View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10163_low_10 (Length: 349)

Name: NF10163_low_10
Description: NF10163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10163_low_10
NF10163_low_10
[»] chr7 (56 HSPs)
chr7 (1-305)||(21873757-21874061)
chr7 (1-305)||(7791398-7791702)
chr7 (1-305)||(40704719-40705023)
chr7 (1-304)||(32661582-32661885)
chr7 (1-305)||(8214925-8215229)
chr7 (5-309)||(43246235-43246539)
chr7 (1-304)||(47065149-47065451)
chr7 (1-305)||(42094762-42095067)
chr7 (5-305)||(32541393-32541692)
chr7 (5-305)||(46924426-46924726)
chr7 (1-304)||(19699540-19699842)
chr7 (5-242)||(46321383-46321620)
chr7 (5-208)||(40994209-40994412)
chr7 (1-273)||(40995706-40995978)
chr7 (5-235)||(7900989-7901219)
chr7 (5-304)||(35924653-35924952)
chr7 (5-304)||(27325388-27325686)
chr7 (1-305)||(21278264-21278569)
chr7 (5-242)||(26015161-26015398)
chr7 (5-273)||(34592232-34592500)
chr7 (1-305)||(25877322-25877628)
chr7 (1-302)||(38282930-38283229)
chr7 (1-304)||(47778767-47779071)
chr7 (62-305)||(39073652-39073895)
chr7 (67-208)||(38875455-38875596)
chr7 (108-242)||(10533267-10533401)
chr7 (39-107)||(47011037-47011105)
chr7 (39-107)||(48613551-48613619)
chr7 (39-147)||(24981570-24981678)
chr7 (40-107)||(43777011-43777078)
chr7 (55-147)||(19020607-19020698)
chr7 (39-272)||(48642429-48642656)
chr7 (39-107)||(242227-242295)
chr7 (39-107)||(12846835-12846903)
chr7 (39-107)||(20493416-20493484)
chr7 (39-107)||(29042609-29042677)
chr7 (39-107)||(30173010-30173078)
chr7 (39-107)||(42435809-42435877)
chr7 (39-107)||(43501595-43501663)
chr7 (47-107)||(46102426-46102486)
chr7 (40-107)||(25226161-25226228)
chr7 (39-123)||(41469571-41469656)
chr7 (47-107)||(10594735-10594795)
chr7 (39-107)||(40863100-40863168)
chr7 (39-107)||(45869667-45869735)
chr7 (39-107)||(47541016-47541084)
chr7 (39-147)||(40304933-40305041)
chr7 (55-102)||(45236539-45236586)
chr7 (39-107)||(7883273-7883341)
chr7 (39-107)||(36688111-36688179)
chr7 (39-107)||(39597126-39597194)
chr7 (39-107)||(48873830-48873897)
chr7 (39-98)||(12429539-12429598)
chr7 (305-337)||(328345-328377)
chr7 (47-107)||(25066137-25066197)
chr7 (56-123)||(34012778-34012846)
[»] chr6 (26 HSPs)
chr6 (1-305)||(18894263-18894567)
chr6 (1-305)||(7141732-7142036)
chr6 (1-305)||(6625852-6626156)
chr6 (5-305)||(6167248-6167547)
chr6 (5-304)||(13889307-13889606)
chr6 (47-305)||(25332149-25332407)
chr6 (1-208)||(29629858-29630066)
chr6 (1-304)||(3095064-3095368)
chr6 (5-242)||(29121690-29121915)
chr6 (39-123)||(7082120-7082205)
chr6 (39-107)||(8810168-8810236)
chr6 (39-107)||(17314887-17314955)
chr6 (39-147)||(18024755-18024863)
chr6 (164-304)||(25331634-25331773)
chr6 (39-107)||(8525871-8525939)
chr6 (39-123)||(6675265-6675350)
chr6 (39-147)||(29622727-29622835)
chr6 (39-107)||(6926468-6926536)
chr6 (48-123)||(26947226-26947302)
chr6 (39-107)||(31090638-31090706)
chr6 (53-123)||(14253169-14253240)
chr6 (66-107)||(32173097-32173138)
chr6 (39-107)||(13444625-13444693)
chr6 (47-107)||(29880818-29880878)
chr6 (40-107)||(11368226-11368293)
chr6 (39-107)||(5715505-5715573)
[»] chr1 (56 HSPs)
chr1 (5-304)||(2481923-2482222)
chr1 (1-305)||(11172616-11172919)
chr1 (5-305)||(24317702-24318001)
chr1 (1-273)||(2137663-2137935)
chr1 (3-305)||(39982891-39983192)
chr1 (5-304)||(49823722-49824021)
chr1 (1-235)||(51676555-51676788)
chr1 (5-304)||(39568649-39568947)
chr1 (5-304)||(52043667-52043965)
chr1 (5-304)||(34270034-34270334)
chr1 (5-304)||(44722427-44722727)
chr1 (1-300)||(40535923-40536222)
chr1 (1-208)||(18909693-18909900)
chr1 (1-301)||(20582114-20582414)
chr1 (1-305)||(40400543-40400848)
chr1 (1-305)||(52025169-52025472)
chr1 (1-304)||(14246512-14246815)
chr1 (5-304)||(42948713-42949012)
chr1 (35-305)||(26163792-26164061)
chr1 (1-305)||(13234591-13234895)
chr1 (59-304)||(34276269-34276514)
chr1 (35-304)||(50728410-50728677)
chr1 (60-305)||(28852099-28852344)
chr1 (1-149)||(51290800-51290947)
chr1 (89-305)||(6653716-6653931)
chr1 (136-304)||(15941497-15941665)
chr1 (133-305)||(33009979-33010150)
chr1 (39-123)||(1441975-1442060)
chr1 (39-147)||(12602568-12602676)
chr1 (39-107)||(23443645-23443713)
chr1 (39-107)||(26308234-26308302)
chr1 (39-107)||(32087144-32087212)
chr1 (39-107)||(35274494-35274562)
chr1 (39-107)||(41713498-41713566)
chr1 (39-107)||(48933946-48934014)
chr1 (41-107)||(1701496-1701562)
chr1 (39-112)||(14289638-14289711)
chr1 (51-123)||(45926088-45926161)
chr1 (39-107)||(5673529-5673597)
chr1 (39-107)||(6015962-6016030)
chr1 (47-107)||(8113221-8113281)
chr1 (47-107)||(13073778-13073838)
chr1 (39-107)||(17475043-17475111)
chr1 (39-107)||(17702657-17702725)
chr1 (39-103)||(29921239-29921303)
chr1 (39-107)||(32117421-32117489)
chr1 (39-107)||(46291070-46291138)
chr1 (39-107)||(51001380-51001448)
chr1 (39-147)||(40499200-40499308)
chr1 (41-107)||(19513565-19513631)
chr1 (51-146)||(24663647-24663742)
chr1 (66-107)||(3486367-3486408)
chr1 (39-107)||(19247248-19247316)
chr1 (47-107)||(32562091-32562151)
chr1 (47-107)||(45942104-45942164)
chr1 (71-107)||(7009660-7009696)
[»] chr5 (43 HSPs)
chr5 (1-272)||(25085521-25085792)
chr5 (2-304)||(6468966-6469267)
chr5 (1-242)||(25143493-25143734)
chr5 (1-304)||(33281371-33281674)
chr5 (1-304)||(31510707-31511009)
chr5 (1-304)||(43292946-43293249)
chr5 (5-304)||(37866398-37866697)
chr5 (1-304)||(38759657-38759960)
chr5 (5-305)||(4155407-4155706)
chr5 (5-300)||(9066206-9066500)
chr5 (5-207)||(13145250-13145452)
chr5 (1-242)||(29920961-29921202)
chr5 (1-304)||(19616875-19617169)
chr5 (5-242)||(19034040-19034283)
chr5 (1-305)||(43517554-43517859)
chr5 (5-272)||(24559616-24559874)
chr5 (5-208)||(24600648-24600843)
chr5 (39-107)||(15272022-15272090)
chr5 (39-147)||(18979166-18979274)
chr5 (47-147)||(37106725-37106825)
chr5 (66-107)||(27309645-27309686)
chr5 (39-107)||(4621885-4621953)
chr5 (39-107)||(7339512-7339580)
chr5 (39-107)||(8048151-8048219)
chr5 (39-107)||(10665480-10665548)
chr5 (39-107)||(18865268-18865336)
chr5 (39-107)||(31485363-31485431)
chr5 (39-107)||(37274116-37274184)
chr5 (39-107)||(40739861-40739929)
chr5 (39-107)||(41881197-41881265)
chr5 (39-107)||(42436649-42436717)
chr5 (39-107)||(43547909-43547977)
chr5 (39-107)||(6245952-6246020)
chr5 (39-107)||(8233271-8233339)
chr5 (39-107)||(10552887-10552955)
chr5 (39-98)||(12188669-12188728)
chr5 (47-109)||(35318794-35318856)
chr5 (47-107)||(13210364-13210424)
chr5 (47-107)||(18522711-18522771)
chr5 (47-107)||(38768999-38769059)
chr5 (40-107)||(24478122-24478189)
chr5 (39-84)||(36294643-36294688)
chr5 (53-147)||(37341548-37341642)
[»] chr4 (58 HSPs)
chr4 (1-305)||(52912425-52912729)
chr4 (5-304)||(20434635-20434934)
chr4 (1-305)||(20738266-20738569)
chr4 (1-305)||(42723406-42723710)
chr4 (5-304)||(42349223-42349522)
chr4 (1-304)||(56017714-56018017)
chr4 (1-305)||(23894460-23894764)
chr4 (5-312)||(55214861-55215168)
chr4 (5-305)||(55220390-55220690)
chr4 (5-305)||(46563749-46564048)
chr4 (5-305)||(56363227-56363526)
chr4 (5-304)||(55182793-55183092)
chr4 (1-304)||(39539734-39540036)
chr4 (1-304)||(28405712-28406017)
chr4 (1-305)||(19873352-19873651)
chr4 (1-304)||(37233438-37233743)
chr4 (1-304)||(38291157-38291465)
chr4 (1-235)||(53874379-53874614)
chr4 (1-301)||(10541383-10541685)
chr4 (5-242)||(52839050-52839287)
chr4 (5-172)||(25858185-25858352)
chr4 (1-145)||(31710364-31710508)
chr4 (67-305)||(614412-614651)
chr4 (94-304)||(43829521-43829730)
chr4 (85-305)||(1356317-1356538)
chr4 (170-305)||(5098717-5098852)
chr4 (39-107)||(15506410-15506478)
chr4 (39-107)||(22847675-22847743)
chr4 (39-107)||(37829595-37829663)
chr4 (40-107)||(48707-48774)
chr4 (39-147)||(48991107-48991215)
chr4 (39-120)||(3025660-3025742)
chr4 (39-107)||(1523523-1523591)
chr4 (39-107)||(20292683-20292751)
chr4 (39-107)||(30215165-30215233)
chr4 (39-107)||(36852395-36852463)
chr4 (39-107)||(40430968-40431036)
chr4 (39-107)||(43457663-43457731)
chr4 (39-147)||(41201676-41201784)
chr4 (66-107)||(24897537-24897578)
chr4 (51-107)||(1536807-1536863)
chr4 (47-107)||(10480685-10480745)
chr4 (39-107)||(11691554-11691622)
chr4 (39-107)||(13961742-13961810)
chr4 (39-107)||(32933350-32933418)
chr4 (39-107)||(34160055-34160123)
chr4 (39-107)||(35338999-35339067)
chr4 (39-107)||(47466817-47466885)
chr4 (39-107)||(50469725-50469793)
chr4 (39-107)||(51323215-51323283)
chr4 (217-304)||(31710531-31710618)
chr4 (39-107)||(7318858-7318926)
chr4 (39-107)||(7818291-7818359)
chr4 (39-99)||(3027170-3027230)
chr4 (71-107)||(8713852-8713888)
chr4 (74-147)||(37682626-37682699)
chr4 (47-107)||(43621014-43621073)
chr4 (47-107)||(47429097-47429157)
[»] chr2 (38 HSPs)
chr2 (5-305)||(37094586-37094886)
chr2 (5-312)||(21658443-21658749)
chr2 (5-305)||(25852649-25852949)
chr2 (5-305)||(42343484-42343782)
chr2 (5-305)||(2389931-2390230)
chr2 (1-304)||(3178759-3179062)
chr2 (2-273)||(1520738-1521009)
chr2 (5-305)||(39697075-39697375)
chr2 (5-304)||(13195451-13195750)
chr2 (5-242)||(43577455-43577692)
chr2 (1-208)||(1482385-1482592)
chr2 (5-242)||(40811048-40811285)
chr2 (5-305)||(44143932-44144233)
chr2 (5-305)||(34202827-34203126)
chr2 (58-305)||(35896331-35896578)
chr2 (3-194)||(27980312-27980503)
chr2 (1-304)||(10639256-10639558)
chr2 (5-194)||(28066842-28067031)
chr2 (74-304)||(927590-927819)
chr2 (102-305)||(32550874-32551077)
chr2 (39-107)||(4330898-4330966)
chr2 (39-107)||(26171761-26171829)
chr2 (5-57)||(927539-927591)
chr2 (39-107)||(4072758-4072826)
chr2 (39-107)||(8034129-8034197)
chr2 (39-107)||(10522271-10522339)
chr2 (39-107)||(38628433-38628501)
chr2 (39-107)||(44456210-44456278)
chr2 (39-147)||(7721862-7721970)
chr2 (39-120)||(16312975-16313057)
chr2 (39-146)||(31639861-31639968)
chr2 (69-147)||(40658625-40658703)
chr2 (34-107)||(31569055-31569127)
chr2 (47-107)||(13479834-13479894)
chr2 (71-107)||(45443028-45443064)
chr2 (46-123)||(43653066-43653144)
chr2 (51-123)||(35006299-35006372)
chr2 (74-107)||(44799334-44799367)
[»] chr3 (51 HSPs)
chr3 (1-304)||(33967438-33967741)
chr3 (5-305)||(10840658-10840957)
chr3 (5-304)||(22781074-22781373)
chr3 (1-304)||(32236819-32237122)
chr3 (5-305)||(33711948-33712247)
chr3 (5-304)||(38871648-38871947)
chr3 (2-235)||(20834845-20835078)
chr3 (5-305)||(41070407-41070707)
chr3 (1-304)||(37970938-37971242)
chr3 (5-208)||(4515366-4515569)
chr3 (1-272)||(24395718-24395989)
chr3 (5-304)||(36430839-36431138)
chr3 (5-304)||(4044042-4044340)
chr3 (1-304)||(20656519-20656822)
chr3 (1-304)||(7149232-7149535)
chr3 (1-304)||(40585389-40585692)
chr3 (1-242)||(10999078-10999320)
chr3 (5-304)||(53974805-53975092)
chr3 (1-305)||(20048827-20049132)
chr3 (1-301)||(26090874-26091165)
chr3 (18-301)||(672609-672883)
chr3 (5-208)||(6267664-6267857)
chr3 (63-273)||(25711509-25711719)
chr3 (1-149)||(85171-85319)
chr3 (1-149)||(7678789-7678937)
chr3 (39-107)||(8947254-8947322)
chr3 (39-111)||(2612613-2612685)
chr3 (39-107)||(35155072-35155140)
chr3 (39-107)||(35233029-35233097)
chr3 (39-107)||(48585350-48585418)
chr3 (49-147)||(24200184-24200282)
chr3 (39-100)||(54556815-54556876)
chr3 (39-107)||(14279576-14279644)
chr3 (39-107)||(23483155-23483223)
chr3 (39-107)||(28411972-28412040)
chr3 (39-107)||(36231946-36232014)
chr3 (39-107)||(44353683-44353751)
chr3 (41-107)||(19942306-19942372)
chr3 (47-120)||(52343507-52343581)
chr3 (39-123)||(31608217-31608302)
chr3 (39-107)||(49779159-49779227)
chr3 (39-106)||(39626282-39626349)
chr3 (41-107)||(30419409-30419475)
chr3 (41-107)||(47097678-47097744)
chr3 (66-107)||(33393141-33393182)
chr3 (39-107)||(4595842-4595910)
chr3 (47-107)||(36840012-36840072)
chr3 (71-147)||(41589437-41589513)
chr3 (59-107)||(7680517-7680565)
chr3 (51-107)||(38144536-38144592)
chr3 (71-107)||(52813686-52813722)
[»] chr8 (58 HSPs)
chr8 (5-305)||(24821984-24822284)
chr8 (1-305)||(17602166-17602471)
chr8 (5-273)||(39365806-39366074)
chr8 (1-305)||(15840312-15840617)
chr8 (1-305)||(37578742-37579047)
chr8 (1-305)||(26290029-26290333)
chr8 (1-305)||(26303286-26303590)
chr8 (1-305)||(26315280-26315584)
chr8 (5-304)||(43663602-43663901)
chr8 (5-305)||(3032194-3032494)
chr8 (5-235)||(8376743-8376973)
chr8 (1-303)||(5599145-5599447)
chr8 (1-236)||(34564383-34564618)
chr8 (5-242)||(35605864-35606100)
chr8 (1-208)||(26121958-26122166)
chr8 (5-208)||(42512707-42512910)
chr8 (1-273)||(3136525-3136798)
chr8 (1-208)||(5988669-5988877)
chr8 (1-149)||(28884814-28884962)
chr8 (1-149)||(28910495-28910642)
chr8 (89-209)||(16633891-16634011)
chr8 (102-304)||(34918057-34918259)
chr8 (112-305)||(11588731-11588924)
chr8 (1-98)||(23356715-23356811)
chr8 (128-303)||(5635955-5636130)
chr8 (143-242)||(23356615-23356714)
chr8 (164-304)||(26294410-26294550)
chr8 (164-304)||(26307667-26307807)
chr8 (158-304)||(12713389-12713535)
chr8 (39-147)||(44696228-44696336)
chr8 (35-147)||(7969366-7969477)
chr8 (35-104)||(40184587-40184656)
chr8 (39-147)||(4230055-4230163)
chr8 (39-147)||(38235102-38235210)
chr8 (39-147)||(38946464-38946572)
chr8 (41-107)||(35979455-35979521)
chr8 (39-107)||(4006433-4006501)
chr8 (39-107)||(11266794-11266862)
chr8 (39-107)||(12723096-12723164)
chr8 (39-107)||(31793101-31793169)
chr8 (39-107)||(38459402-38459470)
chr8 (39-107)||(41941427-41941495)
chr8 (39-107)||(42687245-42687313)
chr8 (39-147)||(44026258-44026366)
chr8 (41-123)||(44953653-44953736)
chr8 (39-147)||(7988098-7988205)
chr8 (66-107)||(5346943-5346984)
chr8 (41-98)||(32911010-32911067)
chr8 (39-107)||(6248-6316)
chr8 (39-107)||(1848427-1848495)
chr8 (47-120)||(28152060-28152134)
chr8 (51-123)||(26991930-26992003)
chr8 (39-107)||(44704097-44704165)
chr8 (47-147)||(33771962-33772062)
chr8 (39-96)||(2827665-2827720)
chr8 (41-107)||(38167874-38167940)
chr8 (66-107)||(39713278-39713319)
chr8 (47-107)||(35329134-35329194)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-304)||(41046-41349)
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-305)||(1366-1670)
[»] scaffold0391 (1 HSPs)
scaffold0391 (5-208)||(4535-4738)
[»] scaffold0368 (1 HSPs)
scaffold0368 (5-304)||(14386-14685)
[»] scaffold0007 (2 HSPs)
scaffold0007 (5-208)||(156453-156647)
scaffold0007 (39-107)||(200501-200569)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-149)||(37491-37639)
[»] scaffold0570 (1 HSPs)
scaffold0570 (39-123)||(3874-3959)
[»] scaffold0847 (1 HSPs)
scaffold0847 (39-107)||(129-197)
[»] scaffold0003 (1 HSPs)
scaffold0003 (39-147)||(365208-365316)
[»] scaffold0578 (1 HSPs)
scaffold0578 (41-147)||(9308-9413)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 21874061 - 21873757
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21874061 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 21873962  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  21873961 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcaccgacaatgaataaaattag 21873862  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  21873861 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaagttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 21873762  T
Q  301 actct 305  Q
     ||||    
T  21873761 tctct 21873757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 7791398 - 7791702
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791398 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 7791497  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  7791498 ttttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 7791597  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  7791598 ggttttaagaaaatttatataaaagggcaattttgatattataaaaaacttttaagaaaatttgggtgtaaccagaaaatcatggggtgtaaatagaaaa 7791697  T
Q  301 actct 305  Q
    |||||    
T  7791698 actct 7791702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 40705023 - 40704719
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40705023 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 40704924  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttat-ggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||    
T  40704923 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgggggtgaaagagggtgaaactcactgacaatgaataaaatta 40704824  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    |||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||    
T  40704823 gggttttaagaaaatttatataaaagggcaattttggtattat-aattttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 40704725  T
Q  300 aactct 305  Q
    ||||||    
T  40704724 aactct 40704719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 32661885 - 32661582
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32661885 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 32661786  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| ||||||||    
T  32661785 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaacaaaattag 32661686  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    | ||||||        ||||| |||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  32661685 gcttttaagaaaatttatatagaagggcaattttggtattataaattttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 32661586  T
Q  301 actc 304  Q
    ||||    
T  32661585 actc 32661582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 8215229 - 8214925
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8215229 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcactttcttatatccaattgagtatggatgaaaaatattttgattcact 8215130  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||     
T  8215129 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgtataaaattaa 8215030  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||||||||||||||||||||        |||| |||||||||||||||    
T  8215029 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaactagaaaaacatggggtgtaaatagaaaa 8214930  T
Q  301 actct 305  Q
    |||||    
T  8214929 actct 8214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 43246539 - 43246235
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246539 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 43246440  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  43246439 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 43246340  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||| ||||||||  |||||        ||||||||||||| ||||| |||       |||| |||||||||||||||||||    
T  43246339 ttaagaaaatttatataaaaggacaattttgatattataaaatttttttaagaaaatttaggtgtgaccagaaaaacatggggtgtaaatagaaaaactc 43246240  T
Q  305 tcatt 309  Q
    |||||    
T  43246239 tcatt 43246235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 47065451 - 47065149
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47065451 tcagtgcagttgaagaaaaaaa-ttgaaactagcaaatagaagaagaaattcactcacttatatccaattgagtatggatgaaaaatattttgattcact 47065353  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  47065352 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattag 47065253  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        || ||||||||||||||||||||       |||| |||||||||||||||    
T  47065252 ggttttaagaaaatttatataaaagggcaattttggtattataattttttttaaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 47065153  T
Q  301 actc 304  Q
    ||||    
T  47065152 actc 47065149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 42095067 - 42094762
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42095067 tcagtgcagttgaaggaaaaaaattgaaactagcaaatataagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 42094968  T
Q  101 ctttaattttc-atggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  42094967 ctttaattttcaatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 42094868  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    |||||||||        |||||||||||||||||||| |||||        ||||| ||||||||||||||| |       |||| ||||||||||||||    
T  42094867 gggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaaaaaaatttgggtgtaatcagaaaaacatggggtgtaaatagaaa 42094768  T
Q  300 aactct 305  Q
    ||||||    
T  42094767 aactct 42094762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 32541692 - 32541393
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32541692 tgcagctgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcactcttt 32541593  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  32541592 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 32541493  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  32541492 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 32541394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 46924426 - 46924726
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46924426 tgcagtggaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 46924525  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  46924526 aattttcatggagattgatattgaacatcaaattgtttgatcgatcactttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 46924625  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        ||||||||||||||||| |||||       |||  |||||||||||||||||||    
T  46924626 ttaagaaaatttatataaaagggcaattttggtattataaagataatttaagaaaatttgggtataaccagaaaaacatagggtgtaaatagaaaaactc 46924725  T
Q  305 t 305  Q
    |    
T  46924726 t 46924726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 19699540 - 19699842
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19699540 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttgcttatatccaattgagtatggatgaaaaatattttgattcact 19699639  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||| |||||||||||| ||||||||||||||||||    
T  19699640 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatagctttgtggggtgaaaga-ggtgaaactcactgacaatgaataaaattag 19699738  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  19699739 ggttttaagaaaatttatataaaagggcaattttggtattataatttttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 19699838  T
Q  301 actc 304  Q
    ||||    
T  19699839 actc 19699842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 46321620 - 46321383
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46321620 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 46321521  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  46321520 aatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 46321421  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        |||||||||||||||||||| |||||    
T  46321420 ttaagaaaatttatataaaagggcaattttggtattat 46321383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 40994412 - 40994209
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994412 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 40994313  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  40994312 aattttcatggagattgatattgaacatcaaattgtttgatcgttcgctttgtggggtgaaagagggtgaaactcaccgacaatgaataaaattagggtt 40994213  T
Q  205 ttaa 208  Q
    ||||    
T  40994212 ttaa 40994209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 40995706 - 40995978
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995706 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 40995805  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  40995806 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 40995905  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    |||||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||    
T  40995906 gggttttaagaaaatttatataaaaggacaattttggtattat-aattttttttaagaaaatttgggtgtaacc 40995978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 7900989 - 7901219
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7900989 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 7901088  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  7901089 aatttttatggagattgatattgaatatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 7901188  T
Q  205 ttaaannnnnnnatataaaagggcaattttg 235  Q
    ||||        |||||||||||||||||||    
T  7901189 ttaagaaaatttatataaaagggcaattttg 7901219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 35924653 - 35924952
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35924653 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttaattcactcttt 35924752  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  35924753 aattttcatggagattgatattgaacatcaaatttttttatcgatcgttttgtggggtgaaagatggtgaaactcactgacaatgaataaaattagggtt 35924852  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  35924853 ttaagaaaatttatataaaagggcaattttgatattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 35924952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 27325388 - 27325686
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27325388 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 27325487  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  27325488 aattttcatggagattgataatgaacatcgaattgtttgatcgatcactttgtggggtgaaagagggtgaaactcactgacaatgaataaaattatggtt 27325587  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||| ||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  27325588 ttaagaaaatttatataaaaggacaattttggtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 27325686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 21278569 - 21278264
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21278569 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 21278470  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  21278469 ctttaattttcatggagattgatattgaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 21278371  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||||||||||||| |||||        ||||||||||||| |||||||||       |||| |||||||||||||    
T  21278370 agggttttaagaaaatttatataaaagggcaattttggtattataaaaaaattttaagaaaatttaggtgtaaccagaaaaacatggggtgtaaatagaa 21278271  T
Q  299 aaactct 305  Q
    |||||||    
T  21278270 aaactct 21278264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 26015398 - 26015161
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  26015398 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatattcaattgagtatggatgaaagatattttgattcactcttt 26015299  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||    
T  26015298 aattttcatggagattgatattgaacatcaaattgtttgattgatcgctttgtggagtgaaagagggtgaaactcactgacaatgaataaaattagggtt 26015199  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        ||||||||||| |||||||| |||||    
T  26015198 ttaagaaaatttatataaaagggtaattttggtattat 26015161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 34592232 - 34592500
Alignment:
Q  5 tgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  34592232 tgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaa--ttttttgattcactctt 34592329  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||    
T  34592330 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggt 34592429  T
Q  204 ttt-aaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    ||| |||       |||||||||||||||||||| |||||         ||||||||||||||||||||||    
T  34592430 tttaaaaaaaaattatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaacc 34592500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 25877322 - 25877628
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||| ||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25877322 tcagtgcaattgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 25877421  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgat--cgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |   ||||||||   ||||| |||||||||||||||||  ||||||||||||||||    
T  25877422 ctttaattttcatggagattgatattgaacatcaaattgtttgcttgtgatcgcttgtgggggtgaaagagggtgaaactcagtgacaatgaataaaatt 25877521  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||       ||||||||||||||||||    
T  25877522 agggttttaagaaaatttatataaaaggacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatgaggtgtaaatagaa 25877621  T
Q  299 aaactct 305  Q
    |||||||    
T  25877622 aaactct 25877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 38283229 - 38282930
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | |||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38283229 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaa---attcaattacttatatccaattgagtatggatgaaaaatattttgattcact 38283133  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  38283132 ctttaattttcatggagattgatatttaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 38283034  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||    
T  38283033 agggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagacaaacatggggtgtaaatagaa 38282934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 47779071 - 47778767
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  47779071 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatatttttattcact 47778972  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||| | || |||||| |||||||||||||||||  ||||||||||||||||    
T  47778971 ctttaattttcatggagattgatattgaacatcaaattgtttgttcgtgatctc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 47778873  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||  ||||||||| |||||        |||||||||||||||||||||||        ||| |||||||||||||    
T  47778872 agggttttaagaaaatttatataaaagtacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaa 47778773  T
Q  299 aaactc 304  Q
    ||||||    
T  47778772 aaactc 47778767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 62 - 305
Target Start/End: Complemental strand, 39073895 - 39073652
Alignment:
Q  62 tatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatg-gg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  39073895 tatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgagg 39073796  T
Q  161 gtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaa 260  Q
    || |||||||||||||||||  ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        ||||||||||    
T  39073795 gtgaaagagggtgaaactca-tgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaa 39073697  T
Q  261 tttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    |||||||||||||       |||| ||||||||||||||||||||    
T  39073696 tttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 39073652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 38875596 - 38875455
Alignment:
Q  67 aattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaa 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  38875596 aattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaa 38875497  T
Q  167 gagggtgaaactcaccgacaatgaataaaattagggttttaa 208  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  38875496 gagggtgaaattcactgacaatgaataaaattagggttttaa 38875455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 10533267 - 10533401
Alignment:
Q  108 tttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtttta 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  10533267 tttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtttta 10533366  T
Q  208 aannnnnnnatataaaagggcaattttggaattat 242  Q
    |        |||||||||||||||||||| |||||    
T  10533367 agaaaatttatataaaagggcaattttggtattat 10533401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 47011037 - 47011105
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  47011037 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 47011105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 48613551 - 48613619
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  48613551 agaagaaaaaattcacttatttatatacaatcgagtatgaatgaaagatattttgattcactctttaat 48613619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 24981570 - 24981678
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  24981570 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcaaga 24981667  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  24981668 ttgtttgatcg 24981678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 43777011 - 43777078
Alignment:
Q  40 gaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| ||||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  43777011 gaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaat 43777078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 19020698 - 19020607
Alignment:
Q  55 ttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaaattgtttgatcg 147  Q
    |||||||||| |||| |||||||||||||| || ||||||||||||||||||| || ||| || ||||  ||||||||||| ||||||||||||    
T  19020698 ttacttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttccatagaaattg--attgaacatcagattgtttgatcg 19020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 272
Target Start/End: Original strand, 48642429 - 48642656
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaaat 137  Q
    ||||||| |||||||||| ||||||| |||| || |||| | |||| |  |||||||||||| |||||| |||||| |||||||  ||||||||||| ||    
T  48642429 agaagaaaaaattcacttgcttatatgcaatcgaatatgaacgaaagaagttttgattcactgtttaatctttcatagagattg--attgaacatcatat 48642526  T
Q  138 tgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttgga 237  Q
    |||||||| |     ||| | |||| |||| ||||||| |||   ||||| |||||| |||| |||||||||       |||||||||||||||||||      
T  48642527 tgtttgatag-----tttgtcgggtgaaagggggtgaatctcggtgacaaggaataagattaaggttttaaaaaaaattatataaaagggcaattttgat 48642621  T
Q  238 attatnnnnnnnntttaagaaaatttgggtgtaac 272  Q
    |||||        ||||||||||||||||||||||    
T  48642622 attatcaaaaacttttaagaaaatttgggtgtaac 48642656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 242227 - 242295
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  242227 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 242295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 12846903 - 12846835
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  12846903 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 12846835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 20493416 - 20493484
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  20493416 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 20493484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 29042609 - 29042677
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  29042609 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 29042677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 30173078 - 30173010
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||| | ||||||||||||||||||||||    
T  30173078 agaagaaaaaattcacttatttatatacaatcgagtatgaatgacagatattttgattcactctttaat 30173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 42435877 - 42435809
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  42435877 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 42435809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 43501663 - 43501595
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  43501663 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 43501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 46102426 - 46102486
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  46102426 aaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 46102486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 25226161 - 25226228
Alignment:
Q  40 gaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  25226161 gaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 25226228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 41469656 - 41469571
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    ||||||||||||||||||| |||||| |||  || ||||||||||| || ||||||||||| ||||||| ||| || |||||||||    
T  41469656 agaagaagaaattcacttatttatatgcaaccgaatatggatgaaagatgttttgattcaccctttaatcttctatagagattgat 41469571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 10594735 - 10594795
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  10594735 aaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 10594795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 40863100 - 40863168
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||| |||||||    
T  40863100 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaat 40863168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 45869735 - 45869667
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| |||| || |||||| ||||||||||||||| ||||||    
T  45869735 agaagaaaaaattcacttatttatattcaatcgagtgtgaatgaaagatattttgattcactttttaat 45869667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 47541016 - 47541084
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||| ||||||||||    
T  47541016 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaat 47541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 40305041 - 40304933
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatc-aaa 136  Q
    ||||||| ||||||||||| |||| |  ||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||| |||    
T  40305041 agaagaaaaaattcacttatttatgtgtaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcaaaa 40304944  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  40304943 ttgtttgatcg 40304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 45236586 - 45236539
Alignment:
Q  55 ttacttatatccaattgagtatggatgaaaaatattttgattcactct 102  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||    
T  45236586 ttacttatatgcaattgagtatggatgaaagatgttttgattcactct 45236539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 7883341 - 7883273
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||| |||||| |||||| |||| ||||||  |||||| || |||||||||||||||||||    
T  7883341 agaagaaaaaatccacttatttatatgcaatcgagtatcaatgaaagattttttgattcactctttaat 7883273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 36688179 - 36688111
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| ||||||||||| ||||||  || ||| || |||||||||||||||||||    
T  36688179 agaagaaaaaaatcacttatttatatccaatcgagtataaattaaagatgttttgattcactctttaat 36688111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 39597194 - 39597126
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| |||||| |||| ||||||| || ||| || |||||||||||||||||||    
T  39597194 agaagaaaaaaatcacttatttatatgcaatcgagtatgaattaaagatgttttgattcactctttaat 39597126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 48873897 - 48873830
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||| | |||||| | ||||||||||||||||||||    
T  48873897 agaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaaga-attttgattcactctttaat 48873830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 12429539 - 12429598
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 98  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||    
T  12429539 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattca 12429598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 328345 - 328377
Alignment:
Q  305 tcattcttctctctccctctccatgtctctgct 337  Q
    ||||||||||||||| |||||||||||||||||    
T  328345 tcattcttctctctctctctccatgtctctgct 328377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 25066197 - 25066137
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||| ||||| |||| || ||||||| ||| |  |||||||||||||||||||    
T  25066197 aaattcacttacctatatgcaatagactatggataaaagacgttttgattcactctttaat 25066137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 34012846 - 34012778
Alignment:
Q  56 tacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    ||||||||| |||| || |||||||| || || ||||||||||||||||||| ||| || |||||||||    
T  34012846 tacttatatgcaatagaatatggatggaagatgttttgattcactctttaatcttttatagagattgat 34012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 18894263 - 18894567
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18894263 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 18894362  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18894363 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaactcactgacaatgaataaaattag 18894462  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    | ||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  18894463 gattttaagaaaatttatataaaagggcaattttgatattataaaatttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 18894562  T
Q  301 actct 305  Q
    |||||    
T  18894563 actct 18894567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 7141732 - 7142036
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7141732 tcagtgcagttgaaggaaaaaaattgaaactaacaaatacaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattccct 7141831  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7141832 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaactcactgacaatgaataaaattag 7141931  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        ||||||||||| |||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  7141932 ggttttaagaaaatatatataaaagggtaattttgatattataaattttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 7142031  T
Q  301 actct 305  Q
    |||||    
T  7142032 actct 7142036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 6625852 - 6626156
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6625852 tcagtgcagttgaaggaaaaaaattgaaactagcaaatacaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattccct 6625951  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||     
T  6625952 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggagtgaaagagggtgaaactcactgacaatgaataaaattaa 6626051  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| | |||||||||||||    
T  6626052 ggttttaagaaaatttatataaaagggcaattttgatattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatgggttgtaaatagaaaa 6626151  T
Q  301 actct 305  Q
    |||||    
T  6626152 actct 6626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 6167547 - 6167248
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167547 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 6167448  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||    
T  6167447 aactttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaactagggtt 6167348  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||| | |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  6167347 ttaagaaaatttatataaaagggcaatttttgtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 6167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 13889606 - 13889307
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13889606 tgcagttgaaggaaaaaaattgaaactagcaaatagaggaagaaattcacttacttatattcaattgagtatggatgaaaaatattttgattcactcttt 13889507  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttat-ggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||| |    
T  13889506 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgggggtgaaagagggtgaaactcactgacaatgaataaaattaggat 13889407  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    |||||        |||||||||||||||||||| |||||        ||||||||||||||||||||||        |||| ||||||||||||||||||    
T  13889406 tttaagaaaatttatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaactagaaaaacatggggtgtaaatagaaaaact 13889308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 47 - 305
Target Start/End: Complemental strand, 25332407 - 25332149
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25332407 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgata 25332308  T
Q  147 gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnn 246  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||   |||||        
T  25332307 gatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaatttttttattataaat 25332208  T
Q  247 nnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
        |||||||||||||||||||||||       |||| ||||||||||||||||||||    
T  25332207 attttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 25332149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 29630066 - 29629858
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  29630066 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatattcaattgagtatggatgaaaaatattttgattcact 29629967  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  29629966 ctttaattttcatggagattgatattgaacatcaaattgtttgttcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 29629868  T
Q  199 agggttttaa 208  Q
    ||||||||||    
T  29629867 agggttttaa 29629858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 3095064 - 3095368
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3095064 tcagtgcagttgaaggaaaaaaaattgaaacttgcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaagaatattttgattcac 3095163  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||| |||||||||||||||||  |||||||||||||||    
T  3095164 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaat 3095262  T
Q  198 tagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaataga 297  Q
    |||| ||||||        |||| ||||| ||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||| |    
T  3095263 taggattttaagaaaatttatat-aaaggacaattttggtattataaaaaaattttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaataaa 3095361  T
Q  298 aaaactc 304  Q
    |||||||    
T  3095362 aaaactc 3095368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 29121915 - 29121690
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29121915 tgcagttgaaggaaaaaaattgaaactagtaaatagaagaagaaattcatttacttatatccaattgagtatgtatgaaaaatattttgattcactcttt 29121816  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||            ||||||||||||||| |||| | ||||| | |||||||||| ||||||||||||||||||||||    
T  29121815 aattttcatggagattgatattga------------ttgatcgatcgctttgtgggatgaaagatgatgaaactcactgacaatgaataaaattagggtt 29121728  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        |||||||||||||||||||| |||||    
T  29121727 ttaagaaaatttatataaaagggcaattttggtattat 29121690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 7082120 - 7082205
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    |||||||||||||||||||||||||| |||| |||| ||||||| | |||||||||||||||||||||| || |||| ||||||||    
T  7082120 agaagaagaaattcacttacttatatgcaatcgagtttggatgagagatattttgattcactctttaatcttccatgtagattgat 7082205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 8810236 - 8810168
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| | || |||||||||||||||||||    
T  8810236 agaagaagaaattcacttacttatatgcaattgagtttggatgagagatgttttgattcactctttaat 8810168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 17314887 - 17314955
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| || |||||||||||||||||||    
T  17314887 agaagaagaaattcagttacttatatgcaatagagtatggatgaaatatgttttgattcactctttaat 17314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 18024755 - 18024863
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| || ||||||||||||| ||||| || ||| |||||||  |||||||||||  |    
T  18024755 agaagaagaaattcagttacttatatgcaatcgagtatggatgaaagattttttgattcactccttaatcttccatagagattg--attgaacatcagga 18024852  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  18024853 ttgtttgatcg 18024863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 25331634 - 25331773
Alignment:
Q  164 aaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaattt 263  Q
    |||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||  |||||        |||||||||||||    
T  25331634 aaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttgatattataaattttttttaagaaaattt 25331733  T
Q  264 gggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    || |||||||       |||| |||||||||||||||||||    
T  25331734 ggatgtaaccagaaaaacatg-ggtgtaaatagaaaaactc 25331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8525871 - 8525939
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  8525871 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 8525939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 6675350 - 6675265
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    |||||| ||||| |||||| |||||| |||| |||||||||||||| || ||||||||||||||||||| ||| || |||||||||    
T  6675350 agaagaggaaatccacttatttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttctatagagattgat 6675265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 29622835 - 29622727
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  29622835 agaagaaaaaattcacttatttatatgcaatcgagtataaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcaaga 29622738  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  29622737 ttgtttgatcg 29622727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 6926468 - 6926536
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||| ||||||||||||||    
T  6926468 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaat 6926536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 26947302 - 26947226
Alignment:
Q  48 aattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    ||||||||||||||||| |||||||| ||| |||||| || ||||||||||||||| ||| ||| || |||||||||    
T  26947302 aattcacttacttatatgcaattgagaatgaatgaaagatgttttgattcactcttcaatcttctatagagattgat 26947226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 31090706 - 31090638
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||| |||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  31090706 agaagaaaaaatgcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 31090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 14253240 - 14253169
Alignment:
Q  53 acttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    |||||||||||  |||| |||||  |||||||||||||||||||||||||||||| ||| || |||||||||    
T  14253240 acttacttatacacaatagagtaatgatgaaaaatattttgattcactctttaatcttttatagagattgat 14253169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 32173138 - 32173097
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  32173138 caatcgagtatagatgaaaaatattttgattcactctttaat 32173097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 13444693 - 13444625
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| |||| | |||| ||||||| |||||| || |||||||||||||||||||    
T  13444693 agaagaaaaaaatcacttatttatgtgcaatcgagtatgaatgaaagatgttttgattcactctttaat 13444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 29880878 - 29880818
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||| ||||||||||| ||||||| || ||| || |||||||||||||||||||    
T  29880878 aaatccacttatttatatccaatcgagtatgaataaaagatgttttgattcactctttaat 29880818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 11368293 - 11368226
Alignment:
Q  40 gaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||| | ||||||||||    
T  11368293 gaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgacttactctttaat 11368226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 5715505 - 5715573
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| |||||| ||||  |||||| |||||| || |||||| ||||||||||||    
T  5715505 agaagaaaaaaatcacttatttatatgcaatccagtatgaatgaaagatgttttgagtcactctttaat 5715573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 2482222 - 2481923
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2482222 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 2482123  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  2482122 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 2482023  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  2482022 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 2481923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 11172919 - 11172616
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11172919 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgtaaaatattttgattcact 11172820  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||    
T  11172819 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgaggggtgaaagagggtgaaactcactgacaatgaataaaattag 11172720  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  11172719 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccaaaaaaacatg-ggtgtaaatagaaaa 11172621  T
Q  301 actct 305  Q
    |||||    
T  11172620 actct 11172616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 24317702 - 24318001
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24317702 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 24317801  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  24317802 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 24317901  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  24317902 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 24318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 2137935 - 2137663
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2137935 tcagtgcagttgaaggaaaaaaattgaaactaataaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcatt 2137836  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  2137835 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 2137736  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    ||||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||    
T  2137735 ggttttaagaaaatttatataaaaggacaattttggtattataatttttttttaagaaaatttgggtgtaacc 2137663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 305
Target Start/End: Original strand, 39982891 - 39983192
Alignment:
Q  3 agtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 102  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39982891 agtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 39982990  T
Q  103 ttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattaggg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  39982991 ttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaggg 39983090  T
Q  203 ttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaac 302  Q
    ||||||        |||||||||||||||||||| |||||        ||||| |||||||||||||||||        ||| |||||||||||||||||    
T  39983091 ttttaagaaaatttatataaaagggcaattttggtattat-aaaaatttttaaaaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaaaaac 39983189  T
Q  303 tct 305  Q
    |||    
T  39983190 tct 39983192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 49823722 - 49824021
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823722 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 49823821  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  49823822 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaacgaataaaattagggtt 49823921  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||| ||||||||||| |||||        ||||||||||||||||| |||||        ||| |||||||||||||||||||    
T  49823922 ttaagaaaatttatataaaaaggcaattttggtattataaaaaaaatttaagaaaatttgggtataaccagaaaaatatggggtgtaaatagaaaaactc 49824021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 51676788 - 51676555
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51676788 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 51676689  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||     
T  51676688 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaactcactgacaatgaataaaatta- 51676590  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttg 235  Q
    ||||||||        |||||||||||||||||||    
T  51676589 ggttttaagaaaatttatataaaagggcaattttg 51676555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 39568947 - 39568649
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39568947 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 39568848  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39568847 aatttttacggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 39568748  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||| ||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  39568747 ttaagaaaatttatataaaaaggcaattttggtattat-aattttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 39568649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 52043965 - 52043667
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52043965 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactcttt 52043866  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52043865 aattttcatggagattgatattgaacatcaaattatttgatcgatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattagggtt 52043766  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
     |||        |||||||||||||||||||| |||||        |||||||||||||||||||||||        ||| |||||||||||||||||||    
T  52043765 ctaagaaaatttatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaaaaactc 52043667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 34270334 - 34270034
Alignment:
Q  5 tgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  34270334 tgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaatttgattcactctt 34270235  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||    
T  34270234 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggt 34270135  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    |||||        |||||||||||||||||||| |||||        ||||||||||||||| |||||||       |||| ||||||||||||||||||    
T  34270134 tttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaatttggatgtaaccagaaaaacatggggtgtaaatagaaaaact 34270035  T
Q  304 c 304  Q
    |    
T  34270034 c 34270034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 44722427 - 44722727
Alignment:
Q  5 tgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44722427 tgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttaattcactctt 44722526  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||    
T  44722527 taatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggt 44722626  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    ||||||       |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| | ||||||||||||||||    
T  44722627 tttaaaaaaatttatataaaagggcaattttgatattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatgggatgtaaatagaaaaact 44722726  T
Q  304 c 304  Q
    |    
T  44722727 c 44722727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 40536222 - 40535923
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  40536222 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcagttacttatatccaattgagtatggatgaaaaatattttaattcaat 40536123  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  40536122 ctttaattttcacggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcattgacaatgaataaaattag 40536023  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  40536022 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 40535923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 18909693 - 18909900
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909693 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 18909792  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||     
T  18909793 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaa 18909892  T
Q  201 ggttttaa 208  Q
    | ||||||    
T  18909893 gattttaa 18909900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 20582114 - 20582414
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20582114 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 20582213  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| | |||||||||    
T  20582214 tctttaattttcatggagattgatattggacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaacgtataaaatta 20582313  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    ||||||| ||       |||||||||| ||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||    
T  20582314 gggtttt-aagaaatttatataaaaggacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 20582412  T
Q  300 aa 301  Q
    ||    
T  20582413 aa 20582414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 40400543 - 40400848
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40400543 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 40400642  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  40400643 ctttaattttcatggagattgatattgaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 40400741  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||    
T  40400742 agggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaa 40400841  T
Q  299 aaactct 305  Q
    |||||||    
T  40400842 aaactct 40400848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 52025169 - 52025472
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52025169 tcagtgcagttgaaggaaaaaaattgaaactaacaaatagaagaagaaattcacttacttatatcgaattgagtatggatgaaaaatattttgattcact 52025268  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||||||||||||||| |||||| |||||||||||    
T  52025269 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggagtgaaagagggtgaaactcactgacaataaataaaattag 52025368  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||||||||||||| |||||||       |||| | |||||||||||||    
T  52025369 ggttttaagaaaatttatataaaagggcaattttggtattat-aattttttttaagaaaatttggatgtaaccagaaaaacatgggatgtaaatagaaaa 52025467  T
Q  301 actct 305  Q
    |||||    
T  52025468 actct 52025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 14246815 - 14246512
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14246815 tcagtgcagttgaaggaaaaaaattgaaattagcaaatagaagaaaaaattcacttacttatatccaattgagtatggatgtaaaatattttgattcact 14246716  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||||||||    
T  14246715 ctttaattttcatggggattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagaggatgaaactcactggcaatgaataaaattag 14246616  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||| ||||||||| |||||||       |||| |||||||||| ||||    
T  14246615 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaaaaaaatttggatgtaaccagaaaaacatggggtgtaaataaaaaa 14246516  T
Q  301 actc 304  Q
    ||||    
T  14246515 actc 14246512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 42948713 - 42949012
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  42948713 tgcagttgaaggaaataaattgaaactagcaaatagaagaagaaattcacttacttatatctaattgagtatgtatgaaaaatattttgattcactcttt 42948812  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||    
T  42948813 aattttcatgaagattgatattgaacatcaaattgtttgatcgatcgttttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaggatt 42948912  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    | ||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  42948913 taaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaaactc 42949012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 35 - 305
Target Start/End: Complemental strand, 26164061 - 26163792
Alignment:
Q  35 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26164061 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatca 26163962  T
Q  135 aattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaatttt 234  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||        |||||||| |||||||||    
T  26163961 aattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaaaggcaatttt 26163862  T
Q  235 ggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    ||  ||||         ||||||||||||||||||||||       |||| ||||||||||||||||||||    
T  26163861 ggtgttataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 26163792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 13234895 - 13234591
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13234895 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttagatccaattgagtagggatgaaaaatattttgattcact 13234796  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggg---gtaaaagagggtgaaactcaccgacaatgaataaaat 197  Q
    ||||||||| ||||||||||||||||||||||||||   |||||||||| ||||| ||||   | || |||||||||||||||| |||||||||||||||    
T  13234795 ctttaatttccatggagattgatattgaacatcaaa---tttgatcgatggctttgtgggggtgaaagagagggtgaaactcactgacaatgaataaaat 13234699  T
Q  198 tagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaataga 297  Q
    |||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||    
T  13234698 tagggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaataga 13234599  T
Q  298 aaaactct 305  Q
    ||||||||    
T  13234598 aaaactct 13234591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 34276514 - 34276269
Alignment:
Q  59 ttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatg 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34276514 ttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtg 34276415  T
Q  159 gggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaa 258  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        ||||||||    
T  34276414 gggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaa 34276315  T
Q  259 aatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||||| |||||||       |||| |||||||||||||||||||    
T  34276314 aatttggatgtaaccagaaaaacatggggtgtaaatagaaaaactc 34276269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 35 - 304
Target Start/End: Original strand, 50728410 - 50728677
Alignment:
Q  35 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  50728410 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaatt--tttgattcactctttaattttcatggagattgatattgaacatca 50728507  T
Q  135 aattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtttt-aaannnnnnnatataaaagggcaattt 233  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||       |||| ||||||||||||    
T  50728508 aattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaaaaaaaaattatat-aaagggcaattt 50728606  T
Q  234 tggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  50728607 tggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 50728677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 305
Target Start/End: Complemental strand, 28852344 - 28852099
Alignment:
Q  60 tatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatgg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  28852344 tatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtgg 28852245  T
Q  160 ggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaa 259  Q
    ||| ||||||| |||||||||| ||||||||||||||||||||||||||        || ||||||||||||||||| |||||        |||||||||    
T  28852244 ggtgaaagaggttgaaactcactgacaatgaataaaattagggttttaagaaaatttatgtaaaagggcaattttggtattataatttttttttaagaaa 28852145  T
Q  260 atttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    ||||||||||||||       |||| ||||||||||||||||||||    
T  28852144 atttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 28852099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 51290800 - 51290947
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51290800 tcagtgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 51290898  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51290899 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 51290947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 89 - 305
Target Start/End: Original strand, 6653716 - 6653931
Alignment:
Q  89 ttttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  6653716 ttttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgacagagggtgaaactcactgacaat 6653815  T
Q  189 gaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggt 288  Q
    ||||||||||||||||||||        |||||||||||||||||| | |||||         ||||||||||||||||||||||       |||| |||    
T  6653816 gaataaaattagggttttaagaaaatttatataaaagggcaattttagtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggt 6653914  T
Q  289 gtaaatagaaaaactct 305  Q
    |||||||||||||||||    
T  6653915 gtaaatagaaaaactct 6653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 304
Target Start/End: Original strand, 15941497 - 15941665
Alignment:
Q  136 attgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttg 235  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||    
T  15941497 attgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttg 15941596  T
Q  236 gaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    | |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  15941597 gtattataaaaaaattttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 15941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 305
Target Start/End: Complemental strand, 33010150 - 33009979
Alignment:
Q  133 caaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaatt 232  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||||||        || |||||||||||||    
T  33010150 caaattgtttgatcgatcgctttgtggggtgaaagagggtgaaattcactgacaatgaataaaattagggttttaagaaaatttatgtaaaagggcaatt 33010051  T
Q  233 ttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    |||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||||||    
T  33010050 ttggtattataaaaaaaatttaagaaaatttgggtgtaaccaaaaaaacatg-ggtgtaaatagaaaaactct 33009979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 1441975 - 1442060
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| || |||||||||| |||||||| |||||| |||||||||    
T  1441975 agaagaagaaattcatttacttatatgcaatcgagtatggatgaaatatgttttgattcattctttaatctttcatagagattgat 1442060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 12602568 - 12602676
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||| |||||||||||||||||||||| |||||| ||||||   |||||||||||  |    
T  12602568 agaagaaaaaattcacttatttatatgcaatcgagtataaatgaaatatattttgattcactctttaatctttcatagagatt--aattgaacatcagga 12602665  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  12602666 ttgtttgatcg 12602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 23443713 - 23443645
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  23443713 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 23443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 26308234 - 26308302
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  26308234 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 26308302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 32087144 - 32087212
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  32087144 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 32087212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 35274494 - 35274562
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  35274494 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 35274562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 41713498 - 41713566
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  41713498 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 41713566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 48933946 - 48934014
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  48933946 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 48934014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 1701562 - 1701496
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||| |||||| |||  ||| |||||||||||||| ||| ||||||||||||||||||    
T  1701562 aagaagaaattcatttacttgtatgaaatcgagtatggatgaaagataatttgattcactctttaat 1701496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 14289711 - 14289638
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttca 112  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||| ||||||||||| ||||    
T  14289711 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactctttaatcttca 14289638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 45926088 - 45926161
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    |||||||||||||| |||| |||||||||||||| || ||||||||||||||| ||| ||| || |||||||||    
T  45926088 tcacttacttatatgcaatcgagtatggatgaaagatgttttgattcactcttcaatcttctatagagattgat 45926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 5673529 - 5673597
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| || ||| |||| ||||||| |||||| || |||||||||||||||||||    
T  5673529 agaagaaaaaattcacttatttttatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 5673597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 6016030 - 6015962
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||| ||||||||||    
T  6016030 agaagaaaaaattcacttatttatatgcaatagagtatgaatgaaagatgttttgattgactctttaat 6015962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 8113281 - 8113221
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  8113281 aaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 8113221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 13073778 - 13073838
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  13073778 aaattcacttatttatatgcaatcgagtatgaatgaaagattttttgattcactctttaat 13073838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 17475043 - 17475111
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||| ||||||||||||||    
T  17475043 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgtttttattcactctttaat 17475111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 17702657 - 17702725
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| ||||||  ||| ||||||| |||||| || |||||||||||||||||||    
T  17702657 agaagaaaaaattcacttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaat 17702725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 29921303 - 29921239
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||    
T  29921303 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctt 29921239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 32117489 - 32117421
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| ||||  |||||| |||||| || |||||||||||||||||||    
T  32117489 agaagaaaaaattcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcactctttaat 32117421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 46291138 - 46291070
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| || ||| |||| ||||||| |||||| || |||||||||||||||||||    
T  46291138 agaagaaaaaattcacttatttgtatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 46291070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 51001448 - 51001380
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||| |||||||    
T  51001448 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaat 51001380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 40499200 - 40499308
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||||||  ||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| |||||| ||||||   |||||||||||  |    
T  40499200 agaagaaaaaattcgattatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagatt--aattgaacatcagga 40499297  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  40499298 ttgtttgatcg 40499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 19513631 - 19513565
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||| ||||||||||  |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  19513631 aagaaaaaattcacttgtttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 19513565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 24663742 - 24663647
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aattgtttgatc 146  Q
    ||||||||||||||  ||| |||||||| ||||| || |||| |||||||||||||| |||||| |||||||  |||||||||||  |||||||||||    
T  24663742 tcacttacttatatgaaatcgagtatgggtgaaagatgttttaattcactctttaatctttcatagagattg--attgaacatcaggattgtttgatc 24663647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 3486367 - 3486408
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  3486367 caatcgagtatggatgaaaaatgttttgattcactctttaat 3486408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 19247316 - 19247248
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||| | |||||| |||| ||||||| |||||| || |||||||||||| ||||||    
T  19247316 agaagaaaaaattcactaatttatatgcaatcgagtatgaatgaaagatgttttgattcactatttaat 19247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 32562091 - 32562151
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| ||||||||||| || |||||||    
T  32562091 aaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattaacactttaat 32562151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 45942104 - 45942164
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| || ||| || |||||||||||||||||||    
T  45942104 aaattcacttatttatatgcaatcgagtatgaattaaagatgttttgattcactctttaat 45942164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 7009660 - 7009696
Alignment:
Q  71 gagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||| || |||||||||||||||||||    
T  7009660 gagtatggatgaaagatgttttgattcactctttaat 7009696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 25085521 - 25085792
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25085521 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 25085620  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  25085621 ctttaattttcatggagattgatattgaacatcaaattgtttaatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 25085720  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaac 272  Q
    |||||||||       ||||||||||||||||||||||||||        ||||| ||||||||||||||||    
T  25085721 ggttttaaaaaaaattatataaaagggcaattttggaattataaaaaacttttaaaaaaatttgggtgtaac 25085792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 304
Target Start/End: Complemental strand, 6469267 - 6468966
Alignment:
Q  2 cagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactc 101  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6469267 cagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttact-atatccaattgagtatggatgaaaaatattttgattcactc 6469169  T
Q  102 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  6469168 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagg 6469069  T
Q  202 gttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaa 301  Q
    |||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||    
T  6469068 gttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaa 6468969  T
Q  302 ctc 304  Q
    |||    
T  6468968 ctc 6468966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25143493 - 25143734
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25143493 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 25143592  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  25143593 ctttaattttcatggagattgatattgaacatcaaattgtttaatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 25143692  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    |||||||||       ||||||||||||||||||||||||||    
T  25143693 ggttttaaaaaaaattatataaaagggcaattttggaattat 25143734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 33281371 - 33281674
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33281371 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 33281470  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  33281471 ctttaattttcatggagattgatattgaacatcaaattgtttgatctatcgctttatgggatgaaagagggtgaaactcactgacaatgaataaaattag 33281570  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||  |||||||||||||||    
T  33281571 ggttttaagaaaatttatataaaagggcaattttgatattataatttttttttaagaaaatttgggtgtaaccagaaaaacatagggtgtaaatagaaaa 33281670  T
Q  301 actc 304  Q
    ||||    
T  33281671 actc 33281674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 31511009 - 31510707
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31511009 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 31510910  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31510909 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaactcactgacaatgaataaaattag 31510810  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
     |||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       |||| || ||||||||||||    
T  31510809 agttttaagaaaatttatataaaagggcaattttgatattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggcgtaaatagaaaa 31510711  T
Q  301 actc 304  Q
    ||||    
T  31510710 actc 31510707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 43293249 - 43292946
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43293249 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcacc 43293150  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||    
T  43293149 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggggaaagaaggtgaaactcactgacaatgaataaaattag 43293050  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||        ||||||||||||||||||||||        |||| |||||||||||||||    
T  43293049 ggttttaagaaaatttatataaaagggcaattttgatattataaattttttttaagaaaatttgggtgtaactagaaaaacatggggtgtaaatagaaaa 43292950  T
Q  301 actc 304  Q
    ||||    
T  43292949 actc 43292946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 37866398 - 37866697
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37866398 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 37866497  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  37866498 aatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagagtgaaactcactgacaatgaataaaattagggtt 37866597  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    |||||       |||||||||||||||||||  |||||         |||||||||||||| |||||||       |||| |||||||||||||||||||    
T  37866598 ttaaaaaaaattatataaaagggcaattttgatattataaaaaaaaattaagaaaatttggatgtaaccagaaaaacatggggtgtaaatagaaaaactc 37866697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 38759960 - 38759657
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  38759960 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttagatccaattgagtatcgatgaaaaatattttgattcact 38759861  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  38759860 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcattgacaatgaataaaattag 38759761  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||||||||||| ||||||| |       |||| |||||||||||||||    
T  38759760 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttaggtgtaatcagaaaaacatggggtgtaaatagaaaa 38759661  T
Q  301 actc 304  Q
    ||||    
T  38759660 actc 38759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 4155706 - 4155407
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4155706 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctta 4155607  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4155606 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 4155507  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||| ||||||||| |||||        ||||||||||||||| ||||| |       |||| |||||||||||||||||||    
T  4155506 ttaagaaaatttatataaaaggacaattttggtattat-aaaaaaatttaagaaaatttggatgtaatcagaaaaacatggggtgtaaatagaaaaactc 4155408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 300
Target Start/End: Original strand, 9066206 - 9066500
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9066206 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactcttt 9066305  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9066306 aattttcatggagattgatattgaacatcaaattatttgatcgatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattagggtt 9066405  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
     |||        |||||||||||||||||| | |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  9066406 ctaagaaaatttatataaaagggcaatttttgtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 9066500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 13145452 - 13145250
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13145452 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 13145353  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |    
T  13145352 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggct 13145253  T
Q  205 tta 207  Q
    |||    
T  13145252 tta 13145250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 29920961 - 29921202
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29920961 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaaaaaattcacttacttatatccaattgagtatggatgaaaaatatgttgattcact 29921060  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||||||||||||||||    
T  29921061 ctttaattttcatggggattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactggcaatgaataaaattag 29921160  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||||||        |||||||||| ||||||||| |||||    
T  29921161 ggttttaagaaaatttatataaaaggacaattttggtattat 29921202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 19617169 - 19616875
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19617169 tcagtgcagttgaagggaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 19617070  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     || |||||| ||||||||||||||||    |||||||||||||||||    
T  19617069 ctttaattttcatggagattgatattgaacatcaaattgtttgatcga-----ttgtggggtgaaagagggtgaaactc----acaatgaataaaattag 19616979  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  19616978 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 19616879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 19034283 - 19034040
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19034283 tgcagttgaaggaaaaaaattgaaagtagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 19034184  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcac------cgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||       ||||||||||||||||    
T  19034183 aattttcatggagattgatattgtacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactaacaatgacaatgaataaaatt 19034084  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    |||||||||||       ||||||||| |||||||||| |||||    
T  19034083 agggttttaaaaaaatttatataaaagagcaattttggtattat 19034040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 43517859 - 43517554
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43517859 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 43517760  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||| | || |||||| |||||||||||||||||  ||||||||||||||||    
T  43517759 ctttaattttcatggagattgatattgaacatcaaattgtttgttcgtgatcac-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 43517661  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||        |||| ||||||||||||    
T  43517660 agggttttaagaaaatttatataaaaggacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaatatgaagtgtaaatagaa 43517561  T
Q  299 aaactct 305  Q
    |||||||    
T  43517560 aaactct 43517554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 5 - 272
Target Start/End: Original strand, 24559616 - 24559874
Alignment:
Q  5 tgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559616 tgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 24559715  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||          |||||||||||||  ||||||||||||||||||||    
T  24559716 taattttcatggagattgatattgaacatgaaattgtttgatcgatcgctttgtg----------gggtgaaactcacttacaatgaataaaattagggt 24559805  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaac 272  Q
    |||||        |||||| ||| ||||||||| |||||        ||||||||||||||||||||||    
T  24559806 tttaagaaaatttatataataggacaattttggtattataaaaaaaatttaagaaaatttgggtgtaac 24559874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 24600648 - 24600843
Alignment:
Q  5 tgcagttgaaggaaaaaag--ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 102  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24600648 tgcagttgaaggaaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 24600747  T
Q  103 ttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattaggg 202  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||          |||||||||||||  |||||||||||||||||||    
T  24600748 ttaattttcatggagattgatattgaacatgaaattgtttgatcgatcgctttgtg----------gggtgaaactcacttacaatgaataaaattaggg 24600837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 15272090 - 15272022
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  15272090 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaat 15272022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 18979166 - 18979274
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   ||||||||||| ||    
T  18979166 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcagaa 18979263  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  18979264 ttgtttgatcg 18979274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 37106725 - 37106825
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-attgtttga 144  Q
    ||||||||||| |||||| |||||||||||| |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||||| |||||||||    
T  37106725 aaattcacttatttatatgcaattgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcaagattgtttga 37106822  T
Q  145 tcg 147  Q
    |||    
T  37106823 tcg 37106825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 27309645 - 27309686
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27309645 caattgagtatggatgaaaaatattttgattcactctttaat 27309686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 4621885 - 4621953
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  4621885 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 4621953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 7339512 - 7339580
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  7339512 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 7339580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 8048219 - 8048151
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  8048219 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 8048151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 10665548 - 10665480
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  10665548 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 10665480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 18865268 - 18865336
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  18865268 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 18865336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 31485363 - 31485431
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  31485363 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 31485431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 37274184 - 37274116
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  37274184 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 37274116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 40739861 - 40739929
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  40739861 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 40739929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 41881265 - 41881197
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  41881265 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 41881197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 42436717 - 42436649
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  42436717 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 42436649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 43547977 - 43547909
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| |||||||||||| |||||||||    
T  43547977 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcgctctttaat 43547909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 6245952 - 6246020
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| | ||||| |||||| || |||||||||||||||||||    
T  6245952 agaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaagatgttttgattcactctttaat 6246020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8233271 - 8233339
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||| | |||||| || |||||||||||||||||||    
T  8233271 agaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatgttttgattcactctttaat 8233339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 10552887 - 10552955
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||| |||||||||||    
T  10552887 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactctttaat 10552955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 12188728 - 12188669
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 98  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||  || ||||||||||    
T  12188728 agaagaagaaattcacttacttatatgcaatcaagtatggatgaacgatgttttgattca 12188669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 35318856 - 35318794
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattt 109  Q
    ||||| ||||||| |||| |||| ||||||||| |||| || |||||||||||||||||||||    
T  35318856 aaattgacttactaatatgcaatcgagtatggaagaaagatgttttgattcactctttaattt 35318794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 13210424 - 13210364
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||| | || |||||||||||||||||||    
T  13210424 aaattcacttatttatatgcaatcgagtatgaatgagagatgttttgattcactctttaat 13210364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 18522711 - 18522771
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| ||||  |||||| |||||| || |||||||||||||||||||    
T  18522711 aaattcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcactctttaat 18522771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 38768999 - 38769059
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||| |||||||    
T  38768999 aaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaat 38769059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 24478122 - 24478189
Alignment:
Q  40 gaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| ||||| ||||| |||||| |||| ||||||| |||||| || |||||||||||| ||||||    
T  24478122 gaagaaaaaatttacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactatttaat 24478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 36294643 - 36294688
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaa 84  Q
    ||||||||||||||||  |||||||| |||| ||||||||||||||    
T  36294643 agaagaagaaattcacacacttatatgcaatcgagtatggatgaaa 36294688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 37341548 - 37341642
Alignment:
Q  53 acttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aattgtttgatcg 147  Q
    ||||| ||||||  ||| ||||||| |||||| || ||||||||||||||||||| |||||| ||||||   |||||||||||  ||||||||||||    
T  37341548 acttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagatt--aattgaacatcaggattgtttgatcg 37341642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 52912729 - 52912425
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52912729 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 52912630  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  52912629 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggcgaaactcactgacaatgaataaaattag 52912530  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||        || ||||||||||||||||||||       |||| |||||||||||||||    
T  52912529 ggttttaagaaaatttatataaaagggcaattttgatattataaatttttttaaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 52912430  T
Q  301 actct 305  Q
    |||||    
T  52912429 actct 52912425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 20434635 - 20434934
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434635 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 20434734  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20434735 aattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattagggtt 20434834  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        || ||||||||||||||||||||       |||| |||||||||||||||||||    
T  20434835 ttaagaaaatttatataaaagggcaattttggtattataattttttttaaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 20434934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 20738266 - 20738569
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20738266 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 20738365  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  20738366 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 20738465  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||| |||||||||||||||||       |||| |||||||||||||||    
T  20738466 ggttttaagaaaatttatataaaagggcaattttggtattat-aaaaacttttaaaaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 20738564  T
Q  301 actct 305  Q
    |||||    
T  20738565 actct 20738569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 42723710 - 42723406
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42723710 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcactcacttatatccaattgagtatggatgaaaaatattttgattcact 42723611  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  42723610 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 42723511  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        || ||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  42723510 ggttttaagaaaatttatgtaaaagggcaattttggtattataatttttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 42723411  T
Q  301 actct 305  Q
    |||||    
T  42723410 actct 42723406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 42349223 - 42349522
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42349223 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 42349322  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  42349323 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 42349422  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||        ||| |||||||||||||||||||    
T  42349423 ttaagaaaatttatataaaaggacaattttggtattataaattttttttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaaaaactc 42349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 56018017 - 56017714
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56018017 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 56017918  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||     
T  56017917 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactggcaatgaataaaattaa 56017818  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        ||||||||||||||| |||||||       |||| |||||||||||||||    
T  56017817 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttggatgtaaccagaaaaacatggggtgtaaatagaaaa 56017718  T
Q  301 actc 304  Q
    ||||    
T  56017717 actc 56017714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 23894764 - 23894460
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23894764 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 23894665  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||     
T  23894664 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaactcactgacaatgaataaaattaa 23894565  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||| ||||||||  |||||        |||||||||||| |||||||||        |||| |||||||||||||||    
T  23894564 ggttttaataaaatttatataaaaggacaattttgatattataaaaaaattttaagaaaattcgggtgtaactagaaaaacatggggtgtaaatagaaaa 23894465  T
Q  301 actct 305  Q
    |||||    
T  23894464 actct 23894460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 312
Target Start/End: Complemental strand, 55215168 - 55214861
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  55215168 tgcagttgaagaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctta 55215069  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||    
T  55215068 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactcacaatgaataaaattagggtt 55214969  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  55214968 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 55214869  T
Q  305 tcattctt 312  Q
    | ||||||    
T  55214868 taattctt 55214861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 55220390 - 55220690
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  55220390 tgcagttgaagaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctta 55220489  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||    
T  55220490 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactcacaatgaataaaattagggtt 55220589  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  55220590 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 55220689  T
Q  305 t 305  Q
    |    
T  55220690 t 55220690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 46564048 - 46563749
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46564048 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 46563949  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||    
T  46563948 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgaggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 46563849  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||       ||||  ||||||||||||||||||    
T  46563848 ttaagaaaatttatataaaagggcaattttgatattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggagtgtaaatagaaaaactc 46563750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 56363227 - 56363526
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  56363227 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatctaatttagtatggatgaaaaatattttgattcactcttt 56363325  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  56363326 aattttcatggagattgatattgaacatcaaattgtttgatcgattgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 56363425  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        ||||||||||||||||||||| |       |||| |||||||||||||||||||    
T  56363426 ttaagaaaatttatataaaagggcaattttggtattataaaaagtttttaagaaaatttgggtgtaatcagaaaaacatggggtgtaaatagaaaaactc 56363525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 55183092 - 55182793
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55183092 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 55182993  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||    
T  55182992 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgttttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaggatt 55182893  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||||||||||||   |||||        ||||||||||||||| |||||||       |||| |||||||||||||||||||    
T  55182892 ttaagaaaatttatataaaagggcaattttaatattataaaaaaaatttaagaaaatttggatgtaaccaaaaaaacatggggtgtaaatagaaaaactc 55182793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 39540036 - 39539734
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39540036 tcagtgcagttgaaggaaaaaaattgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 39539937  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  39539936 ctttaattttcttgaagattgatattgaacatcaaattgtttgatcgatcgctttgtggagtgaaagagggtgaaactcactgacaatgaataaaattag 39539837  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        ||||||||||| |||||||| ||| |        |||||||||||||||||||||||       |||| |||||||||||| ||    
T  39539836 ggttttaagaaaatttatataaaagggtaattttggtattgt-aattttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagagaa 39539738  T
Q  301 actc 304  Q
    ||||    
T  39539737 actc 39539734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 28406017 - 28405712
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatat-tttgattca 98  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  28406017 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaaatttgattca 28405918  T
Q  99 ctctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  28405917 ctctttaattttcatggagattgatattgaacatcaaattgtttgatccatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatt 28405818  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    |||||||||||       |||||||||||||||||||| |||||        ||||||||||||||| |||||||       |||| |||||||||||||    
T  28405817 agggttttaaatttttatatataaaagggcaattttggtattataaaaaaattttaagaaaatttggatgtaaccagaaaaacatggggtgtaaatagaa 28405718  T
Q  299 aaactc 304  Q
    ||||||    
T  28405717 aaactc 28405712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 19873651 - 19873352
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    ||||    
T  19873651 tcagtgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcactcacttatatccaattgagtatggatgaaaaatatttt----cact 19873557  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  19873556 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattag 19873457  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||| ||||       |||| |||||||||||||||    
T  19873456 ggttttaagaaaatttatataaaagggcaattttggtattataatttttttttaagaaaatttgggtgcaaccagaaaaacatggggtgtaaatagaaaa 19873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 37233743 - 37233438
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37233743 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaattttgattcac 37233644  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttat-ggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||| ||||||||||||||||    
T  37233643 tctttaattttcatagagattgatattgaacatcaaattgtttgatcgatcgctttgtgggggtgaaagagggtaaaactcactgacaatgaataaaatt 37233544  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||| ||||||||| |||||        ||||||||||||| |||||||||       |||| |||||||||||||    
T  37233543 agggttttaagaaaatttatataaaaggacaattttggtattataaaaaaattttaagaaaatttaggtgtaaccagaaaaacatggggtgtaaatagaa 37233444  T
Q  299 aaactc 304  Q
    ||||||    
T  37233443 aaactc 37233438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 38291465 - 38291157
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag---ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatatttt-gatt 96  Q
    ||||||||||||||||||||||    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  38291465 tcagtgcagttgaaggaaaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaatttttgatt 38291366  T
Q  97 cactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaa 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  38291365 cactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaa 38291266  T
Q  197 ttagggttttaaannnnnnnatataaaagggcaattttggaattat-nnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaata 295  Q
    ||||||||||||        |||||||||||||||||| | |||||         ||||| |||||||||||||||||       |||| ||||||||||    
T  38291265 ttagggttttaagaaaatttatataaaagggcaattttagtattataaaaaaaaatttaaaaaaatttgggtgtaaccagaaaaacatggggtgtaaata 38291166  T
Q  296 gaaaaactc 304  Q
    |||||||||    
T  38291165 gaaaaactc 38291157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 53874614 - 53874379
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53874614 tcagtgcaggtgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 53874515  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  53874514 tctttaattttcatagagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtaaaactcactgacaatgaataaaatta 53874415  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttg 235  Q
      |||||||        |||||||||||||||||||    
T  53874414 aagttttaagaaaatttatataaaagggcaattttg 53874379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 10541685 - 10541383
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10541685 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 10541586  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  10541585 ctttaattttcatggagattgatattgaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 10541487  T
Q  199 agggttttaaannnnnnnatat-aaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaataga 297  Q
    ||||||||||        |||| |||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||    
T  10541486 agggttttaagaaaatttatataaaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaataga 10541387  T
Q  298 aaaa 301  Q
    ||||    
T  10541386 aaaa 10541383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 52839287 - 52839050
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  52839287 tgcagttgaaggaaaaaaattgaaaccagcaaatagaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactattt 52839188  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||| | |||||||||||||||||| ||||||||||||||||||||||    
T  52839187 aatttttatggagattgatattgaacatcaaattgtttgatcaatcggtttgtgggatgaaagagggtgaaactcactgacaatgaataaaattagggtt 52839088  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        |||||||||||||||||||| |||||    
T  52839087 ttaagaaaatttatataaaagggcaattttggtattat 52839050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 25858185 - 25858352
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25858185 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 25858284  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggt 172  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  25858285 aattttcatggagactgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggt 25858352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 31710364 - 31710508
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31710364 tcagtgcagttgaaggaaaaaaattgaaactatcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 31710463  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgat 145  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  31710464 ctttaattttcatggagattgatattgaacgtcaaattgtttgat 31710508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 67 - 305
Target Start/End: Original strand, 614412 - 614651
Alignment:
Q  67 aattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgt---ttgatcgatcgctttatggggta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||     
T  614412 aattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgttgatcgatcgctttgtggggtg 614511  T
Q  164 aaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaattt 263  Q
    |||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||| |||||         ||||||||||||    
T  614512 aaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaaa--ttaagaaaattt 614609  T
Q  264 gggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    |||||||||        |||| ||||||||||||||||||||    
T  614610 gggtgtaactagaaaaacatggggtgtaaatagaaaaactct 614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 94 - 304
Target Start/End: Complemental strand, 43829730 - 43829521
Alignment:
Q  94 attcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaata 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  43829730 attcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaata 43829631  T
Q  194 aaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaa 293  Q
    |||||||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||    
T  43829630 aaattagggttttaagaaaatttatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaa 43829532  T
Q  294 tagaaaaactc 304  Q
    |||||||||||    
T  43829531 tagaaaaactc 43829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 85 - 305
Target Start/End: Complemental strand, 1356538 - 1356317
Alignment:
Q  85 aatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcacc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||      
T  1356538 aatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcagt 1356440  T
Q  183 gacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnnca 282  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       ||    
T  1356439 gacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccaaaaaaaca 1356340  T
Q  283 tgaggtgtaaatagaaaaactct 305  Q
    || ||||||||||||||||||||    
T  1356339 tggggtgtaaatagaaaaactct 1356317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 305
Target Start/End: Original strand, 5098717 - 5098852
Alignment:
Q  170 ggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgt 269  Q
    |||||||||||| ||||||||||||||||||||||||||        ||||||||| |||||||||| ||| |        |||||||||||||||||||    
T  5098717 ggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagtgcaattttggtattttaaaatttttttaagaaaatttgggtgt 5098816  T
Q  270 aaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    ||||       |||| ||||||||||||||||||||    
T  5098817 aaccagaaaaacatggggtgtaaatagaaaaactct 5098852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 15506410 - 15506478
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||||| |||||||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  15506410 agaagaagaaattcaattacttatatgcaatagagtatgaatgaaagatgttttgattcactctttaat 15506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 22847675 - 22847743
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  22847675 agaagaataaattcacttatttatatgcaatcgagtatgaatgaaatatattttgattcactctttaat 22847743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 37829595 - 37829663
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||||||||||| |||||| || |||||||||||||||||||    
T  37829595 agaagaaaaaattcacttatttatatgcaattgagtatgaatgaaagatgttttgattcactctttaat 37829663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 48774 - 48707
Alignment:
Q  40 gaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  48774 gaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 48707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 48991107 - 48991215
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||||||||||| |||||| |  ||||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  48991107 agaagaaaaaattcacttatttatatgcaattgagtatgaatgaaagacgttttgattcactctttaatcttacatagagatt--aattgaacatcaaga 48991204  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  48991205 ttgtttgatcg 48991215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 3025742 - 3025660
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagatt 120  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| |||||| ||||||    
T  3025742 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagatt 3025660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 1523523 - 1523591
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  1523523 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 1523591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 20292751 - 20292683
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  20292751 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 20292683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 30215233 - 30215165
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  30215233 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 30215165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 36852395 - 36852463
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  36852395 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 36852463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 40430968 - 40431036
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  40430968 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 40431036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 43457731 - 43457663
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  43457731 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 43457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 41201784 - 41201676
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||| |||||| || ||| ||||||   ||||||||||| ||    
T  41201784 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactttttaatcttccatagagatt--aattgaacatcagaa 41201687  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  41201686 ttgtttgatcg 41201676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 24897537 - 24897578
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  24897537 caatcgagtatggatgaaaaatattttgattcactctttaat 24897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 1536807 - 1536863
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||| |||| |||||||||||||| || |||| ||||||||||||||    
T  1536807 tcacttacttatatgcaatagagtatggatgaaagatgttttaattcactctttaat 1536863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 10480745 - 10480685
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  10480745 aaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 10480685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 11691554 - 11691622
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||| ||||||||||||||    
T  11691554 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaatatgtttttattcactctttaat 11691622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 13961810 - 13961742
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  13961810 agaagaaaaaattcatttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 13961742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 32933350 - 32933418
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||||||| || |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  32933350 agaagaaaaaattcacatatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 32933418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 34160055 - 34160123
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||| | |||||| || |||||||||||||||||||    
T  34160055 agaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatgttttgattcactctttaat 34160123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 35339067 - 35338999
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| | ||||| |||||| || |||||||||||||||||||    
T  35339067 agaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaacatgttttgattcactctttaat 35338999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 47466885 - 47466817
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||| ||||||||||    
T  47466885 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaat 47466817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 50469725 - 50469793
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| ||||||  ||| ||||||| |||||| || |||||||||||||||||||    
T  50469725 agaagaaaaaattcacttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaat 50469793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 51323215 - 51323283
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  51323215 agaagaaaaaaatcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 51323283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 31710531 - 31710618
Alignment:
Q  217 atataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  31710531 atataaaagggcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 31710618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 7318858 - 7318926
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||| |||| ||||||    
T  7318858 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactttttaat 7318926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 7818291 - 7818359
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||| ||||||||| |||||||||| || | |||||| ||||||| || ||| |||||||||||||||    
T  7818291 agaaggagaaattcaattacttatatgcattagagtatagatgaaagatgtttcgattcactctttaat 7818359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 3027170 - 3027230
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||| ||||||||||| |||||| ||||  |||||| |||||| || |||||||||||    
T  3027170 agaagaaaaaattcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcac 3027230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 8713852 - 8713888
Alignment:
Q  71 gagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||| || |||||||||||||||||||    
T  8713852 gagtatggatgaaagatgttttgattcactctttaat 8713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 37682699 - 37682626
Alignment:
Q  74 tatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aattgtttgatcg 147  Q
    ||||||||||| || |||| |||||||||||||| || ||| |||||||  ||||||||||| |||||||||||||    
T  37682699 tatggatgaaagatgttttaattcactctttaatcttccatagagattg--attgaacatcagaattgtttgatcg 37682626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 43621073 - 43621014
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| || |||| |||||| || |||||||||||||||||||    
T  43621073 aaattcacttatttatatgcaatcgaatatg-atgaaagatgttttgattcactctttaat 43621014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 47429157 - 47429097
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| || ||| |||| || |||| |||||| || |||||||||||||||||||    
T  47429157 aaattcacttatttttatgcaatcgaatatgaatgaaagatgttttgattcactctttaat 47429097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 37094586 - 37094886
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37094586 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 37094685  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37094686 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattaaggtt 37094785  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||| |||||||||||||||    
T  37094786 ttaagaaaatttatataaaagggcaattttggtattataaaacaaatttaagaaaatttgggtgtaaccagaaaaacatggggtataaatagaaaaactc 37094885  T
Q  305 t 305  Q
    |    
T  37094886 t 37094886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 312
Target Start/End: Original strand, 21658443 - 21658749
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658443 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 21658542  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||    
T  21658543 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgtggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 21658642  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  21658643 ttaagaaaaattatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 21658741  T
Q  305 tcattctt 312  Q
    | ||||||    
T  21658742 ttattctt 21658749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 25852949 - 25852649
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25852949 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttacatccaattgagtatggatgaaaaatattttgattcactcttt 25852850  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  25852849 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagagtgaaactcactgacaatgaataaaattagggtt 25852750  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  25852749 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 25852650  T
Q  305 t 305  Q
    |    
T  25852649 t 25852649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 42343484 - 42343782
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42343484 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 42343583  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  42343584 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 42343683  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       ||| ||||||||||||||||||||    
T  42343684 ttaagaaaaatgatataaaagggcaattttggtattataaaaaaa--ttaagaaaatttgggtgtaaccagaaaaacataaggtgtaaatagaaaaactc 42343781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 2390230 - 2389931
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390230 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 2390131  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||    
T  2390130 aatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgtggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 2390031  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  2390030 ttaagaaaaattatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 2389932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 3178759 - 3179062
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3178759 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 3178858  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  3178859 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgttttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 3178958  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||         |||| ||||||||| |||||||       |||| |||||||||||||||    
T  3178959 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaataaaatttggatgtaaccagaaaaacatggggtgtaaatagaaaa 3179058  T
Q  301 actc 304  Q
    ||||    
T  3179059 actc 3179062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 1520738 - 1521009
Alignment:
Q  2 cagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactc 101  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1520738 cagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactc 1520837  T
Q  102 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagg 201  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||    
T  1520838 tttaattttcatggagattgatattgaacatcaaattgtatgatcgatcgctttgtggggtgaaagagggtgaaactcactaacaatgaataaaattagg 1520937  T
Q  202 gttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    |||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||    
T  1520938 gttttaagaaaatttatataaaaggacaattttggtattataaaaaaaatttaagaaaatttgggtgtaacc 1521009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 39697375 - 39697075
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39697375 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 39697276  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  39697275 aattttcatggagattgatattgaacatcaaattgtttgattgatcgctttgtggggtgaaagagggtaaaactcaccgacaatgaataaaattagggtt 39697176  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||| | ||||||||| |||||        ||||||||||||||| |||||||        |||||||||||||||||||||||    
T  39697175 ttaagaaaatttatataaaatgacaattttggtattataaaaaaaatttaagaaaatttggatgtaaccagaaaaatatgaggtgtaaatagaaaaactc 39697076  T
Q  305 t 305  Q
    |    
T  39697075 t 39697075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 13195750 - 13195451
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13195750 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 13195651  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13195650 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 13195551  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||||| |||||||| |||||         |||||||||||| |||||||||       |||| |||||||||| ||||||||    
T  13195550 ttaagaaaatttatataaaagggaaattttggtattataaaaaaaaattaagaaaatttaggtgtaaccagaaaaacatggggtgtaaataaaaaaactc 13195451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 43577455 - 43577692
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577455 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 43577554  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  43577555 aatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 43577654  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        |||||||||||||||||||| |||||    
T  43577655 ttaagaaaatttatataaaagggcaattttggtattat 43577692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 1482385 - 1482592
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1482385 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 1482484  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||||    
T  1482485 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaattcactgacaatgaataaaattag 1482584  T
Q  201 ggttttaa 208  Q
    ||||||||    
T  1482585 ggttttaa 1482592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 40811285 - 40811048
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811285 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 40811186  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||| ||||    
T  40811185 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaataaataaaattatggtt 40811086  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        |||||||||||||||||||| |||||    
T  40811085 ttaagaaaatttatataaaagggcaattttggtattat 40811048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 44143932 - 44144233
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44143932 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 44144031  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||||||||  ||||||||||||||||||||||    
T  44144032 aatttttatggagattgatatcgaacatcaaattgtttgatcgatcgccttgtggggtgaaagagggtgaaactcattgacaatgaataaaattagggtt 44144131  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat-nnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    ||||        |||||||||||||||||||| |||||         ||||||||||||| |||||||||       |||| ||||||||||||||||||    
T  44144132 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaaatttaagaaaatttaggtgtaaccagaaaaacatggggtgtaaatagaaaaact 44144231  T
Q  304 ct 305  Q
    ||    
T  44144232 ct 44144233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 34202827 - 34203126
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34202827 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactcttt 34202926  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||||||||||||    
T  34202927 aattttcatggagattgatattaaacatcaaattgtttgatcgatcgctttgtgggatgaaagagggtgaaactcactgacaatgaataaaattagggtt 34203026  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||||| |||||| | |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  34203027 ttaagaaaatttatataaaagggaaattttagtattataaaaaaaa-ttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 34203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 58 - 305
Target Start/End: Original strand, 35896331 - 35896578
Alignment:
Q  58 cttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35896331 cttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgt 35896430  T
Q  158 ggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaaga 257  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        |||||||    
T  35896431 ggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaaga 35896530  T
Q  258 aaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
    ||||||||||||||||       |||| ||||||||||||||||||||    
T  35896531 aaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 35896578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 27980503 - 27980312
Alignment:
Q  3 agtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 102  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27980503 agtgcagttgaaggaaaaaaattgaaactaacaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactct 27980404  T
Q  103 ttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||||| || |||||||||    
T  27980403 ttaattttcatggagattgatattgaacatcaaattgtttgatccatcgctttgtgggatgaaagagggtgaaactcactgagaatgaataa 27980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 10639256 - 10639558
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10639256 tcagtgcagttgaaggaaaaaa-ttgaaacttgcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 10639354  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||||||  ||||||||||||||||  ||||||||||||||||    
T  10639355 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgtgatcgc-ttgtggggt-gaagagggtgaaactcagtgacaatgaataaaatt 10639452  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||| ||||||||| |||||        ||||||||||||| | |||||||       ||||  ||||||||||||    
T  10639453 agggttttaagaaaatttatataaaaggacaattttggtattataaaaaacttttaagaaaatttagatgtaaccagaaaaacatggagtgtaaatagaa 10639552  T
Q  299 aaactc 304  Q
    ||||||    
T  10639553 aaactc 10639558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 28067031 - 28066842
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  28067031 tgcagttgaagaaaaaaaattgaaactaacaaatagaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcaatcttt 28066932  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataa 194  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||||| || |||||||||    
T  28066931 aattttcatggagattgatattgaacatcaaattgtttgatccatcgctttgtgggatgaaagagggtgaaactcactgagaatgaataa 28066842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 304
Target Start/End: Original strand, 927590 - 927819
Alignment:
Q  74 tatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  927590 tatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatagatcgctttgtggggtaaaagagggtg 927689  T
Q  174 aaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    |||||||  ||||||||||||||||||||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||    
T  927690 aaactcattgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaa-ttaagaaaatttgggtgtaacc 927788  T
Q  274 nnnnnnncatgaggtgtaaatagaaaaactc 304  Q
           |||| |||||||||||||||||||    
T  927789 agaaaaacatggggtgtaaatagaaaaactc 927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 102 - 305
Target Start/End: Complemental strand, 32551077 - 32550874
Alignment:
Q  102 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  32551077 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagg 32550978  T
Q  202 gttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaa 301  Q
    |||||||        |||||||| ||||||||||| |||||        |||||||||||||||||||||||        ||| ||||||||||||||||    
T  32550977 gttttaagaaaatttatataaaaaggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaaaaa 32550878  T
Q  302 ctct 305  Q
    ||||    
T  32550877 ctct 32550874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 4330966 - 4330898
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  4330966 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 4330898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 26171761 - 26171829
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  26171761 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaat 26171829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 927539 - 927591
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcactta 57  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  927539 tgcagttgaaggaaaaaaatcgaaactagcaaatagaagaagaaattcactta 927591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 4072826 - 4072758
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||||||| || |||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  4072826 agaagaaaaaattcacctatttatatacaatcgagtatgaatgaaagatattttgattcactctttaat 4072758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 8034197 - 8034129
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  8034197 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 8034129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 10522271 - 10522339
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  10522271 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 10522339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 38628501 - 38628433
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  38628501 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 38628433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 44456278 - 44456210
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  44456278 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 44456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 7721970 - 7721862
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||  |||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  7721970 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatggtttgattcactctttaatcttccatagagatt--aattgaacatcaaga 7721873  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  7721872 ttgtttgatcg 7721862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 16313057 - 16312975
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagatt 120  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||| |||||||||||| |||||| ||||||    
T  16313057 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgactcactctttaatctttcatagagatt 16312975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 31639968 - 31639861
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||| ||||  |||||||| |||| |||||||||||||| || ||||||||||||||||||| || ||| |||||||  |||||||||||  |    
T  31639968 agaagaataaaatcacacacttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttccatagagattg--attgaacatcagga 31639871  T
Q  137 ttgtttgatc 146  Q
    ||||||||||    
T  31639870 ttgtttgatc 31639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 40658703 - 40658625
Alignment:
Q  69 ttgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aattgtttgatcg 147  Q
    |||||||||||||||| |||||||||||||||||||||| || ||| |||||||  |||||||||||  ||||||||||||    
T  40658703 ttgagtatggatgaaagatattttgattcactctttaatcttccatagagattg--attgaacatcaggattgtttgatcg 40658625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 31569127 - 31569055
Alignment:
Q  34 taaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| ||||||| ||||||||||| |||||| | || ||||||| |||||| || |||||||||||||||||||    
T  31569127 taaaaagaagaa-aaattcacttatttatatgcgatcgagtatgaatgaaagatgttttgattcactctttaat 31569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 13479894 - 13479834
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||| ||||||| |||||| || ||| |||||||||||||||    
T  13479894 aaattcacttatttatatgcaatcgagtatgaatgaaagatgtttggattcactctttaat 13479834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 45443064 - 45443028
Alignment:
Q  71 gagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45443064 gagtatggatgaaaaatgttttgattcactctttaat 45443028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 43653144 - 43653066
Alignment:
Q  46 gaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    ||||||||||||| ||| | |||| || ||||||||||| |  |||| |||||||||||||| |||||| |||||||||    
T  43653144 gaaattcacttacctatttgcaatagactatggatgaaagacgttttaattcactctttaatctttcattgagattgat 43653066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 35006299 - 35006372
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    |||||||||||||| |||| || ||| ||||||| || ||||||||||||||| ||| ||| || |||||||||    
T  35006299 tcacttacttatatgcaatcgaatatagatgaaagatgttttgattcactcttcaatcttctatagagattgat 35006372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 44799334 - 44799367
Alignment:
Q  74 tatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||||||||||||||||||||||||||    
T  44799334 tatgaatgaaaaatattttgattcactctttaat 44799367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 33967438 - 33967741
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33967438 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatggaaaatattttgattcact 33967537  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  33967538 ctttaattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 33967637  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  33967638 ggttttaagaaaatttatataaaagggcaattttggtattataatttttttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 33967737  T
Q  301 actc 304  Q
    ||||    
T  33967738 actc 33967741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 10840957 - 10840658
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10840957 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 10840859  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  10840858 aattttcatggagattgatattgaacaccaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaattcactgacaatgaataaaattagggtt 10840759  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  10840758 ttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaaactc 10840659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 22781373 - 22781074
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22781373 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttatttatatccaattgagtatggatgaaaaatattttgattcactcttt 22781274  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  22781273 aatttttatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 22781174  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||| |||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  22781173 ttaagaaaatttatataaaagagcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 22781074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 32236819 - 32237122
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32236819 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaactgagtatggatgaaaaatattttgattcact 32236918  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||| |||||||||||||| |||    
T  32236919 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgttttgaggggtgaaagagggtgaaactcactgacaatgaataaaagtag 32237018  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  32237019 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagacaaacatggggtgtaaatagaaaa 32237118  T
Q  301 actc 304  Q
    ||||    
T  32237119 actc 32237122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 33712247 - 33711948
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33712247 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 33712148  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  33712147 aattttcatggagattgatattgaacatcaaattgtttgatcgatcactttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 33712048  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||  |||||||||||||||||||    
T  33712047 ttaagaatatttatataaaagggcaattttggtattat-aaaaaaatttaagaaaatttgggtgtaaccagaaaaacatagggtgtaaatagaaaaactc 33711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 38871648 - 38871947
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871648 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 38871747  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  38871748 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 38871847  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||  |||||        ||||||||||||||| |||||||        ||| |||||||||||||||||||    
T  38871848 ttaagaaaatttatataaaagggcaattttgatattataaaaattttttaagaaaatttggatgtaaccaaaaaaatatggggtgtaaatagaaaaactc 38871947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 20835078 - 20834845
Alignment:
Q  2 cagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactc 101  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835078 cagtgcagttaaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactc 20834979  T
Q  102 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  20834978 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagg 20834879  T
Q  202 gttttaaannnnnnnatataaaagggcaattttg 235  Q
    |||||||        |||||||||||||||||||    
T  20834878 gttttaagaaaatttatataaaagggcaattttg 20834845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 41070407 - 41070707
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaatt-gagtatggatgaaaaatattttgattcactctt 103  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41070407 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaatttgagtatggatgaaaaatattttgattcactctt 41070505  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||    
T  41070506 taattttcatggagattgatattgaacaccaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaattcactgacaatgaataaaattagggt 41070605  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    |||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||||    
T  41070606 tttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaaact 41070705  T
Q  304 ct 305  Q
    ||    
T  41070706 ct 41070707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 37971242 - 37970938
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  37971242 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaaattgattcac 37971143  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  37971142 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 37971043  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    |||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| ||||||||||||||    
T  37971042 gggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 37970943  T
Q  300 aactc 304  Q
    |||||    
T  37970942 aactc 37970938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 4515569 - 4515366
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4515569 tgcagttgaaggaaaagaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 4515470  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4515469 aattttcatggagattgatattgaacatcaaattgtttgatcaatcgctttgtggggtaaaagagggtgaaactcactgacaatgaataaaattagggtt 4515370  T
Q  205 ttaa 208  Q
    ||||    
T  4515369 ttaa 4515366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 24395718 - 24395989
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395718 tcagtgcagttgaaggataaaaattgaaactagcaaatagaagaaaaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 24395817  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| | ||||||||||||||||    
T  24395818 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcactttgtggggtgaaagagggtgaaactcactgtcaatgaataaaattag 24395917  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaac 272  Q
    ||||||||        ||||| |||||||||||||| |||||        ||||||||||||||||||||||    
T  24395918 ggttttaagaaaatttatatataagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaac 24395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 36430839 - 36431138
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaatt-gagtatggatgaaaaatattttgattcactctt 103  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36430839 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaatttgagtatggatgaaaaatattttgattcactctt 36430937  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||||||||    
T  36430938 taattttcatggagattgatattgaacaccaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaattcactgacaatgaataaaattagggt 36431037  T
Q  204 tttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
    |||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||||    
T  36431038 tttaagaaaatttatataaaaggacaattttggtattataaaaaaaatttaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaaact 36431137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 4044340 - 4044042
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  4044340 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatatttgaattcactcttt 4044242  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||   ||||| ||||||||||||||    
T  4044241 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgttttgtggggtgaaagagggtgaaactcactaccaatggataaaattagggtt 4044142  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    |||||       |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  4044141 ttaaaaaaaattatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 4044042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 20656822 - 20656519
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  20656822 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaactgagtatggatgaaaaatattttgatttact 20656723  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||| |||||||||||||||||| |||||||||||||| |||    
T  20656722 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatttctttgaggggtgaaagagggtgaaactcactgacaatgaataaaagtag 20656623  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||| ||||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  20656622 ggttttaagaaaatttatataaaaggacaattttgatattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 20656523  T
Q  301 actc 304  Q
    ||||    
T  20656522 actc 20656519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 7149535 - 7149232
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  7149535 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttagatccaattgagtagggatgaaaaatattttgattcact 7149436  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggg---gtaaaagagggtgaaactcaccgacaatgaataaaat 197  Q
    ||||||||| ||||||||||||||||||||||||||   |||||||||| ||||| ||||   | || |||||||||||||||| |||||||||||||||    
T  7149435 ctttaatttccatggagattgatattgaacatcaaa---tttgatcgatggctttgtgggggtgaaagagagggtgaaactcactgacaatgaataaaat 7149339  T
Q  198 tagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaataga 297  Q
    |||||||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||    
T  7149338 tagggttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaataga 7149239  T
Q  298 aaaactc 304  Q
    |||||||    
T  7149238 aaaactc 7149232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 40585692 - 40585389
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40585692 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaagaatattttgattcact 40585593  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  40585592 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 40585494  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||| | ||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||| ||    
T  40585493 agggttttaagaaaatttatataaaa-gacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaataaaa 40585395  T
Q  299 aaactc 304  Q
    ||||||    
T  40585394 aaactc 40585389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10999320 - 10999078
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10999320 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 10999221  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  10999220 ctttaattttcatggagattgatattgaacattaaattgtttgatcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 10999122  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||||||||        | |||||||||||||||||| |||||    
T  10999121 agggttttaagaaaatttacataaaagggcaattttggtattat 10999078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 53974805 - 53975092
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53974805 tgcagttgaaggaaaaaaattgaaactagaaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 53974904  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||          ||||||||||||| ||||||||||||||||||||||    
T  53974905 aattttcatggagattgatattaaacatcaaattgtttgatcgatcgctttgtg----------gggtgaaactcactgacaatgaataaaattagggtt 53974994  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||| |||||         |||||||||||||| |||||||       |||| |||||||||||||||||||    
T  53974995 ttaagaaaatttatataaaagggcaattttggtattataaaaaaa--ttaagaaaatttggatgtaaccagaaaaacatggggtgtaaatagaaaaactc 53975092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 20048827 - 20049132
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  20048827 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatattttcattcact 20048926  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  20048927 ctttaattttcatggagattgatattgaacatcaaattgtttgttcgtgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 20049025  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaa 298  Q
    ||||||||||        |||||||||  ||||||||| |||||        |||||||||||||||||||||||        ||| |||||||||||||    
T  20049026 agggttttaagaaaatttatataaaagaacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaa 20049125  T
Q  299 aaactct 305  Q
    |||||||    
T  20049126 aaactct 20049132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 26090874 - 26091165
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26090874 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagatattcatttacttatatccaattgagtatggatgaaaaatattttgattcact 26090973  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     || |||||| ||||||||||||||||    ||||||||||||||||     
T  26090974 ctttaattttcatggagattgatattgaacatcaaattgtttgatcga-----ttgtggggtgaaagagggtgaaactc----acaatgaataaaattaa 26091064  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||       |||| |||||||||||||||    
T  26091065 ggttttaagaaaatttatataaaaggacaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 26091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 301
Target Start/End: Original strand, 672609 - 672883
Alignment:
Q  18 aaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggag 117  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  672609 aaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcatggag 672708  T
Q  118 attgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnna 217  Q
    |||||||||||||||||||||||||||||||     || |||||| ||||||||||||||||    |||||||||||||||||||||||||        |    
T  672709 attgatattgaacatcaaattgtttgatcga-----ttgtggggtgaaagagggtgaaactc----acaatgaataaaattagggttttaagaaaattta 672799  T
Q  218 tataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaa 301  Q
    ||||||||||||||||||| |||||        ||||||||||||| |||||||||       |||| ||||||||||||||||    
T  672800 tataaaagggcaattttggtattataaaaaacttttaagaaaatttaggtgtaaccagaaaaacatggggtgtaaatagaaaaa 672883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 6267857 - 6267664
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6267857 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgaggatggatgaaaaatattttgattcactcttt 6267758  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||          ||||||||||||| ||||||||||||||||||||||    
T  6267757 aattttcatggagattgatattgaacatcaaattgtttgatcgatagctttgtg----------gggtgaaactcactgacaatgaataaaattagggtt 6267668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 63 - 273
Target Start/End: Original strand, 25711509 - 25711719
Alignment:
Q  63 atccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25711509 atccaattgagtatggatgaaaaatattttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggt 25711608  T
Q  163 aaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatt 262  Q
     |||||||||||||||||| ||||||||||||||||||||||||||        |||||||| || |||||||| |||||        ||||||||||||    
T  25711609 gaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaaaggtaattttggtattataaaaaaattttaagaaaatt 25711708  T
Q  263 tgggtgtaacc 273  Q
    |||||||||||    
T  25711709 tgggtgtaacc 25711719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 85171 - 85319
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  85171 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 85270  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  85271 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 85319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7678937 - 7678789
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7678937 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 7678838  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7678837 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 7678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 8947322 - 8947254
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||||||||||||||| | || |||||||||||||| || |||||||||||||||||||    
T  8947322 agaagaagaaattcacttacttatatgctatcgagtatggatgaaagatgttttgattcactctttaat 8947254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 2612685 - 2612613
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc 111  Q
    ||||||| ||| ||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  2612685 agaagaaaaaaatcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaattttc 2612613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 35155140 - 35155072
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  35155140 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaat 35155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 35233097 - 35233029
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||||||||    
T  35233097 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaat 35233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 48585350 - 48585418
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||| || |||||||||||||||||||    
T  48585350 agaagaaaaaattcacttatttatatgcaatcgagtatggatgaaagatgttttgattcactctttaat 48585418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 24200184 - 24200282
Alignment:
Q  49 attcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgatattgaacatcaa-attgtttgatc 146  Q
    ||||||||| |||||| |||||||||||  |||||| |||||||||||||||||||||| ||| || ||||||   |||||||||||| |||||||||||    
T  24200184 attcacttatttatatgcaattgagtataaatgaaagatattttgattcactctttaatcttcgatagagatt--aattgaacatcaagattgtttgatc 24200281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 54556815 - 54556876
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||| |||||| ||||||||    
T  54556815 agaagaagaaattcatttacttatatgcaatcgagtatggatgaaagatatttggattcact 54556876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 14279576 - 14279644
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  14279576 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 14279644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 23483155 - 23483223
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||||| ||| |||||| |||| ||||||||| |||| || |||||||||||||||||||    
T  23483155 agaagaagaaattcaattatttatatgcaatagagtatggacgaaagatgttttgattcactctttaat 23483223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 28411972 - 28412040
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  28411972 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 28412040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 36232014 - 36231946
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  36232014 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 36231946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 44353751 - 44353683
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  44353751 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 44353683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 19942306 - 19942372
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  19942306 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 19942372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 52343507 - 52343581
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagatt 120  Q
    ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| |||||| ||||||    
T  52343507 aaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagatt 52343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 31608217 - 31608302
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||| ||  ||||||| | |||||||| ||| || |||||||||    
T  31608217 agaagaagaaattcacttacttatatgcaataaagtatggatgaaagatgctttgatttattctttaatcttctatagagattgat 31608302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 49779227 - 49779159
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||| ||||||||||    
T  49779227 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaat 49779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 39626349 - 39626282
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaa 106  Q
    |||||| ||||||||||| ||||||| |||| ||||||| |||||| || |||| |||||||||||||    
T  39626349 agaagacgaaattcacttgcttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaa 39626282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 30419409 - 30419475
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||| ||||||    
T  30419409 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactttttaat 30419475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 47097744 - 47097678
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||||| |||||||||| ||||  |||||||||||||  | |||||||||| ||||||||    
T  47097744 aagaagaaattcatttacttatatgcaatcaagtatggatgaaaggtgttttgattcattctttaat 47097678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 33393141 - 33393182
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  33393141 caatcgagtatggatgaaaaatgttttgattcactctttaat 33393182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 4595910 - 4595842
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| | ||||||||| |||||| |||| ||||||| ||| || || |||||||||||||||||||    
T  4595910 agaagaaaagattcacttatttatatgcaatcgagtatgaatggaagatgttttgattcactctttaat 4595842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 36840072 - 36840012
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  36840072 aaatccacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 36840012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 41589437 - 41589513
Alignment:
Q  71 gagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aattgtttgatcg 147  Q
    |||||||||||||| || ||||||||||||||||||| || ||| |||||||  |||||||||||  ||||||||||||    
T  41589437 gagtatggatgaaagatgttttgattcactctttaatcttccatagagattg--attgaacatcaggattgtttgatcg 41589513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 7680565 - 7680517
Alignment:
Q  59 ttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  7680565 ttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 7680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 38144592 - 38144536
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||||| |||| ||||||| |||||| || |||| ||||||||||||||    
T  38144592 tcacttatttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaat 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 52813686 - 52813722
Alignment:
Q  71 gagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  52813686 gagtatgaatgaaagatattttgattcactctttaat 52813722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 24822284 - 24821984
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24822284 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 24822185  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  24822184 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggcgaaagagggtgaaactcaccgacaatgaataaaattagggtt 24822085  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||        ||| |||||||||||||||||||    
T  24822084 ttaagaaaatttatataaaagggcaattttgatattataaattttttttaagaaaatttgggtgtaaccagaaaaatatggggtgtaaatagaaaaactc 24821985  T
Q  305 t 305  Q
    |    
T  24821984 t 24821984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 17602166 - 17602471
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17602166 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcact 17602265  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttat-ggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||    
T  17602266 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtgggggtgaaagagggtgaaactcactgacaatgaataaaatta 17602365  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    |||||||||        |||||||||||||||||| | |||||        |||||||||||||||||||||||       |||| ||||||||||||||    
T  17602366 gggttttaagaaaatttatataaaagggcaattttagtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 17602465  T
Q  300 aactct 305  Q
    ||||||    
T  17602466 aactct 17602471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 39365806 - 39366074
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39365806 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 39365905  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39365906 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 39366005  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    ||||        |||||||||||||||||| | |||||        |||||||||||||||||||||||    
T  39366006 ttaagaaaatttatataaaagggcaattttagtattataaaaaaattttaagaaaatttgggtgtaacc 39366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 15840312 - 15840617
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15840312 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatattcaattgagtatggatgaaaaatattttgattcac 15840411  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  15840412 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 15840511  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    |||||||||        ||||||||  |||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||    
T  15840512 gggttttaagaaaatttatataaaaaagcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 15840611  T
Q  300 aactct 305  Q
    ||||||    
T  15840612 aactct 15840617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 37578742 - 37579047
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  37578742 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatattcaatcgagtatggatgaaaaatattttgattcac 37578841  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  37578842 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 37578941  T
Q  200 gggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaa 299  Q
    | |||||||        |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||    
T  37578942 gagttttaagaaaatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaa 37579041  T
Q  300 aactct 305  Q
    ||||||    
T  37579042 aactct 37579047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 26290333 - 26290029
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  26290333 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttact 26290234  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  26290233 ctttaattttcatggagattgatattgaacatcagattgtttgatcgatctctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 26290134  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||    
T  26290133 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 26290034  T
Q  301 actct 305  Q
    |||||    
T  26290033 actct 26290029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 26303590 - 26303286
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  26303590 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttact 26303491  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  26303490 ctttaattttcatggagattgatattgaacatcagattgtttgatcgatctctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 26303391  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||    
T  26303390 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 26303291  T
Q  301 actct 305  Q
    |||||    
T  26303290 actct 26303286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 26315584 - 26315280
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  26315584 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttact 26315485  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  26315484 ctttaattttcatggagattgatattgaacatcagattgtttgatcgatctctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 26315385  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||    
T  26315384 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 26315285  T
Q  301 actct 305  Q
    |||||    
T  26315284 actct 26315280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 304
Target Start/End: Complemental strand, 43663901 - 43663602
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43663901 tgcagttgaaggaaaaaaattgaaactagcaaatataagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactcttt 43663802  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  43663801 aattttcatggagattgatattaaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcaccgacaatgaataaaattagggtt 43663702  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||| |||||||||  |||||        |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  43663701 ttaagaaaatttatataaaagagcaattttgatattataaaaaaattttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 43663602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 3032494 - 3032194
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3032494 tgcagttgaaggaaaaaaattgaaactatcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 3032395  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| |||    
T  3032394 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagagtt 3032295  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||        ||||||||||||| |||||| |||||         |||||||||||||||| |||||       |||| |||||||||||||||||||    
T  3032294 ttaagaaaatttatataaaagggcagttttggtattataaaaaaaaattaagaaaatttgggtataaccagaaaaacatggggtgtaaatagaaaaactc 3032195  T
Q  305 t 305  Q
    |    
T  3032194 t 3032194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 8376743 - 8376973
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376743 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 8376842  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||||||||    
T  8376843 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcgctgacaatgaataaaattagggtt 8376942  T
Q  205 ttaaannnnnnnatataaaagggcaattttg 235  Q
    ||||        |||||||||||||||||||    
T  8376943 ttaagaaaatttatataaaagggcaattttg 8376973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 5599447 - 5599145
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5599447 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttatttatatccaattgagtatggatgaaaaatattttgattcact 5599348  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  5599347 atttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 5599248  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        ||||||||||  |||||||| |||||        |||||||||||||| || |||||       |||| |||||||||||||||    
T  5599247 ggttttaagaaaatttatataaaaggataattttggtattataaaaaacttttaagaaaatttgagtataaccagaaaaacatggggtgtaaatagaaaa 5599148  T
Q  301 act 303  Q
    |||    
T  5599147 act 5599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 34564618 - 34564383
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34564618 tcagtgcagttgaaggaaaaaaattgaaactaacaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 34564519  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  34564518 ctttaattttcatggagattgatattgaatatcaaattgtttgatcgatccctttatggggtgaaagagggtgaaactcattgacaatgaataaaattag 34564419  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttgg 236  Q
    ||||||||        ||||||||||||||||||||    
T  34564418 ggttttaagaaaatttatataaaagggcaattttgg 34564383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 242
Target Start/End: Original strand, 35605864 - 35606100
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35605864 tgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 35605962  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||    
T  35605963 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtgaaagagggtgaaattcactgacaatgaataaaattaaggtt 35606062  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||        ||||||||||| |||||||| |||||    
T  35606063 ttaagaaaatttatataaaaggggaattttggtattat 35606100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 26122166 - 26121958
Alignment:
Q  1 tcagtgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcac 99  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26122166 tcagtgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcac 26122067  T
Q  100 tctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatta 199  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  26122066 tttttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaatta 26121967  T
Q  200 gggttttaa 208  Q
    |||||||||    
T  26121966 gggttttaa 26121958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 42512707 - 42512910
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42512707 tgcagttgaaggaaagaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactcttt 42512806  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||| |||    
T  42512807 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaatagggtgaaactcactgacaatgaataaaattagagtt 42512906  T
Q  205 ttaa 208  Q
    ||||    
T  42512907 ttaa 42512910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 3136798 - 3136525
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3136798 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 3136699  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  3136698 ctttaattttcatggagattgatattgaacatcaaattgtttgctcatgatcgc-ttgtggggtgaaagagggtgaaactcagtgacaatgaataaaatt 3136600  T
Q  199 agggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaacc 273  Q
    ||||||||||        |||||||||||||||||||  |||||        |||||||||||||||||||||||    
T  3136599 agggttttaagaaaatttatataaaagggcaattttgatattataaaaaacttttaagaaaatttgggtgtaacc 3136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5988669 - 5988877
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5988669 tcagtgcagttgaaggaaaaaaattgaaacttgcaaatagaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcact 5988768  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatc--gatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||||||||||  ||||||||||||||||    
T  5988769 ctttaattttcatggagattgatattgaacatcaaattgtttgctcgtgatcgc-ttgtggggtgaaagagggtgaaactcaatgacaatgaataaaatt 5988867  T
Q  199 agggttttaa 208  Q
    ||||||||||    
T  5988868 agggttttaa 5988877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28884962 - 28884814
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28884962 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 28884863  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28884862 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 28884814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28910495 - 28910642
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28910495 tcagtgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 28910593  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28910594 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 28910642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 16634011 - 16633891
Alignment:
Q  89 ttttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  16634011 ttttgattcactctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaat 16633912  T
Q  189 gaataaaattagggttttaaa 209  Q
    |||||||||||||||||||||    
T  16633911 gaataaaattagggttttaaa 16633891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 102 - 304
Target Start/End: Original strand, 34918057 - 34918259
Alignment:
Q  102 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  34918057 tttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagg 34918156  T
Q  202 gttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaa 301  Q
    |||||||        |||||||||| ||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||    
T  34918157 gttttaagaaaatttatataaaaggacaattttggtattataaaaaaattttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaa 34918256  T
Q  302 ctc 304  Q
    |||    
T  34918257 ctc 34918259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 112 - 305
Target Start/End: Original strand, 11588731 - 11588924
Alignment:
Q  112 atggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaann 211  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||       
T  11588731 atggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaa 11588830  T
Q  212 nnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactct 305  Q
         |||||||||||||||||||| |||||        |||||||||||||||||||||||       |||| ||||||||||||||||||||    
T  11588831 aatttatataaaagggcaattttggtattataaaaaacttttaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactct 11588924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23356811 - 23356715
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 98  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23356811 tcagtgcagttgaaggaaaaaa-ttgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 23356715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 303
Target Start/End: Original strand, 5635955 - 5636130
Alignment:
Q  128 aacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaaggg 227  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||     
T  5635955 aacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggttttaagaaaatttatataaaagga 5636054  T
Q  228 caattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaact 303  Q
     |||||||| |||||        |||||||||||||| || |||||       |||| ||||||||||||||||||    
T  5636055 taattttggtattataaaaaacttttaagaaaatttgagtataaccagaaaaacatggggtgtaaatagaaaaact 5636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 23356714 - 23356615
Alignment:
Q  143 gatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattat 242  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||        |||||||||||||||||||| |||||    
T  23356714 gatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaaggttttaagaaaatttatataaaagggcaattttggtattat 23356615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 304
Target Start/End: Complemental strand, 26294550 - 26294410
Alignment:
Q  164 aaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaattt 263  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        |||||||||||||    
T  26294550 aaagatggtgaaactcagtgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaattt 26294451  T
Q  264 gggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||||||||       |||| |||||||||||||||||||    
T  26294450 gggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 26294410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 304
Target Start/End: Complemental strand, 26307807 - 26307667
Alignment:
Q  164 aaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaattt 263  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||        |||||||||||||||||||| |||||        |||||||||||||    
T  26307807 aaagatggtgaaactcagtgacaatgaataaaattagggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaatttaagaaaattt 26307708  T
Q  264 gggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||||||||       |||| |||||||||||||||||||    
T  26307707 gggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 26307667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 304
Target Start/End: Complemental strand, 12713535 - 12713389
Alignment:
Q  158 ggggtaaaagagggtgaaactcaccgacaatgaataaaattagggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaaga 257  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||        |||||||||| ||||||||  |||||        |||||||    
T  12713535 ggggtgaaagagggtgaaactcagtgacaatgaataaaattagggttttaagaaaatttatataaaaggacaattttgatattataaaaaacttttaaga 12713436  T
Q  258 aaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    ||||||||||||||||       |||| |||||||||||||||||||    
T  12713435 aaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaaactc 12713389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 44696228 - 44696336
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||||||||||| |||||||||| || |||||||| | ||||| || ||||||||||||||||||| || ||| |||||||  ||||||||||| ||    
T  44696228 agaagaagaaattcatttacttatatgcacttgagtatcggtgaaagatgttttgattcactctttaatcttccatagagattg--attgaacatcagaa 44696325  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  44696326 ttgtttgatcg 44696336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 7969477 - 7969366
Alignment:
Q  35 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatc 133  Q
    |||||||||||||||| ||| | ||||||| ||||  ||||||||||||| |  ||||||||||||||||||| || ||| |||||||  ||||||||||    
T  7969477 aaatagaagaagaaatacacctgcttatatgcaatcaagtatggatgaaagaagttttgattcactctttaatcttccatagagattg--attgaacatc 7969380  T
Q  134 aaattgtttgatcg 147  Q
    | ||||||||||||    
T  7969379 agattgtttgatcg 7969366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 40184587 - 40184656
Alignment:
Q  35 aaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||  | ||||||||||||||||    
T  40184587 aaatggaagaagaaattcacttacttatatgcaatcgagtatggatgaaagttgttttgattcactcttt 40184656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 4230055 - 4230163
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aa 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   ||||||||||| ||    
T  4230055 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcagaa 4230152  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  4230153 ttgtttgatcg 4230163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 38235102 - 38235210
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||| | |||||| |||||||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  38235102 agaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatattttgattcactctttaatcttccatagagatt--aattgaacatcaaga 38235199  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  38235200 ttgtttgatcg 38235210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 38946464 - 38946572
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||||| |    
T  38946464 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcaaga 38946561  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  38946562 ttgtttgatcg 38946572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 35979521 - 35979455
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||||||||||||||||||||||| |||   ||||||||||||| ||||||||||||| ||||||||    
T  35979521 aagaagaaattcacttacttatatgcaacatagtatggatgaaagatattttgattcagtctttaat 35979455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 4006433 - 4006501
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  4006433 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 4006501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 11266794 - 11266862
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  11266794 agaagaaaaaattcacttatttatatacaatcgagtatgaatgaaagatgttttgattcactctttaat 11266862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 12723096 - 12723164
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  12723096 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 12723164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 31793169 - 31793101
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  31793169 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 31793101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 38459470 - 38459402
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  38459470 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 38459402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 41941495 - 41941427
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  41941495 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 41941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 42687313 - 42687245
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  42687313 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 42687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 44026258 - 44026366
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaa-a 136  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || ||||||||||||| ||||| || ||| ||||||   |||||||||||| |    
T  44026258 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactccttaatcttccatagagatt--aattgaacatcaaga 44026355  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  44026356 ttgtttgatcg 44026366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 44953653 - 44953736
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgat 123  Q
    ||||||||||||||||||||||||||||| |||||||  |||||| |  ||||||| |||||||||| ||| || |||||||||    
T  44953653 aagaagaaattcacttacttatatccaatagagtatgagtgaaaagtgatttgatttactctttaatcttttatagagattgat 44953736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 7988205 - 7988098
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatcaaat 137  Q
    |||||||||||| ||||| ||||||| ||||  ||||||||||||| |  ||||||||||||||||||| || ||| |||||||  ||| || |||| ||    
T  7988205 agaagaagaaatacacttgcttatatgcaataaagtatggatgaaagaagttttgattcactctttaatcttccatagagattg--attaaatatcagat 7988108  T
Q  138 tgtttgatcg 147  Q
    ||||||||||    
T  7988107 tgtttgatcg 7988098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 5346984 - 5346943
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  5346984 caatcgagtatggatgaaaaatattttgattcactctttaat 5346943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 32911010 - 32911067
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 98  Q
    |||||||||||||||||||||||| |||| ||||||| |||||| || ||||||||||    
T  32911010 aagaagaaattcacttacttatatgcaatagagtatgaatgaaagatgttttgattca 32911067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 6248 - 6316
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||| ||||    
T  6248 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctgtaat 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 1848495 - 1848427
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| ||| |||||||||| ||||  ||||||||||||| || ||||||| |||||||||||    
T  1848495 agaagaagaaactcatttacttatatgcaatcaagtatggatgaaatatgttttgatccactctttaat 1848427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 28152060 - 28152134
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagatt 120  Q
    ||||||||||| |||||| |||| ||||||| |||||| || |||||| |||||||||||| |||||| ||||||    
T  28152060 aaattcacttatttatatgcaatcgagtatgaatgaaatatgttttgaatcactctttaatctttcatagagatt 28152134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 26992003 - 26991930
Alignment:
Q  51 tcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    |||||||||||||| |||||||||||| | |||| || ||||||||||||||| ||| ||| || |||||||||    
T  26992003 tcacttacttatatgcaattgagtatgaacgaaagatgttttgattcactcttcaatcttctatagagattgat 26991930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 44704165 - 44704097
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| | ||||| |||||| || ||||||||| |||||||||    
T  44704165 agaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaagatgttttgattcgctctttaat 44704097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 33771962 - 33772062
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatc-aaattgtttga 144  Q
    ||||||||||| |||||| |||||||||||| |||||| || |||||| ||||| ||| || || ||| ||||||   |||||||||| |||||||||||    
T  33771962 aaattcacttatttatatgcaattgagtatgaatgaaagatgttttgactcactatttgatcttccatagagatt--aattgaacatcaaaattgtttga 33772059  T
Q  145 tcg 147  Q
    |||    
T  33772060 tcg 33772062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 2827720 - 2827665
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgatt 96  Q
    ||||| |||||||||||| |||||   |||| ||||||||||||||||||||||||||    
T  2827720 agaagtagaaattcactttcttatg--caatcgagtatggatgaaaaatattttgatt 2827665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 38167940 - 38167874
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||| ||||||||||| | |||| |||| ||||||| |||||| || |||||||| ||||||||||    
T  38167940 aagaaaaaattcacttattcatatgcaatcgagtatgaatgaaagatgttttgattgactctttaat 38167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 39713278 - 39713319
Alignment:
Q  66 caattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    |||| |||||||||||||| || |||||||||||||||||||    
T  39713278 caatcgagtatggatgaaagatgttttgattcactctttaat 39713319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 35329194 - 35329134
Alignment:
Q  47 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||||||| |||||| |||   |||||| |||||| || |||||||||||||||||||    
T  35329194 aaattcacttatttatatacaagctagtatgaatgaaagatgttttgattcactctttaat 35329134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 41046 - 41349
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41046 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaagatattttgattcact 41145  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  41146 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatgggatgaaagagggtgaaactcactgacaatgaataaaattag 41245  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||  |||||         ||||||||||||||||||||||       |||| |||||||||||||||    
T  41246 ggttttaagaaaatttatataaaagggcaattttgatattataaaaaaaaattaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaa 41345  T
Q  301 actc 304  Q
    ||||    
T  41346 actc 41349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 1670 - 1366
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  1670 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttact 1571  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattag 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  1570 ctttaattttcatggagattgatattgaacatcagattgtttgatcgatctctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattag 1471  T
Q  201 ggttttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaa 300  Q
    ||||||||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||    
T  1470 ggttttaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccagaaaaacatggggtgtaaatagaaaa 1371  T
Q  301 actct 305  Q
    |||||    
T  1370 actct 1366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 4535 - 4738
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4535 tgcagttgaaggaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 4634  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4635 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtggggtgaaagagggtgaaactcactgacaatgaataaaattagggtt 4734  T
Q  205 ttaa 208  Q
    ||||    
T  4735 ttaa 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 14386 - 14685
Alignment:
Q  5 tgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactcttt 104  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  14386 tgcagttgaaggaaataaattgaaactagcaaatagaagaagaaattcacttacttatatctaattgagtatgtatgaaaaatattttgattcactcttt 14485  T
Q  105 aattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggtt 204  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||    
T  14486 aattttcatgaagattgatattgaacatcaaattgtttgatcgatcgttttgtggggtgaaagagggtgaaactcactgacaatgaataaaattaggatt 14585  T
Q  205 ttaaannnnnnnatataaaagggcaattttggaattatnnnnnnnntttaagaaaatttgggtgtaaccnnnnnnncatgaggtgtaaatagaaaaactc 304  Q
    | ||        |||||||||||||||||||| |||||         ||||||||||||||||||||||       |||| |||||||||||||||||||    
T  14586 taaagaaaatttatataaaagggcaattttggtattataaaaaaaaattaagaaaatttgggtgtaaccaaaaaaacatggggtgtaaatagaaaaactc 14685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 156647 - 156453
Alignment:
Q  5 tgcagttgaaggaaaaaag-ttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 103  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  156647 tgcagttgaaggaaaaaaaattgaaactagcaaatagaagaagaaattcacttacttatattcaattgagtatgtatgaaaaatattttgattcactctt 156548  T
Q  104 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttatggggtaaaagagggtgaaactcaccgacaatgaataaaattagggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||          ||||||||||||| |||||||||||||||||||||    
T  156547 taattttcatggagattgatattgaacatcaaattgtttgatcgatcgctttgtg----------gggtgaaactcactgacaatgaataaaattagggt 156458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 200501 - 200569
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||| ||||||| | |||| |||| ||||||| |||||| ||||||| ||||||||||||||    
T  200501 agaagaaaaaaatcacttattcatatgcaatcgagtatgaatgaaagatatttttattcactctttaat 200569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 37639 - 37491
Alignment:
Q  1 tcagtgcagttgaaggaaaaaagttgaaactagtaaatagaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37639 tcagtgcagttgaaggaaaaaaattgaaactagcaaatagaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcact 37540  T
Q  101 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37539 ctttaattttcatggagattgatattgaacatcaaattgtttgatcgat 37491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 3959 - 3874
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttc-atggagattgat 123  Q
    ||||||||||||||| ||| |||||| |||| ||||||||| |||| ||||||||||||||| |||||| ||| || |||||||||    
T  3959 agaagaagaaattcaattatttatatgcaatagagtatggacgaaagatattttgattcactttttaatcttctatagagattgat 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 129 - 197
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 107  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| || |||||||||||||||||||    
T  129 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaat 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 365316 - 365208
Alignment:
Q  39 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatc-aaa 136  Q
    ||||||| ||||||  ||| ||| || |||| ||||||| |||||| || ||||||||||||||||||| || ||| ||||||   |||||||||| |||    
T  365316 agaagaaaaaattcgattatttagatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagatt--aattgaacatcgaaa 365219  T
Q  137 ttgtttgatcg 147  Q
    |||||||||||    
T  365218 ttgtttgatcg 365208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 9308 - 9413
Alignment:
Q  41 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatggagattgatattgaacatca-aatt 138  Q
    ||||| ||||||||||  |||||| |||| ||||||| ||||||  | ||||||||||||||||||| |||||| ||||||   |||||||||||  |||    
T  9308 aagaaaaaattcacttgtttatatgcaatcgagtatgaatgaaag-tgttttgattcactctttaatctttcatagagatt--aattgaacatcaggatt 9404  T
Q  139 gtttgatcg 147  Q
    |||||||||    
T  9405 gtttgatcg 9413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University