttgcttgtttttactttgatattggttaccactttcctttgctccacacatgtttgtttttattggt 36683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 16914193 - 16914124
Alignment:
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    ||||||||||||||| || ||||  |||| ||||| ||||||||||| |||||||||||||| |||||||    
T  16914193 gaccgaactgggtaaacaattctatgtgtgtttgtgtctcttctctctttatcttttgcttgcggttttg 16914124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 40282435 - 40282565
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||    
T  40282435 ctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccga 40282533  T
Q  104 actgggt-aatcatttcttggtgtatttgttt 134  Q
    ||||||| ||  || ||||||||| |||||||    
T  40282534 actgggtgaacaatctcttggtgtctttgttt 40282565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 9036471 - 9036604
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| ||||  || |||||| |||||||||||||| ||||   ||||| | ||| | ||||||||||| ||||||    
T  9036471 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtttggac 9036569  T
Q  101 cgaactgggt-aatcatttcttggtgtatttgttt 134  Q
    |||||||||| ||  || |||||||||||||||||    
T  9036570 cgaactgggtgaacaatctcttggtgtatttgttt 9036604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 9987259 - 9987364
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||| ||| | |||||||| |||||  | ||||||||||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||    
T  9987259 ctaatttcttgcaac-cttttgtatcccttttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccga 9987357  T
Q  104 actgggt 110  Q
    |||||||    
T  9987358 actgggt 9987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 22079371 - 22079491
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggac 100  Q
    ||||||||||||||||||   |||||||||||||   | ||||||||||||| |||||||||||||| ||| | | ||||| |||||||||  | |||||    
T  22079371 aagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtaggtcattgctggac 22079470  T
Q  101 cgaactgggtaatcatttctt 121  Q
    | |||| ||||| ||||||||    
T  22079471 caaacttggtaaacatttctt 22079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 20622349 - 20622217
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt----aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    ||||||||||||||| | |||||||| |||||    | |||||| |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||    
T  20622349 ctaatttcttgtaac-cttttgtatcccttttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggacc 20622251  T
Q  102 gaactgggt-aatcatttcttggtgtatttgttt 134  Q
    ||||||||| ||  || ||||||||| |||||||    
T  20622250 gaactgggtgaacaatctcttggtgtctttgttt 20622217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 24203002 - 24203038
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  24203002 tgctccacacatctttgttttcattggtgtgagtttt 24203038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 32889320 - 32889274
Alignment:
Q  239 attggttattactttcctctgctccacacatctttgttttcattggt 285  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||||    
T  32889320 attgattatcactttcttttgctccacacatctttgttttcattggt 32889274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 3189620 - 3189708
Alignment:
Q  219 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 308  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3189620 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 3198437 - 3198525
Alignment:
Q  219 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 308  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3198437 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 3207276 - 3207364
Alignment:
Q  219 ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcac 308  Q
    |||||||||||  |||||| |||||||| ||||||||| ||||||| ||||| | ||||  |||||||| | |||||  |||||||||||    
T  3207276 ttgcttgtgttcactttgaaattggttactactttcctttgctccagacatcatagtttatattggtgtga-ttttgtgtccgaattcac 3207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9109537 - 9109461
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatct 75  Q
    ||||||| |||||||||||||| | ||||||||||||  | | |||| | ||||||||| ||||||||||| |||||    
T  9109537 gttgaagttaatttcttgtaacccttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatct 9109461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 22819535 - 22819502
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt 38  Q
    ||||||||||||||||||||||||||||| ||||    
T  22819535 aagctaatttcttgtaactcatttgtatcacttt 22819502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25652137 - 25652174
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  25652137 gttgaagctaatttcttgtaactctcttgtatctcttt 25652174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32471511 - 32471579
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagag 67  Q
    ||||||| |||||| ||| ||||| ||||||||||||  | || ||||||||||||||||||| |||||    
T  32471511 gttgaagttaatttattgcaactcttttgtatctctttgtaagaaactcattgatagtggattcgagag 32471579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 43342367 - 43342270
Alignment:
Q  58 gattggagagataaatctttctccatagtaggtcaag-ttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatctttt 154  Q
    |||||||||||| |||||||||| | ||||| |||   |||| | |||||||||||  |||| ||| |||||| ||||||||| |||| |||||||||    
T  43342367 gattggagagatcaatctttctcaagagtagatcactattgggctgaactgggtaaatattttttgatgtattggtttctcttatctctttatctttt 43342270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 13938195 - 13938258
Alignment:
Q  9 taatttcttgtaac-tcatttgtatctctttt--aggaactcattgatagtggattggagagat 69  Q
    |||||||||||||| |  |||||||||||||   || |||||||||||||||||||||||||||    
T  13938195 taatttcttgtaaccttttttgtatctctttgtaagaaactcattgatagtggattggagagat 13938258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 19359080 - 19359116
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19359080 tgctccacacatctttgtttacattggtgtgagtttt 19359116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 19361670 - 19361706
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19361670 tgctccacacatctttgtttacattggtgtgagtttt 19361706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 19380310 - 19380346
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  19380310 tgctccacacatctttgtttacattggtgtgagtttt 19380346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 29651679 - 29651622
Alignment:
Q  252 ttcctctgctccacacatctttgtt-ttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||  |||||||||||||    
T  29651679 ttcctttgctccacacatctttgttattcattggtgtgatttttg--tccgaattcacaa 29651622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 315
Target Start/End: Complemental strand, 29196499 - 29196186
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  29196499 aagctaatttcttggaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccg 29196400  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  29196399 aactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattaccagattagatctaggt 29196300  T
Q  203 attgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
     |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| || ||||| ||||    
T  29196299 gttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccg 29196200  T
Q  302 aattcacaataaat 315  Q
    ||||||||| ||||    
T  29196199 aattcacaacaaat 29196186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 32891155 - 32891456
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| || ||   ||||||||| |||||    
T  32891155 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcgttgatagtggattggagagataaatctctcccccggagtaggtcatgttgg 32891254  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||    
T  32891255 accgaactggataatcatttcttggtgtgtttgtttctcttctctccttatcttttgcttgtggttttgagtttttcactttgattcctatattagatct 32891354  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||         | ||||| |||||||||||| |||| |||||||||| ||||||||| ||||||||||||| | | |||||||||||| |||||||| |    
T  32891355 agg---------tgttgttgttgcttgtgtttactttaatattggttactactttcctttgctccacacatcatag-tttcattggtgtgagttttgagt 32891444  T
Q  299 ccgaattcacaa 310  Q
    ||||| ||||||    
T  32891445 ccgaagtcacaa 32891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 44700595 - 44700289
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||||||| ||||| || ||| | ||||||||||||||    
T  44700595 gttgaagctaatttcttgtaacctatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctccccacattaggtcaagttgga 44700496  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    ||||||| ||| | || |  || |||| ||||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||| ||||||||||    
T  44700495 ccgaactaggtcaacaatctttcgtgtgtttgtttctcttctctctttatcctttgcttgtggttttgagtttttcactttgattactagattagatcta 44700396  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| |||||||||||||| |||||||||||| ||||||||||||||| |||||| || |||||||  |||| | ||||  |||||||| | |||||| ||    
T  44700395 ggtgttgttattattgttgttgcttgtgtttactttgatattggttactacttttctttgctccatgcatcatagtttgtattggtgtga-ttttgagtc 44700297  T
Q  300 cgaattca 307  Q
    ||||||||    
T  44700296 cgaattca 44700289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 31314496 - 31314784
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||| ||||||||||||||||||||| ||| | || || ||| |||||||||||||    
T  31314496 gttgaagctaatttcttgtaacccatttgtatctttttgtaagaactctttgatagtggattggagagatcaatatctcccccatattaggtcaagttgg 31314595  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||||||||| || | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| || |    
T  31314596 accgaactgagtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattatattt 31314695  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||| |||||||||||||| |||||||||||| |||| ||||| |||||||||||||| ||||||| ||||| | ||||  ||||||||    
T  31314696 aggtgttgttattattgttgttgcttgtgtttactttaatattagttattactttcctttgctccatacatcatagtttgtattggtgt 31314784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 9666583 - 9666272
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||| || |||||| || ||| || |||||||||||||||||||||  |||| || || | | ||||| |||||||    
T  9666583 gttgaagctaatttcttgtaactcatttatacctctttgtaagaattctttgatagtggattggagagattgatctctcccccagattaggtaaagttgg 9666484  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  9666483 accgaactgggtcaacaatctttggtgtgtttgtttctcttatctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 9666384  T
Q  199 aggtattgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    |||| |||||||||||||  ||||||| | ||||||||||||||||||| ||||||||| ||||||||| ||| | ||||  |||||||| | ||||||     
T  9666383 aggtgttgttattattgtagttgcttgttatttgctttgatattggttactactttcctttgctccacagatcatagtttgtattggtgtga-ttttgag 9666285  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  9666284 tccgaattcacaa 9666272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 310
Target Start/End: Complemental strand, 23392018 - 23391714
Alignment:
Q  9 taatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaact 106  Q
    |||||||||||||| |||||||||| ||||  | |||||| |||||||||||||| |||||||||||| || || | | |||||||||||||||||||||    
T  23392018 taatttcttgtaacccatttgtatcactttgcaagaactctttgatagtggattgtagagataaatctctcccccaaattaggtcaagttggaccgaact 23391919  T
Q  107 gggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg-aacttttcactttgattactaaattagatctaggtatt 205  Q
    |||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||| ||||||||||||| ||    
T  23391918 gggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgtgttttttcactttgattactagattagatctaggtgtt 23391819  T
Q  206 gttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaatt 305  Q
    |||||||||||| || ||||||||  ||||||||||||||||||||||||| | ||||||||||| | ||||  |||||||| |||||||  | ||||||    
T  23391818 gttattattgttgtttcttgtgttcactttgatattggttattactttccttttctccacacatcatagtttgtattggtgtgagttttgtgttcgaatt 23391719  T
Q  306 cacaa 310  Q
    |||||    
T  23391718 cacaa 23391714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 5 - 306
Target Start/End: Complemental strand, 39153474 - 39153170
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||  ||||| | | ||| | ||||||||||||||| |    
T  39153474 aagctaatttcttgtaactcatttgtatccctttataagaactcattgatagtggattggagagaacaatctctcccccagattaggtcaagttggactg 39153375  T
Q  103 aactgggtaatcatttcttggtgt-atttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    |||||||| | || |  ||| |||  ||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39153374 aactgggtcaacaatctttgttgtgttttgtttctcttctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatctagg 39153275  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | |||||||||||| |   |||||||||| |||||| |||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||||  |||    
T  39153274 tgttgttattattgctgccgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagcccg 39153175  T
Q  302 aattc 306  Q
    |||||    
T  39153174 aattc 39153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 7762316 - 7762611
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||    
T  7762316 gttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 7762415  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |   || ||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  7762416 gaccgaactgggtgaacaatctatgatgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgcttttcactttgattcctaaatta 7762515  T
Q  194 gatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgta 288  Q
    ||||||||| |||||||| ||| || || ||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||||    
T  7762516 gatctaggtgttgttattgttgattattacttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgta 7762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 22835115 - 22834809
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttct-ccatagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||||||    
T  22835115 aagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctccgccatattaggtcaagttggaccg 22835016  T
Q  103 aactgggtaatcatttcttggtgtatttg-tttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||||  ||  || | ||||||| |||  ||||||||||  | ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||    
T  22835015 aactggtcaacaatat-ttggtgtgttttctttctcttcttcctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctagg 22834917  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | |||||||| ||||| || | ||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||    
T  22834916 tgttgttattgttgttattacctgtgtttactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccg 22834818  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  22834817 aattcacaa 22834809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 760902 - 761209
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | ||||||||||||||| |    
T  760902 aagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggactg 761001  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctc--ttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    || ||||| | || |  ||||||| ||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  761002 aaatgggttaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctag 761101  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    ||  || |||| ||||| ||||||| |||  ||||||| ||||||| ||||||||| ||||||||||||| | ||||  ||||||||  | ||||| |||    
T  761102 gtgctgctattgttgttattgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgt--gatttgagtcc 761199  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  761200 gaattcacaa 761209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 29810919 - 29811235
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||      
T  29810919 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttaa 29811018  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||| ||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  29811019 accgaattgggtcaacaatctttggtgtgtttgttcatctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcctagattag 29811118  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || |||||||||||  |||||| |||||||| ||||||||| ||||||||| ||| |  |||  |||||||| |||||    
T  29811119 atctaggtgctgttattgttgattattgcttgtgttctctttgaaattggttactactttcctttgctccacaaatcatattttgtattggtgtgagttt 29811218  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| | |||||||||||    
T  29811219 tgagttcgaattcacaa 29811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 16499080 - 16499340
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||| || ||||| ||||||||| || |||||||||||||||||||||||||||| ||||| || || | ||||||| |||||||    
T  16499080 gttgaagctaatttcttgttacccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaagttgg 16499179  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| |    
T  16499180 accgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagattt 16499278  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    |||| ||||||         |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  16499279 aggtgttgtta---------ttgcttgtgtttactttgatgttggttactactttcctttgctccacacat 16499340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 19684002 - 19683706
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||||||||||||||||| |||||    
T  19684002 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggacc 19683903  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||||||||   |||||||||| ||| ||| ||||||||    
T  19683902 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttttgtgtttttcacttttattcctagattagatc 19683803  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||| ||||| | ||||  |||||||| |||||    
T  19683802 taggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtgagttt 19683706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 51398865 - 51399180
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| || || | | |||||||||||||    
T  51398865 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatttatctctcccccagattaggtcaagttgg 51398964  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||| ||| | || |  ||||||| ||||||  ||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  51398965 accgaacttggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtacttttcactttgattcctagattag 51399064  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||||| ||| |  ||||||||||| ||  ||||||||| ||||||| ||||| | ||||  |||||| | | |||    
T  51399065 atctaggtgctgttattgttgattattgctagtgctcactttgatattgttttctactttcctttgctccatacatcatagtttgtattggtatga-ttt 51399163  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  51399164 tgagtccgaattcacaa 51399180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 40735434 - 40735709
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| |||||||   ||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  40735434 gttgaagctaatttattgtaaccagtttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 40735533  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||||||| | || |  ||||||||||||||  |||||||||||||| ||||||||||||||| ||||  |||||||||||| || ||| ||||||    
T  40735534 accgaactgggtcagcaatctttggtgtatttgttcctctcttctctcctttatcttttgcttgtggatttgtgcttttcactttggttcctatattaga 40735633  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||  ||||||| ||| || ||| |||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  40735634 tctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatc 40735709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 29813114 - 29813428
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||| |||||||| || ||||||||| |||||||||||||||||| ||||| || || | | | ||||| |||||    
T  29813114 gttgaagctaatttcttgtaacccatttgcatctctttgtaagaactcatttatagtggattggagagatcaatctctcccccagatttggtcatgttgg 29813213  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||||||| | || |  ||| ||| ||||||  ||||||||| | |||||||||| |||||||||||| |||||||||||||||  || |||||||    
T  29813214 accgaactgggtcaacaatctttgatgtgtttgttcctctcttctccctttatcttttggttgtggttttgagcttttcactttgattcttagattagat 29813313  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    ||||||  ||||||| ||| || ||| |||||||  |||||||||| |||| |||||| || ||||||||||||| | ||||  |||||||| |||||||    
T  29813314 ctaggtgctgttattgttgattattgtttgtgttcactttgatattagttactacttttctttgctccacacatcatagtttgtattggtgtgagttttg 29813413  T
Q  296 aatccgaattcacaa 310  Q
    | |||||||||||||    
T  29813414 agtccgaattcacaa 29813428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 5236573 - 5236254
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||| |||||||| ||| | |||||||| |||||    
T  5236573 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgataatggattcgagagatcaatctttccccagattaggtcaatttgga 5236474  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    || |||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  ||||||||||||||| ||| ||||||    
T  5236473 ccaaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttgcttgtggatttgtgcttttcactttgattcctagattaga 5236374  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||   | ||||| ||| || |||||||||||  ||||||||| | ||| ||||||||| | ||||||||||| | ||||  |||||||| | ||||    
T  5236373 tctaggagctcttattgttgattattgcttgtgttcactttgatatcgattactactttcctgtactccacacatcatagtttgtattggtgtga-tttt 5236275  T
Q  295 gaatccgaattcacaataaat 315  Q
    || ||||||||||||| ||||    
T  5236274 gagtccgaattcacaacaaat 5236254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 7764519 - 7764832
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg-gacc 101  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||| ||  ||||    
T  7764519 aagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatgaatctctcctccagagtaggtcaaatttagacc 7764618  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| |||||||||||  |||||||||  |||||||| |||||||||||  ||||||||||||||| | | ||||||||    
T  7764619 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgtttgtggttttgtgcttttcactttgattccaagattagatc 7764718  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttga 296  Q
    |||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| | || |||||||| | ||||  |||||||| ||||||||    
T  7764719 taggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttacttcacacatcatagtttgtattggtgt-agttttga 7764817  T
Q  297 atcc-gaattcacaa 310  Q
     ||| ||||||||||    
T  7764818 gtccggaattcacaa 7764832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 40734549 - 40734863
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  40734549 gttgaacctaatttcttgtaacacatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttgg 40734648  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcctt-atcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||||||| | || |  |||| || ||||||  |||||||||||||| ||||||||||||||| ||||  |||| |||||||||| ||| ||||||    
T  40734649 accgaactgggtcaacaatctttggagtgtttgttcctctcttctctcctttatcttttgcttgtggatttgtgctttgcactttgattcctagattaga 40734748  T
Q  196 tctaggtattgtta-ttattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||  ||||| || || || || ||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | ||||    
T  40734749 tctaggtgctgttattttttattatttcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-tttt 40734847  T
Q  295 gaatccgaattcacaa 310  Q
    ||  ||||||||||||    
T  40734848 gagaccgaattcacaa 40734863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 23410442 - 23410133
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    ||||||||||| | |||| |||||||||| |||| || |||||| | |||| |||||||||||||||||||| || || | | |||||||||||||| ||    
T  23410442 aagctaatttcgtataacccatttgtatcactttgtaagaactcttagataatggattggagagataaatctctcccccaaattaggtcaagttggaacg 23410343  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttc--actttgattactaaattagatctag 200  Q
    || ||||| | || |  ||||||| ||||||| | ||||||| |||||||||||||||||||||||  ||||   ||||||||||||| |||||||||||    
T  23410342 aattgggtcaacaatctttggtgtgtttgtttatattctctctttatcttttgcttgtggttttgagttttttttactttgattactagattagatctag 23410243  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||| |||| || |||||||||||  |||||||||  |||| ||||||||| || |||||||||| | ||||  |||| ||| |||||||  |||    
T  23410242 gtgttgttaatatttttgttgcttgtgttcactttgatatatgttactactttcctttgatccacacatcatagtttgtattgatgtgagttttgtgtcc 23410143  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  23410142 gaattcacaa 23410133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 50 - 310
Target Start/End: Complemental strand, 27305777 - 27305521
Alignment:
Q  50 tgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctcctta 148  Q
    |||||||||||||||||||| ||||| || |||| |||||||||| ||||||||||||| |||  |||||||| |||| ||||||||||||||||  |||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtcaatttggaccgaactgtgtatacatttctttgtgtgtttgtttctcttctctattta 27305678  T
Q  149 tcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttatt 248  Q
    ||||||| |||||||||||   |||||||||| | | ||| ||||||||||||| | |||||| ||||| ||||||||  || ||||||||||||||| |    
T  27305677 tcttttgtttgtggttttgtgtttttcacttt-actcctagattagatctaggt-tggttattgttgttgttgcttgttgttactttgatattggttact 27305580  T
Q  249 actttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||| ||||||||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  27305579 actttcctttgctccacacatcatagttt--attggtgtga-ttttgagtccgaattcacaa 27305521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 53921616 - 53921422
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccg 102  Q
    |||||||||||||||||||||||||||||  ||| || |||||||||||||||||||||||||||| ||||| || ||   ||||| ||||||| |||||    
T  53921616 aagctaatttcttgtaactcatttgtatcattttgtaagaactcattgatagtggattggagagatcaatctctcccccggagtagatcaagtttgaccg 53921517  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||| ||| |||||||| |||| ||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||| ||| ||||||||    
T  53921516 aactggataaacatttcttagtgtgtttgtttctcttctctctttatattttgtttgtggttttgagcttttcactttgattcctagattagatc 53921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 115 - 310
Target Start/End: Complemental strand, 21351004 - 21350813
Alignment:
Q  115 atttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattatt 214  Q
    |||||||||||| ||||||||||||||| | ||||||| ||||||||||| ||| ||||||||||||||| ||| ||||||||||   | |||| |||||    
T  21351004 atttcttggtgtgtttgtttctcttctcactttatcttatgcttgtggttatgagcttttcactttgattcctagattagatcta---agtgttgttatt 21350908  T
Q  215 gtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||| ||| |||||||| ||||||||||||||| ||||||||| |||| |||||||||||  |||||||||||| |||||||| |||||||||||||    
T  21350907 gttgttgtttgtgtttactttgatattggttactactttcctttgcttcacacatcttt-atttcattggtgtgagttttgagtccgaattcacaa 21350813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 9581337 - 9581627
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    ||||||||||||| |||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||    
T  9581337 aagctaatttcttttaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggacc 9581436  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||| ||| ||||||  ||||||||||||  |||| || ||||||||||||||  |||||||||||||||  || ||||||||    
T  9581437 gaactgggtgaacaatctttgatgtgtttgtttctctcttctctccctttattttgtgcttgtggttttgtgcttttcactttgattcatagattagatc 9581536  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||  ||||||| ||| || ||||||||| |  ||||||||||||||| ||||||||| |||| |||||||| | ||||  ||||||||    
T  9581537 taggtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgcttcacacatcatagtttatattggtgt 9581627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 5260436 - 5260164
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||    
T  5260436 aagctaatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggacc 5260337  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||| ||| | || |  ||||||| |||||||||||  |||||||||  || ||||||||||||||| |  ||||||||||||||| ||||||||||||    
T  5260336 gaacttggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctaaattagatc 5260238  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||| |||||||| ||| || |||||||   |  ||||| ||||||||| ||||||||| |||||||||||||    
T  5260237 taggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatc 5260164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 29682414 - 29682700
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    ||||||||||||||| || |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | ||| |||||||||||||    
T  29682414 aagctaatttcttgtcacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattagatcaagttggaccg 29682513  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||| | || |  ||||||| | |||||||||  |||||  |||||||||||||||||||||||  |||||||||||||| |||  ||||||||||    
T  29682514 aactgggtcaacaatctttggtgtgtatgtttctctcttctccctttatcttttgcttgtggttttgagtttttcactttgattcctaggttagatctag 29682613  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||  || |||| ||||| |||||||| ||  |||| || ||| ||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  29682614 gtgctgctattgttgttattgcttgtattcactttaattttgattactactttcctttgctccacacatcatagtttgtattggtgt 29682700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 37408513 - 37408786
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || ||||||||||||||||||||| |||||| ||||| || |||| ||||||||||||| ||| |    
T  37408513 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcaagtttggatc 37408612  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| |||||||||||  |||||||||  |||||||||||||| ||| |  ||||||||||||||| ||| ||||||||    
T  37408613 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgatttagtgcttttcactttgattcctagattagatc 37408712  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||  ||||||| ||| || ||| ||||| |  |||| |||||||||| ||||||||| |||||||||||||    
T  37408713 taggtgctgttattgttgattattgtttgtgctcactttaatattggttactactttcctttgctccacacatc 37408786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 43 - 310
Target Start/End: Complemental strand, 2075149 - 2074885
Alignment:
Q  43 aactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttct 141  Q
    |||| |||||||||||||| ||||||| ||||| || || | |||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||    
T  2075149 aactaattgatagtggatttgagagatcaatctctccccgagagtaggtcaagttggatcgaactgggtaaacatttctgggtgtgtttatttctcttct 2075050  T
Q  142 ctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatatt 241  Q
    ||| ||||||||||||||||||||||   ||||||| ||| || ||| |||| |||| ||| || ||||| || || ||||||||| ||  |||||||||    
T  2075049 ctctttatcttttgcttgtggttttgtgtttttcac-ttgtttcctagattaaatctgggt-ttattattgttattgttgcttgtggttattttgatatt 2074952  T
Q  242 ggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||| ||||||||| ||||||||||||| | ||||| |||||||| | |||||  |||||||||||||    
T  2074951 ggttactactttcctttgctccacacatcatagtttt-attggtgtga-ttttgggtccgaattcacaa 2074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 5258257 - 5257985
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||    
T  5258257 aagctaatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggacc 5258158  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||| ||| | || |  ||||||| |||||||||||  |||||||||  || ||||||||||||||| |  ||||||||||||||| ||| ||||||||    
T  5258157 gaacttggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgcttttcactttgattcctagattagatc 5258059  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||  ||||||| ||| || |||||||  ||  ||||| ||||||||| ||||||||| |||||||||||||    
T  5258058 taggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttgctccacacatc 5257985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 32744549 - 32744335
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    ||||||||||||||||||||||||||||| |||| || |||||| |||||||||||||| |||||||||||| || || | | |||||||||||||||||    
T  32744549 aagctaatttcttgtaactcatttgtatcactttgtaagaactctttgatagtggattgaagagataaatctatcccccagattaggtcaagttggaccg 32744450  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| |||||||||| | |||| ||||||||||||||||||       |||||||||||||| ||| |||||||||||||    
T  32744449 aactgggtcaacaatctttggtgtgtttgtttctcatatctctttatcttttgcttgtggt-------ttttcactttgatttctagattagatctaggt 32744357  T
Q  203 attgttattattgtttttgctt 224  Q
     ||||||| |||||| ||||||    
T  32744356 gttgttatcattgttgttgctt 32744335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 287
Target Start/End: Complemental strand, 9636236 - 9635948
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga-ccgaa 104  Q
    ||||||||||||||| | ||||||||| ||| || |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| || |||||    
T  9636236 ctaatttcttgtaacccttttgtatctttttgtaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaa 9636137  T
Q  105 ctgggtaatcatt-tcttggtgtatttgtttctctt--ctctcc---ttatcttttgcttgtggttt-tgaacttttcactttgattactaaattagatc 197  Q
    |||||| | || | ||||||||| |||||||||||   ||||||   ||||||| |||||||| ||| ||  ||||||||||||||| ||| ||||||||    
T  9636136 ctgggtgaacaatctcttggtgtgtttgtttctctctgctctcccttttatcttgtgcttgtgatttatg--cttttcactttgattcctagattagatc 9636039  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  9636038 taggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 9635948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 45095218 - 45095490
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | ||||||||||||| |||||    
T  45095218 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggacc 45095317  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  |||| ||||||||||||||  |||||||||  |||||||||||||||||| |   ||| | ||||||||  || ||||||||    
T  45095318 gaactgggtgaacaatctttggcgtatttgtttctctattctctccttttatcttttgcttgtggttt-gtgttttactctttgattcatagattagatc 45095416  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    || ||  ||||||| ||| || ||||||||| |  ||||||||||||||| ||||||||| ||||| |||||||    
T  45095417 tatgtgctgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctctacacatc 45095490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34491263 - 34491374
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  34491263 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 34491362  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  34491363 accgaactgggt 34491374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 4570004 - 4570131
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgg 98  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||| ||| ||||    
T  4570004 ttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctactccagagtaggtgaagtttgg 4570103  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  4570104 accgaactgggtcaacatttcttggtgt 4570131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 6095715 - 6095589
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga 99  Q
    |||||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||    
T  6095715 ttgaagttaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgga 6095616  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    |||||||| || | |||||||||||||    
T  6095615 ccgaactgtgtgaacatttcttggtgt 6095589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 106 - 316
Target Start/End: Complemental strand, 51352143 - 51351937
Alignment:
Q  106 tgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtatt 205  Q
    ||||||| ||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||   |||||| ||||||| ||| ||||||||||||| ||    
T  51352143 tgggtaaacatttcttgatgtgtttgtttctcttctctctttatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggt-tt 51352046  T
Q  206 gttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaatt 305  Q
    |||||| ||| |  |||||||| || |||||||||||||||  |||||||| ||||||||||||| | || || |||| ||| | |||||| ||||||||    
T  51352045 gttattgttgctgctgcttgtgattactttgatattggttaccactttcctttgctccacacatcgtagtatt-attgatgtga-ttttgagtccgaatt 51351948  T
Q  306 cacaataaatt 316  Q
    ||||| |||||    
T  51351947 cacaacaaatt 51351937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 54593755 - 54593882
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||| ||||||||||    
T  54593755 gttgaagctaatttattgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtatgtcaagttgg 54593854  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    ||| |||||||| | |||||||||||||    
T  54593855 accaaactgggtgaacatttcttggtgt 54593882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 30236176 - 30236304
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  30236176 gttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 30236275  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    |||||||| ||| ||  ||||||||||||    
T  30236276 accgaactaggtcaacaatttcttggtgt 30236304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 46860525 - 46860653
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatcttt-ctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||| ||||| |||||||||  ||||    
T  46860525 gttgaagctaatttcttgtaacccatttgtatctctttgtaataactcattgatagtggattggagagatcaatctttcctccagagtaggtcattgttg 46860624  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||| ||| | | ||||| |||||||    
T  46860625 gaccgaattggatgaacattttttggtgt 46860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 40913352 - 40913455
Alignment:
Q  9 taatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaact 106  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||| | | ||| | |||||||||||||||||||||    
T  40913352 taatttcttgtaactcatttgtatctctttgtaagaactcatcgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaact 40913451  T
Q  107 gggt 110  Q
    ||||    
T  40913452 gggt 40913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44331596 - 44331707
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||  ||||||||||||||| || ||||| |||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  44331596 gttgaagctaatttcttgtaagccatttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 44331695  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  44331696 accgaactgggt 44331707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46173408 - 46173515
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||||||| ||||| | | ||| | |||||||||||||    
T  46173408 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 46173507  T
Q  99 accgaact 106  Q
    ||||||||    
T  46173508 accgaact 46173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43403862 - 43403749
Alignment:
Q  1 gttgaagctaatttcttgtaactcat-ttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    ||||||||| |||||||||||||||| || ||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||  |||    
T  43403862 gttgaagctcatttcttgtaactcatgttttatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtaggtcatggtt 43403763  T
Q  97 ggaccgaactgggt 110  Q
    ||||||||||||||    
T  43403762 ggaccgaactgggt 43403749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49199587 - 49199474
Alignment:
Q  1 gttgaagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| | |||||||  |||    
T  49199587 gttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagactaggtcatggtt 49199488  T
Q  97 ggaccgaactgggt 110  Q
    ||||||||||||||    
T  49199487 ggaccgaactgggt 49199474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 33191883 - 33192050
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttctccatagtaggtca-agttgga 99  Q
    ||||||||||| ||||||||||   ||| | ||| | | | |||||||||||||||||||| ||||||| ||||| |||||| || ||||||  ||||||    
T  33191883 gttgaagctaagttcttgtaaccattttatgtctttgtaaagaactcattgatagtggattagagagatcaatctctctccagaggaggtcattgttgga 33191982  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    |  |||| ||||| ||||| ||||||| ||||||||| |||||   |||||||||| |||||||||||    
T  33191983 caaaacttggtaaacattttttggtgtgtttgtttcttttctcgatttatcttttgtttgtggttttg 33192050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 266
Target Start/End: Complemental strand, 23200251 - 23199982
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||| ||| || |||||||||||||||| ||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  23200251 aagctaatttcttgtaacccttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggacc 23200152  T
Q  102 gaactgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||||| | || |  ||||||| |||||||   ||||  ||||||  ||||||| ||||||||| ||||   |||||| |||| || ||| ||||||    
T  23200151 gaactgggtgaacaatctttggtgtctttgttttcttcttccctctccttttatcttatgcttgtgg-tttgtgtttttcattttgtttcctagattaga 23200053  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    ||||||| || ||||| ||| || |||||||   |  ||||| ||||||||| ||||||||| |||||||||    
T  23200052 tctaggtgtt-ttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccaca 23199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 55302079 - 55301961
Alignment:
Q  11 atttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccgaactg 107  Q
    ||||||||||||  |||||||||||||| || ||| |||||||||||||||||||||||| ||||| | |||||||||||||||  |||||||||||||     
T  55302079 atttcttgtaacctatttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaactt 55301980  T
Q  108 ggtaatcatttcttggtgt 126  Q
    ||| | |||||||| ||||    
T  55301979 ggtgaacatttcttagtgt 55301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 9634763 - 9634666
Alignment:
Q  170 cttttcactttgattactaaattagatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    ||||||||||||||| ||| |||||||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  9634763 cttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaca 9634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 23198052 - 23197908
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||| ||| || |||||||||||||||| ||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  23198052 aagctaatttcttgtaacccttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggacc 23197953  T
Q  102 gaactgggtaatcatttcttggtgtatttgttt--ctcttctctc 144  Q
    ||||||||| | || |  ||||||| |||||||  ||||||||||    
T  23197952 gaactgggtgaacaatctttggtgtctttgttttcctcttctctc 23197908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43401919 - 43401806
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgt-atctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||| ||||| | |||||||| || ||||||||||||||||||||||||| || ||||| | ||||| |||||||||  |||    
T  43401919 gttgaagctaatttcttgtaacgcattttttatctctttgtaagaactcattgatagtggattggagaaattaatctctcctccagagtaggtcatggtt 43401820  T
Q  97 ggaccgaactgggt 110  Q
    ||||||||||||||    
T  43401819 ggaccgaactgggt 43401806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47304302 - 47304413
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||| |||| ||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||| ||||| || || | | ||||||||||| |    
T  47304302 gttgaagttaatatcttgtaacccatctgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaagtttg 47304401  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  47304402 accgaactgggt 47304413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 801148 - 801280
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||||||||| ||| |||||||||||  | ||||||||||||||||||||||||||   ||||| | ||||| ||||||||||| ||||||||    
T  801148 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 801247  T
Q  103 aactgggt-aatcatttcttggtgtatttgttt 134  Q
    |||||||| ||  || ||||||||| |||||||    
T  801248 aactgggtgaacaatctcttggtgtctttgttt 801280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 41819636 - 41819512
Alignment:
Q  5 aagctaatttcttgtaactca-tttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggac 100  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||| ||||||||||||||| || ||||| | ||||| |||||||||  |||||||    
T  41819636 aagctaatttcttgtaacccattttgtatctctttgtaagaactcatt-atagtggattggagacatcaatctctcctccagagtaggtcattgttggac 41819538  T
Q  101 cgaactgggtaatcatttcttggtgt 126  Q
    | |||||||| | ||||| |||||||    
T  41819537 caaactgggtgaacatttattggtgt 41819512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 7780114 - 7780024
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagtt 96  Q
    ||||||||||||||| | ||||||||||||||  | |||||||||||||||||||||||||| | ||||| | ||||| |||||||||||||    
T  7780114 ctaatttcttgtaac-cttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtt 7780024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36018903 - 36018970
Alignment:
Q  1 gttgaagctaatttcttgtaactca-tttgtatctcttt-taggaactcattgatagtggattggagag 67  Q
    ||||||| ||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||    
T  36018903 gttgaagttaatttcttgtaactcattttgtatctctttgtaagaactcatt-atagtggattggagag 36018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 6716554 - 6716662
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagag-ataaatctttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| ||||||||||||||||||| | |||   | ||||| ||||||||||| ||||||    
T  6716554 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggac 6716652  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  6716653 cgaactgggt 6716662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31340318 - 31340268
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcatt 50  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  31340318 gttgaagctaatttcatgtaactcatttgtatctctttgtaagaactcatt 31340268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 54635179 - 54635287
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagag-ataaatctttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| ||||||||||||||||||| | |||   | ||||| ||||||||||| ||||||    
T  54635179 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggac 54635277  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  54635278 cgaactgggt 54635287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 1305813 - 1305763
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  1305813 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 1305763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 1309718 - 1309668
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  1309718 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 1309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 32143185 - 32143135
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  32143185 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 32143135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 2671824 - 2671860
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2671824 tgctccacacatctttgttttcattggtgtgagtttt 2671860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 8477224 - 8477188
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8477224 tgctccacacatctttgttttcattggtgtgagtttt 8477188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 4055874 - 4055742
Alignment:
Q  9 taatttcttgtaac-tcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccata-gtaggtca-agttggaccga 103  Q
    |||||||||||||| || |||||||||||||   || |||||||||||||||||||| ||||||   || | | ||| | ||||||||  ||||| ||||    
T  4055874 taatttcttgtaacctcttttgtatctctttgtaagaaactcattgatagtggattgaagagatctctc-tcccccagatgtaggtcattgttgggccga 4055776  T
Q  104 actgggtaatcatttcttggtgtatttgtttctc 137  Q
    ||||||||| ||  ||||||||||||||||||||    
T  4055775 actgggtaaccaaatcttggtgtatttgtttctc 4055742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35138823 - 35138762
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggat 60  Q
    ||||||| |||||||||| ||||| ||||||||||||  | | |||||||||||||||||||    
T  35138823 gttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggat 35138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 8739302 - 8739331
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  8739302 tgctccacacatctttgttttcattggtgt 8739331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 9091540 - 9091569
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  9091540 tgctccacacatctttgttttcattggtgt 9091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 41510313 - 41510346
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatct 34  Q
    |||||||||||||||||||||||| |||||||||    
T  41510313 gttgaagctaatttcttgtaactcgtttgtatct 41510346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20937707 - 20937781
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatc 74  Q
    ||||||| |||||||||||||| | |||||||||||||   | ||||||||||||| | |||||||||||| ||||    
T  20937707 gttgaagttaatttcttgtaacccttttgtatctctttgaaaagaactcattgata-tagattggagagatcaatc 20937781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 40373033 - 40373069
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  40373033 tgctccacacacctttgttttcattggtgtgagtttt 40373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 36146524 - 36146214
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||||| ||||||| ||||| || || ||| |||||||||||||    
T  36146524 gttgaagctaatttct-gtaacccatttgtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcccccatattaggtcaagttgg 36146426  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| ||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  36146425 accgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggtttttagcttttcactttgattactagattagatct 36146326  T
Q  199 aggtattgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    || | |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  ||| |||||| ||||||     
T  36146325 agatgttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtatttgtgtaa-ttttgag 36146227  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  36146226 tccgaattcacaa 36146214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 41317547 - 41317240
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||  |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  41317547 aagctaatttcttgtaatccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccg 41317448  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  41317447 aactgggtcaacaatctttggtgtgtttgtttctcctctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggt 41317348  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccga 302  Q
     |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||| ||||| | ||||  |||||||| || ||||| | |||    
T  41317347 gttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccaaacatcatagtttgtattggtgtgagatttgagttcga 41317248  T
Q  303 attcacaa 310  Q
    ||||||||    
T  41317247 attcacaa 41317240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 31105510 - 31105202
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||||| ||||||||||||||||||||| || |||  ||||| |||||||||    
T  31105510 gttgaagctaatttcttgtaacccatttgtatctttttgtaagaactcattgatggtggattggagagataaatctctccccaagagtagatcaagttgg 31105411  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatc-ttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  31105410 accgaactgggtaaacatttcttggtctgtttgtttctcttctctccttatctttttgcttgtggttttgagcttttcactttgattcctagattagatc 31105311  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    | ||   |||| |||||||| |||||||||||| ||||||||||| ||| ||||||||| | ||||||||||| | ||||| |||||||| |||||||      
T  31105310 ttgg---tgttgttattgttgttgcttgtgtttactttgatattgattactactttcctttactccacacatcatagtttt-attggtgtgagttttgtg 31105215  T
Q  298 tccgaattcacaa 310  Q
    | |||||||||||    
T  31105214 ttcgaattcacaa 31105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 47676253 - 47675938
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||| |||||||||| ||||||||| ||||| || || ||| |||||||||||||    
T  47676253 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcaatgatagtggaatggagagatcaatctctcccccatattaggtcaagttgg 47676154  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||| | | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  47676153 accgaactggatcaacaatctttggtgtgtttgttcctctcttctctccatttatcttttgcttgtggttttgtgcttttcactttgattactagattag 47676054  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||    
T  47676053 atctaggtgttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagtttt 47675954  T
Q  295 gaatccgaattcacaa 310  Q
    |  |||||||||||||    
T  47675953 gtgtccgaattcacaa 47675938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 47674060 - 47673740
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || ||||| || |||||||||||    
T  47674060 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccatattaagtcaagttgga 47673961  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||||  | | || |  ||||||| ||||||  ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  47673960 ccgaactgaatcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtacttttcactttgattactagattaga 47673861  T
Q  196 tctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    ||||||| |||||||||||||| ||| |||||||  ||||||||||||||| ||||||| | || |||||||||| | ||||  |||||||| |||||||    
T  47673860 tctaggtgttgttattattgttgttgtttgtgttcactttgatattggttactactttcttttgttccacacatcatagtttgtattggtgtgagttttg 47673761  T
Q  296 aatccgaattcacaataaatt 316  Q
      |||||||||| || |||||    
T  47673760 tgtccgaattcataacaaatt 47673740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 14069946 - 14069635
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||  | |||||||||||||||||    
T  14069946 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaagttggaccg 14069847  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| |||||   ||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  14069846 aactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatct 14069747  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||||||| || |||||||||||| |||||| ||| |||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |    
T  14069746 aggtgttgttattattattgttgcttgtgtttactttgaaattagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagt 14069647  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  14069646 ccgaattcacaa 14069635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 14379974 - 14379663
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  14379974 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaggtcaagttggaccg 14379875  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| |||||   ||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  14379874 aactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttgtgcttgtggttttgagcttttcactttgattactagattagatct 14379775  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||||||| || |||||||||||| |||||| ||| |||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| |    
T  14379774 aggtgttgttattattattgttgcttgtgtttactttgaaattagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagt 14379675  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  14379674 ccgaattcacaa 14379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 6 - 310
Target Start/End: Complemental strand, 41649123 - 41648816
Alignment:
Q  6 agctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccga 103  Q
    ||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||    
T  41649123 agctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccga 41649024  T
Q  104 actgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    ||||||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  41649023 actgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattcctagattagatctagg 41648924  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    |  || |||| ||||| |||||||||||  |||||||||| |||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||||    
T  41648923 tgctgctattgttgttattgcttgtgttcactttgatattagttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccg 41648825  T
Q  302 aattcacaa 310  Q
    |||||||||    
T  41648824 aattcacaa 41648816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 8153397 - 8153664
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| || || | | ||||||||||||||| |    
T  8153397 aagctaatttcttgtaactcatttgtatctctttgtaataactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggactg 8153496  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || || ||||||||||    
T  8153497 aactgggtcaacaatctttggtgtgtttatttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattattagatcagatctaggt 8153596  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
     |||||||||||||| ||||||||| |  ||||||||||| ||| ||||||||| |||||||| ||||    
T  8153597 gttgttattattgttgttgcttgtgctcactttgatattgattactactttcctttgctccacgcatc 8153664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 38671335 - 38671027
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||| ||||||| |||||||||| |||| || ||||||||||||||||||||| |||||||||||| || || | | |||||||||||||||||    
T  38671335 aagctaatttattgtaacacatttgtatcactttgtaagaactcattgatagtggattgaagagataaatctatcccccaaaataggtcaagttggaccg 38671236  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||| | || |  ||||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  38671235 aactgggtcaacaatctttggtgtgtttgtttctctcttctctccttatcttttgcttgtggttttgagcttttcactttgattactagatttgatctag 38671136  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||| ||||||||  |||||||||||  ||||||| || |||| || |||||| ||||||||||||| | ||||  |||||||| | |||||| |||    
T  38671135 gtgttgtcattattgtcgttgcttgtgttcactttgatttttgttactattttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcc 38671037  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  38671036 gaattcacaa 38671027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 496100 - 495833
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  496100 gttgaagctaatttcttgcaacccatttgtatctctttataagaactcattgatagtggattggagagatcaatctctcccctatagtaggtcaagttgg 496001  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    || |||| |||| | || |  ||||||| ||||||||| ||||||| |||||| ||||||||| ||||  | |||||||||||||| ||| |||||||||    
T  496000 acagaaccgggtcaacaatctttggtgtgtttgtttcttttctctctttatctcttgcttgtgattttctatttttcactttgattcctagattagatct 495901  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    |||| |||||||| ||||| ||| |||||||| ||||||||||||||| ||||||||| |||||||||    
T  495900 aggtgttgttattgttgttattgtttgtgtttactttgatattggttactactttcctttgctccaca 495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 19502233 - 19502545
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||| |||||||| ||| |    
T  19502233 aagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaagtcaagtttggaac 19502332  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||| ||||| | || |  ||||||| |||||||||||  |||||||  |||| || |||||||||||||||  |||||||||||||||||| ||||||||    
T  19502333 gaagtgggtgaacaatctttggtgtgtttgtttctctcttctctccctttattttgtgcttgtggttttgagtttttcactttgattactagattagatc 19502432  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    ||||| |||||||||||||| |||||||| ||| |||||| |||||||| ||||||||| ||||||||||||| | ||||  ||| |||| ||||||||     
T  19502433 taggtgttgttattattgttgttgcttgtatttactttgaaattggttactactttcctttgctccacacatcatagtttgtattagtgtgagttttgag 19502532  T
Q  298 tccgaattcacaa 310  Q
    || ||||||||||    
T  19502533 tctgaattcacaa 19502545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 23565178 - 23564903
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||    
T  23565178 gttgaaactaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctctcctagagtaggtcaagttgg 23565079  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtgg-ttttgaacttttcactttgattactaaattagatc 197  Q
    || ||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||   |||||||||||||| ||| ||||||||    
T  23565078 actgaactgg-taatcatttcttggtgtgtttgtttctcttctctatttatcttttgcttgtggtttttgtgattttcactttgatttctagattagatc 23564980  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttt 277  Q
    ||||| |||   |||||||| ||||||||| || ||||||||||||| | |||||| ||   |||||||||||| |||||    
T  23564979 taggttttg---ttattgttgttgcttgtggttactttgatattggtcactacttttcttcactccacacatctatgttt 23564903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 24525598 - 24525351
Alignment:
Q  22 ctcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccat-agtaggtcaagttggaccgaactgggt-aatcattt 118  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||  | ||||||||||||||| ||||||||| ||| || |    
T  24525598 ctcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtcaagttggacggaactgggtcaataatct 24525499  T
Q  119 cttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt 218  Q
     ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  24525498 -ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattgttg 24525400  T
Q  219 ttgcttg-tgtttgctttgatattggttattactttcctctgctccaca 266  Q
    ||||||| ||||||||||||||||| ||| |||||| || |||| ||||    
T  24525399 ttgcttgttgtttgctttgatattgattactacttttctttgctacaca 24525351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 1113708 - 1114019
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||| |||||||||||| ||||| || || ||| ||||||||||| |    
T  1113708 gttgaagctaatttcttataacccatttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattaggtcaagtttg 1113807  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||| || || | || |  ||||||| ||||||||||||||| | ||||||||||||||||||||||   |||||| ||||||| ||| |||||||||    
T  1113808 accgaattgagtcaacaatctttggtgtgtttgtttctcttctccctttatcttttgcttgtggttttgtgtttttcattttgattcctagattagatct 1113907  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| || ||||| ||||| |||||||||||| |||||||||| ||||  |||||||| ||||||||||||| | ||||  |||| ||| |||||||| |    
T  1113908 aggtgttattattgttgttattgcttgtgtttactttgatattagttaccactttcctttgctccacacatcatagtttgtattgatgtgagttttgatt 1114007  T
Q  299 ccgaattcacaa 310  Q
    | ||||||||||    
T  1114008 cggaattcacaa 1114019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 23555091 - 23555408
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||||||||| | |||||| |||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  23555091 gttgaagctaatttcttgtaacacttttgtacctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 23555190  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||| | || |  ||| ||| |||||||||||  |||||||||  |||||||||||||||| |||   |||| ||||||||| ||| ||||    
T  23555191 gaccgaactgggtgaacaatctttgatgtgtttgtttctctcttctctccttttatcttttgcttgtggtattgtgttttttactttgattcctagatta 23555290  T
Q  194 gatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagtt 292  Q
    ||||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||    
T  23555291 gatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtgagtt 23555390  T
Q  293 ttgaatccgaattcacaa 310  Q
    |||| |||||||||||||    
T  23555391 ttgagtccgaattcacaa 23555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 26417367 - 26417683
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    ||||||| |||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| || |||   |||||||| |||||    
T  26417367 gttgaagataatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctccccaggttaggtcaaattgga 26417466  T
Q  100 ccgaactgggtaatca-tttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    || |||||||| | || ||||||||||| ||||||  ||||||||||||  ||||||||||||||||||||||| |||||||||||||||  || ||||     
T  26417467 ccaaactgggtcaacaatttcttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgagcttttcactttgattcatagattat 26417566  T
Q  195 atctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || ||||||||| || ||||||||||||||| ||||||||| | ||||||| ||| | ||||  |||||||| |||||    
T  26417567 atctaggtgctgttattgttgattattgcttgtggttactttgatattggttactactttcctttactccacatatcatagtttgtattggtgtgagttt 26417666  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  26417667 tgagtccgaattcacaa 26417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 31518965 - 31519256
Alignment:
Q  13 ttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc--atagtaggtcaagttggaccgaactggg 109  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||||  | |||||||||||||||||||||||||     
T  31518965 ttcttgtaactcatttgtatctctttgtaagaactcattgacagtggattggagagatcaatctctctccccagagtaggtcaagttggaccgaactgga 31519064  T
Q  110 taatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgtta 209  Q
    ||| ||||||||||||| |||||||||||||| || ||||||||||||||||        ||||||||||||||| ||| ||||||||||||| ||||||    
T  31519065 taaacatttcttggtgtgtttgtttctcttctttctttatcttttgcttgtg--------cttttcactttgattcctagattagatctaggtgttgtta 31519156  T
Q  210 ttattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcaca 309  Q
    ||||||||  ||||| || || | ||||||||  ||| || |||  | ||||||||||||| || |||||||||| || |||||||| ||| ||||||||    
T  31519157 ttattgttgctgcttatgattacattgatattaattactatttttatttgctccacacatc-ttattttcattggcgtgagttttgagtccaaattcaca 31519255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 3 - 310
Target Start/End: Complemental strand, 31733084 - 31732770
Alignment:
Q  3 tgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggac 100  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||| ||||| || || | | |||||||||||||||    
T  31733084 tgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatactggattggagagatcaatctctcccccaaattaggtcaagttggac 31732985  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||||| | || |  ||||||  ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  31732984 cgaactgggtcaacaatctttggtgagtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagat 31732885  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    |||    |||||||| ||| || |||||||||||  |||||| |||||||| ||||||| | ||||||||||||| | ||||  | |||||| |||||||    
T  31732884 ctaaaggttgttattgttgattattgcttgtgttcactttgaaattggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttg 31732785  T
Q  296 aatccgaattcacaa 310  Q
    | |||||||||||||    
T  31732784 agtccgaattcacaa 31732770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 43864295 - 43864609
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||| |||||| ||||||||||||||| ||  |||| |||||||||||||||||||||| ||||| ||||| | | |||||||||||||    
T  43864295 gttgaagctaatttcctgtaacccatttgtatctctttgtaaaaactaattgatagtggattggagagatcaatctctctcccagattaggtcaagttgg 43864394  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |   |||||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  43864395 accgaactgggtcaacaatagatggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattag 43864494  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || |||||||||||  ||||||||||| |||  |||||||| | ||||||||||| | ||||  |||||||| |||||    
T  43864495 atctaggtgctgttattgttgattattgcttgtgttcactttgatattgattaccactttcctttactccacacatcatagtttgtattggtgtgagttt 43864594  T
Q  294 tgaatccgaattcac 308  Q
    ||| |||||||||||    
T  43864595 tgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 4586212 - 4586528
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||| ||||| ||||||||| || |||||||||||||||||||||||||||| ||||| || || ||| || ||||| ||||    
T  4586212 gttgaagctaattttttgtaacccatttttatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattatgtcaacttgg 4586311  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    ||||||||||||   || |  || |||| ||||||  ||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  4586312 accgaactgggtcgacaatctttcgtgtgtttgttcctctcttctctccctttatcttttgtttgtggttttgtgcttttcactttgattactagattag 4586411  T
Q  195 atctaggtattgttatt-attgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| ||||||||  || || |||||||||||  |||||| ||||||||  |||||||| ||||||||||||| | |||| ||||||||| || ||    
T  4586412 atctaggtgttgttattgtttattattgcttgtgttcactttgaaattggttaccactttcctttgctccacacatcatagtttacattggtgtgagatt 4586511  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  4586512 tgagtccgaattcacaa 4586528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 48489482 - 48489797
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| |||||||||||||||  |  |||||||| |||||||||||||||||| ||||| || || | | |||||||||||||    
T  48489482 gttgaagctaatttcttgtaacccatttgtatctctttgcaataactcattcatagtggattggagagatcaatctctcccccagattaggtcaagttgg 48489581  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||||| || |  ||||||| ||||||  ||||||||| ||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  48489582 accgaactgggtaaacaatctttggtgtgtttgttcctctcttctcgccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattag 48489681  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||| |||||||| ||| || |||||  ||||  ||||||||||||||| ||||||||| ||||||||||||| | |||   |||||||| | |||    
T  48489682 atctaggtgttgttattgttgattattgctcatgttcactttgatattggttactactttcctttgctccacacatcatagttggtattggtgtga-ttt 48489780  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  48489781 tgagtccgaattcacaa 48489797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 18126699 - 18127013
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||  || ||||| || || | | ||||||||||| |||||    
T  18126699 aagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggaggaatcaatctctcccccagactaggtcaagtttgaccg 18126798  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct----tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    | |||||| | || |  ||||||| |||||| ||||    |||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  18126799 acctgggtcaacaatctttggtgtgtttgttcctctattttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattagat 18126898  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    |||||| |||||||| ||| || |||||||||||  ||||||||||| ||| ||||||||| | ||||||||||| | ||||  |||||||| |||||||    
T  18126899 ctaggtgttgttattcttgattattgcttgtgttcactttgatattgattactactttcctttactccacacatcatagtttgtattggtgtgagttttg 18126998  T
Q  296 aatccgaattcacaa 310  Q
    | |||||||||||||    
T  18126999 agtccgaattcacaa 18127013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 27347868 - 27348144
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||| ||||| || || | | |||||||||||||    
T  27347868 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattgcagagatcaatctctcccccagattaggtcaagttgg 27347967  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| ||||||  |||||||||||   ||||||||||||||||||||||   |||||||||||||| ||| |||||    
T  27347968 accgaactgggtcaacaatctttggtgtgtttgttcctctcttctctcactttatcttttgcttgtggttttgtgtttttcactttgattcctagattag 27348067  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||  ||||||| ||| || ||| |||||||  ||||||||||||||  ||||||||| |||||||||||||    
T  27348068 atctaggtgctgttattgttgattattgtttgtgttcactttgatattggttgctactttcctttgctccacacatc 27348144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 48491630 - 48491942
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttag-gaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| |  |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  48491630 gttgaagctaatttcttgtaacccatttgtatctctttgaaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttgg 48491729  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
     || |||| ||||| || |  ||| ||| |||||| |||||||||||  ||||||||||||||||||||||  ||||||| ||||||| ||| |||||||    
T  48491730 -ccaaacttggtaaacaatctttgatgtgtttgttcctcttctctccctttatcttttgcttgtggttttgtgcttttcattttgattcctatattagat 48491828  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttg 295  Q
    |||||  |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| | |||| |||||  | |||   |||||||| | |||||    
T  48491829 ctaggcgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttactccgcacattatagttggtattggtgtga-ttttg 48491927  T
Q  296 aatccgaattcacaa 310  Q
    |||||||||||||||    
T  48491928 aatccgaattcacaa 48491942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 25615908 - 25616199
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| ||||||||||  ||| || |||||||||||||||||||| ||||||| ||||| | ||||| ||||||||||| |||||||    
T  25615908 aagctaatttcttgtaacccatttgtatcattttgtaagaactcattgatagtggattagagagatcaatctctcctccagagtaggtcaagtttggacc 25616007  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttc-----tcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    ||||||||  | || |  ||||||| ||||||||     ||||||||| ||||||| ||||||||||||||  |||||||||| |||| ||| |||||||    
T  25616008 gaactgggcgaacaatctttggtgtgtttgtttctctcttcttctctctttatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagat 25616107  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||| ||||| | ||||  ||||||||    
T  25616108 ctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccatacatcatagtttgtattggtgt 25616199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 4253646 - 4253375
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctc-catagtaggtcaagttg 97  Q
    ||||||||||||||| |||||| | ||| |||||||||   | ||||||||||||| |||||| ||||||| ||||| || | || |||||||||| |||    
T  4253646 gttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggattagagagatcaatctctcccacagagtaggtcaatttg 4253547  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||| ||| ||||| |||||||||| ||||| ||||||| | |||||| ||| ||||||||    
T  4253546 gaccgaactaggtaaacatttcttggtgtgtttgtttctcttcactctttatcgtttgcttgtgcttttgtacttttcgc-ttgatttctatattagatc 4253448  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatct 271  Q
    ||||| || ||||||||||| |||| || | || ||||||||||||||| ||||||| | |||| |||||||||    
T  4253447 taggt-tttttattattgttgttgcctgaggttactttgatattggttaatactttcttttgctacacacatct 4253375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 23344026 - 23344292
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttag-gaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||||||||||| | || |||| |||||  | ||||||||||||| | ||||||||| || ||||| || ||| ||||||||||||||||    
T  23344026 gttgaagctaatttcttgtaaccctttagtatatctttgtgagaactcattgataatagattggagaaattaatctctc-ccagagtaggtcaagttgga 23344124  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    ||||||  ||||| ||||||||||||| | ||||||||||||||| |||||| || |||| |||||||   ||||||||||||||  || |||| |||||    
T  23344125 ccgaacaaggtaaacatttcttggtgtgtatgtttctcttctctctttatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatcta 23344224  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||| |||   |||||||| ||||||||| || ||| ||||||||||| ||||||||| |||||||||||||    
T  23344225 ggttttg---ttattgttgttgcttgtggttacttggatattggttactactttcctttgctccacacatc 23344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 29991108 - 29991397
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| ||  ||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||||||    
T  29991108 aagctaatttcttgtaacccttttgtatctctttctaataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggacc 29991207  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  |||||| |||||||| ||| ||||||||    
T  29991208 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgg-tttgtgcttttctctttgattcctatattagatc 29991306  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||| |||||||| ||| || || |||||| |  ||||||||||||||| |||||| || ||||||||||||| | ||||  ||||||||    
T  29991307 taggtgttgttattgttgattattacttgtgctcactttgatattggttactacttttctttgctccacacatcatagtttgtattggtgt 29991397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 36574633 - 36574363
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | ||| |||||||||   | ||||||||||||||||| |||||||||| ||||  || | | |||||||||| ||||    
T  36574633 gttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatccatccctagagtaggtcaatttgg 36574534  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||| |||||||||| ||||||||| ||| ||||||| ||||||||| ||||||||| ||||||||||||   ||||||| |||||| ||| |||||||||    
T  36574533 accaaactgggtaaacatttcttgatgtgtttgtttttcttctctctttatctttttcttgtggttttgtgtttttcac-ttgattcctagattagatct 36574435  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatct 271  Q
    | || |||||||| ||||| | || || | || ||||||||||||||| || |||||| || |||||||||||    
T  36574434 aagt-ttgttattgttgttgtggcctgagattactttgatattggttaatattttcctttgatccacacatct 36574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 35853969 - 35854243
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||    
T  35853969 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 35854068  T
Q  102 gaactgggtaatcatt-tcttggtgtatttgtttctct--tctctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||||| | || | ||||||||| |||||||||||  |||||||   ||||||| |||||||| ||||   |||||||||||| || ||| ||||||    
T  35854069 gaactgggtgaacaatctcttggtgtgtttgtttctctcttctctcccttttatcttgtgcttgtg-ttttatgcttttcactttgcttcctagattaga 35854167  T
Q  196 tctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||  ||||||| ||| || ||| |||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  35854168 tctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcctttgctccacacatc 35854243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 12097976 - 12097789
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgga 99  Q
    ||||||| |||||||||||||| |||||||||||||      ||||| ||| ||||||||||||||||| ||||| || || | | ||||||||||||||    
T  12097976 gttgaagttaatttcttgtaacccatttgtatctct------aactctttg-tagtggattggagagatgaatctctcccccagattaggtcaagttgga 12097884  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    ||||||| ||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  12097883 ccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattag 12097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 32358171 - 32358044
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  32358171 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 32358072  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  32358071 accgaactgggtgaacatttcttggtgt 32358044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 22270024 - 22270158
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  22270024 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactgattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 22270123  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt 133  Q
    |||||||||||| | ||| ||||||||| ||||||    
T  22270124 accgaactgggtgaacatctcttggtgtgtttgtt 22270158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 4508822 - 4508696
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgga 99  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||| || ||||||| ||||||||    
T  4508822 ttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgagagtggattggagagatcaatctcttcttcagagtaggttaagttgga 4508723  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||||| | |||||||||||||    
T  4508722 ccgaactgggtgaacatttcttggtgt 4508696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 2759314 - 2759127
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| || ||||| ||| ||| | |||||||||||||    
T  2759314 gttgaagctaatttcttgtaactcatttatatctctttgtaagaactcattgatagtggattggagatatcaatctcttccccagattaggtcaagttgg 2759215  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttga 182  Q
    |||||||| ||| | || |  ||||||| ||| ||  ||||||||||||  ||||||||||||| ||||||||  ||||| |||||||    
T  2759214 accgaacttggtcaacaatcattggtgtgtttctttctctcttctctccctttatcttttgcttatggttttgtgcttttaactttga 2759127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 29608788 - 29608915
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatc-tttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||  | ||||| |||||||||||||||    
T  29608788 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagatatcaatcactcctccagagtaggtcaagttgg 29608887  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    ||||||||| || |  ||||||||||||    
T  29608888 accgaactgagtgaatatttcttggtgt 29608915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 30024714 - 30024612
Alignment:
Q  154 tgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattacttt 253  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||| ||||||    
T  30024714 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactacttt 30024615  T
Q  254 cct 256  Q
    |||    
T  30024614 cct 30024612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 39731426 - 39731638
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  39731426 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 39731525  T
Q  104 actgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||| | || |  ||||||| |||||||  |||||  ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||    
T  39731526 actgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatc 39731624  T
Q  198 taggtattgttatt 211  Q
    ||||| ||||||||    
T  39731625 taggtgttgttatt 39731638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6360069 - 6359941
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||||||| ||||| ||| ||||| |||||||||||||    
T  6360069 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagttgattggagagatcaatctcttccccatattaggtcaagttgg 6359970  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    | |||||||||| ||  ||||||||||||    
T  6359969 atcgaactgggtcaacaatttcttggtgt 6359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 4178829 - 4179117
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgga-ccg 102  Q
    |||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||| | || | ||||| || |||| || |||||||||| || ||     
T  4178829 aagctaatttcttgtaacccttttgtatctctttgaagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtcaagtttgaacca 4178928  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||| ||| | || |  ||||||| |||||||||||  |||||||||  || ||||||||||||||| |   |||||||||||||| ||| |||||||||    
T  4178929 aactaggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggttt-gtgtttttcactttgattcctagattagatct 4179027  T
Q  199 aggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||  ||||||| ||| || ||||||   ||  ||||| ||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  4179028 aggtgctgttattgttgattattgcttacattcactttgttattggttactactttcctttgctccacacatcatagtttgtattggtgt 4179117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6432022 - 6432133
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| | || || |||||||||||||||    
T  6432022 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctccttcagagtaggtcaagttgg 6432121  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  6432122 accgaactgggt 6432133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 48599451 - 48599328
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||| ||||| | ||||| || || |||||||||    
T  48599451 gttgaagctaatttcttgtaactcatttgtatctctttggaagagctcattgatagtggattggagagatcaatctctcctccagagcagatcaagttgg 48599352  T
Q  99 accgaactgggtaatcatttcttg 122  Q
    |||||||||||| | |||||||||    
T  48599351 accgaactgggtgaacatttcttg 48599328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 25767074 - 25766798
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctctttt-aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | ||| ||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| || |||    
T  25767074 aagctaatttcttgtaaccccttttgtatctcttttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttagac 25766975  T
Q  101 cgaactgggt-aatcatttcttggtgtatttgtttctc--ttctctcc---ttatc-ttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    |||||||||| ||  || ||||||||| ||||||||||  ||||||||   ||||| |||||||||| | ||||   |||||||||||||  ||| ||||    
T  25766974 cgaactgggtgaacaatctcttggtgtgtttgtttctctattctctcccttttatctttttgcttgt-gatttgtgtttttcactttgatacctagatta 25766876  T
Q  194 gatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||||  ||||||| ||| || ||||||| | |  ||||| ||||||||| |||||| || |||||||||||||    
T  25766875 gatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttactacttttctttgctccacacatc 25766798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34310833 - 34310721
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| |||    
T  34310833 gttgaagctaatttcttgtaacacatttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 34310734  T
Q  98 gaccgaactgggt 110  Q
    |||||||||||||    
T  34310733 gaccgaactgggt 34310721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 3259050 - 3259173
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    |||||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||| ||||| | ||||| |||||||||||||| ||||    
T  3259050 aagctaatttattgtaactcatttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgaaccg 3259149  T
Q  103 aactgggtaatcatttcttggtgt 126  Q
    |||||||| | |||||| ||||||    
T  3259150 aactgggtgaacatttcctggtgt 3259173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 4510664 - 4510538
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgga 99  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||| || ||||| | ||  | ||||||||||||||||    
T  4510664 ttgaagctaatttcttgtaacccatttgtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaagttgga 4510565  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    ||| ||||||| | |||||||||||||    
T  4510564 ccgtactgggtgaacatttcttggtgt 4510538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 4512506 - 4512380
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgga 99  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||| || ||||| | ||  | ||||||||||||||||    
T  4512506 ttgaagctaatttcttgtaacccatttgtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtcaagttgga 4512407  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    ||| ||||||| | |||||||||||||    
T  4512406 ccgtactgggtgaacatttcttggtgt 4512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 48408857 - 48409134
Alignment:
Q  5 aagctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg-ga 99  Q
    |||||||||||||||||| | ||| |||||||||||  |  ||||||||||||||||||||||||| | ||||| || |||| |||| ||||||||  ||    
T  48408857 aagctaatttcttgtaaccccttttgtatctcttttgaaataactcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttaga 48408956  T
Q  100 ccgaactgggtaatca-tttcttggtgtatttgtttctct--tctctcc---ttatctttt-gcttgtggttttgaacttttcactttgattactaaatt 192  Q
    ||||||||||| | || ||||||||||| |||||||||||  |||||||   ||||||||| ||||||| ||| |  ||||||||||||||  ||| |||    
T  48408957 ccgaactgggtgaacaatttcttggtgtgtttgtttctctcttctctcccttttatctttttgcttgtgattt-gtgcttttcactttgatacctagatt 48409055  T
Q  193 agatctaggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||||||  ||||||| ||| || |||||||   |  ||||| ||||||||| ||||||||| |||||||||||||    
T  48409056 agatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatc 48409134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30024849 - 30024740
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatc-tttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||  | | ||| |||||||||||||||    
T  30024849 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatcactcccccagagtaggtcaagttgg 30024750  T
Q  99 accgaactgg 108  Q
    ||||||||||    
T  30024749 accgaactgg 30024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 2390333 - 2390461
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| ||  |||||||  |||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  2390333 gttgaagctaatttcttgtaacccatttgtatctctttgtaataactcatatatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 2390432  T
Q  99 accgaactgggt-aatcatttcttggtgt 126  Q
    |||||||| ||| ||| || |||||||||    
T  2390433 accgaactaggtgaataatctcttggtgt 2390461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2361089 - 2360978
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| || ||||| | | ||| | ||||||||||||     
T  2361089 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggatttgagatatcaatctctcccccagattaggtcaagttga 2360990  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  2360989 accgaactgggt 2360978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 8359427 - 8359305
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttggaccga 103  Q
    ||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||  ||||||||||    
T  8359427 ctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 8359328  T
Q  104 actgggtaatcatttcttggtgt 126  Q
    ||||||| | |||||||||||||    
T  8359327 actgggtgaacatttcttggtgt 8359305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 43504266 - 43504063
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||||||||| ||| |||||||||||  | |||||||||||||||| ||||||||| | ||||| | ||||||||||||||||| ||||| ||    
T  43504266 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtcaagtttggatcg 43504167  T
Q  103 aactgggt-aatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    |||||||| ||  || ||||||||| |||||||  |||||  ||||||  ||||||| ||||||| |||||   ||||||||||||||| ||| ||||||    
T  43504166 aactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatcttgtgcttgt-gttttatgcttttcactttgattcctagattaga 43504068  T
Q  196 tctag 200  Q
    |||||    
T  43504067 tctag 43504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22328508 - 22328379
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtca-agtt 96  Q
    |||||||||||||||||||||||| |||||||||||||   ||||| ||||| |||||||||| ||||||| ||||| || || | |||||||||  |||    
T  22328508 gttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtaggtcattgtt 22328409  T
Q  97 ggaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||||||||||  |||| |||||||    
T  22328408 ggaccgaactgggtaaatattttttggtgt 22328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 94 - 271
Target Start/End: Original strand, 40808734 - 40808910
Alignment:
Q  94 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    |||||||||||||| ||||  |||| ||||||| ||||||||| |||||||  |||||||||||||||||||||   ||| ||| |||  | ||| ||||    
T  40808734 gttggaccgaactgagtaaatattttttggtgtgtttgtttcttttctctctatatcttttgcttgtggttttgtgttttacac-ttgggtcctagatta 40808832  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcc-tctgctccacacatct 271  Q
     | ||||||  ||||||||||||| ||||||| |  | |||||||||| |||| |||||||| | ||||||||||||||    
T  40808833 aacctaggt-ctgttattattgttgttgcttgagaatactttgatatttgttactactttccttttgctccacacatct 40808910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 30814530 - 30814598
Alignment:
Q  43 aactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccgaactgggt 110  Q
    ||||||||||||||||||||||||||| ||||| | | ||||| |||||||||||||||||||||||||    
T  30814530 aactcattgatagtggattggagagatcaatctctcccccatattaggtcaagttggaccgaactgggt 30814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 20343951 - 20344059
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcatt-gatagtggattggagagataaatctttc-tccatagtaggtcaagttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | ||||||||| |||||||||||||||||   ||||| || |||| |||||||||||||||||    
T  20343951 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagttggac 20344049  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  20344050 cgaactgggt 20344059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 26639419 - 26639544
Alignment:
Q  43 aactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttc 140  Q
    ||||| |||||| |||||| ||||||| ||||| || ||||||||| ||||  |||| |||||||||| |||  | |||||||||  ||||||||||||     
T  26639419 aactctttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaaaaattcttggtgcgtttgtttctctta 26639518  T
Q  141 tctccttatcttttgcttgtggtttt 166  Q
    |||| ||| |||||||||||||||||    
T  26639519 tctctttaccttttgcttgtggtttt 26639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 31518847 - 31518905
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtgga 59  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  31518847 ttgaagctagtttcttgtaactcatttgtatctctttgtaagaactcattgacagtgga 31518905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 5513705 - 5513640
Alignment:
Q  78 ctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctct 143  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||  || ||||||||||||||||    
T  5513705 ctccagagtaggtcaatttggactgaactgggtaaacatttcttgacgtgtttgtttctcttctct 5513640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 1560734 - 1560646
Alignment:
Q  49 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggtaatc-atttcttggtgtatttgttt 134  Q
    |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||||||||||| | || |||||||||||||||||    
T  1560734 ttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgtatttgttt 1560646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 12097084 - 12097020
Alignment:
Q  192 tagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcct 256  Q
    ||||||||||| ||||| |||||||| ||| |||||||  ||||||||||||||| |||||||||    
T  12097084 tagatctaggtgttgttgttattgttgttgattgtgttcactttgatattggttactactttcct 12097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5116655 - 5116731
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct 75  Q
    ||||||| |||||| ||||||  | |||||||||||||   | |||||||||||||||| |||||||||||||||||    
T  5116655 gttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtgaattggagagataaatct 5116731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 18408628 - 18408578
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  18408628 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 18408578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 1533678 - 1533714
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1533678 tgctccacacatctttgttttcattggtgtgagtttt 1533714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 3904477 - 3904418
Alignment:
Q  106 tgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttt 165  Q
    ||||||| ||||||||||| | |||||||||||| | || |||||||||| |||||||||    
T  3904477 tgggtaaacatttcttggtatgtttgtttctcttatatctttatcttttggttgtggttt 3904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 20357785 - 20357820
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttt 293  Q
    |||||||||||||||||||||||||||||| |||||    
T  20357785 tgctccacacatctttgttttcattggtgtgagttt 20357820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Complemental strand, 3047114 - 3047085
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  3047114 tgctccacacatctttgttttcattggtgt 3047085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 18396415 - 18396488
Alignment:
Q  46 tcattgatagtggattggagagataaatct-ttctccatagtaggtcaa-gttggaccgaactgggtaatcatt 117  Q
    |||||||||| ||||||||||||| ||||| | ||| | |||||||||| | ||||||||||||||||| ||||    
T  18396415 tcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaacatt 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 18413505 - 18413455
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||| ||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  18413505 tgctcctcacatctttgtttacattggtgtgagtttt--atccgaattcacaa 18413455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 6430442 - 6430494
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  6430442 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 6430494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 21645870 - 21645834
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  21645870 tgctccacacatctttgtttacattggtgtgagtttt 21645834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 27073868 - 27073904
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||| |||||||||||||||| |||||||||||||    
T  27073868 ttgaagttaatttcttgtaactcttttgtatctcttt 27073904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 27204445 - 27204409
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||| |||||||||||||||| |||||||||||||    
T  27204445 ttgaagttaatttcttgtaactcttttgtatctcttt 27204409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 33162567 - 33162256
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||| | || |||||||||||||||||||| ||||||| ||||| || || | | |||||||||||||    
T  33162567 gttgaagctaatttcttgtaacccatttgtatctctctgtaagaactcattgatagtggattagagagatcaatctctcccctagattaggtcaagttgg 33162468  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| ||| | || |  ||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33162467 accgaactaggtcaacaatctttggtgtgtttgtttctcttctctatttatcttttgcttgtggttttgagcttttcactttgattactagattagatct 33162368  T
Q  199 aggtattgttattattgtttttgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||| ||| | ||||||     
T  33162367 aggtgttgttattattgttgttgcttgttgtttgctttgatattggttactactttcctttgctccacacatcatagtttgtattgatgtga-ttttgag 33162269  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  33162268 tccgaattcacaa 33162256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 723857 - 723549
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||||||    
T  723857 aagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccg 723758  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  723757 aactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctag 723658  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||||||||||| ||| |||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||    
T  723657 gtgttgttattattgttgttgattgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcc 723559  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  723558 gaattcacaa 723549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 316
Target Start/End: Complemental strand, 34139884 - 34139569
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggacc 101  Q
    |||||||||||||||||| ||| |||||| |||||  | |||||||||||||||||||||||||||| ||||| || || | | ||||||||||||||||    
T  34139884 aagctaatttcttgtaacccatatgtatcccttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggacc 34139785  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    ||||||||| | || |  ||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34139784 gaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatcta 34139685  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    ||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||    
T  34139684 ggtcttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtc 34139586  T
Q  300 cgaattcacaataaatt 316  Q
    ||||||||||| |||||    
T  34139585 cgaattcacaacaaatt 34139569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 36773613 - 36773924
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||| || || | | || ||||||||||    
T  36773613 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattatgtcaagttgg 36773712  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||    
T  36773713 accgaactgggtcaacaatctttggtgtgtttgtttctcttctttctttatcttttgcttgtggttttgagcttttcttttttattactagattagatct 36773812  T
Q  199 aggtattgttattattgtttttgctt-gtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    |||| |||||||||||||| ||||||  |||| |||||||||||||||| ||||||| | ||||||||||||| | ||||  |||||||| | |||||||    
T  36773813 aggtgttgttattattgttgttgcttcttgttggctttgatattggttactactttcatttgctccacacatcatagtttgtattggtgtga-ttttgaa 36773911  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  36773912 tccgaattcacaa 36773924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 11067360 - 11067627
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||| ||| ||||||| |||||| ||||| || || | | |||||||||||||||||    
T  11067360 aagctaatttcttgtaacccatttgtatctctttgtaagaactcatttataatggattgaagagatcaatctctcccccagattaggtcaagttggaccg 11067459  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||| ||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11067460 aactcggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggt 11067559  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
     |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  11067560 gttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgctccacacatc 11067627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 36318126 - 36317815
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |  | |||||||||||||||    
T  36318126 gttgaaactaatttattgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccttagagtaggtcaagttgg 36318027  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||| ||||||| |||||| || ||||||||||||||||||||||  ||||||||||||||||||| |||| ||||    
T  36318026 accgaactgggtcaacaatctttggtgtgtttgtttatcttctttctttatcttttgcttgtggttttgtgcttttcactttgattactagattaaatct 36317927  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||||||| | |||||||||||| |||||| |||||||| ||||||| | || || ||||||| ||||||  |||||||| |||||||| |    
T  36317926 aggtgttgttattattgctgttgcttgtgtttactttgaaattggttactactttcatttgttctacacatcattgtttgtattggtgtgagttttgagt 36317827  T
Q  299 ccgaattcacaa 310  Q
    || |||||||||    
T  36317826 ccaaattcacaa 36317815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 2334535 - 2334220
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  2334535 gttgaagctaatttctagtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 2334436  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    ||||||||||||  | || |  ||||||| |||||||||||  |||||||  ||||||| |||||||||||||||| |||||||||||||||| | ||||    
T  2334435 gaccgaactgggggaacaatctttggtgtgtttgtttctctcttctctccctttatcttgtgcttgtggttttgaagttttcactttgattaccagatta 2334336  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| |||||||| ||||||||| |||| |||||||| | ||||  |||||||| | |||    
T  2334335 gatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactactttcctttgcttcacacatcatagtttgtattggtgtga-ttt 2334237  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| || ||||||||||    
T  2334236 tgagtctgaattcacaa 2334220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 11151704 - 11151397
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || |||||| | ||||||||||||||||||| || || || || | | |||||||||||||||||    
T  11151704 aagctaatttcttgtaacccatttgtatcactttgtaagaactcttagatagtggattggagagatcaacctctcccccagattaggtcaagttggaccg 11151605  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggt 202  Q
    |||||||| | || |  ||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |    
T  11151604 aactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgtttgtggttttgagcttttcactttgattactagattagatctagct 11151505  T
Q  203 attgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccga 302  Q
     |||||||||||||| |||||||||||  ||||||||||| ||| ||||||  | ||||||||||||| | ||||  |||||| | |||||||| | |||    
T  11151504 gttgttattattgttgttgcttgtgttcactttgatattgattactacttttatttgctccacacatcatagtttgtattggtatgagttttgagttcga 11151405  T
Q  303 attcacaa 310  Q
    ||||||||    
T  11151404 attcacaa 11151397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 14633939 - 14633652
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggacc 101  Q
    |||||||||||||||||| |||||||||| |||||  | |||||||| ||||||||||||||||||| ||||| || || | | ||||||||||||||||    
T  14633939 aagctaatttcttgtaacccatttgtatcccttttgtaagaactcatagatagtggattggagagatcaatctctcccccagattaggtcaagttggacc 14633840  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatcta 199  Q
    |||||| || | || |  ||||||| |||||||||||  |||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  14633839 gaactgagtcaacaatctttggtgtgtttgtttctctattctctctttatcttttgattgtggttttgagcttttcactttgattactagattagatcta 14633740  T
Q  200 ggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||| |||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||| |||||||| | ||||  ||||||||    
T  14633739 ggtgttgttattattgttgttgcttgtgttcactttgatattggttactactttcctttgcttcacacatcatagtttgtattggtgt 14633652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 43 - 310
Target Start/End: Original strand, 39284930 - 39285200
Alignment:
Q  43 aactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccgaactgggtaatca---tttcttggtgtatttgtttctct 138  Q
    ||||||||||||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||| | ||   |||  |||||| |||||||||||    
T  39284930 aactcattgatagtggattggagagatcaatctctcccccagattaggtcaagttggaccgaactgggtcaacaatctttaatggtgtgtttgtttctct 39285029  T
Q  139 tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgat 238  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||     
T  39285030 tctctctttatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaa 39285129  T
Q  239 attggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||| |||||| || ||||||||||||| | ||| | |||||| | |||||| | |||||||||||||    
T  39285130 attggttactacttttctttgctccacacatcatagttgt-attggtatgagttttaagtccgaattcacaa 39285200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 310
Target Start/End: Complemental strand, 36988186 - 36987877
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaa 104  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||    
T  36988186 ctaatttcttgtaactcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 36988087  T
Q  105 ctgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||| | || |  ||||||| |||||||||||  |||||||||  ||||||||||||||| ||||  ||||||||||||||| ||| |||||||||||    
T  36988086 ctgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggctttgtgcttttcactttgattcctagattagatctag 36987987  T
Q  201 gtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatc 299  Q
    || |||||||| ||| || |||||||||||| |||||| |||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| ||    
T  36987986 gtgttgttattgttgattattgcttgtgtttactttgaaattggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtc 36987888  T
Q  300 cgaattcacaa 310  Q
    |||||||||||    
T  36987887 cgaattcacaa 36987877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 42362407 - 42362711
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||  |||| || || | | ||||||||||||||||     
T  42362407 aagctaatttcttgtaacccatttgtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagattaggtcaagttggacc- 42362505  T
Q  103 aactgggtaatcatttcttggtgtatttgtttctc--ttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
       ||||| | || |  ||||||| ||||||||||  ||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  42362506 ---tgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgcttgtggttttgagtttttcactttgattactagattagatctag 42362602  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||||||||||| ||||||| |||  ||||||| ||||||| ||||||||| ||||||||||||| | ||||  |||||||| | |||||| |||    
T  42362603 gtgttgttattattgttgttgcttgagttcactttgattttggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtcc 42362701  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  42362702 gaattcacaa 42362711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 17057486 - 17057171
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  17057486 gttgaagctaattttttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtcaagttgg 17057387  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||| ||||  |||||||  ||||||||||||||||||||||  ||||||||||| ||| ||| |||||    
T  17057386 accgaactgggtcaacaatctttggtgtgtttgttcctctcgtctctccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattag 17057287  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||| ||||||| |  |||  |||||||| | |||    
T  17057286 atctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtga-ttt 17057188  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  17057187 tgagtccgaattcacaa 17057171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 17085469 - 17085154
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || || | | |||||||||||||    
T  17085469 gttgaagctaattttttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtcaagttgg 17085370  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||| ||||  |||||||  ||||||||||||||||||||||  ||||||||||| ||| ||| |||||    
T  17085369 accgaactgggtcaacaatctttggtgtgtttgttcctctcgtctctccctttatcttttgcttgtggttttgtgcttttcactttaattcctagattag 17085270  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||| ||||||| |  |||  |||||||| | |||    
T  17085269 atctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctctacacatcatattttgtattggtgtga-ttt 17085171  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  17085170 tgagtccgaattcacaa 17085154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 29867924 - 29868235
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||| ||||| | | ||| | |||||||||||||||||    
T  29867924 aagctaatttcttgtaacccatttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccaaattaggtcaagttggaccg 29868023  T
Q  103 aactgggt-aatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||| ||| || | ||| ||| ||||||  ||||||||||||  ||||||| |||||||||||||||  |||||||||||||||||| ||||||||    
T  29868024 aactgggtcaataatct-ttgatgtgtttgtttctctcttctctccgtttatcttgtgcttgtggttttgagtttttcactttgattactagattagatc 29868122  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaa 297  Q
    ||||| |||||||||||||| |||||||||||| |||| | |||| ||| |||||| || ||||||||||||| | ||||  |||| ||| |  |||||     
T  29868123 taggtgttgttattattgttgttgcttgtgtttactttaaaattgattactacttttctttgctccacacatcatagtttgtattgctgtgaaatttgag 29868222  T
Q  298 tccgaattcacaa 310  Q
    |||||||||||||    
T  29868223 tccgaattcacaa 29868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 38312291 - 38312600
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| ||||| || || | | || ||||||||||    
T  38312291 gttgaaactaatttcttgtaacccatttgtatctctttgtaagatctcattgatagtggattggagagatcaatctctcccccagattatgtcaagttgg 38312390  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||| ||| ||||||  ||||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  38312391 accgaactgggtcaacaatctttgatgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgcttttcactttgattcctagattag 38312490  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| ||||||||||||| ||||||  |||||||| | |||    
T  38312491 atctaggtgctgttattgttgattgttgcttgtgttcactttgatattggttactactttcctttgctccacacatcattgtttatattggtgtga-ttt 38312589  T
Q  294 tgaatccgaat 304  Q
    ||| |||||||    
T  38312590 tgagtccgaat 38312600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 11049604 - 11049888
Alignment:
Q  1 gttgaagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttg 97  Q
    ||||||||||||||||| |||| | ||| |||||||||| || ||||||||||||||| ||||| | |||| ||||| || | |||| |||||||| |||    
T  11049604 gttgaagctaatttcttataacccttttagtatctctttgtaagaactcattgatagtagattgaaaagatcaatctctccttcataataggtcaaattg 11049703  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||| ||||||||||| |||||||| |||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  11049704 gactgaactgggtaaacatttctttgtgtgtttgtttctcttctctctttatattttgcttgtggttttgtacttttcactttgattcctagattagatc 11049803  T
Q  198 taggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    |||||    ||||||||||| |||||| || || ||||||||||||||| ||||||| | |||||||| |||| | ||||| ||||||||    
T  11049804 taggt----ttattattgttgttgcttatgattactttgatattggttactactttcttttgctccacgcatcatagtttt-attggtgt 11049888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 45099810 - 45100081
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  45099810 aagctaatttcttgtaactcttttgtatctctttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 45099909  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| ||||||  ||||||||||||  |||| |||||||||| | ||||  ||||||||||||||| ||| |||||||||    
T  45099910 aactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgt-gatttgtgcttttcactttgattcctagattagatct 45100008  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||  ||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  45100009 aggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatc 45100081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 6595123 - 6594806
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-g 97  Q
    |||||||||||||||||||||| | |||| |||||||| || |||||| ||||||||||||||||||||| ||||| || |||| ||||||||||||| |    
T  6595123 gttgaagctaatttcttgtaacccttttgaatctctttgtaagaactcgttgatagtggattggagagatcaatctctcctccagagtaggtcaagtttg 6595024  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctct--tctctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaatt 192  Q
    |||||||||| || | || |  ||||||| |||||||||||  |||||||   ||||||||||||||||||||||  ||||||||||||||| ||| |||    
T  6595023 gaccgaactgagtgaacaatctttggtgtgtttgtttctctcttctctcccttttatcttttgcttgtggttttgtgcttttcactttgatttctagatt 6594924  T
Q  193 agatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagt 291  Q
    ||||||||||  ||||||| ||| || || ||||||||  ||||||||||||||| |||||| || ||||||||||||| | ||||  |||||||| | |    
T  6594923 agatctaggtgctgttattgttgattattacttgtgttcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgtga-t 6594825  T
Q  292 tttgaatccgaattcacaa 310  Q
    ||||| ||| |||||||||    
T  6594824 tttgagtccaaattcacaa 6594806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 310
Target Start/End: Original strand, 11690556 - 11690854
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| |||||||||| |||| || ||| || ||||||||||||||||||||| || || | | ||||| || ||||||||||||||    
T  11690556 aagctaatttcttgtaacccatttgtatccctttgtaagaaatcgttgatagtggattggagagatcaacctctcccccatattacgtcaagttggaccg 11690655  T
Q  103 aactgggtaatcatttcttggtgt-atttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctagg 201  Q
    |||||| | | || |  |||||||  ||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||    
T  11690656 aactggatcaacaatctttggtgtgttttgtttctcttctccctttatcttttgcttgtggttttgagcttttcactttaattcctagattagatctagg 11690755  T
Q  202 tattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccg 301  Q
    | ||||||         |||||||||||  | |||||||| |||| ||||||||| ||||||||||||| | ||||  |||||||| |||||||| ||||    
T  11690756 tgttgtta---------ttgcttgtgttcac-ttgatattagttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccg 11690845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 36205777 - 36205506
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||||| ||||||||||||| | ||||||||||| || ||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  36205777 aagctaatttcttgtaactcttttgtatctctttgaagaactcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggaccg 36205678  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttt-tgaacttttcactttgattactaaattagatc 197  Q
    |||||||| | || |  ||||||| ||||||  ||||||||||||  |||| ||||||||||||||| ||  ||||||||||||||| ||| ||||||||    
T  36205677 aactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtggtttctg--cttttcactttgattcctagattagatc 36205580  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||  ||||||| ||| || |||||||||||  ||||| ||||||||| ||||||||| |||||||||||||    
T  36205579 taggtgctgttattgttgattattgcttgtgttcactttgttattggttactactttcctttgctccacacatc 36205506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 26353235 - 26353495
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| | ||||||||| ||| || | |||||||||||||||||||||||||| | ||| || |  | |||||||||||||||    
T  26353235 gttgaagctaatttcttgtaacacttttgtatctttttgtaagtactcattgatagtggattggagagatcactctctcccttagagtaggtcaagttgg 26353334  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||||||| |||||| ||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||     |||||||||    
T  26353335 accgaaccgggtaaacattttttg-tgtgtttgtttctctcctctccttatcttttgcttgtggttttgtgtttttcactttgatt-----attagatct 26353428  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacaca 268  Q
    | || |||   |||||||| || |||||| || |||| |||||||||| ||||||||| ||||| |||||    
T  26353429 aagttttg---ttattgttgttccttgtgattactttaatattggttactactttcctttgctctacaca 26353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 269
Target Start/End: Complemental strand, 4503245 - 4502975
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  4503245 aagctaatttcttgtaactcttttgtatctctttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 4503146  T
Q  103 aactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||| ||||||| ||||||  |||||||||||| || ||| |||||||||    
T  4503145 aactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttgtgcttgt-gttttgtgcttttcactttgtttcctagattagatct 4503047  T
Q  199 aggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    ||||  ||||||| ||| || |||||||  ||  ||||| ||||||||| ||||||||| | ||||||||||    
T  4503046 aggtgctgttattgttgattattgcttgcattcactttgttattggttactactttcctttactccacacat 4502975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 310
Target Start/End: Original strand, 24885770 - 24885951
Alignment:
Q  128 tttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtg 227  Q
    ||||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||| |||||| || ||||||    
T  24885770 tttgtttctcttctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattgttgtttcttgtg 24885869  T
Q  228 tttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||  ||||||||||||||| || |||||| |||| |||||||| | ||||  |||||||| | |||||| |||||||||||||    
T  24885870 ttcactttgatattggttactattttcctttgctacacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaa 24885951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17490265 - 17490096
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||| |||||| ||||| || || | |||||||||| ||||    
T  17490265 gttgaagctaatttcttgtaactcttttgtaactctttgtaagaactcattgatagtggattgtagagatcaatctctcccctagagtaggtcaatttgg 17490166  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttga 168  Q
    |||||||||||||| ||||||||  | | ||||||||||||||||| ||||| |||||||||||||||||    
T  17490165 accgaactgggtaaacatttcttaatatgtttgtttctcttctctctttatcatttgcttgtggttttga 17490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 5723369 - 5723080
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    ||||||||||||||||||   ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||| |||||||    
T  5723369 aagctaatttcttgtaacctttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggacc 5723270  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctc--ttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||||||  ||||||||  ||||||||||||||||| ||||  ||||||  ||||||| ||| ||||||||    
T  5723269 gaactgggtgaacaatctttggtgtgtttgtttctctattctctccttttatcttttgcttgtgg-tttgtgcttttctttttgattcctagattagatc 5723171  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||| |||||||| ||| || ||| ||||| |  ||||||||||||||| |||||| || ||||||||||||| | ||||  ||||||||    
T  5723170 taggtgttgttattgttgattattgtttgtgctcactttgatattggttactactttactttgctccacacatcatagtttgtattggtgt 5723080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7815390 - 7815231
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||| ||||| ||  |||||||  |||| |||||    
T  7815390 gttgaagctaatttcttgtaactcttttgtatctctttgtaagaactcatttatagtggattggagagattaatctctccacatagtatatcaaattgga 7815291  T
Q  100 ccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttg 159  Q
    | |||||||||||  |||||||||||| |||||||||||||| || ||||||||||||||    
T  7815290 ctgaactgggtaaatatttcttggtgtgtttgtttctcttctttctttatcttttgcttg 7815231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 266
Target Start/End: Complemental strand, 14202440 - 14202269
Alignment:
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgttt--ctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||||| | || |  ||||||| |||||||  |||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  14202440 ggaccgaactgggtcaacaatctttggtgtgtttgtttatctcttctctctttatcttttgcttgtggttttaagcttttcactttgattactagattag 14202341  T
Q  195 atctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccaca 266  Q
    |||||||| |||||||||||||| ||||||| |||  ||||||||||| ||| ||||||||| | |||||||    
T  14202340 atctaggtgttgttattattgttgttgcttgcgttcactttgatattgattactactttcctttactccaca 14202269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 2838132 - 2838272
Alignment:
Q  130 tgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtt 229  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||| |||||||| ||||| ||| |||||||    
T  2838132 tgtttctcttctcactttatcttttgcttgtggttttgagcttttcactttgattcctagattatatctaggtgttgttattgttgttgttgtttgtgtt 2838231  T
Q  230 tgctttgatattggttattactttcctctgctccacacatc 270  Q
    | |||||||| |||||| ||||||||| | |||||||||||    
T  2838232 tactttgatagtggttactactttcctttactccacacatc 2838272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 12123607 - 12123434
Alignment:
Q  94 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaatta 193  Q
    |||||||||||||| ||||  ||||||||| || |||||||||||| |||| |||||||||||||||| ||||| | ||||||| |||||| ||| ||||    
T  12123607 gttggaccgaactgagtaaatatttcttggcgtgtttgtttctcttatctctttatcttttgcttgtgattttgtatttttcac-ttgatttctagatta 12123509  T
Q  194 gatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    ||| ||||| |||||||| ||||| ||| ||| | || ||||||||||||||| ||||||||| ||||||||||||    
T  12123508 gatataggt-ttgttattgttgttgttgtttgaggttactttgatattggttactactttcctttgctccacacat 12123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 35447001 - 35446874
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| | ||| || |||| |||||||||||||||    
T  35447001 gttgaatctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcactctctcctccagagtaggtcaagttgg 35446902  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  35446901 accgaactgggtgaacatttcttggtgt 35446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 4484444 - 4484169
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||||||||  || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||    
T  4484444 aagctaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 4484345  T
Q  101 cgaactgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
     ||||||||| | || |  ||||||| |||||||   ||||  ||||||  ||||||| |||||||||||||   |||||||||||| || ||| |||||    
T  4484344 agaactgggtgaacaatctttggtgtctttgttttcttcttccctctccttttatcttgtgcttgtggtttt-tgcttttcactttgtttcctagattag 4484246  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||| |||||||| ||| || |||||||   |  ||||| ||||||||| ||||||||| |||||||||||||    
T  4484245 atctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactttcctttgctccacacatc 4484169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45726980 - 45727091
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||||  |||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  45726980 gttgaagctaatttcttgtaacctatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 45727079  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  45727080 accgaactgggt 45727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 1345602 - 1345730
Alignment:
Q  84 agtaggtcaagttggaccgaactgggtaatca-tttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttga 182  Q
    |||||||||  |||||||||||||||| | || ||||||||||| ||||||||||||||| | ||||||| || |||||||||||| |||||||||||||    
T  1345602 agtaggtcatattggaccgaactgggtcaacaatttcttggtgtgtttgtttctcttctcactttatcttatgattgtggttttgagcttttcactttga 1345701  T
Q  183 ttactaaattagatctaggtattgttatt 211  Q
    || ||| ||||||||||||| ||||||||    
T  1345702 ttcctagattagatctaggtgttgttatt 1345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13121820 - 13122124
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    ||||||| ||||||||||||||   ||||||||||||| ||| |||||||||||||||||||| ||| || ||||| || |||| | || || |||||||    
T  13121820 gttgaagataatttcttgtaacc--tttgtatctctttgtagaaactcattgatagtggattgaagaaatcaatctctcctccaaactatgttaagttgg 13121917  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    ||  |  ||||||| ||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||    ||||||| |||||| ||| |||| ||||    
T  13121918 acttat-tgggtaaacatttattgttgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcac-ttgatttctagattacatct 13122015  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| |||||||| |||||  ||||||   ||  |||||||||| ||| |||||| || | ||||||||||| | ||||| |||||||| | |||||  |    
T  13122016 aggt-ttgttattgttgttactgcttgatgttattttgatattgattagtacttttctttactccacacatcatagtttt-attggtgtga-ttttgtgt 13122112  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  13122113 ccgaattcacaa 13122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1631849 - 1631741
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||||    
T  1631849 gttgaagctaatatcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtaggtcaagttgg 1631750  T
Q  99 accgaactg 107  Q
    |||||||||    
T  1631749 accgaactg 1631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42288227 - 42288101
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttgga 99  Q
    |||||||||||||| ||||||| ||||||||| ||||| || || |||||||||| |||||||||||||| ||||| || ||| | ||||||||||||||    
T  42288227 gttgaagctaatttattgtaacccatttgtatttctttgtaagagctcattgataatggattggagagatcaatctctccccagattaggtcaagttgga 42288128  T
Q  100 ccgaactgggt-aatcatttcttggtg 125  Q
    ||||||||||| ||| |||||||||||    
T  42288127 ccgaactgggtcaataatttcttggtg 42288101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 30833404 - 30833615
Alignment:
Q  9 taatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaa 104  Q
    |||||||||||||| | ||||||||||||||  | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||| |||    
T  30833404 taatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggactgaa 30833503  T
Q  105 ctgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||| | || |  ||||||| |||||||  |||||  ||||||  ||||||| ||||||||| ||||  |||||||||||| || ||| |||||||||    
T  30833504 ctgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatct 30833602  T
Q  199 aggtattgttatt 211  Q
    |||| ||||||||    
T  30833603 aggtgttgttatt 30833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7451169 - 7451295
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    ||||||||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||| |||||| ||||| | ||| | |||||||||||||||    
T  7451169 gttgaagctaatttcttgtaattcatttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctctacagtaggtcaagttgg 7451268  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    | |||||||||| | ||||| |||||||    
T  7451269 a-cgaactgggtgaacatttattggtgt 7451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 42019987 - 42019821
Alignment:
Q  4 gaagctaatttcttgtaactcatttgtatctctttt----aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaa-gttg 97  Q
    ||||||||||||||||||||| |||||||||||||     |  ||||||||||||||| ||| ||||||| ||||| ||| ||||||||||| |  ||||    
T  42019987 gaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttgagagatcaatctcttccccatagtaggttattgttg 42019888  T
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttt 165  Q
    |||| || ||| ||| || |||||||||| ||||||||||||||||| |||| |||||| ||||||||    
T  42019887 gaccaaattggataaacacttcttggtgtgtttgtttctcttctctctttat-ttttgcctgtggttt 42019821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 272
Target Start/End: Original strand, 32289621 - 32289897
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||||| |||||||||||||  || |||||||||||||||  ||| ||||||| ||||| | ||||| ||||||||||| |||||||||    
T  32289621 ctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtcaagtttggaccga 32289720  T
Q  104 actgggt-aatcatttc-ttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattaga 195  Q
    ||||||| ||  || || |||||||  ||||||  |||||  ||||||  ||||||| ||||||| |||||   |||||||||||| || ||| ||||||    
T  32289721 actgggtgaacaatctctttggtgtccttgttttcctcttccctctccttttatcttgtgcttgt-gttttatgcttttcactttgtttcctagattaga 32289819  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctt 272  Q
    ||||||| |||||||| ||| || |||||||      ||||| || |||||| ||||||||| |||||||||||||||    
T  32289820 tctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactactttcctttgctccacacatctt 32289897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33648222 - 33648351
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    ||||||||||||||| |||||| | ||||||| |||||   | |||||||||||||| ||||||||||||| ||||| | ||||| |||||||||  |||    
T  33648222 gttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattgtt 33648321  T
Q  97 ggaccgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||||||| ||||| |||||||    
T  33648322 ggaccgaactgggtaaacatttattggtgt 33648351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24398108 - 24398219
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctt--ttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    |||||||||||||||||||||| | ||||||||||||  | | ||||||||||||| |||||||||||||| ||||| | | |||||||||||||  |||    
T  24398108 gttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcattgtt 24398207  T
Q  97 ggaccgaactgg 108  Q
    ||||||||||||    
T  24398208 ggaccgaactgg 24398219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 28672024 - 28672151
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttggaccgaactgggtaatcatttcttggtgtatttgtttctctt 139  Q
    ||||||| ||| |||||||||||||||| ||||| || |||| |||||||||  ||||||||||| | |||||  || |||| |||| ||||||||||||    
T  28672024 gaactcactgacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaattaggtaaatatatctttgtgtgtttgtttctctt 28672123  T
Q  140 ctctccttatcttttgcttgtggttttg 167  Q
    ||||| ||||| |||||||||| |||||    
T  28672124 ctctctttatcctttgcttgtgattttg 28672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 17450671 - 17450735
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttctccatagtaggtcaagttggaccgaact 106  Q
    |||||||||||||||||||||||||||| ||||| ||  || |||||||||||||||||||||||    
T  17450671 gaactcattgatagtggattggagagatcaatctctccacagagtaggtcaagttggaccgaact 17450735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 6266749 - 6266854
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||   ||||| | ||||| ||||||||||| |||||||||    
T  6266749 ctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccga 6266847  T
Q  104 actgggt 110  Q
    |||||||    
T  6266848 actgggt 6266854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 41446315 - 41446357
Alignment:
Q  123 gtgtatttgtttctcttctctccttatcttttgcttgtggttt 165  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  41446315 gtgtgtttgtttctcttctctctttatcttttgcttgtggttt 41446357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 3491615 - 3491565
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    |||||||||||||||||||| ||||||||| ||||||  ||||||||||||||    
T  3491615 tgctccacacatctttgtttacattggtgtgagtttt--atccgaattcacaa 3491565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 9296639 - 9296675
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9296639 tgctccacacatctttgttttcattggtgtgagtttt 9296675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 13656146 - 13656037
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcatt-gatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgga 99  Q
    |||||||||||||||||| |  ||||||| |||||  | ||||||||| |||||||||||||||||   ||||| | ||||| ||||||||||| |||||    
T  13656146 aagctaatttcttgtaac-ctcttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 13656048  T
Q  100 ccgaactgggt 110  Q
    |||||||||||    
T  13656047 ccgaactgggt 13656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 21629819 - 21629784
Alignment:
Q  252 ttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||| ||||||||||||||||||||||||||||||    
T  21629819 ttcctttgctccacacatctttgttttcattggtgt 21629784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 36191192 - 36191103
Alignment:
Q  179 ttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacat 269  Q
    |||||| ||| ||||||||||||| |||||||| || || ||||||| | ||| |||||||||||||| |  ||| || ||||||||||||    
T  36191192 ttgattcctagattagatctaggt-ttgttattgttattgttgcttgaggttgatttgatattggttactgattttctttgctccacacat 36191103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 7597029 - 7596960
Alignment:
Q  98 gaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    |||||||||  ||||  |||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||    
T  7597029 gaccgaactaagtaaatatttgttggtgtgtttatttctcttctctctttatcttttgcttttgtttttg 7596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 42261603 - 42261566
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  42261603 gttgaagctaatttcttgtaactcttttgtatatcttt 42261566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 42412117 - 42412162
Alignment:
Q  48 attgatagtggattggagagataaatctttctccatagtaggtcaa 93  Q
    |||||||||||||||||||||| ||||| || ||| ||||||||||    
T  42412117 attgatagtggattggagagatcaatctctccccagagtaggtcaa 42412162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 14291347 - 14291311
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14291347 tgctccacacacctttgttttcattggtgtgagtttt 14291311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 9183148 - 9182872
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| | || ||||||||||    
T  9183148 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattatgtcaagttgg 9183049  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || |  ||||||| |||||   ||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  9183048 accgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttttgcttgtggttttgtacttttcactttgattcctagattag 9182949  T
Q  195 atctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||| |||||||| ||| || |||||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  9182948 atctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacacatc 9182872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 26954403 - 26954093
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||| || || | |||||||||||||||    
T  26954403 gttgaagctaatttcttgtaactcatctgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtcaagttgg 26954304  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||| ||| | || |  ||||||  ||||||||||||||||| |||  |||| ||||||||||||  ||||||||||||||| ||| |||||||||    
T  26954303 accgaactaggtcaacaatctttggtgactttgtttctcttctctctttacatttttcttgtggttttgtgcttttcactttgattcctagattagatct 26954204  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    ||||  ||||||| ||||| || ||| ||||| |||||| |||||||| ||||||| | ||||||||||||| | ||||  |||||||| | |||||| |    
T  26954203 aggtgctgttattgttgttatttcttatgtttactttgaaattggttactactttcttttgctccacacatcatagtttgtattggtgtga-ttttgagt 26954105  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  26954104 ccgaattcacaa 26954093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 310
Target Start/End: Complemental strand, 28137521 - 28137213
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggaccg 102  Q
    |||||||||||||||||| ||||||||| ||||| || |||||||||||||||||||||||||||| ||||| || || | |||||||||||||||||||    
T  28137521 aagctaatttcttgtaacccatttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtcaagttggaccg 28137422  T
Q  103 aactgggtaatcatttcttggtgtatttg--tttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    || || || | ||||||||||| | |||   ||| ||||||| | ||||||||||||||||||| ||  ||||||||||||||| ||| ||||||||||     
T  28137421 aattgtgtgaacatttcttggtatgttttgttttatcttctccctttatcttttgcttgtggttatgtgcttttcactttgattcctatattagatctat 28137322  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatcc 300  Q
    || |||||||| | ||| |||||||||||| ||||||||||||||| ||||||||| |||||||||| || | ||||  |||||||| | ||||||  ||    
T  28137321 gtgttgttattgtcgttattgcttgtgtttactttgatattggttactactttcctttgctccacacgtcatagtttgtattggtgtga-ttttgagacc 28137223  T
Q  301 gaattcacaa 310  Q
    ||||||||||    
T  28137222 gaattcacaa 28137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 33160465 - 33160192
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| ||||| || |||| ||||  ||||||| |||||    
T  33160465 aagctaatttcttgtaactcttttgtatctctttgtaagaactcattgatggtggattggagagatcaatctctcctccagagtatttcaagtttggacc 33160366  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt---atcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
     |||||||| | || |  ||||||| |||||||||||  |||||||||   |||||||| |||||||||||  ||||||||||||||||||| |||||||    
T  33160365 aaactgggtgaacaatctttggtgtgtttgtttctctcttctctcctttttatcttttgtttgtggttttgtgcttttcactttgattactagattagat 33160266  T
Q  197 ctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||| |||||| ||||||| |||||||| ||| |||||| |||||||| || |||||| |||||||||||||    
T  33160265 ctaggtgttgttaatattgttgttgcttgtatttactttgaaattggttactattttcctttgctccacacatc 33160192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 241
Target Start/End: Complemental strand, 33211300 - 33211060
Alignment:
Q  3 tgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttggac 100  Q
    ||||| |||||||||||| ||||||||||||||||| || ||||||||| ||| |||||||||||||| ||||| || || | |||||||||||||||||    
T  33211300 tgaagttaatttcttgtagctcatttgtatctctttgtaagaactcatttataatggattggagagatcaatctctcccccagagtaggtcaagttggac 33211201  T
Q  101 cgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctag 200  Q
    |||||||||| | || |  ||||| | ||||||||||||||||| ||||||||||||||||||||||   |||||||||||||| ||| |||||||||||    
T  33211200 cgaactgggtcaacaatctttggtatgtttgtttctcttctctctttatcttttgcttgtggttttgtgattttcactttgattcctagattagatctag 33211101  T
Q  201 gtattgttattattgtttttgcttgtgtttgctttgatatt 241  Q
    || || ||||| ||||| |||||||||||| |||| |||||    
T  33211100 gtgttattattgttgttattgcttgtgtttactttaatatt 33211060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 120 - 312
Target Start/End: Complemental strand, 3038919 - 3038727
Alignment:
Q  120 ttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttt 219  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |    
T  3038919 ttggtgtgtttgtttcttttctctctttatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttattattgttgt 3038820  T
Q  220 tgcttg-tgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaata 312  Q
    | |||| ||||||||||||||||||||||||||||||| ||||| ||||||| | ||||  |||||| | | |||||| | |||||||||||||    
T  3038819 tacttgttgtttgctttgatattggttattactttcctttgctcgacacatcatagtttgtattggtctga-ttttgagttcgaattcacaata 3038727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 16569115 - 16569347
Alignment:
Q  42 gaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgtttctc--t 138  Q
    |||||||||||||||||||||||||||| ||||| || |||| | ||||||||||||||||||||||||| | || |  ||||||| ||||||||||  |    
T  16569115 gaactcattgatagtggattggagagatcaatctctcctccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtttctctct 16569214  T
Q  139 tctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgat 238  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  || |||| ||||| ||||||| |||  |||||||    
T  16569215 tctctctttatcttttgcttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttgttattgcttgagttcactttgat 16569314  T
Q  239 attggttattactttcc-tctgctccacacatc 270  Q
     ||||||| |||||||| | |||||||||||||    
T  16569315 tttggttactactttccttttgctccacacatc 16569347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 5413507 - 5413219
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| |||||    
T  5413507 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggacc 5413408  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||  ||  || | ||||||| |||||||||||  |||||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||    
T  5413407 gaactggtgaacaatct-ttggtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatc 5413310  T
Q  198 taggtattgttattattgttt-ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||| |||||||| ||| || ||||||||| |  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  5413309 taggtgttgttattgttgattattgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 5413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 84 - 310
Target Start/End: Complemental strand, 14521710 - 14521480
Alignment:
Q  84 agtaggtcaagttggaccgaactgggtaatcattt-cttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttga 182  Q
    |||||||||  |||||||||||| ||| | ||||| |||||||| ||| ||||| ||||| | ||||||| ||||||||||||||| |||||||||||||    
T  14521710 agtaggtcatattggaccgaactaggtcaacattttcttggtgtgtttatttcttttctcactttatcttatgcttgtggttttgagcttttcactttga 14521611  T
Q  183 ttactaaattagatctaggtattgttattattgtttttgcttgtgtttgctttgatattggtta----ttactttcctctgctccacacatctttgtttt 278  Q
    || ||| ||||||||||||| ||||| |||||||| |||||||||||| |||||| ||||||||     |||||| || ||||||||||||| | | |||    
T  14521610 ttcctagattagatctaggtgttgttgttattgttgttgcttgtgtttactttgaaattggttactacgtacttttctttgctccacacatcatag-ttt 14521512  T
Q  279 cattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||||| |||||||| |||||||||||||    
T  14521511 cattggtgtgagttttgagtccgaattcacaa 14521480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 26 - 287
Target Start/End: Complemental strand, 5409161 - 5408894
Alignment:
Q  26 tttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttg 122  Q
    ||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||||||||||  ||  || | |||    
T  5409161 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactggtgaacaatct-ttg 5409063  T
Q  123 gtgtatttgtttctct--tctctcctt--atcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgttt 218  Q
    |||| |||||||||||  |||||||||  |||||||||||||||||| |  |||||| |||||||| ||| ||||||||||||| |||||||| ||| ||    
T  5409062 gtgtgtttgtttctctcttctctccttttatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgatt 5408964  T
Q  219 -ttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
     ||||||||| |  ||||||||||||||| ||||||||| ||||||||||||| | ||||  ||||||||    
T  5408963 attgcttgtgctcactttgatattggttactactttcctttgctccacacatcatagtttgtattggtgt 5408894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 31404788 - 31404516
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| |||||| |||| |||||||    
T  31404788 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggacc 31404689  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  ||||||||||||||||| ||||  |||| | |||||||| ||| ||||||||    
T  31404688 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgcttgtgg-tttgtgctttcctctttgattcctagattagatc 31404590  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||  ||||||| ||| || ||||||||| |  ||||||||||| ||| || |||||| |||||||||||||    
T  31404589 taggtgctgttattgttgattattgcttgtgctcactttgatattgattactattttcctttgctccacacatc 31404516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21588982 - 21589109
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  21588982 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 21589081  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  21589082 accgaactgggtgaacatttcttggtgt 21589109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21593715 - 21593842
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  21593715 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagttgg 21593814  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  21593815 accgaactgggtgaacatttcttggtgt 21593842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 5406313 - 5406027
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||| |||    
T  5406313 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaacc 5406214  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  |||||||||| |||||| ||||  |||||| |||||||| ||| ||||||||    
T  5406213 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgtttgtgg-tttgtgcttttctctttgattcctagattagatc 5406115  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||   || |||||||| || ||||||||| |  |||| |||||||||| |||||| || | ||||||||||| | ||||  ||||||||    
T  5406114 tagg---tgctattattgattattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagtttgtattggtgt 5406027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 5410638 - 5410352
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||| |||    
T  5410638 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgaacc 5410539  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||  |||||||||| |||||| ||||  |||||| |||||||| ||| ||||||||    
T  5410538 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgtttgtgg-tttgtgcttttctctttgattcctagattagatc 5410440  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgt 287  Q
    ||||   || |||||||| || ||||||||| |  |||| |||||||||| |||||| || | ||||||||||| | ||||  ||||||||    
T  5410439 tagg---tgctattattgattattgcttgtgctcactttaatattggttactacttttctttactccacacatcatagtttgtattggtgt 5410352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 16452442 - 16452169
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagtt-ggacc 101  Q
    |||||||||||||||||| | ||  |||||||||  | |||||||||||||||||||||||||| | ||||| || |||| ||||||||||||| |||||    
T  16452442 aagctaatttcttgtaaccctttcatatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 16452343  T
Q  102 gaactgggtaatcatttcttggtgtatttgtttctct--tctctccttatct---tttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    ||||||||| | || |  ||||||| |||||||||||  ||||||||| | |   |||||||||||||| |  ||||||||||||||| ||| |||||||    
T  16452342 gaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatatttttgcttgtggttt-gtgcttttcactttgattcctagattagat 16452244  T
Q  197 ctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||||  ||||||| ||| || |||||||| ||  ||||| ||||||||| ||||||||| | |||||||||||    
T  16452243 ctaggtgatgttattgttgattattgcttgtattcactttgttattggttactactttcctttactccacacatc 16452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 30834649 - 30834375
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt-aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  30834649 aagctaatttcttgtaacccttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 30834550  T
Q  102 gaactgggt-aatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttt-tgaacttttcactttgattactaaattaga 195  Q
    ||||||||| ||| || | ||||||| ||||||  ||||||||||||  |||| ||||||||||||||| ||   ||||||||||||||  || ||||||    
T  30834549 gaactgggtgaataatct-ttggtgtgtttgtttatctcttctctccttttatattttgcttgtggtttgtgtttttttcactttgattcatagattaga 30834451  T
Q  196 tctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||  ||||||| ||| || |||||||  ||  ||||| ||||||||| || |||||| |||||||||||||    
T  30834450 tctaggtgctgttattgttgattattgcttgcattcactttgttattggttactattttcctttgctccacacatc 30834375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5043678 - 5043806
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agttg 97  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||| | |||||||||||||||  ||||    
T  5043678 gttgaagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcctccatagtaggtcattgttg 5043777  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||||||| | |||||||||||||    
T  5043778 gaccgaactgggtgaacatttcttggtgt 5043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2973056 - 2972929
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||| | ||||||||||||| |    
T  2973056 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctcaagagtaggtcaagttcg 2972957  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||| ||| | |||||||||||||    
T  2972956 accgaactaggtgaacatttcttggtgt 2972929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26830240 - 26830113
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||| |    
T  26830240 gttgaagctaatttcttgtaatccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccaaagtaggtcaagtttg 26830141  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    || ||||||||| | |||||||||||||    
T  26830140 actgaactgggtgaacatttcttggtgt 26830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 270
Target Start/End: Complemental strand, 2171644 - 2171368
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  2171644 aagctaatttcttgtaaccc-tttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 2171546  T
Q  102 gaactgggt-aatcatttcttggtgtatttgtt--tctcttctctcc---ttatcttttgcttgtggttt-tg-aacttttcactttgattactaaatta 193  Q
    ||||||||| ||  || ||||||||||||||||  ||||||||||||   ||||||| |||||||| ||| ||    |||||||||||||| ||| ||||    
T  2171545 gaactgggtgaacaatctcttggtgtatttgtttatctcttctctcccttttatcttgtgcttgtgttttatgttttttttcactttgattcctagatta 2171446  T
Q  194 gatctaggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    |||||||||  ||||||| ||| || |||||||      ||||| || |||||| ||||||||| |||||||||||||    
T  2171445 gatctaggtgctgttattgttgattattgcttgcacacactttgttagtggttactactttcctttgctccacacatc 2171368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17758074 - 17758202
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||   ||| | ||||| ||||| |||    
T  17758074 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagttcaagtttg 17758173  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||| ||| | |||||||||||||    
T  17758174 gaccgaactaggtgaacatttcttggtgt 17758202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17763041 - 17763169
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttg 97  Q
    |||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||||| ||| ||||| | ||||| ||||| ||||| |||    
T  17763041 gttgaagctaatttcttgtaactcatttgtatctttttggaagaactcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttg 17763140  T
Q  98 gaccgaactgggtaatcatttcttggtgt 126  Q
    ||||||||| ||| | |||||||||||||    
T  17763141 gaccgaactaggtgaacatttcttggtgt 17763169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 603205 - 603094
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||| || ||||| || || | | |||||||||||||    
T  603205 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcgttgatagtggattggagaaatcaatctctccccaagattaggtcaagttgg 603106  T
Q  99 accgaactgggt 110  Q
    ||||||||||||    
T  603105 accgaactgggt 603094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4045474 - 4045671
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttg-tatctctttt--aggaactcattgatagtggattggagagataaatcttt-ctccatagtaggtcaagtt 96  Q
    ||||||||||||||||||||| ||||||  |||||||||   |  ||||||||||||||||||||||||||| ||| | | | ||| |||||||          
T  4045474 gttgaagctaatttcttgtaa-tcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtaggt------ 4045566  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||| || |||||||||   ||||||| ||||||  || |||||||    
T  4045567 ggaccgaactaggtaagcatttcttggtgtgtttgtttctcttctctctttatcttttactcgtggttttgtttttttcac-ttgattcttagattagat 4045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26800638 - 26800766
Alignment:
Q  1 gttgaagctaatttcttgtaactca-tttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtca-agtt 96  Q
    ||||||||||||||||||||||| | ||||||||||||| || ||||||||| |||||||||||||||||| ||||| | ||||| |||||||||  |||    
T  26800638 gttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgtt 26800736  T
Q  97 ggaccgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | | |||||||||||||    
T  26800737 ggaccgaactggatgaacatttcttggtgt 26800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3808826 - 3808717
Alignment:
Q  1 gttgaagctaatttcttgtaactcattt-gtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-tt 96  Q
    |||||| ||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||||| | ||    
T  3808826 gttgaaactaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcatgatt 3808727  T
Q  97 ggaccgaact 106  Q
    ||||||||||    
T  3808726 ggaccgaact 3808717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 3039019 - 3038945
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct 75  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||| || |||||||||||||||||| |||||    
T  3039019 ttgaagctaatttcttgtaacccatttgtatctctttgtaagaactctttaatagtggattggagagattaatct 3038945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 3072871 - 3072739
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||||||||| ||| |||||||||||  | |||||||||||||||| ||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  3072871 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccg 3072772  T
Q  103 aactgggt-aatcatttcttggtgtatttgttt 134  Q
    |||||||| ||  || ||||||||| |||||||    
T  3072771 aactgggtgaacaatctcttggtgtctttgttt 3072739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 412158 - 412265
Alignment:
Q  8 ctaatttcttgtaactcattt-gtatctctttt--aggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    ||||||||||||||||| ||| |||||||||||  | |||||||||||||||||||| ||||| | ||||| | ||||| ||||||||||| ||||||||    
T  412158 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccg 412257  T
Q  103 aactgggt 110  Q
    ||||||||    
T  412258 aactgggt 412265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 22424940 - 22424815
Alignment:
Q  5 aagctaatttcttgtaactcattt--gtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaa-gttgga 99  Q
    |||||||||||||||||| |||||  |||||||||| || ||||||||| |||||||||||||||||| ||||| || | || |||||||||  ||||||    
T  22424940 aagctaatttcttgtaacccatttttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctccttcagagtaggtcattgttgga 22424842  T
Q  100 ccgaactgggtaatcatttcttggtgt 126  Q
    ||| ||||||| | |||||||||||||    
T  22424841 ccgtactgggtgaacatttcttggtgt 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 12221126 - 12221053
Alignment:
Q  94 gttggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttg 167  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||| | || ||||||||||| ||| ||||||    
T  12221126 gttggaccgaactgggtaaacatttcttggtgtgtttatttctcttatatctttatcttttgcgtgtagttttg 12221053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 6097526 - 6097456
Alignment:
Q  42 gaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 110  Q
    |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  6097526 gaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 6097456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 5675005 - 5675041
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  5675005 tgctccacacatctttgttttcattggtgtgagtttt 5675041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 26310472 - 26310412
Alignment:
Q  2 ttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattg 62  Q
    ||||||||||||||||||||||  |||||||||||||||   ||| ||| |||||||||||    
T  26310472 ttgaagctaatttcttgtaacttctttgtatctcttttaaagacttattcatagtggattg 26310412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 27647915 - 27648023
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagag-ataaatctttctccatagtaggtcaag-ttggac 100  Q
    |||||||||||||||||| | |||||||| |||||  | |||||| ||||||||||||||||||| | |||   | ||||| ||||| ||||| ||||||    
T  27647915 aagctaatttcttgtaac-cttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtagatcaagtttggac 27648013  T
Q  101 cgaactgggt 110  Q
    ||||||||||    
T  27648014 cgaactgggt 27648023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 30126032 - 30126061
Alignment:
Q  258 tgctccacacatctttgttttcattggtgt 287  Q
    ||||||||||||||||||||||||||||||    
T  30126032 tgctccacacatctttgttttcattggtgt 30126061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 602957 - 602905
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    ||||||||||||| | ||||  |||||||| |||||||| |||||||||||||    
T  602957 tgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaa 602905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 149214 - 148914
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    ||||||||||||||||||| || ||||| ||||||||| || |||||||||||||||||||||||||||| ||||| || || | ||||||| |||||||    
T  149214 gttgaagctaatttcttgttacccatttatatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggttaagttgg 149115  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatct 198  Q
    |||||||||||| | || |  ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||||| |    
T  149114 accgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgcttgtggttttgtacttttca-tttgattcctagattagattt 149016  T
Q  199 aggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaat 298  Q
    |||| ||||||         |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||  | ||||  |||| ||| | |||||| |    
T  149015 aggtgttgtta---------ttgcttgtgtttactttgatgttggttactactttcctttgctccacacattatagtttgtattgatgtga-ttttgagt 148926  T
Q  299 ccgaattcacaa 310  Q
    ||||||||||||    
T  148925 ccgaattcacaa 148914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 20532 - 20218
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||| |||||| |||||||||||||| ||||| || || | | |||||||||||||    
T  20532 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactctttgatattggattggagagatcaatctctcccccagattaggtcaagttgg 20433  T
Q  99 accgaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattag 194  Q
    |||||||||||| | || || ||||||| ||||||  ||||||||||||  ||||||||||||||||||||||   |||||||||||||| ||| |||||    
T  20432 accgaactgggtcaacaatttttggtgtgtttgttcctctcttctctccctttatcttttgcttgtggttttgtgtttttcactttgattcctagattag 20333  T
Q  195 atctaggtattgttattatt-gtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttt 293  Q
    ||||||||  ||||||| ||  || |||||||||||  |||||| |||||||| ||| ||||| ||||||||||||| | ||||  |||||| | ||  |    
T  20332 atctaggtgctgttattgttaattattgcttgtgttcactttgacattggttactaccttcctttgctccacacatcatagtttgtattggtatgag--t 20235  T
Q  294 tgaatccgaattcacaa 310  Q
    ||| |||||||||||||    
T  20234 tgagtccgaattcacaa 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 270
Target Start/End: Original strand, 114657 - 114930
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| ||||||| ||| || ||||    
T  114657 aagctaatttcttgtaacgcttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagacc 114756  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||| | | || |  |||||||  |||||  ||||||||||||  ||||||||| ||||| ||||||  ||||||||||||||| ||| |||||||     
T  114757 gaactggatgaacaatctttggtgtgcttgtttctctcttctctccttttatctttttcttgttgttttgtgcttttcactttgattcctagattagata 114856  T
Q  198 taggtattgttattattg-tttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatc 270  Q
    ||||| |||||||| ||| || ||| |||||||  ||||||||||||||||||||||||| |||||||||||||    
T  114857 taggtgttgttattgttgattattgattgtgttcactttgatattggttattactttcctttgctccacacatc 114930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 27560 - 27252
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctctttt--aggaactcattgatagtggattggagagataaatctttctcc-atagtaggtcaa-gtt 96  Q
    ||||||||||||||||||||||||||||||||||||||   |  |||| |||||||||||||||||||||| ||||| || || |||||||||||  |||    
T  27560 gttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggtcattgtt 27461  T
Q  97 ggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    |||||||| | ||||| ||||| ||| ||| ||| ||||||||||||| ||| ||||||||||||||||||   ||||||| |||||| ||| |||   |    
T  27460 ggaccgaattaggtaaacatttattgatgtgtttatttctcttctctctttaccttttgcttgtggttttgtgtttttcac-ttgattcctagatttctt 27362  T
Q  197 ctaggtattgttattattgtttttgcttgtgtttgctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttga 296  Q
    ||| || ||||||||||| ||  |||||| | || |||| |||||||||| ||| ||||| | |||||||| |||  ||||  |||| ||| || |||||    
T  27361 ctaagt-ttgttattatttttgctgcttgaggttactttcatattggttactac-ttccttttctccacacttctaagttt--attgatgtgagatttga 27266  T
Q  297 atccgaattcacaa 310  Q
     |||||||||||||    
T  27265 gtccgaattcacaa 27252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 434588 - 434801
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  434588 aagctaatttcttgtaacccttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 434687  T
Q  102 gaactgggtaatcatttcttggtgtatttgtt--tctcttctctcc---ttatcttttgcttgtggttttgaacttttcactttgattactaaattagat 196  Q
    ||||||||| | || |  ||||||| ||||||  ||||||||||||   ||||||| ||||||| ||||||  ||||||||||||||| ||| |||||||    
T  434688 gaactgggtgaacaatatttggtgtgtttgtttctctcttctctcccttttatcttgtgcttgt-gttttgtgcttttcactttgattcctagattagat 434786  T
Q  197 ctaggtattgttatt 211  Q
    ||||||  |||||||    
T  434787 ctaggtgctgttatt 434801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 490438 - 490401
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  490438 gttgaagctaatttcttgtaactcttttgtatatcttt 490401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 11612 - 11777
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggacc 101  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||    
T  11612 aagctaatttcttgtaactcatttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggacc 11711  T
Q  102 gaactgggt-aatcatttcttggtgtatttgtt--tctcttctctcc---ttatcttttgcttgtg 161  Q
    ||||||||| ||  || ||||||||||||||||  ||||||||||||   ||||||| ||||||||    
T  11712 gaactgggtgaacaatctcttggtgtatttgtttatctcttctctcccttttatcttgtgcttgtg 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7378 - 7505
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaagttgg 98  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |||| ||||| | ||| | ||||||| |||||||    
T  7378 gttgaagctaatttcttgtaacccatttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcctctagagtaggttaagttgg 7477  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    |||||||||||| | |||||||||||||    
T  7478 accgaactgggtgaacatttcttggtgt 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 310
Target Start/End: Complemental strand, 1494 - 1303
Alignment:
Q  120 ttggtgtatttgtttctcttctctccttatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttt 219  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||    |||||||||| ||| ||| |||||||||||||  ||||||  ||||| |    
T  1494 ttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatcgttgttat 1395  T
Q  220 tgcttgtgttt-gctttgatattggttattactttcctctgctccacacatctttgttttcattggtgtaagttttgaatccgaattcacaa 310  Q
    | |||||||||  |||| |||||| ||| ||||||||| ||||||||||||| | | ||  |||||||| |||||||  | |||||||||||    
T  1394 tacttgtgtttaactttaatattgattactactttcctttgctccacacatcatagattgtattggtgtgagttttgtgttcgaattcacaa 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 18120 - 17993
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttgg 98  Q
    ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||| | |||||  |||||||||| ||||    
T  18120 gttgaagctaatttcttgtaactcatttgtatctctttgtaaaactcattgatagtggattggagagatcaatctctcctccagggtaggtcaagtttgg 18021  T
Q  99 accgaactgggtaatcatttcttggtgt 126  Q
    | |||||||||| | |||||||||||||    
T  18020 atcgaactgggtgaacatttcttggtgt 17993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 971 - 1183
Alignment:
Q  5 aagctaatttcttgtaactcatttgtatctcttttaggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccg 102  Q
    |||||||||||||||||| | ||||||||||||| |  ||||||||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||    
T  971 aagctaatttcttgtaacccttttgtatctctttgaacaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 1070  T
Q  103 aactgggtaatcatttcttggtgt-atttgtt--tctcttctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    |||||||| | || |  |||||||  ||||||  ||||||||||||  ||||  ||||||||||| ||||  ||||||||||||||  ||| ||||||||    
T  1071 aactgggtgaacaatctttggtgtgttttgtttctctcttctctccttttatactttgcttgtgg-tttgtgcttttcactttgatacctagattagatc 1169  T
Q  198 taggtattgttatt 211  Q
    |||||  |||||||    
T  1170 taggtggtgttatt 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 10546 - 10667
Alignment:
Q  7 gctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattggagagataaatctttc-tccatagtaggtcaagttggaccgaa 104  Q
    |||||||| |||||||   ||||||||||||| || |||||| |||||||||||||| |||||| ||||| || |||| |||||||||||||||||||||    
T  10546 gctaatttattgtaaccattttgtatctctttgtaagaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtcaagttggaccgaa 10645  T
Q  105 ctgggtaatcatttcttggtgt 126  Q
    |||||||| |||||||||||||    
T  10646 ctgggtaaacatttcttggtgt 10667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 8846 - 8634
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||||||||  || |||||| ||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  8846 ctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 8747  T
Q  104 actgggtaatcatttcttggtgtatttgttt--ctcttctctc----cttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||| | || |  ||||||| |||||||  |||||| |||     ||||||| ||||||||| ||||  |||||||||||| || ||| ||||||||    
T  8746 actgggtgaacaatctttggtgtctttgttttcctcttccctcttcttttatcttgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatc 8648  T
Q  198 taggtattgttatt 211  Q
    ||||| ||||||||    
T  8647 taggtgttgttatt 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 11272 - 11060
Alignment:
Q  8 ctaatttcttgtaactcatttgtatctcttt--taggaactcattgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccga 103  Q
    ||||||||||||||| | |||||||||||||  || |||||| ||||||||||||||||||| | ||||| | ||||| ||||||||||| |||||||||    
T  11272 ctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 11173  T
Q  104 actgggtaatcatttcttggtgtatttgttt--ctctt--ctctcc--ttatcttttgcttgtggttttgaacttttcactttgattactaaattagatc 197  Q
    ||||||| | || |  ||||||| |||||||  |||||  ||||||  ||||||| ||||||||| ||||   ||||||||||| || ||| ||||||||    
T  11172 actgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatcttgtgcttgtgg-tttgtgtttttcactttgtttcctagattagatc 11074  T
Q  198 taggtattgttatt 211  Q
    ||||| ||||||||    
T  11073 taggtgttgttatt 11060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 475 - 511
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||||||||||||| ||||||    
T  475 tgctccacacatctttgttttcattggtgtgagtttt 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 3794 - 3731
Alignment:
Q  49 ttgatagtggattggagagataaatct-ttctccatagtaggtcaag-ttggaccgaactgggt 110  Q
    ||||||||||||||||||| | ||||| | ||||| ||||||||||| ||||||||||||||||    
T  3794 ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggt 3731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 80400 - 80338
Alignment:
Q  1 gttgaagctaatttcttgtaactcatttgtatctcttt-taggaactcattgatagtggattg 62  Q
    |||||||||||||||||| ||| ||||||||||| ||| || |||||||| ||||||| ||||    
T  80400 gttgaagctaatttcttgcaacccatttgtatctttttgtaagaactcatagatagtgaattg 80338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 24279 - 24315
Alignment:
Q  258 tgctccacacatctttgttttcattggtgtaagtttt 294  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  24279 tgctccacacatctttgtttacattggtgtgagtttt 24315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University