View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10163_low_2 (Length: 537)

Name: NF10163_low_2
Description: NF10163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10163_low_2
NF10163_low_2
[»] chr8 (48 HSPs)
chr8 (1-528)||(10014539-10015066)
chr8 (45-289)||(4743498-4743743)
chr8 (44-247)||(30143003-30143205)
chr8 (110-246)||(42435579-42435715)
chr8 (44-245)||(15212448-15212649)
chr8 (45-246)||(43036085-43036285)
chr8 (44-250)||(4731317-4731521)
chr8 (120-235)||(1746598-1746714)
chr8 (45-195)||(3051459-3051609)
chr8 (120-235)||(34254708-34254824)
chr8 (120-235)||(34256884-34257000)
chr8 (111-245)||(11383451-11383585)
chr8 (116-241)||(22975983-22976108)
chr8 (120-235)||(42497887-42498003)
chr8 (267-328)||(10014242-10014303)
chr8 (111-235)||(19945710-19945835)
chr8 (111-236)||(27810970-27811095)
chr8 (330-422)||(34254900-34254993)
chr8 (111-424)||(4733309-4733622)
chr8 (44-235)||(12702943-12703134)
chr8 (120-235)||(31217929-31218045)
chr8 (119-201)||(4283035-4283117)
chr8 (306-391)||(40220186-40220271)
chr8 (146-221)||(10929492-10929567)
chr8 (111-224)||(40221230-40221343)
chr8 (44-163)||(5702121-5702240)
chr8 (120-201)||(17982359-17982441)
chr8 (63-159)||(23799221-23799317)
chr8 (44-163)||(33351895-33352013)
chr8 (116-243)||(1345745-1345873)
chr8 (111-173)||(4696259-4696321)
chr8 (124-201)||(44303560-44303638)
chr8 (110-222)||(19175314-19175427)
chr8 (309-414)||(19492236-19492340)
chr8 (309-371)||(26268766-26268827)
chr8 (330-420)||(41365408-41365500)
chr8 (2-46)||(10929674-10929718)
chr8 (304-374)||(17849500-17849569)
chr8 (120-201)||(19948701-19948783)
chr8 (191-237)||(33351842-33351888)
chr8 (1-38)||(3303920-3303957)
chr8 (1-46)||(6598845-6598890)
chr8 (1-46)||(6674298-6674343)
chr8 (185-221)||(2627428-2627464)
chr8 (307-371)||(15949132-15949195)
chr8 (1-37)||(30143224-30143260)
chr8 (1-37)||(42498076-42498112)
chr8 (1-37)||(43036305-43036341)
[»] chr6 (44 HSPs)
chr6 (44-230)||(21272563-21272749)
chr6 (111-235)||(9183381-9183505)
chr6 (45-238)||(22964037-22964229)
chr6 (45-238)||(23824164-23824356)
chr6 (43-221)||(24435555-24435733)
chr6 (134-245)||(21593111-21593222)
chr6 (111-192)||(26954674-26954755)
chr6 (44-163)||(5017137-5017256)
chr6 (120-235)||(5407288-5407404)
chr6 (120-235)||(5411613-5411729)
chr6 (63-170)||(18234439-18234546)
chr6 (75-245)||(31979885-31980056)
chr6 (459-521)||(3050865-3050927)
chr6 (330-422)||(5406750-5406843)
chr6 (330-422)||(5411075-5411168)
chr6 (120-201)||(5413828-5413910)
chr6 (330-422)||(5407518-5407611)
chr6 (330-422)||(5411843-5411936)
chr6 (110-238)||(10076757-10076885)
chr6 (46-201)||(33160661-33160816)
chr6 (116-222)||(603613-603719)
chr6 (120-201)||(5406578-5406660)
chr6 (120-201)||(5410903-5410985)
chr6 (120-201)||(16452820-16452902)
chr6 (120-201)||(30834917-30834999)
chr6 (44-163)||(31086114-31086234)
chr6 (133-223)||(3809320-3809407)
chr6 (324-422)||(16554358-16554458)
chr6 (324-422)||(16630914-16631014)
chr6 (324-422)||(16652620-16652720)
chr6 (111-222)||(5571846-5571957)
chr6 (110-168)||(5757115-5757173)
chr6 (133-218)||(26661421-26661506)
chr6 (133-218)||(26767392-26767477)
chr6 (123-163)||(16452712-16452752)
chr6 (120-163)||(31405054-31405097)
chr6 (151-289)||(17759357-17759494)
chr6 (111-168)||(23896736-23896793)
chr6 (1-46)||(26954535-26954580)
chr6 (324-413)||(34166584-34166670)
chr6 (309-349)||(24543165-24543205)
chr6 (44-224)||(33211490-33211668)
chr6 (65-195)||(24714730-24714860)
chr6 (1-37)||(9183281-9183317)
[»] chr7 (63 HSPs)
chr7 (44-291)||(6570210-6570457)
chr7 (42-245)||(47676439-47676642)
chr7 (48-245)||(14070142-14070339)
chr7 (48-245)||(14380170-14380367)
chr7 (44-245)||(4585824-4586024)
chr7 (42-245)||(47674246-47674449)
chr7 (43-237)||(18126316-18126508)
chr7 (44-222)||(33332032-33332210)
chr7 (44-221)||(4538855-4539032)
chr7 (44-201)||(46515911-46516067)
chr7 (120-235)||(4178447-4178563)
chr7 (44-201)||(2761607-2761763)
chr7 (96-284)||(6360486-6360673)
chr7 (120-235)||(23554712-23554828)
chr7 (44-221)||(2647280-2647457)
chr7 (116-238)||(27347594-27347715)
chr7 (330-424)||(48491083-48491177)
chr7 (120-235)||(19495642-19495759)
chr7 (96-245)||(32358410-32358559)
chr7 (43-224)||(26416997-26417182)
chr7 (110-250)||(48489089-48489228)
chr7 (43-201)||(1113363-1113521)
chr7 (111-245)||(2389737-2389871)
chr7 (111-224)||(43863945-43864058)
chr7 (44-245)||(49092026-49092230)
chr7 (305-391)||(4509388-4509474)
chr7 (305-391)||(4511230-4511316)
chr7 (305-391)||(6431362-6431448)
chr7 (324-424)||(47674529-47674628)
chr7 (44-170)||(21989245-21989370)
chr7 (120-201)||(24515140-24515222)
chr7 (133-222)||(30026393-30026481)
chr7 (110-170)||(21983645-21983705)
chr7 (120-194)||(35853626-35853701)
chr7 (110-201)||(48491285-48491376)
chr7 (110-168)||(44847762-44847820)
chr7 (111-192)||(496365-496446)
chr7 (123-168)||(2479751-2479796)
chr7 (306-371)||(44011265-44011330)
chr7 (120-200)||(3050523-3050603)
chr7 (111-222)||(4796251-4796362)
chr7 (1-46)||(38671472-38671517)
chr7 (324-382)||(6592917-6592976)
chr7 (324-382)||(18390558-18390617)
chr7 (304-382)||(4175357-4175435)
chr7 (110-168)||(47264045-47264103)
chr7 (110-163)||(79792-79845)
chr7 (1-38)||(4586042-4586079)
chr7 (1-38)||(12098122-12098159)
chr7 (184-221)||(25767399-25767436)
chr7 (330-371)||(26214631-26214672)
chr7 (1-46)||(31105643-31105688)
chr7 (205-250)||(48491258-48491302)
chr7 (184-289)||(48599940-48600044)
chr7 (1-37)||(1113539-1113575)
chr7 (44-92)||(2759084-2759131)
chr7 (205-289)||(2761746-2761829)
chr7 (1-37)||(4253780-4253816)
chr7 (324-384)||(9189443-9189503)
chr7 (1-37)||(18126526-18126562)
chr7 (1-37)||(30024982-30025018)
chr7 (1-37)||(43864126-43864162)
chr7 (1-37)||(48489313-48489349)
[»] chr2 (45 HSPs)
chr2 (44-289)||(36318314-36318559)
chr2 (44-235)||(34389188-34389379)
chr2 (44-237)||(20522559-20522752)
chr2 (44-237)||(2837149-2837341)
chr2 (63-222)||(21630301-21630460)
chr2 (44-245)||(33528182-33528384)
chr2 (115-221)||(40015314-40015420)
chr2 (124-235)||(36988459-36988571)
chr2 (120-235)||(45099427-45099543)
chr2 (43-237)||(33118471-33118665)
chr2 (66-237)||(39483235-39483407)
chr2 (110-201)||(2334787-2334879)
chr2 (120-201)||(5723634-5723716)
chr2 (44-170)||(23078106-23078231)
chr2 (124-201)||(4503516-4503594)
chr2 (110-168)||(28258814-28258872)
chr2 (144-235)||(6595398-6595490)
chr2 (44-108)||(17057674-17057737)
chr2 (44-108)||(17085657-17085720)
chr2 (119-170)||(17865589-17865640)
chr2 (456-507)||(34907585-34907635)
chr2 (144-231)||(39284574-39284661)
chr2 (63-213)||(14698600-14698750)
chr2 (184-245)||(45726469-45726530)
chr2 (43-162)||(10706895-10707013)
chr2 (146-245)||(17863855-17863955)
chr2 (144-235)||(29867552-29867644)
chr2 (44-163)||(8389790-8389909)
chr2 (1-46)||(11151841-11151886)
chr2 (1-46)||(11690374-11690419)
chr2 (1-46)||(14202657-14202702)
chr2 (116-245)||(35447477-35447606)
chr2 (124-200)||(36206049-36206126)
chr2 (1-46)||(42362225-42362270)
chr2 (63-163)||(13569686-13569785)
chr2 (311-387)||(31056675-31056751)
chr2 (44-108)||(38312040-38312103)
chr2 (1-39)||(723994-724032)
chr2 (8-46)||(14634083-14634121)
chr2 (1-46)||(34140021-34140066)
chr2 (44-93)||(39284700-39284748)
chr2 (1-37)||(2334667-2334703)
chr2 (1-37)||(11067174-11067210)
chr2 (1-37)||(36318259-36318295)
chr2 (1-37)||(39284767-39284803)
[»] chr1 (59 HSPs)
chr1 (44-289)||(49917969-49918212)
chr1 (44-289)||(4552952-4553197)
chr1 (89-250)||(37033636-37033797)
chr1 (46-238)||(31658908-31659099)
chr1 (90-222)||(16455332-16455464)
chr1 (44-221)||(3156554-3156729)
chr1 (63-195)||(46064631-46064763)
chr1 (44-238)||(10924893-10925086)
chr1 (309-424)||(776751-776866)
chr1 (44-170)||(13598737-13598863)
chr1 (44-238)||(28223726-28223920)
chr1 (111-289)||(11348121-11348298)
chr1 (120-235)||(20762344-20762460)
chr1 (44-238)||(28220531-28220725)
chr1 (110-224)||(44454843-44454957)
chr1 (309-424)||(50167718-50167839)
chr1 (44-222)||(37070104-37070283)
chr1 (110-235)||(3189023-3189150)
chr1 (110-235)||(3197840-3197967)
chr1 (110-235)||(3206658-3206785)
chr1 (44-163)||(29652150-29652269)
chr1 (45-224)||(1833205-1833384)
chr1 (44-200)||(30476753-30476908)
chr1 (120-200)||(13316698-13316779)
chr1 (307-391)||(13547837-13547922)
chr1 (44-222)||(3282044-3282222)
chr1 (111-195)||(29135763-29135847)
chr1 (118-245)||(193057-193184)
chr1 (44-170)||(21536205-21536330)
chr1 (96-195)||(22819819-22819918)
chr1 (110-168)||(13604259-13604317)
chr1 (366-424)||(28221484-28221542)
chr1 (309-414)||(41360441-41360545)
chr1 (333-424)||(31658721-31658812)
chr1 (324-391)||(19753902-19753969)
chr1 (110-200)||(13547677-13547766)
chr1 (110-200)||(13549588-13549677)
chr1 (1-38)||(928228-928265)
chr1 (125-162)||(15820053-15820090)
chr1 (1-38)||(40122448-40122485)
chr1 (133-222)||(13659696-13659782)
chr1 (311-382)||(47703333-47703404)
chr1 (1-43)||(834417-834459)
chr1 (8-46)||(3847378-3847416)
chr1 (325-391)||(31928443-31928509)
chr1 (44-102)||(37503859-37503916)
chr1 (1-46)||(197158-197203)
chr1 (1-38)||(13138224-13138261)
chr1 (137-170)||(16124294-16124327)
chr1 (1-37)||(3156748-3156784)
chr1 (1-37)||(3189213-3189249)
chr1 (1-37)||(3198030-3198066)
chr1 (1-37)||(3206869-3206905)
chr1 (185-221)||(9986895-9986931)
chr1 (10-46)||(13659595-13659631)
chr1 (1-37)||(28220476-28220512)
chr1 (1-37)||(28223671-28223707)
chr1 (1-37)||(31659120-31659156)
chr1 (1-37)||(49918231-49918267)
[»] chr3 (83 HSPs)
chr3 (43-245)||(29812725-29812927)
chr3 (133-424)||(44331052-44331344)
chr3 (111-246)||(49200040-49200175)
chr3 (44-163)||(40734243-40734361)
chr3 (116-241)||(4569400-4569525)
chr3 (116-245)||(46173179-46173307)
chr3 (120-235)||(7761937-7762052)
chr3 (111-245)||(31340631-31340766)
chr3 (43-237)||(29810539-29810732)
chr3 (120-235)||(7764124-7764240)
chr3 (120-235)||(9636508-9636624)
chr3 (89-245)||(55302532-55302687)
chr3 (110-289)||(54593106-54593284)
chr3 (44-222)||(8126967-8127145)
chr3 (43-192)||(24694767-24694916)
chr3 (111-289)||(34490634-34490811)
chr3 (45-222)||(40592353-40592530)
chr3 (110-222)||(43404321-43404433)
chr3 (120-235)||(45094836-45094952)
chr3 (44-163)||(47923534-47923653)
chr3 (110-224)||(5236827-5236941)
chr3 (127-224)||(5258531-5258629)
chr3 (44-246)||(44331752-44331953)
chr3 (97-222)||(43402365-43402490)
chr3 (44-235)||(1735863-1736053)
chr3 (43-245)||(8370037-8370239)
chr3 (324-424)||(29812547-29812645)
chr3 (44-170)||(36029430-36029556)
chr3 (110-244)||(6096188-6096322)
chr3 (48-250)||(23410639-23410840)
chr3 (120-224)||(3393290-3393394)
chr3 (324-422)||(7763935-7764034)
chr3 (330-422)||(9634892-9634985)
chr3 (110-245)||(21711604-21711740)
chr3 (44-163)||(30709427-30709546)
chr3 (324-420)||(37407941-37408040)
chr3 (63-222)||(39032126-39032285)
chr3 (330-424)||(2075572-2075667)
chr3 (63-245)||(16264705-16264887)
chr3 (44-163)||(25929026-25929145)
chr3 (330-424)||(40734911-40735005)
chr3 (144-222)||(36018330-36018408)
chr3 (330-422)||(5258717-5258810)
chr3 (324-422)||(6718192-6718292)
chr3 (309-384)||(4386445-4386520)
chr3 (75-162)||(40845021-40845108)
chr3 (63-170)||(48438571-48438678)
chr3 (114-168)||(27038448-27038502)
chr3 (110-168)||(37408199-37408257)
chr3 (78-163)||(40735174-40735259)
chr3 (110-221)||(33386247-33386359)
chr3 (110-222)||(40912805-40912917)
chr3 (111-200)||(53921855-53921946)
chr3 (120-163)||(27027118-27027161)
chr3 (124-201)||(5260707-5260785)
chr3 (110-168)||(37726077-37726135)
chr3 (324-413)||(10057945-10058031)
chr3 (324-413)||(10060167-10060253)
chr3 (324-413)||(10062389-10062475)
chr3 (324-413)||(10064611-10064697)
chr3 (324-413)||(10066833-10066919)
chr3 (1-46)||(26386731-26386776)
chr3 (111-168)||(27986102-27986159)
chr3 (1-46)||(39153611-39153656)
chr3 (324-422)||(23198526-23198626)
chr3 (1-49)||(51398684-51398732)
chr3 (324-382)||(4599103-4599162)
chr3 (324-382)||(10210923-10210982)
chr3 (133-222)||(16498752-16498838)
chr3 (110-168)||(27453359-27453417)
chr3 (317-391)||(43402588-43402661)
chr3 (144-245)||(51398488-51398590)
chr3 (1-46)||(22835252-22835297)
chr3 (205-250)||(24694730-24694775)
chr3 (44-160)||(27974586-27974701)
chr3 (1-38)||(29196651-29196688)
chr3 (1-38)||(32744676-32744713)
chr3 (1-37)||(7762148-7762184)
chr3 (10-46)||(16498903-16498939)
chr3 (1-37)||(29812945-29812981)
chr3 (1-37)||(40735265-40735301)
chr3 (1-37)||(44331437-44331473)
chr3 (1-49)||(53921753-53921801)
[»] chr5 (47 HSPs)
chr5 (44-245)||(42426540-42426741)
chr5 (44-244)||(13487869-13488066)
chr5 (44-201)||(19806113-19806269)
chr5 (44-245)||(32636486-32636687)
chr5 (120-245)||(37438808-37438934)
chr5 (110-244)||(5057495-5057629)
chr5 (44-235)||(13239425-13239615)
chr5 (44-170)||(12083812-12083937)
chr5 (76-239)||(16650958-16651121)
chr5 (330-424)||(13487702-13487796)
chr5 (144-245)||(42428822-42428924)
chr5 (1-161)||(16649872-16650044)
chr5 (165-328)||(3076045-3076210)
chr5 (44-201)||(11181433-11181592)
chr5 (111-195)||(535616-535700)
chr5 (117-201)||(39468909-39468993)
chr5 (120-201)||(25412468-25412550)
chr5 (324-422)||(29722055-29722156)
chr5 (110-170)||(14520632-14520692)
chr5 (133-245)||(40146712-40146824)
chr5 (328-424)||(42426825-42426921)
chr5 (110-201)||(27015021-27015112)
chr5 (144-235)||(30683312-30683403)
chr5 (109-168)||(36931986-36932045)
chr5 (120-201)||(13342767-13342849)
chr5 (120-193)||(30182302-30182376)
chr5 (44-168)||(11916608-11916732)
chr5 (110-160)||(38746535-38746585)
chr5 (324-422)||(16408981-16409081)
chr5 (317-371)||(535459-535513)
chr5 (110-168)||(9352971-9353029)
chr5 (184-245)||(213007-213068)
chr5 (1-46)||(5887666-5887711)
chr5 (1-46)||(16451954-16451999)
chr5 (1-46)||(31182846-31182891)
chr5 (110-162)||(31004796-31004848)
chr5 (123-163)||(36074427-36074467)
chr5 (324-382)||(16546161-16546220)
chr5 (324-382)||(40381834-40381893)
chr5 (205-243)||(11181412-11181450)
chr5 (144-222)||(38746456-38746534)
chr5 (144-201)||(533488-533545)
chr5 (44-93)||(535698-535746)
chr5 (44-93)||(42428735-42428783)
chr5 (1-37)||(13488085-13488121)
chr5 (1-37)||(28750905-28750941)
chr5 (1-37)||(39468799-39468835)
[»] chr4 (67 HSPs)
chr4 (111-290)||(3909715-3909893)
chr4 (44-222)||(36314812-36314990)
chr4 (44-222)||(36329021-36329199)
chr4 (44-235)||(25861601-25861793)
chr4 (120-235)||(52095740-52095856)
chr4 (110-246)||(6655400-6655536)
chr4 (110-235)||(26363720-26363845)
chr4 (44-220)||(34570719-34570894)
chr4 (44-223)||(37740311-37740489)
chr4 (335-426)||(54882320-54882411)
chr4 (111-245)||(54882485-54882619)
chr4 (120-217)||(24968801-24968898)
chr4 (44-237)||(5268766-5268960)
chr4 (110-245)||(9927831-9927966)
chr4 (111-231)||(12745787-12745908)
chr4 (307-424)||(29055866-29055983)
chr4 (110-222)||(27417539-27417651)
chr4 (44-238)||(6742981-6743175)
chr4 (44-221)||(8689079-8689256)
chr4 (110-224)||(40630450-40630564)
chr4 (116-289)||(5429299-5429472)
chr4 (111-284)||(46570115-46570287)
chr4 (144-239)||(5370479-5370575)
chr4 (110-222)||(41639033-41639145)
chr4 (47-222)||(54867519-54867694)
chr4 (330-424)||(34570996-34571091)
chr4 (110-224)||(50674434-50674548)
chr4 (43-201)||(54200210-54200367)
chr4 (166-242)||(18377798-18377874)
chr4 (45-161)||(38152081-38152197)
chr4 (144-289)||(2209122-2209266)
chr4 (46-224)||(35661905-35662070)
chr4 (110-170)||(5148080-5148140)
chr4 (110-250)||(36994219-36994358)
chr4 (110-201)||(52083027-52083119)
chr4 (110-201)||(52094034-52094126)
chr4 (144-235)||(56179028-56179120)
chr4 (44-163)||(16622935-16623053)
chr4 (144-289)||(26176028-26176172)
chr4 (44-201)||(29254201-29254357)
chr4 (330-424)||(12740129-12740222)
chr4 (330-424)||(12748335-12748428)
chr4 (110-160)||(16628517-16628567)
chr4 (111-161)||(39773981-39774031)
chr4 (120-243)||(3777961-3778085)
chr4 (144-238)||(12739942-12740037)
chr4 (144-238)||(12748148-12748243)
chr4 (111-168)||(5396327-5396384)
chr4 (306-371)||(36770966-36771031)
chr4 (324-383)||(5137819-5137879)
chr4 (110-170)||(5143663-5143723)
chr4 (3-46)||(5871693-5871736)
chr4 (324-382)||(7124434-7124493)
chr4 (324-382)||(8395136-8395195)
chr4 (184-250)||(13992732-13992797)
chr4 (44-102)||(26175941-26175998)
chr4 (140-201)||(30000873-30000935)
chr4 (144-221)||(55085955-55086032)
chr4 (1-46)||(24968984-24969029)
chr4 (1-38)||(46147605-46147642)
chr4 (1-49)||(5429549-5429597)
chr4 (1-37)||(9927707-9927743)
chr4 (1-37)||(48142924-48142960)
chr4 (1-37)||(52082907-52082943)
chr4 (1-37)||(52093914-52093950)
chr4 (1-37)||(52095612-52095648)
chr4 (1-37)||(56178886-56178922)
[»] scaffold0066 (1 HSPs)
scaffold0066 (44-284)||(20720-20959)
[»] scaffold0014 (1 HSPs)
scaffold0014 (110-245)||(80871-81006)
[»] scaffold0286 (1 HSPs)
scaffold0286 (110-246)||(11002-11138)
[»] scaffold0176 (1 HSPs)
scaffold0176 (111-257)||(17635-17781)
[»] scaffold0006 (5 HSPs)
scaffold0006 (44-170)||(6022-6148)
scaffold0006 (44-168)||(2830-2954)
scaffold0006 (110-168)||(132916-132974)
scaffold0006 (133-222)||(149457-149543)
scaffold0006 (10-46)||(149356-149392)
[»] scaffold0002 (1 HSPs)
scaffold0002 (120-222)||(434217-434321)
[»] scaffold0087 (2 HSPs)
scaffold0087 (110-168)||(43598-43656)
scaffold0087 (110-250)||(36387-36527)
[»] scaffold0491 (1 HSPs)
scaffold0491 (324-422)||(9304-9404)
[»] scaffold0140 (1 HSPs)
scaffold0140 (109-168)||(8054-8113)
[»] scaffold0016 (1 HSPs)
scaffold0016 (120-224)||(114270-114374)
[»] scaffold0098 (1 HSPs)
scaffold0098 (110-265)||(45601-45756)
[»] scaffold0466 (2 HSPs)
scaffold0466 (110-201)||(6816-6907)
scaffold0466 (205-245)||(6793-6833)
[»] scaffold1908 (1 HSPs)
scaffold1908 (351-424)||(1041-1114)
[»] scaffold0510 (1 HSPs)
scaffold0510 (120-168)||(1247-1295)
[»] scaffold0084 (1 HSPs)
scaffold0084 (184-223)||(25531-25570)


Alignment Details
Target: chr8 (Bit Score: 516; Significance: 0; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 1 - 528
Target Start/End: Complemental strand, 10015066 - 10014539
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10015066 tcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtc 10014967  T
Q  101 acaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014966 acaattggtcaaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 10014867  T
Q  201 gcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014866 gcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgct 10014767  T
Q  301 caaatcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014766 caaatcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcc 10014667  T
Q  401 cttgcatctaactacaccaagtagttacaccgaacgggagatattacaaacttgatgttaaaaaatgttgggataatttattttgtcacttgatgatgtt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014666 cttgcatctaactacaccaagtagttacaccgaacgggagatattacaaacttgatgttaaaaaatgttgggataatttattttgtcacttgatgatgtt 10014567  T
Q  501 acaccgagcggaagatattcatctcact 528  Q
    |||||||||||||||||||||| |||||    
T  10014566 acaccgagcggaagatattcatgtcact 10014539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 45 - 289
Target Start/End: Original strand, 4743498 - 4743743
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||||||| ||||||| ||| |||||||||  ||||||| | |||| ||  || | |||||||||||||| ||||||| ||||||||| ||    
T  4743498 ttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacgg 4743597  T
Q  145 tacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||  |||||||||||||| | | |||||||||||| | || | ||||||||||||||||||||| |||||  |||||||||||    
T  4743598 tacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaaaatcgtgtcacgattggacacccttcaaaacatgctc 4743697  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    ||| ||| |  |||||||| |||| | ||| |||||||||| ||||    
T  4743698 acggcattgcgaaattgtgacatgcttcactaatcgtgtcacgatt 4743743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 44 - 247
Target Start/End: Complemental strand, 30143205 - 30143003
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||||| |||||| ||||||| ||| |||||||||||||||||||  |||||||  || | ||||| |||||||| ||| ||| ||||||||||     
T  30143205 cttcaaaatctacaaaga-acacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaa 30143107  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||  |||| || | |||| ||| ||||||||||||   || ||||||||||||||||||||||| |||||| |||||||||||    
T  30143106 gtacgaccaaccttatccttaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattggacaccctgcaaaacatgctc 30143007  T
Q  244 acga 247  Q
    ||||    
T  30143006 acga 30143003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 42435579 - 42435715
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||| | | |||||||||||| | || ||||||||    
T  42435579 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgtttccccaaaat 42435678  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacg 246  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  42435679 cgtgtcacgattggacaccctgcaaaacatgctcacg 42435715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 15212649 - 15212448
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||| ||||| ||||||| ||| |||||||||| ||||| ||  |||||||| ||    |||| |||||||| ||| ||| |||||||||||    
T  15212649 cttcaaaatctgtaaaga-acacttatatagcagtcttcagctgtcacaatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaag 15212551  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 242  Q
    |||||||||||||||||||| |||| |||  |||| ||| |||||||||||| | || ||||||||||||||||||||||| |||||| |||| ||||||    
T  15212550 gtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 15212451  T
Q  243 cac 245  Q
    |||    
T  15212450 cac 15212448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 246
Target Start/End: Complemental strand, 43036285 - 43036085
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||| ||||||    
T  43036285 ttcaaaatctgcaaaga-acacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaagg 43036187  T
Q  145 tacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctca 244  Q
    ||||| ||||||||||||| |||| |||| | || | | |||||||||||| | ||  |||||||||||||||||||||| |||||| ||||||||||||    
T  43036186 tacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatgctca 43036087  T
Q  245 cg 246  Q
    ||    
T  43036086 cg 43036085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 44 - 250
Target Start/End: Complemental strand, 4731521 - 4731317
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||||| |||||| ||||||| |||  ||||||||| | ||||||  |||||||  || | ||||| |||||||  ||| ||| |||| ||||||    
T  4731521 cttcaaaatctacaaaga-acacttatatagtagtcttcagctatcaaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaag 4731423  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||| ||||| ||| ||||||| | |||| ||| |||||| ||||||| || ||||||||||||||||||||||| |||||| |||||| ||||    
T  4731422 gtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaatcatgtcatgttttcccaaaatcgtgtcacgattggacaccctgtaaaaca-gctc 4731324  T
Q  244 acgacat 250  Q
    |||||||    
T  4731323 acgacat 4731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 1746598 - 1746714
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  1746598 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 1746697  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  1746698 attggacgccctgaaaa 1746714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 3051459 - 3051609
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaatt-gtgacacgattgatgcatacgacccaag 143  Q
    ||||||||||||| ||| ||||||| |||  | ||| ||| | |||||| |||||||| ||||  |||||| ||| |||||||||||||||||||||||     
T  3051459 ttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacgattgc-caaattcgtgtcacgattgatgcatacgacccaat 3051557  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    ||||||||||||||||| || ||||||| ||| |||||||||||||||||||    
T  3051558 gtacgaccaaccttatcttgaaaacgtgtcaaacatgccaaaaatcgtgtca 3051609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 34254708 - 34254824
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| ||||  ||||||||||||||| |||| ||||||||||||||| |    
T  34254708 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatcgtgtcatg 34254807  T
Q  219 attggaaaccctgaaaa 235  Q
    ||| ||  |||||||||    
T  34254808 attagacgccctgaaaa 34254824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 34256884 - 34257000
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||| ||| | |||  |||| |||||||||||||||| |||| |||||||||||||||||    
T  34256884 cacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 34256983  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  34256984 attggacgccctgaaaa 34257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 11383585 - 11383451
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||||||| |||||||||| ||||||||||||||||| || |||  |||| |||| ||  |||||||||||| | || |||||||||    
T  11383585 aaatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatc 11383486  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||| |||||| ||||| |||| |||||||||    
T  11383485 gtgtcacaattggacaccctaaaaaccatgctcac 11383451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 22976108 - 22975983
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| | |||||||| ||||||| |||||||||||| |||| || |||||| ||  |||||||||||| | || ||||||||||||||    
T  22976108 gtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtc 22976009  T
Q  216 acgattggaaaccctgaaaaacatgc 241  Q
    ||||||||| |||||||||| |||||    
T  22976008 acgattggacaccctgaaaaccatgc 22975983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 42498003 - 42497887
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| || ||||||||||||||| |||||||||||| ||| | |||| |||| ||||| ||||||||||  ||| |||||||||||||||||    
T  42498003 cacgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  42497903 attggacgccctgaaaa 42497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 10014303 - 10014242
Alignment:
Q  267 ggtccacaaatcgtgtcatgatttgtaacatgctcaaatcatttttgagtcactttgcaaca 328  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10014303 ggtccacaaatcgtgtcacgatttgcaacatgctcaaatcatttttgagtcactttgcaaca 10014242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 19945710 - 19945835
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    |||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||| | | || | || |||||||||||||||| |||| || |||||    
T  19945710 aaatcgtgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatttcctaaaat 19945809  T
Q  210 cgtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||||  |||||||||    
T  19945810 cgtgtcacgattggacgccctgaaaa 19945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 27811095 - 27810970
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| ||| ||||||| ||||||||||||||||||| |||| |||| |||| ||| ||||||||||||   || | |||||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatc 27810996  T
Q  211 gtgtcacgattggaaaccctgaaaaa 236  Q
    |||||||||||||| |||||| ||||    
T  27810995 gtgtcacgattggacaccctgcaaaa 27810970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 34254900 - 34254993
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  34254900 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactacaccaagt 34254993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 111 - 424
Target Start/End: Complemental strand, 4733622 - 4733309
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| |||||||||||||||||| |||  ||||||| |||||||   || | ||| |||||||||||| | || |||||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgc-tcaaa-tcat 308  Q
    |||||||||||| | |||||| |||||| ||||||||||| |  |||| ||| ||  ||   |||||||||||||||||  | || | | ||||| |||     
T  4733522 gtgtcacgattgaacaccctggaaaaca-gctcacgacattgcgaaatcgtgacacagttgccaaatcgtgtcatgattcttcactttcttcaaactcaa 4733424  T
Q  309 ttttg-agtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcat 407  Q
    ||||| || || |   ||||| |||||||||||| ||  ||| ||||||||||||||| |||||  | |||||||| |  |||||||||||||||  |||    
T  4733423 ttttgaaggca-tacacaaca-ttctccaccttggcttcaaattgatgatgatgccacattaaccttcaaccaccaattcccttttcttttccctgacat 4733326  T
Q  408 ctaactacaccaagtag 424  Q
    | |||||||||||||||    
T  4733325 ccaactacaccaagtag 4733309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 235
Target Start/End: Original strand, 12702943 - 12703134
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtc-aaattgtgacacgattgatgcatacgacccaa 142  Q
    ||||||||| |||||||| ||||||||||| || ||||||  ||||||||  |||||||  ||   | |||| ||||||||  || ||| ||||||||||    
T  12702943 cttcaaaatatgcaaaga-acacttacataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaa 12703041  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
     |||||||||||||||||||| || | |||  |||| ||  |||||||||||| | || ||||||||||||||||||||||| || |||||||    
T  12703042 tgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacactctgaaaa 12703134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 31218045 - 31217929
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| || || ||||||||||||||||||||||||  ||| | |||| | || |||||||||||||||| |||| ||||||||||||||||     
T  31218045 cacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcaca 31217946  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  31217945 attggacgccctgaaaa 31217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 4283117 - 4283035
Alignment:
Q  119 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| |||||    
T  4283117 acacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgattg 4283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 40220186 - 40220271
Alignment:
Q  306 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    |||||||||||||  |  ||||| ||||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||    
T  40220186 catttttgagtcatatctcaacaattctccaccttgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctt 40220271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 10929567 - 10929492
Alignment:
Q  146 acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  10929567 acgaccaaccttatcctcaaaacgtgtcaagcatgccaaaaatcgtatcacgattgatcaaaatcgtgtcacgatt 10929492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 40221343 - 40221230
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| |||||||||||| ||||| |||||||||||| ||||||| | | || ||  |||||||||||| | || |||||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatc 40221244  T
Q  211 gtgtcacgattgga 224  Q
    ||| ||||||||||    
T  40221243 gtgacacgattgga 40221230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 5702240 - 5702121
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  ||| |||  || | ||||| |||||||||||| ||| ||| | ||||    
T  5702240 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaa 5702142  T
Q  143 ggtacgaccaaccttatcctg 163  Q
    |||||||||||||||||||||    
T  5702141 ggtacgaccaaccttatcctg 5702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17982441 - 17982359
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| ||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  17982441 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 17982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 23799317 - 23799221
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 159  Q
    ||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| ||||||| |||| ||| |||||||||| ||||||||||||||||    
T  23799317 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttat 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 33352013 - 33351895
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||| |||||||| | ||||| ||| |||||||||| ||||||||  |||||||  ||   |||||  ||||||| ||| ||| || ||||||||    
T  33352013 cttcaaaatttgcaaagaaa-acttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaag 33351915  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||    
T  33351914 gtacgaccaaccttatcctg 33351895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 1345745 - 1345873
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggt--acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtg 213  Q
    |||||| | ||||||| |||||||||||||  |||||||||||||||||| ||||||| |||||| ||  ||||| ||||||  |||  |  ||||||||    
T  1345745 gtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaaattgtgtca-cattttctcaaatcgtg 1345843  T
Q  214 tcacgattggaaaccctgaaaaacatgctc 243  Q
    ||||||||| | |||||| | |||||||||    
T  1345844 tcacgattgaacaccctgcagaacatgctc 1345873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 4696321 - 4696259
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 173  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  4696321 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 4696259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 44303638 - 44303560
Alignment:
Q  124 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||| || || ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  44303638 attgatgcgtatgatccaaggtacgaccaaccttatcctggaaatcttgcccagcaagccaaaaatcgtgtcacgattg 44303560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 19175427 - 19175314
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 208  Q
    ||||| ||| |||||||| ||||||||||||||||||  ||||||||||||||| |||||| || |||| |    |||||| ||||| | || |||||||    
T  19175427 caaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcatgtcacgttttcccaaaa 19175328  T
Q  209 tcgtgtcacgattg 222  Q
    ||||| ||||||||    
T  19175327 tcgtgacacgattg 19175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 414
Target Start/End: Original strand, 19492236 - 19492340
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 408  Q
    |||||||||| ||| |||||||||||||||||||||||||  ||||| ||||| ||  ||||| || |||||||||||| || ||| | | |||||||||    
T  19492236 ttttgagtcaattttcaacatttctccaccttgactctaatttgatggtgatgtca-attaaccatcaaccaccattcttctcttcatattccttgcatc 19492334  T
Q  409 taacta 414  Q
     |||||    
T  19492335 caacta 19492340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 26268766 - 26268827
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    |||||||| ||||| |||||||||||||||||||||||||| |  ||||||||||| ||||||    
T  26268766 ttttgagtaacttt-caacatttctccaccttgactctaaattagtgatgatgccaatttaac 26268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 420
Target Start/End: Original strand, 41365408 - 41365500
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttc--ccttgcatctaactacaccaa 420  Q
    |||||||||||| ||  ||| ||||||||||||||||||||| || || ||||| || ||||||  ||||  ||||||||| |||||||||||    
T  41365408 ttctccaccttgccttcaaattgatgatgatgccactttaaccatcaatcaccaatcccctttttctttcttccttgcatccaactacaccaa 41365500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 10929718 - 10929674
Alignment:
Q  2 caaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||    
T  10929718 caaccctaaagttacctcctttgatttcccaagttttcctctctt 10929674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 17849569 - 17849500
Alignment:
Q  304 atcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaat 374  Q
    |||| |||||||||||||| ||||  |||||||||||||||||||| |  |||||||| || |||||||||    
T  17849569 atcaattttgagtcacttt-caactattctccaccttgactctaaattagtgatgatgtcaatttaacaat 17849500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 19948701 - 19948783
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |  ||| | || | |||| |||||||||||||||| |||||    
T  19948701 cacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaaatcgtgtcacgattg 19948783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 33351888 - 33351842
Alignment:
Q  191 tgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||||| || ||||||||||||||||||||||| |||||| |||||    
T  33351888 tgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaaac 33351842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3303920 - 3303957
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  3303920 tcaaccgtaaagttacctcctttgatttcccaagtttt 3303957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6598890 - 6598845
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||  |||||||||||||||||||||| ||||||    
T  6598890 tcaaccctaaagttatctcctttgatttcccaagttttcctctctt 6598845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6674343 - 6674298
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||  |||||||||||||||||||||| ||||||    
T  6674343 tcaaccctaaagttatctcctttgatttcccaagttttcctctctt 6674298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 2627464 - 2627428
Alignment:
Q  185 aaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  2627464 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 2627428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 15949195 - 15949132
Alignment:
Q  307 atttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    |||||| |||| |||| |||||||||||||||||||||||||| ||  |||||| ||| ||||||    
T  15949195 attttttagtcgcttt-caacatttctccaccttgactctaaattggcgatgataccaatttaac 15949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30143260 - 30143224
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  30143260 tcaaccctaaagttacctcctttgatttcccaagttt 30143224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42498112 - 42498076
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  42498112 tcaaccctaaagttacctcctttgatttcccaagttt 42498076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43036341 - 43036305
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  43036341 tcaaccctaaagttacctcctttgatttcccaagttt 43036305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 5e-51; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 44 - 230
Target Start/End: Complemental strand, 21272749 - 21272563
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||| ||||||||| ||||||| ||| ||||||||||||||||||| |||||||| ||||| |||||  ||||||| ||| ||| ||||| |||||    
T  21272749 cttcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaag 21272650  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccct 230  Q
    ||| |||||||||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  21272649 gtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaatcgtgacacgattacccaaaatcgtgtcacgattggacaccct 21272563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 9183381 - 9183505
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||| | |||||||||||||| | || |||||||||    
T  9183381 aaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatc 9183480  T
Q  211 gtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||| ||||| ||||    
T  9183481 gtgtcacgattggacaccctaaaaa 9183505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 22964037 - 22964229
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||||||| ||||||| ||| ||||||||||  |||||||  |||||||  ||   |||||||||||||| |||  || |||||  |||||    
T  22964037 ttcaaaatctgcaaaga-acacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 22964135  T
Q  145 tacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||||||||||||||||||| |||| || | |||| |||||||||||||||| | || ||||||||||| ||||||||| | |||||| ||||||    
T  22964136 tacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaaaca 22964229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 238
Target Start/End: Complemental strand, 23824356 - 23824164
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||||||| ||||||| ||| ||||||||||  |||||||  |||||||  ||   |||||||||||||| |||  || |||||  |||||    
T  23824356 ttcaaaatctgcaaaga-acacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 23824258  T
Q  145 tacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||||||||||||||||||| |||| || | |||| |||||||||||||||| | || ||||||||||| ||||||||| | |||||| ||||||    
T  23824257 tacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaaaca 23824164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 24435733 - 24435555
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||| |||||| | ||||||| ||| |||||||||  |||||||   ||||||| ||||| ||||| |||||||| ||| ||| ||| ||||||    
T  24435733 tcttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaa 24435634  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    ||||||||||||||||||||| ||||||||||| || |   |||||||||||| | || ||||||||| || |||||||    
T  24435633 ggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaatcgtgtcacgttttcccaaaatcatgacacgatt 24435555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 21593222 - 21593111
Alignment:
Q  134 acgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaa 233  Q
    |||||||||||||||||||||||||||||  |||| |||| |||| ||| |||||||||||| | || |||||||| |||||||||||||| ||||||||    
T  21593222 acgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacaccctgaa 21593123  T
Q  234 aaacatgctcac 245  Q
    || |||||||||    
T  21593122 aaccatgctcac 21593111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 26954674 - 26954755
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 192  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  26954674 aaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtg 26954755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 5017256 - 5017137
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| | |||||||| ||||||||  |||||||| ||  |||||| |||||||||||| ||| ||||||||||    
T  5017256 cttcaaaatctgcacaaga-acacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaa 5017158  T
Q  143 ggtacgaccaaccttatcctg 163  Q
    |||||||||||||||||||||    
T  5017157 ggtacgaccaaccttatcctg 5017137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 5407288 - 5407404
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| | |||| |||| ||||||||  |||||| ||||  ||||||||||||||||    
T  5407288 cacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5407387  T
Q  219 attggaaaccctgaaaa 235  Q
    |||||| || |||||||    
T  5407388 attggacactctgaaaa 5407404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 5411613 - 5411729
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| | |||| |||| ||||||||  |||||| ||||  ||||||||||||||||    
T  5411613 cacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5411712  T
Q  219 attggaaaccctgaaaa 235  Q
    |||||| || |||||||    
T  5411713 attggacactctgaaaa 5411729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 18234439 - 18234546
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18234439 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcct 18234538  T
Q  163 gtaaacgt 170  Q
    | ||||||    
T  18234539 gaaaacgt 18234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 31979885 - 31980056
Alignment:
Q  75 cagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcca 174  Q
    ||||||||| |||||||||  |||||||  |||  ||||| |||||||||||| ||| |||||| ||| |||||||||||||||||||| |||||||||     
T  31979885 cagtcttcaattgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgccc 31979984  T
Q  175 agcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaa-catgctcac 245  Q
    |||| |   ||||| |||||| | ||  ||||||||||| ||||||||   ||||||||||| |||||||||    
T  31979985 agcaagttgaaaattgtgtcacgtttttccaaaatcgtgacacgattgatcaccctgaaaaaccatgctcac 31980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 3050865 - 3050927
Alignment:
Q  459 taaaaaatgttgggataatttattttgtcacttgatgatgttacaccgagcggaagatattca 521  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  3050865 taaaaaatgttgggataatttatttagtcacttgatgatgttacaccgagcgggagatattca 3050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 5406750 - 5406843
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  5406750 ttctccaccttgacttgaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaactacaccaagt 5406843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 5411075 - 5411168
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  5411075 ttctccaccttgacttgaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaactacaccaagt 5411168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5413828 - 5413910
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  5413828 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5413910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 5407518 - 5407611
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || | |||||| | ||| ||||||||||||||||||| |||||||||||||    
T  5407518 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaactacaccaagt 5407611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 5411843 - 5411936
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || | |||||| | ||| ||||||||||||||||||| |||||||||||||    
T  5411843 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaactacaccaagt 5411936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 10076885 - 10076757
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    |||| |  ||||||||| ||| | || ||||||||    
T  10076885 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaatcgtatcacgttttcccaaaat 10076786  T
Q  210 cgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||| ||| ||||||  |||||| ||||||    
T  10076785 cgtatcatgattgggcaccctgcaaaaca 10076757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 201
Target Start/End: Original strand, 33160661 - 33160816
Alignment:
Q  46 tcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtca--aattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||| ||||||| ||| ||||||||||  ||||||| ||||||||  ||   ||  ||| ||| |||||||||||| ||||||||||     
T  33160661 tcaaaatctgcaaaga-acacttatatagcagtcttcagc-gtcaaaattgtgtcacgttttc-catcaatcgtgtcacgattgatgcgtacgacccaat 33160757  T
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  33160758 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 33160816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 603613 - 603719
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| ||||| ||||| ||||| ||||||||||||| |||| |||| |||| ||| |||||| ||||| | || ||||||||||||||    
T  603613 gtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtc 603712  T
Q  216 acgattg 222  Q
    |||||||    
T  603713 acgattg 603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5406578 - 5406660
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  5406578 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5406660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5410903 - 5410985
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  5410903 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5410985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 16452820 - 16452902
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | | || |||| |||||||||||||||| |||||    
T  16452820 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacgattg 16452902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 30834917 - 30834999
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  30834917 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 30834999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 31086234 - 31086114
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattg-gtcaaattgtgacacgattgatgcatacgaccca 141  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| | ||||||  |||||||  ||  | ||||| |||||||||||| ||| |||||||||    
T  31086234 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgaccca 31086136  T
Q  142 aggtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||||    
T  31086135 aggtacgaccaaccttatcctg 31086114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 3809320 - 3809407
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 223  Q
    ||||||||||||||||||||||||||||||| |||| | ||   || ||| |||||||||||| | || ||||||||||||||||||||||    
T  3809320 tacgacccaaggtacgaccaaccttatcctgaaaactttcc---caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgg 3809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 16554458 - 16554358
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 421  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||| ||||  ||||||    
T  16554458 caacatttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16554359  T
Q  422 t 422  Q
    |    
T  16554358 t 16554358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 16631014 - 16630914
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 421  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||| ||||  ||||||    
T  16631014 caacatttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16630915  T
Q  422 t 422  Q
    |    
T  16630914 t 16630914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 16652720 - 16652620
Alignment:
Q  324 caacatttctccaccttgactctaaaat-gatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaag 421  Q
    |||||||||||||||||||||  ||| | | |||||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||  ||||||    
T  16652720 caacatttctccaccttgacttcaaatttggtgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16652621  T
Q  422 t 422  Q
    |    
T  16652620 t 16652620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 5571957 - 5571846
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| ||| |||||||| ||| |||||||||||||||||||||||||| |||  ||||||||| |||| |   |||||||||||| | || | |||||||    
T  5571957 aaatcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatc 5571858  T
Q  211 gtgtcacgattg 222  Q
    ||| ||||||||    
T  5571857 gtgacacgattg 5571846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 5757173 - 5757115
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  5757173 caaatcgtgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaac 5757115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 26661506 - 26661421
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    ||||||||||||||||||||||||||||||| ||||| | | |||| | | |||||| |||||   || |||||||||||||||||    
T  26661506 tacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26661421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 26767477 - 26767392
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    ||||||||||||||||||||||||||||||| ||||| | | |||| | | |||||| |||||   || |||||||||||||||||    
T  26767477 tacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 16452712 - 16452752
Alignment:
Q  123 gattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  16452712 gattgatgcgtacgacccaaggtacgaccaaccttatcctg 16452752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 31405054 - 31405097
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  31405054 cacgattgatgcgtacgacctaaggtacgaccaaccttatcctg 31405097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 17759494 - 17759357
Alignment:
Q  151 caaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    ||||||||||||| |||| || | |||| ||| ||||| |||||| | || ||||||||||||||||| ||||  ||||| ||| |||  ||| ||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacggttgggcaccctaaaataca-actctcgacat 17759396  T
Q  251 aggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
     | ||||||||| || | | |||||||||||||| ||||    
T  17759395 tgcaaaattgtgacacgcttcacaaatcgtgtcacgatt 17759357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 23896736 - 23896793
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||| ||| |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  23896736 aaatcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 23896793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26954535 - 26954580
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  26954535 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 26954580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 34166670 - 34166584
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  34166670 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 34166584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 24543165 - 24543205
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaa 349  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  24543165 ttttgagtcactttctaacatttctccaccttgactctaaa 24543205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 224
Target Start/End: Original strand, 33211490 - 33211668
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||| |||||||||||| ||||||| ||| |||| || || ||||||||  ||||||   || ||||||| |||||| | ||| ||| ||||||||||     
T  33211490 cttcacaatctgcaaaga-acacttatatagcagtattgagctgtcaaaatcgtgtcatgttttgtcaaatcgtgacatggttggtgcgtacgacccaaa 33211588  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 224  Q
    ||||||  |||| ||||||  ||||||||| | || ||||||| || || || | ||  |||||||||||| |||||||||    
T  33211589 gtacgataaaccatatcctaaaaacgtgcccaacaagccaaaa-tcatgacacgtttttccaaaatcgtgttacgattgga 33211668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 24714730 - 24714860
Alignment:
Q  65 acttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgt 164  Q
    ||||| ||| |||||| |||  ||||||| |||||||| ||||| || || |||||||| |||   | || ||||||  |||||||||| |||||||||     
T  24714730 acttatatagcagtctccagcagtcaaaattgtgtcacgattggccatatcgtgacacggttggatcgtatgacccacagtacgaccaatcttatcctga 24714829  T
Q  165 aaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    ||||||||| |||| |   ||||||||||||    
T  24714830 aaacgtgcccagcaagttgaaaatcgtgtca 24714860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9183281 - 9183317
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  9183281 tcaaccctaaagttacctcctttgatttcccaagttt 9183317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 44 - 291
Target Start/End: Complemental strand, 6570457 - 6570210
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||| |||||||| ||||||| | |  ||| ||||||||||||||| ||||||| ||||| ||||| |||||||| ||||||| || ||||||||    
T  6570457 cttcaaaatatgcaaagaaacacttaaacaatagttttcagttgtcaaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaag 6570358  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||| ||||||||||||  ||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||  | |  |||| |||||||    
T  6570357 gtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaatcgtgtcacgattgcctaaaattgtgtcacaattggaccctcaaaaaaccatgctc 6570258  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttg 291  Q
    ||| |   | ||||| ||| || |||||||||||||||||| ||||||    
T  6570257 acggccctgcaaaatcgtgacacggtccacaaatcgtgtcacgatttg 6570210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 47676439 - 47676642
Alignment:
Q  42 ctcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    |||||||||||||||||||| ||||||| |||||||||||||  |||||||| ||||||||  ||    |||| |||||||| ||| ||| |||||||||    
T  47676439 ctcttcaaaatctgcaaaga-acacttatatatcagtcttcaactgtcaaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgaccca 47676537  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatg 240  Q
    |||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||||||||||||||||||||| |||||| |||| ||||    
T  47676538 aggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatg 47676637  T
Q  241 ctcac 245  Q
    |||||    
T  47676638 ctcac 47676642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 245
Target Start/End: Original strand, 14070142 - 14070339
Alignment:
Q  48 aaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 147  Q
    |||||| ||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| |||||||||||||||||||    
T  14070142 aaaatcggcaaaga-acacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtac 14070240  T
Q  148 gaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||||||| ||  |||| |||| |||| | | |||||||||||| | || ||||||||||||||||||||| | |||||||||| |||||||||    
T  14070241 gaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgaaaaccatgctcac 14070339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 245
Target Start/End: Original strand, 14380170 - 14380367
Alignment:
Q  48 aaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 147  Q
    |||||| ||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| |||||||||||||||||||    
T  14380170 aaaatcggcaaaga-acacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtac 14380268  T
Q  148 gaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||||||| ||  |||| |||| |||| | | |||||||||||| | || ||||||||||||||||||||| | |||||||||| |||||||||    
T  14380269 gaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgaaaaccatgctcac 14380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 4586024 - 4585824
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| ||||||| || ||||||||  |||||||| ||   ||||| |||||| | ||| ||| |||||||||||    
T  4586024 cttcaaaatctgcaaaga-acacttatataacagtctttagctgtcaaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaag 4585926  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    ||||||||||||||||  || |||| | || | || |||||||||| ||||| | || |||||||| |||||||||||||| |||||| |||||||||||    
T  4585925 gtacgaccaaccttatattgaaaacttacccaacaagccaaaaatcttgtcacgttttcccaaaatagtgtcacgattggacaccctgcaaaacatgctc 4585826  T
Q  244 ac 245  Q
    ||    
T  4585825 ac 4585824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 47674246 - 47674449
Alignment:
Q  42 ctcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    |||||||||||||||||||| |||| || ||| |||||||||| ||||||||   |||||   ||    |||| |||||||| ||| ||| ||| |||||    
T  47674246 ctcttcaaaatctgcaaaga-acacctatatagcagtcttcagctgtcaaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaaccca 47674344  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatg 240  Q
    |||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||||||||||||||||||||| |||||| |||| ||||    
T  47674345 aggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatg 47674444  T
Q  241 ctcac 245  Q
    |||||    
T  47674445 ctcac 47674449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 18126508 - 18126316
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||  |||||||  ||  |||||| |||||||| ||| ||| ||||||||||    
T  18126508 tcttcaaaatctgcaaaga-acacttatatatcagtctttagctgtcaaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaa 18126410  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    |||||||||||| |||||||| |||| |||| | || ||| |||||||| ||| | ||  ||||||||||| |||||||||| |||||| |||||    
T  18126409 ggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtatcacgtttttccaaaatcgtg-cacgattggacaccctgcaaaac 18126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 33332210 - 33332032
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||| | ||| |||||||||  ||||||||  ||||||||||||  ||||| |||||||||||| ||| |||||||||||    
T  33332210 cttcaaaatctgcaaagaaacactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaag 33332111  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||||||||||| || ||| ||||| |||| |   |||||||||||| | ||  ||||||||||| ||| ||||    
T  33332110 gtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaatcgtgtcacgtttttccaaaatcgtgacacaattg 33332032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 4538855 - 4539032
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| ||||||| || ||||||||  |||||| | || | ||||| |||||||| ||| ||| ||||| |||||    
T  4538855 cttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaag 4538954  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    |||||||||||||| ||||| |||| |||  ||||  || |||||||||||| | || ||||||||||||||||||||    
T  4538955 gtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 4539032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 46516067 - 46515911
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  || | ||||| |||||| | ||| |||||||||||||||    
T  46516067 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaag 46515969  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||  |||||||||||||||| ||||||||| | || ||||||||||||| || |||||    
T  46515968 gtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaatcgtgacacgattg 46515911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 4178563 - 4178447
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||||||||||||    
T  4178563 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  4178463 attggacgccctgaaaa 4178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 44 - 201
Target Start/End: Original strand, 2761607 - 2761763
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||||||    
T  2761607 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaag 2761705  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||| ||||||||| |||| |||| |||| ||  |||||||||||| |||||    
T  2761706 gtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaatcgtgtcacgattg 2761763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 96 - 284
Target Start/End: Original strand, 6360486 - 6360673
Alignment:
Q  96 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    |||||||||||   ||||| |||||||| ||| ||| ||||||||||| |||||||||| |||||||| |||| |||| | || ||| ||||||||||||    
T  6360486 gtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtgtca 6360585  T
Q  196 tgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtca 284  Q
     | || |||||||||||||||| |||||  |||||| |||||| |||| |||||| | ||||||| | || | | ||||||||||||||    
T  6360586 cgtttccccaaaatcgtgtcacaattgggcaccctgcaaaaca-gctctcgacattgcaaaattgcgacacgcttcacaaatcgtgtca 6360673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 23554828 - 23554712
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| | |||| |||| | | |||||||||||| | || |||||||||||||||||    
T  23554828 cacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 23554729  T
Q  219 attggaaaccctgaaaa 235  Q
    |||||| ||||||||||    
T  23554728 attggacaccctgaaaa 23554712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 221
Target Start/End: Complemental strand, 2647457 - 2647280
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||  ||| |||||||||| | ||||||  || ||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  2647457 cttcaaaatctgcacaaga-acacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 2647359  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    ||||||||||||||||||||| ||||||||| |||| |   |||||| ||||| | || |||||||||||| |||||||    
T  2647358 ggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcatgtcacgttttcccaaaatcgtgacacgatt 2647280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 27347715 - 27347594
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||| ||||| | || ||||||||||||||    
T  27347715 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtca-gttttcccaaaatcgtgtc 27347617  T
Q  216 acgattggaaaccctgaaaaaca 238  Q
    ||||||||  |||||| ||||||    
T  27347616 acgattgggcaccctgcaaaaca 27347594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 48491177 - 48491083
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| |  ||||||||||||||||||||| |||||||||||||||    
T  48491177 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaattcccttttcttttcccttgcatccaactacaccaagtag 48491083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 19495759 - 19495642
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgcc-aaaaatcgtgtcatgattgcccaaaatcgtgtcac 217  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| ||| |||||||||| || | || |||||||| |||||||    
T  19495759 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcac 19495660  T
Q  218 gattggaaaccctgaaaa 235  Q
    ||||||| ||||||||||    
T  19495659 gattggacaccctgaaaa 19495642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 245
Target Start/End: Original strand, 32358410 - 32358559
Alignment:
Q  96 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    |||||||||||   |||||  ||||||| ||| ||| ||||| ||||||||||| |||| |||||||| ||||||||| |||| ||  ||||| ||||||    
T  32358410 gtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagcaagctgaaaattgtgtca 32358509  T
Q  196 tgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
     | || ||||||||||| ||||||||||| |||||||||| |||||||||    
T  32358510 cgttttcccaaaatcgtatcacgattggataccctgaaaaccatgctcac 32358559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 224
Target Start/End: Complemental strand, 26417182 - 26416997
Alignment:
Q  43 tcttcaaaatctgcaaaga----gacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgac 138  Q
    |||||||||||||||||||     ||||||| ||| |||||||||   |||||||  ||||||| ||||| ||||| |||||||| ||| ||| ||||||    
T  26417182 tcttcaaaatctgcaaagaaattaacacttatatagcagtcttcaaccgtcaaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgac 26417083  T
Q  139 ccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 224  Q
    |||||||||||||||||||| |||| |||| || | | ||  | |||||||||||||   || |||||||||||||||| ||||||    
T  26417082 ccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaatcgtgtcacatttccccaaaatcgtgtcacaattgga 26416997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 48489228 - 48489089
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||||||| ||| ||| |||||||||| |||||||||||||||| || | |||| |||| |||||||| ||||||| | || ||| ||||    
T  48489228 caaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaaccgtgtcacgttttccctaaat 48489129  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    ||||||||| ||| | |||||| |||||| |||||||||||    
T  48489128 cgtgtcacggttgaacaccctgcaaaaca-gctcacgacat 48489089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 1113521 - 1113363
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    ||||||||||||||| ||| ||||||| ||| |||| ||||| ||||||||  |||||||  || | |||   |||||||| ||| ||| ||||||||||    
T  1113521 tcttcaaaatctgcacagaaacacttatataacagtattcagctgtcaaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaa 1113422  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||||||||||||||||||| |||  |||| | || ||| |||||||||||| |||||    
T  1113421 ggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaatcgtgtcacgattg 1113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 2389871 - 2389737
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||  ||||| ||||||||||||||||||||||||| |||||| || |||| ||  ||||||||||||   || | |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    |||||||||||||| ||||| |||| |||||||||    
T  2389771 gtgtcacgattggacaccctaaaaaccatgctcac 2389737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 43864058 - 43863945
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||||||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||| | || | ||  || |||||||||||| | || |||||||||    
T  43864058 aaattgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatc 43863959  T
Q  211 gtgtcacgattgga 224  Q
    ||||||||||||||    
T  43863958 gtgtcacgattgga 43863945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 245
Target Start/End: Original strand, 49092026 - 49092230
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggt-caaattgtgacacgattgatgcatacgaccca 141  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  || || ||||| ||| ||| |||| ||||||||| |||    
T  49092026 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatcca 49092124  T
Q  142 aggtacgaccaaccttatcctg-taaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacat 239  Q
    ||||||||||||||||||||||  |||||| || |||| |  | ||||||||||||   || |||||||||||| ||||||||   |||||| ||| |||    
T  49092125 aggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgcaaaccat 49092224  T
Q  240 gctcac 245  Q
    ||||||    
T  49092225 gctcac 49092230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 4509388 - 4509474
Alignment:
Q  305 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||||  | |||||| || ||||||||||||||||    
T  4509388 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatgttaatttaaccatcaaccaccattctcctt 4509474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 4511230 - 4511316
Alignment:
Q  305 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||||  | |||||| || ||||||||||||||||    
T  4511230 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatgttaatttaaccatcaaccaccattctcctt 4511316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 391
Target Start/End: Complemental strand, 6431448 - 6431362
Alignment:
Q  305 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||| | | |||||| || ||||||||||||||||    
T  6431448 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatactaatttaaccatcaaccaccattctcctt 6431362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 424
Target Start/End: Original strand, 47674529 - 47674628
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagta 423  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||| |  |||||| | |   |||||||||| ||||||||| ||||||||||||||    
T  47674529 caacatttctccaccttgacttcaaattgatgatgatgccactttaaccaccaaccactaattatcttttctttt-ccttgcatccaactacaccaagta 47674627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 21989245 - 21989370
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||| ||   |||||  ||||||||||| ||| || |||||||    
T  21989245 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacattttc-caaatcatgacacgattgctgcgtatgacccaa 21989342  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||| ||||||||||||| ||||||    
T  21989343 ggtacgatcaaccttatcctgaaaacgt 21989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 24515140 - 24515222
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| ||||||||| |||||| |||||    
T  24515140 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaattgtgtcacgattg 24515222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 30026393 - 30026481
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||||| |||||||||||||||||||||||| |||||||||  ||| ||  |||||||||||| | || ||||||||| |||||||||||    
T  30026393 tacgactcaaggtacgaccaaccttatcctg-aaacgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgattg 30026481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 21983645 - 21983705
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  21983645 caaatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 21983705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 35853701 - 35853626
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtc 194  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||  |||| |||| |||| |||||||||||||||    
T  35853701 cacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaaacttgcccagcaagccaaaaatcgtgtc 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 48491376 - 48491285
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||| ||| || || |||||| | || ||| |||||||||||| |||||    
T  48491376 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaatcgtgtcacgattg 48491285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 44847820 - 44847762
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  44847820 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 496365 - 496446
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 192  Q
    |||| |||||||| ||||||| |||||| |||||||   |||||||||||||| ||| ||| ||||||||||||||| ||||    
T  496365 aaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaaccgtg 496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 2479751 - 2479796
Alignment:
Q  123 gattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2479751 gattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 44011265 - 44011330
Alignment:
Q  306 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||  |||||||| || ||||||    
T  44011265 catttttgagtcacttttcaataattctccaccttgactctaaaatagtgatgatgtcaatttaac 44011330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 3050523 - 3050603
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    |||||||||||| |||||||||||||||||||||  |||||| | ||  ||| || || ||||| ||||||||||||||||    
T  3050523 cacgattgatgcgtacgacccaaggtacgaccaatattatccagaaatagtgtcatgcctgccacaaatcgtgtcatgatt 3050603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 4796362 - 4796251
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    ||||||||| ||  ||| ||| ||||| ||||||||||||||||  ||||||| ||||||||| | || |   |||||||||||| | ||  ||||||||    
T  4796362 aaattgtgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaatcgtgtcacgtttttccaaaatc 4796263  T
Q  211 gtgtcacgattg 222  Q
    ||||||||||||    
T  4796262 gtgtcacgattg 4796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38671472 - 38671517
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  38671472 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 38671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 6592917 - 6592976
Alignment:
Q  324 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  6592917 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 6592976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 18390558 - 18390617
Alignment:
Q  324 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  18390558 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 18390617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 4175357 - 4175435
Alignment:
Q  304 atcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    |||| |||||||||| ||  ||||||||||||||  ||||| |||||| ||||||||| || |||||| || |||||||    
T  4175357 atcaattttgagtcaattatcaacatttctccacaatgactttaaaataatgatgatgtcaatttaaccattaaccacc 4175435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 47264045 - 47264103
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| || ||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  47264045 caaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 79792 - 79845
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    ||||| |||||  ||||| |||||| ||||||| ||||||||||||||||||||    
T  79792 caaatcgtgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctg 79845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4586079 - 4586042
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  4586079 tcaaccctaaagttacatcctttgatttcccaagtttt 4586042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12098122 - 12098159
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  12098122 tcaaccctaaagttacctcctttgatttcccaagtttt 12098159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 25767399 - 25767436
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  25767399 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 25767436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 26214672 - 26214631
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    |||||||||||||||||||| |||| ||||||||| ||||||    
T  26214672 ttctccaccttgactctaaattgataatgatgccaatttaac 26214631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31105643 - 31105688
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||| ||||||||| ||||||    
T  31105643 tcaaccctaaagttacctcctttgatttctcaagttttcctctctt 31105688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 48491302 - 48491258
Alignment:
Q  205 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||    
T  48491302 aaaatcgtgtcacgattggacaccctgcaaaaca-gctcacgacat 48491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 48599940 - 48600044
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtc 283  Q
    |||||||||||| | || |||| ||||||||||||||||   |||||| |||||| |||| |||||| | ||||| ||| || | | |||||||||||||    
T  48599940 aaaatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaaaca-gctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtc 48600038  T
Q  284 atgatt 289  Q
    | ||||    
T  48600039 acgatt 48600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1113575 - 1113539
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  1113575 tcaaccctaaagttacttcctttgatttcccaagttt 1113539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 2759084 - 2759131
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaa 92  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||||    
T  2759084 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaa 2759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 289
Target Start/End: Original strand, 2761746 - 2761829
Alignment:
Q  205 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    |||||||||||||||||||  |||||| |||||| |||| |||||| | ||||| ||| |||| | ||||||||| |||| ||||    
T  2761746 aaaatcgtgtcacgattgggcaccctgcaaaaca-gctctcgacattgcaaaatcgtgacatgcttcacaaatcgggtcacgatt 2761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4253780 - 4253816
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  4253780 tcaaccctaaagttacctcctttgatttcccaagttt 4253816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 9189503 - 9189443
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccat 384  Q
    |||||||||||||||||||||   || ||||||||||| || |||||| || |||||||||    
T  9189503 caacatttctccaccttgacttctaattgatgatgatgtcagtttaaccatcaaccaccat 9189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18126562 - 18126526
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  18126562 tcaaccctaaagttacctcctttgatttcccaagttt 18126526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30024982 - 30025018
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  30024982 tcaaccctaaagttacctcctttgatttcccaagttt 30025018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43864162 - 43864126
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  43864162 tcaaccctaaagttacctcctttgatttcccaagttt 43864126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48489349 - 48489313
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  48489349 tcaaccctaaagttacctcctttgatttcccaagttt 48489313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 289
Target Start/End: Original strand, 36318314 - 36318559
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  || |||||||||||||||| ||| ||| |||||  ||||    
T  36318314 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaag 36318412  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgccc-aaaatcgtgtcacgattggaaaccctgaaaaacatgct 242  Q
    |||||||||||||||||||| ||||||| | |||| ||| |||||||||||| | || ||| |||||||||||||||||||| |||||| ||||||||||    
T  36318413 gtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaatcgtgtcacgtttccccaaaaatcgtgtcacgattggacaccctgcaaaacatgct 36318512  T
Q  243 cacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    | |||||| |  |||| ||| || | | |||||||||||||| ||||    
T  36318513 ctcgacattgcgaaatcgtgacacgtttcacaaatcgtgtcacgatt 36318559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 44 - 235
Target Start/End: Original strand, 34389188 - 34389379
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||||||| ||| ||||||||||    
T  34389188 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacgacccaa 34389285  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    ||||||||||||||||||||| |||||| || |||| |    |||||||||||| | || ||||||||||||||||||||||| ||||||||||    
T  34389286 ggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaa 34389379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 20522559 - 20522752
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||  ||| |||| || || ||||||||  |||||||  |||  |||||||||||||||||| ||| ||||||||||    
T  20522559 cttcaaaatctgcagaaga-acacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaa 20522657  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || | |||||||||| ||||||||   ||||||||||||    
T  20522658 ggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctgaaaaac 20522752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 2837149 - 2837341
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||| | |||||| ||||||| ||| |||||||||| ||||||||  |||| ||  ||   |||||  ||||||| ||| ||| |||||||||||    
T  2837149 cttcaaaatttacaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaag 2837247  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    |||||||||||||||||||| |||| | || |||| |   |||||||||||| | || ||||||||||||||||||||||| |||||| |||||    
T  2837248 gtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaac 2837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 21630301 - 21630460
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| ||||||| || ||||||||  |||||||  |||  ||||| |||||||||||| ||  |||||||||| |||||||||||||||||||    
T  21630301 acacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcct 21630400  T
Q  163 gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    | ||||||||| |||| |   |||||||||||||| || |||||||| ||| ||||||||    
T  21630401 gaaaacgtgcccagcaagttgaaaatcgtgtcatgttttcccaaaattgtgacacgattg 21630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 33528384 - 33528182
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||| ||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  33528384 cttcaaaatctgcacaaga-acacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 33528286  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgc 241  Q
    ||||||| ||||||||| ||| |||||| || |||| |    |||||||||||| | || |||||||||||| ||||||||   |||||| ||| |||||    
T  33528285 ggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgc 33528186  T
Q  242 tcac 245  Q
    ||||    
T  33528185 tcac 33528182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 40015314 - 40015420
Alignment:
Q  115 tgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgt 214  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||| || ||||||| ||| ||||||||||||||||||| |||||| ||||||  |||    
T  40015314 tgtgtcacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaacgtgtcaatcatgccaaaaatcgtgtcacgattgctcaaaattatgt 40015413  T
Q  215 cacgatt 221  Q
    |||||||    
T  40015414 cacgatt 40015420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 36988459 - 36988571
Alignment:
Q  124 attgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| |||| |||| | | |||||||||||| | || ||||||||| |||||||||||    
T  36988459 attgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattg 36988558  T
Q  223 gaaaccctgaaaa 235  Q
    || ||||||||||    
T  36988559 gacaccctgaaaa 36988571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 45099543 - 45099427
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| |||||  |||||||||||||||||||||||| ||| | |||| |||| ||||||||||||||||  ||| |||||||| ||||||||    
T  45099543 cacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgtgtcacg 45099444  T
Q  219 attggaaaccctgaaaa 235  Q
    |||||| ||||| ||||    
T  45099443 attggacaccctaaaaa 45099427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 33118471 - 33118665
Alignment:
Q  43 tcttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    ||||||||||||||| |||| ||||||| ||| |||||||||||||||||||  ||||||   |||  ||||| |||||||||||| ||| |||||||||    
T  33118471 tcttcaaaatctgcacaaga-acacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgaccca 33118569  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||||| ||||||||||| || ||| ||||| |||| |   ||||| |||||| | || || |||| |||| ||||||||   ||||||||||||    
T  33118570 aggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaattgtgtcacgttttcctaaaaacgtgacacgattgagcaccctgaaaaac 33118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 39483235 - 39483407
Alignment:
Q  66 cttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgta 165  Q
    |||| ||| |||||||||| |||||||| |||| |||  |||  ||||| |||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaa 39483334  T
Q  166 aacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||| || | || |    |||||||||||| | || |||||||||||| ||||||||   ||||||||||||    
T  39483335 aacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaac 39483407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 2334787 - 2334879
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| ||| |||||||||||  ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  2334787 caaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 2334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 5723634 - 5723716
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | || | |||| |||||||||||||||| |||||    
T  5723634 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtcacgattg 5723716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 23078231 - 23078106
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||  |||||||| ||||||||  ||   ||||| ||| |||||||| ||| ||||||||||    
T  23078231 cttcaaaatctgcacaaga-acacttatatagcagtcttcaactgtcaaaattgtgtcacgttttc-caaatcgtggcacgattggtgcgtacgacccaa 23078134  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    | ||||||||||||||||||| ||||||    
T  23078133 gatacgaccaaccttatcctgaaaacgt 23078106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 4503516 - 4503594
Alignment:
Q  124 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  4503516 attgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 4503594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 28258872 - 28258814
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28258872 caaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 6595398 - 6595490
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgt-gccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    ||||||| |||||||||||| |||  | ||| |||| |||||||||||||||| | || |||||||| |||||||||||||| ||||||||||    
T  6595398 gtacgactaaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacaccctgaaaa 6595490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 17057674 - 17057737
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 108  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  17057674 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaaatgtgtcacgattgg 17057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 17085657 - 17085720
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 108  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  17085657 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaaatgtgtcacgattgg 17085720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 17865589 - 17865640
Alignment:
Q  119 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  17865589 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 17865640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 34907585 - 34907635
Alignment:
Q  456 tgttaaaaaatgttgggataatttattttgtcacttgatgatgttacaccga 507  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  34907585 tgttaaaaaatgttgggataattta-ttagtcacttgatgatgttacaccga 34907635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 39284661 - 39284574
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg 231  Q
    |||||||||||||||||||| |||| | || |||| ||| ||||| |||||| | || ||||||||||||||||||| ||| ||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgataggacaccctg 39284574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 14698750 - 14698600
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| |||||||||  | ||||||  |||||||  |||  ||||| |||| | | ||| ||| ||||||||||||||||||||||||||||||    
T  14698750 acacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaaggtacgaccaaccttatcct 14698651  T
Q  163 gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtg 213  Q
    | ||| ||||| | || |   |||||||||||| | || ||||||||||||    
T  14698650 gaaaatgtgcccaacaagttgaaaatcgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 45726530 - 45726469
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||||||   ||||||||||||||||||| |||||| |||||||||| |||||||||    
T  45726530 aaaatcgtgtcacatttgcccaaaatcgtgtcacaattggacaccctgaaaatcatgctcac 45726469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 10707013 - 10706895
Alignment:
Q  43 tcttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    ||||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||  ||| |||||||| ||  |||||||||    
T  10707013 tcttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaaccgtggcacgattggtgtgtacgaccca 10706916  T
Q  142 aggtacgaccaaccttatcct 162  Q
    |||||||||||||||||||||    
T  10706915 aggtacgaccaaccttatcct 10706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 17863955 - 17863855
Alignment:
Q  146 acgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctca 244  Q
    |||||||||||||||||  ||| | |||| |||| |  ||||||||||||| | || ||||||||  ||||||||||||| |||||||||| ||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgattggacaccctgaaaaccatgctca 17863856  T
Q  245 c 245  Q
    |    
T  17863855 c 17863855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 29867644 - 29867552
Alignment:
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    |||| |||||||||||| || ||| | |||| |||| | | |||||||||||| | || ||||||||||||||||||||||| ||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaa 29867552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 8389909 - 8389790
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||| ||  ||||||| ||| |||||||||| | ||||||  ||||||   ||   |||||  ||||| ||||| ||| |||||||||||    
T  8389909 cttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaag 8389810  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||| ||||||||||||||    
T  8389809 gtacgtccaaccttatcctg 8389790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11151841 - 11151886
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  11151841 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 11151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11690419 - 11690374
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  11690419 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 11690374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14202657 - 14202702
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||    
T  14202657 tcaaccataaagttacctcatttgatttcccaagttttcctctctt 14202702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 245
Target Start/End: Original strand, 35447477 - 35447606
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||| || |||| ||||   ||  || | ||||||||||   || |||||||||||||     
T  35447477 gtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccgacaaaccgataatcgtgtcacattttcccaaaatcgtgtt 35447576  T
Q  216 acgattggaaaccctgaaaaacatgctcac 245  Q
    || |||| | ||||||||||  ||||||||    
T  35447577 acaattgaacaccctgaaaacaatgctcac 35447606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 36206049 - 36206126
Alignment:
Q  124 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    |||||||| ||| | ||||||||||||||||||||||||| ||| | | || |||| |||||||||||||||| ||||    
T  36206049 attgatgcgtacaatccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacgatt 36206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42362270 - 42362225
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  42362270 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 42362225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 13569686 - 13569785
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| |||  ||||||||| ||||||||  |||||| | ||   ||||| |||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  13569686 acacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcct 13569784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 387
Target Start/End: Original strand, 31056675 - 31056751
Alignment:
Q  311 ttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct 387  Q
    |||||||| ||| |||||||||||||||||||||||||| || || ||||| || |||||  || ||||||| ||||    
T  31056675 ttgagtcaattttcaacatttctccaccttgactctaaattggtggtgatgtcaatttaatcatcaaccacctttct 31056751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 38312103 - 38312040
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 108  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  ||||||| |||||    
T  38312103 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgattgg 38312040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 723994 - 724032
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttc 39  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  723994 tcaaccctaaagttacctcctttgatttcccaagttttc 724032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 14634083 - 14634121
Alignment:
Q  8 taaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  14634083 taaagttacctcctttgatttcccaagttttcttctctt 14634121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34140021 - 34140066
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  34140021 tcaaccctaaagttacctcctttgattttccaagttttcctctctt 34140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 39284748 - 39284700
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaa 93  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  39284748 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaa 39284700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2334667 - 2334703
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  2334667 tcaaccctaaagttacctcctttgatttcccaagttt 2334703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11067210 - 11067174
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||||||||||||| |||||||||||||| |||||    
T  11067210 tcaaccataaagttacctcctttgatttccctagttt 11067174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36318259 - 36318295
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  36318259 tcaaccctaaagttacctcctttgatttcccaagttt 36318295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39284803 - 39284767
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  39284803 tcaaccctaaagttacctcctttgatttcccaagttt 39284767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 44 - 289
Target Start/End: Complemental strand, 49918212 - 49917969
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||| ||   ||||| |||||||||||| ||  |||||||||||    
T  49918212 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaag 49918114  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    ||| |||||||||||||||| ||||||||| |||| |  ||||||||||||| | ||  | |||||||||||||||||||  |||||| |||||| ||||    
T  49918113 gtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaatcgtgtcacgattgggcaccctgcaaaaca-gctc 49918015  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
     |||||| | ||||||||| || | | |||||||||||||| ||||    
T  49918014 tcgacattgcaaaattgtgacacgcttcacaaatcgtgtcacgatt 49917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 44 - 289
Target Start/End: Original strand, 4552952 - 4553197
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||| |||||||  || | ||||| |||||||| ||||||| |||||| || |    
T  4552952 cttcaaaatctgcaaagaaacacttatataacagtcttcagctgtcaaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacg 4553051  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
     |||||| |||||||||||| ||||||| ||| || | | |||||| | ||| | || | ||||||||||||||||||||| |||||| |||||||| ||    
T  4553052 atacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaatcatatcacgttttctcaaaatcgtgtcacgattggataccctgcaaaacatgttc 4553151  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    ||| ||| |  |||| ||| || | | |||||||||||||| ||||    
T  4553152 acggcattgcgaaatcgtgacacgcttcacaaatcgtgtcacgatt 4553197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 89 - 250
Target Start/End: Original strand, 37033636 - 37033797
Alignment:
Q  89 caaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaat 188  Q
    ||||| |||||||| |||   ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| ||||  ||| | | |||||    
T  37033636 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaat 37033735  T
Q  189 cgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    ||||||||| || || |||||||||||||||||||| |||||| ||||||||||||||||||    
T  37033736 cgtgtcatgtttcccgaaaatcgtgtcacgattggacaccctgcaaaacatgctcacgacat 37033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 31659099 - 31658908
Alignment:
Q  46 tcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggt 145  Q
    |||||||||||||||| ||||||| ||| |||||||||  ||||||||  |||||||| ||   ||||| |||||||| ||| ||| |||||||||||||    
T  31659099 tcaaaatctgcaaaga-acacttatatagcagtcttcaactgtcaaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggt 31659001  T
Q  146 acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    || ||||||||||||||| |||| | || |||| || |||||| |||||| | || ||||||||||||||||||||||  |||||| ||||||    
T  31659000 acaaccaaccttatcctgaaaactttcccagcaagcaaaaaattgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaaca 31658908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 16455464 - 16455332
Alignment:
Q  90 aaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatc 189  Q
    ||||| ||||||| ||||| ||||| ||| |||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||| ||| |||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgccaaacataccaaaaatc 16455365  T
Q  190 gtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
     ||||| |||||| ||||||||| |||||||||    
T  16455364 atgtcacgattgctcaaaatcgtatcacgattg 16455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 44 - 221
Target Start/End: Complemental strand, 3156729 - 3156554
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||||| ||||| ||  || | ||||  |||||||| ||| ||  || || |||||    
T  3156729 cttcaaaatctgcaaaga-acacttatataacagtcttcagctgtcaaaattgtgttacgttttgccaaacggtgacacgtttggtgtgtatga-ccaag 3156632  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    |||||||||||||||||||| ||||||| | ||||  ||||||||||||| ||| || ||||||||||||||||||||    
T  3156631 gtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatt 3156554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 46064763 - 46064631
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| |||||||||| ||||||||  ||| ||  ||||| ||||| ||| |||| ||||| | |||||||||||||||||||||| |||||||    
T  46064763 acacttaaataacagtcttcagctgtcaaaatcgtgacatgattggccaaatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcct 46064664  T
Q  163 gtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    | ||| |||||||||||||||||||||||||||    
T  46064663 gaaaatgtgccaagcatgccaaaaatcgtgtca 46064631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 10925086 - 10924893
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  || | ||||| |||||||| ||||||| || ||||||||    
T  10925086 cttcaaaatctgcaaaga-acacttatataacagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaag 10924988  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||| ||||||| ||||  || |||| |||| | || ||| ||||||||||||   ||  |||||||||||||||||||||  |||||| ||||||    
T  10924987 gtatgaccaactttattttgaaaacttgcctaccaagccgaaaatcgtgtcacatttttccaaaatcgtgtcacgattgggtaccctgcaaaaca 10924893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 424
Target Start/End: Complemental strand, 776866 - 776751
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 408  Q
    ||||||| ||| || |||||||||||||||||||||||||| ||||| |||||  |||||||| || ||||||||||||||||||   || |||||||||    
T  776866 ttttgagacacatttcaacatttctccaccttgactctaaattgatggtgatggaactttaaccatcaaccaccattctccttttgcatttccttgcatc 776767  T
Q  409 taactacaccaagtag 424  Q
     |||||||||||||||    
T  776766 caactacaccaagtag 776751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 13598737 - 13598863
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||| ||| ||| |||||||||| ||||||||  |||||||  |||  |||||||||||||||||| ||| ||||||||||    
T  13598737 cttcaaaatctgcacaaga-acatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaa 13598835  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||||||||||||||| ||||||    
T  13598836 ggtacgaccaaccttatcctgaaaacgt 13598863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 238
Target Start/End: Original strand, 28223726 - 28223920
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   |||||||||||||| ||  ||| |||||||||||    
T  28223726 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaag 28223824  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||||||||||||||||| |  | || || |  || | ||| |||||||||||| | || ||||||||||||||||||||||  |||||| ||||||    
T  28223825 gtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaaca 28223920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 11348298 - 11348121
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| ||||| |||| |||||||||||||||||||| |||| |||| | || ||| |||||||||||| | ||  ||||||||    
T  11348298 aaatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatc 11348199  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    ||||||||||| || |||||| |||||| |||| |||||| | ||||| ||| || | | |||||||||||||| ||||    
T  11348198 gtgtcacgattagacaccctgcaaaaca-gctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 11348121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 20762460 - 20762344
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| | ||| | ||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||||||||||||    
T  20762460 cacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 20762361  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  20762360 attggacgccctgaaaa 20762344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 238
Target Start/End: Original strand, 28220531 - 28220725
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||  ||| |||||||||||    
T  28220531 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaag 28220629  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||||||||||||||||| |  | || || |  || | ||| |||||||||||| | || ||||||||||||||||||||||  |||||| ||||||    
T  28220630 gtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaaca 28220725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 44454957 - 44454843
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||  ||| ||||||||||||||| |||||||||||| || |||| |||| |||| ||| |||||||||||| | || ||||||||    
T  44454957 caaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgtttccccaaaat 44454858  T
Q  210 cgtgtcacgattgga 224  Q
    |||||||||||||||    
T  44454857 cgtgtcacgattgga 44454843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 309 - 424
Target Start/End: Original strand, 50167718 - 50167839
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctttt-cttttc-----cct 402  Q
    ||||||| ||| || |||||||||||||||||||||||||| ||||| |||||  |||||||| || |||||||||||||||||| ||||||     |||    
T  50167718 ttttgagacacatttcaacatttctccaccttgactctaaattgatggtgatgaaactttaaccatcaaccaccattctccttttccttttccttttcct 50167817  T
Q  403 tgcatctaactacaccaagtag 424  Q
    |||||| |||||||||||||||    
T  50167818 tgcatccaactacaccaagtag 50167839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 37070104 - 37070283
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| ||||||| || |||||||| | |||||| |||   ||||| ||| |||||||| ||| ||||||||||    
T  37070104 cttcaaaatctgcacaaga-acacttatatagcagtctttagctgtcaaaattatgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaa 37070202  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||||||||||||||| |||||| || | || |    |||||||||||| | || |||||||||||| ||||||||    
T  37070203 ggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 37070283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 3189150 - 3189023
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 207  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3189150 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3189051  T
Q  208 atcgtgtcacgattggaaaccctgaaaa 235  Q
    || ||||||||||||||  |||||||||    
T  3189050 attgtgtcacgattggacgccctgaaaa 3189023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 3197967 - 3197840
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 207  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3197967 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3197868  T
Q  208 atcgtgtcacgattggaaaccctgaaaa 235  Q
    || ||||||||||||||  |||||||||    
T  3197867 attgtgtcacgattggacgccctgaaaa 3197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 3206785 - 3206658
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 207  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3206785 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3206686  T
Q  208 atcgtgtcacgattggaaaccctgaaaa 235  Q
    || ||||||||||||||  |||||||||    
T  3206685 attgtgtcacgattggacgccctgaaaa 3206658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 29652150 - 29652269
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||| | | ||||||| ||| |||||||||| ||||||||   ||||||  |||  ||||| |||||||||||| ||  |||||||||||    
T  29652150 cttcaaaatctgcacaaaaacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaag 29652249  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||    
T  29652250 gtacgaccaaccttatcctg 29652269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 1833384 - 1833205
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||||||| | ||||| |||  ||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||| ||||||||    
T  1833384 ttcaaaatctgcaaaga-atacttatataggagtcttcagctgtcaaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaagg 1833286  T
Q  145 tacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 224  Q
    || ||||||||||||| ||  ||| || |  |||| |||||||||||||| ||| || |||||||||||||||| ||||||    
T  1833285 tatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaatcgtgttatgttttcccaaaatcgtgtcaccattgga 1833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 30476753 - 30476908
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||  |||||||||||    
T  30476753 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaag 30476851  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    || | |||||||||||| || |||| |||| ||||  || |||||||||||| ||||    
T  30476852 gttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaatcgtgtcacgatt 30476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 13316698 - 13316779
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| ||||    
T  13316698 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatt 13316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 391
Target Start/End: Original strand, 13547837 - 13547922
Alignment:
Q  307 atttttgagtcactttg-caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    ||||||||||||| ||  ||||| |||||||| |||||||||||||||||||||||| | |||||| || ||||||||||||||||    
T  13547837 atttttgagtcacattctcaacaattctccacattgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctt 13547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 3282044 - 3282222
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||  |||||| ||| |||||||| ||| ||||||||||    
T  3282044 cttcaaaatctgcataaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-tcaaatcgtggcacgattggtgcgtacgacccaa 3282141  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||| ||||||||||||| || |||||| || |||| |    |||||||||||| | || | |||||||||| ||||||||    
T  3282142 ggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattg 3282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 29135847 - 29135763
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||  |||||| |||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtca 29135763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 193184 - 193057
Alignment:
Q  118 gacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcac 217  Q
    |||||| ||| ||| ||||||||||||||||||||| ||||||||  |||| |||| |||| ||| ||||| || ||| | ||  ||||||| ||||||     
T  193184 gacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgtttttccaaaattgtgtcat 193085  T
Q  218 gattggaaaccctgaaaaacatgctcac 245  Q
    ||||||| |||||| ||| |||||||||    
T  193084 gattggacaccctgcaaaccatgctcac 193057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 21536330 - 21536205
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| | | |||||||| ||| ||||||||||    
T  21536330 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcggggcacgattggtgcgtacgacccaa 21536233  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    |||||||||||||| |||||| ||||||    
T  21536232 ggtacgaccaacctcatcctgaaaacgt 21536205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 22819819 - 22819918
Alignment:
Q  96 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    ||||||| |||||  ||||||||  ||| | ||||| ||||||||||||||||||||| ||||| ||| ||||||| ||| ||||| ||||||| |||||    
T  22819819 gtgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtca 22819918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 13604317 - 13604259
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  13604317 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 28221484 - 28221542
Alignment:
Q  366 tttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||| || |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  28221484 tttaaccatcaaccaccatgatccttttcttttcccttgcatccaactacaccaagtag 28221542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 414
Target Start/End: Complemental strand, 41360545 - 41360441
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 408  Q
    |||||||||| ||| |||||||||||||||||||||||||  ||||| ||||| ||  ||||| || |||||||||||| || ||| | | |||||||||    
T  41360545 ttttgagtcaattttcaacatttctccaccttgactctaatttgatggtgatgtca-attaaccatcaaccaccattcttctcttcatattccttgcatc 41360447  T
Q  409 taacta 414  Q
     |||||    
T  41360446 caacta 41360441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 424
Target Start/End: Complemental strand, 31658812 - 31658721
Alignment:
Q  333 tccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagtag 424  Q
    ||||||||| ||  ||| ||||||||||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||||||||||||    
T  31658812 tccaccttgccttcaaattgatgatgatgtcactttaaccatcaaccaccaatcccccttttcttttcc-ttgcatccaactacaccaagtag 31658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 19753969 - 19753902
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    ||||| |||| |||||||||| ||||||||||||||| | | |||||| || ||||||||||||||||    
T  19753969 caacaattcttcaccttgactataaaatgatgatgatcctaatttaaccatcaaccaccattctcctt 19753902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 13547677 - 13547766
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||  || ||||||||| |||| ||  ||||| |||||| ||||    
T  13547677 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacgatt 13547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 13549588 - 13549677
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||  || ||||||||| |||| ||  ||||| |||||| ||||    
T  13549588 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacgatt 13549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 928228 - 928265
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||||||||||||| |||||||||||||||||||||    
T  928228 tcaaccataaagttacctcctttgatttcccaagtttt 928265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 15820090 - 15820053
Alignment:
Q  125 ttgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcct 15820053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40122448 - 40122485
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||||||||||||| |||||||||||||||||||||    
T  40122448 tcaaccataaagttacctcctttgatttcccaagtttt 40122485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 13659696 - 13659782
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  13659696 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 13659782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 47703404 - 47703333
Alignment:
Q  311 ttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    |||||||| ||| |||||||| ||||||||||||||||| || || ||||| || |||||| || |||||||    
T  47703404 ttgagtcaatttacaacatttatccaccttgactctaaattggtggtgatgtcaatttaaccatcaaccacc 47703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 834417 - 834459
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatct 43  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||    
T  834417 tcaaccctaaagttacctcctttgatttcccaagtttttatct 834459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 3847378 - 3847416
Alignment:
Q  8 taaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  3847378 taaagttacctcctttgatttcccaagttttcctctctt 3847416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 31928443 - 31928509
Alignment:
Q  325 aacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    |||| |||||||||||||||||||| | ||| |||||||| |||||| || ||||||| | ||||||    
T  31928443 aacaattctccaccttgactctaaatttatggtgatgccaatttaaccatcaaccaccttgctcctt 31928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 37503859 - 37503916
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcac 102  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||| ||||  |||||||    
T  37503859 cttcaaaatctgcaaaga-acacttatatatcagtcttcagctgtaaaaatcgtgtcac 37503916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 197158 - 197203
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  197158 tcaaccctaaagttacctcctttgattttccaagttttcctctctt 197203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13138224 - 13138261
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  13138224 tcaaccctaaagttacctcctttgatttcccaagtttt 13138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 16124327 - 16124294
Alignment:
Q  137 acccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||||||||||||||||||||| ||||||    
T  16124327 acccaaggtacgaccaaccttatcctgaaaacgt 16124294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3156784 - 3156748
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  3156784 tcaaccctaaagttacctcctttgatttcccaagttt 3156748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3189249 - 3189213
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  3189249 tcaaccctaaagttacctcctttgatttcccaagttt 3189213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3198066 - 3198030
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  3198066 tcaaccctaaagttacctcctttgatttcccaagttt 3198030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3206905 - 3206869
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  3206905 tcaaccctaaagttacctcctttgatttcccaagttt 3206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 9986931 - 9986895
Alignment:
Q  185 aaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  9986931 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 9986895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 13659595 - 13659631
Alignment:
Q  10 aagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  13659595 aagttacctcctttgatttcccaagttgtcatctctt 13659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28220476 - 28220512
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28220476 tcaaccctaaagttacctcctttgatttcccaagttt 28220512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28223671 - 28223707
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28223671 tcaaccctaaagttacctcctttgatttcccaagttt 28223707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31659156 - 31659120
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  31659156 tcaaccctaaagttacctcctttgatttcccaagttt 31659120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49918267 - 49918231
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  49918267 tcaaccctaaagttacctcctttgatttcccaagttt 49918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 29812927 - 29812725
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||  |||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||||||||    
T  29812927 tcttcaaaatctacaaaga-acacttatatagcagtcttcagcggtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaa 29812829  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgc 241  Q
    ||||||||||||||||||||| |||| |||| |||| | |||||||||||||| | || ||||||||||||||||||||||| |||||| |||| |||||    
T  29812828 ggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgc 29812729  T
Q  242 tcac 245  Q
    ||||    
T  29812728 tcac 29812725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 133 - 424
Target Start/End: Complemental strand, 44331344 - 44331052
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctga 232  Q
    ||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||   || ||||||||||||||||||||| | |||| |     
T  44331344 tacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacgattgaacacccagc 44331245  T
Q  233 aaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgctc--aaatcatttttg-agtcactttgcaacat 329  Q
    ||||||| ||||| |||| |  |||| ||| || |||   |||| ||||||| ||||  | || | |||  || ||| ||| | || || |   || ||     
T  44331244 aaaacatactcacaacattgcgaaatcgtgacacggttgccaaagcgtgtcacgattcttcactttctccaaactcaatttagaaggca-taaacagca- 44331147  T
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  44331146 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctccttttcttttcccttgtatccaactacaccaagtag 44331052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 49200040 - 49200175
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||  ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||| |||    
T  49200040 aaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatc 49200139  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacg 246  Q
    |||||||||||||| |||||| ||||||||||||||    
T  49200140 gtgtcacgattggacaccctgcaaaacatgctcacg 49200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 40734361 - 40734243
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||||| ||||||||  |||  ||||| |||||||||||||||| ||||| |||||    
T  40734361 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgatccaag 40734263  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||    
T  40734262 gtacgaccaaccttatcctg 40734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 4569525 - 4569400
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||||||| ||||    
T  4569525 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtc 4569426  T
Q  216 acgattggaaaccctgaaaaacatgc 241  Q
    ||||||||| ||||| |||| |||||    
T  4569425 acgattggacaccctaaaaaccatgc 4569400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 46173307 - 46173179
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||||||| || ||||||||||||||    
T  46173307 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagcc-ggaatcgtgtcatgttttcccaaaatcgtgtc 46173209  T
Q  216 acgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||| |||||| ||| |||||||||    
T  46173208 acgattggacaccctgcaaaccatgctcac 46173179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 7762052 - 7761937
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| | || |||||||||||||||||    
T  7762052 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgtgtcacg 7761954  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  7761953 attggacgccctgaaaa 7761937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 31340631 - 31340766
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatg-attgcccaaaat 209  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| | || ||| ||||||||||||||  || ||||||||    
T  31340631 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatgtttttcccaaaat 31340730  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    | ||||||||||||| |||||||||| |||||||||    
T  31340731 catgtcacgattggacaccctgaaaaccatgctcac 31340766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 29810732 - 29810539
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||| |||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||||||||    
T  29810732 tcttcaaaatatgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaa 29810634  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||||||||||||||||||| |||  || | |||| ||||||||| |||  | | ||  | |||||||||||||||||||| |||||| |||||    
T  29810633 ggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaattgtgctacgtttttctaaaatcgtgtcacgattggacaccctgcaaaac 29810539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 7764240 - 7764124
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| | || |||||||||||||||| | || |||||||||||||||||    
T  7764240 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 7764141  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  7764140 attggacgccctgaaaa 7764124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 9636508 - 9636624
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | || | | || ||||||||||||||||||||| ||||||||| |||||||    
T  9636508 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatttcccaaaatcatgtcacg 9636607  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  9636608 attggacgccctgaaaa 9636624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 89 - 245
Target Start/End: Original strand, 55302532 - 55302687
Alignment:
Q  89 caaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaat 188  Q
    ||||| |||||||| |||   ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||    
T  55302532 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaat 55302631  T
Q  189 cgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||| ||| | || ||| ||||||||||||||||| | ||||||||||  ||||||||    
T  55302632 cgtatcacgttttccc-aaatcgtgtcacgattgaacaccctgaaaacaatgctcac 55302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 289
Target Start/End: Complemental strand, 54593284 - 54593106
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || ||||||||    
T  54593284 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaat 54593185  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
     | |||||||||| | ||| |||||| |||||||||  | || |||||| ||| |||||| || ||||||| ||||||||    
T  54593184 tgagtcacgattgaataccatgaaaaccatgctcactgccta-gaaaatcgtgccatggttcataaatcgtatcatgatt 54593106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 8126967 - 8127145
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||| | ||||||| ||| |||||||||  ||||||||  |||||||  |||  ||||| |||||||| ||| ||  |||||||||||    
T  8126967 cttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaag 8127066  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
     ||||||||||||||||||| |||||| || |||| |   ||||||||||||   || |||||||||||| ||||||||    
T  8127067 atacgaccaaccttatcctgaaaacgtacctagcaagttgaaaatcgtgtcacactttcccaaaatcgtgacacgattg 8127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 43 - 192
Target Start/End: Complemental strand, 24694916 - 24694767
Alignment:
Q  43 tcttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    ||||||||||||||| |||| ||||||| ||| |||||||||||||||||||  |||| ||  |||  ||||| |||||||||||| ||| ||| |||||    
T  24694916 tcttcaaaatctgcacaaga-acacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaaccca 24694818  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 192  Q
    |||||||||||||||||||||| ||||||| | |||| |  ||||||||||    
T  24694817 aggtacgaccaaccttatcctgaaaacgtgtccagcaagttaaaaatcgtg 24694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 34490811 - 34490634
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| |||| |  | ||| |||||||||||| | ||  ||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatc 34490712  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    |||||||||||||| |||||| ||||||| ||| |||||| |  |||| ||| || |||   |||||||||||||||||    
T  34490711 gtgtcacgattggataccctgcaaaacat-ctctcgacattgcgaaatcgtgacacggttgccaaatcgtgtcatgatt 34490634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 40592530 - 40592353
Alignment:
Q  45 ttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||||||| |||| ||||||| ||| | |||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||  ||||| |||||    
T  40592530 ttcaaaatctgcacaaga-acacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaag 40592432  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||||||||||||||||||| ||||||| | |||| |   |||||||||||| | || |||||||||||| ||||||||    
T  40592431 gtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 40592353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 43404321 - 43404433
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||||| |||| |||  |||| ||| |||||||||||| | || ||||||||    
T  43404321 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgtttccccaaaat 43404420  T
Q  210 cgtgtcacgattg 222  Q
    |||||||||||||    
T  43404421 cgtgtcacgattg 43404433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 45094952 - 45094836
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||| ||||||||    
T  45094952 cacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgtgtcacg 45094853  T
Q  219 attggaaaccctgaaaa 235  Q
    ||||||  |||||||||    
T  45094852 attggacgccctgaaaa 45094836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 47923653 - 47923534
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| || ||||||||||||||||  |||||||  |||  ||||| |||||||||||||||| ||| ||||||    
T  47923653 cttcaaaatctgcacaaga-acacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaa 47923555  T
Q  143 ggtacgaccaaccttatcctg 163  Q
    |||||||||||||||||||||    
T  47923554 ggtacgaccaaccttatcctg 47923534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 5236827 - 5236941
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| | || |||| ||| |||||||||||| | || ||||||||    
T  5236827 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaatcgtgtcacgttttcccaaaat 5236926  T
Q  210 cgtgtcacgattgga 224  Q
     ||||||||||||||    
T  5236927 tgtgtcacgattgga 5236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 5258531 - 5258629
Alignment:
Q  127 gatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 224  Q
    ||||| |||||  |||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  5258531 gatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattgga 5258629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 44331752 - 44331953
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||| | |||| || ||| |||||||||| ||||||||   || |||  ||   ||||| |||||||  ||| ||  |||||||||||    
T  44331752 cttcaaaatctgcaaata-acacatatatagcagtcttcagctgtcaaaatcatgccacgtttccccaaatcgtgacacatttggtgtgtacgacccaag 44331850  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    ||||||| ||| ||||| || |||||| || || | |||||||||||||||| | ||  |||||||||||||||||||||| |||||| ||||||| |||    
T  44331851 gtacgactaactttatcttgaaaacgtacccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatactc 44331950  T
Q  244 acg 246  Q
    |||    
T  44331951 acg 44331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 43402365 - 43402490
Alignment:
Q  97 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 196  Q
    ||||||||||   ||||| |||||||| ||| ||| ||||||||||| ||| ||||||||||||||| |||| |||| |||| ||| ||||||||||||     
T  43402365 tgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcac 43402464  T
Q  197 gattgcccaaaatcgtgtcacgattg 222  Q
    | ||  ||||||||||||||||||||    
T  43402465 gtttctccaaaatcgtgtcacgattg 43402490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 1736053 - 1735863
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||| ||||||    
T  1736053 cttcaaaatctgcataaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaa 1735955  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    ||||||||||||||||||||  ||| ||| ||  || |   |||||||||||| | || |||||||||||| ||||||||   ||||||||||    
T  1735954 ggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaatcgtgtcacgttttcccaaaatcgtg-cacgattgagcaccctgaaaa 1735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 245
Target Start/End: Complemental strand, 8370239 - 8370037
Alignment:
Q  43 tcttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccca 141  Q
    ||||||||||||||| |||| || |||| ||| |||||||||||||||||||  |||||||  ||   ||||| |||||||||||| ||| ||| |||||    
T  8370239 tcttcaaaatctgcacaaga-acgcttatatagcagtcttcagttgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacaaccca 8370142  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatg 240  Q
    |||||||||||||||||||||  |||||| || ||| ||    |||||||||||| | || |||||||||||| ||||||||   |||||| ||| ||||    
T  8370141 aggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatg 8370042  T
Q  241 ctcac 245  Q
    |||||    
T  8370041 ctcac 8370037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 424
Target Start/End: Complemental strand, 29812645 - 29812547
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagta 423  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| || ||||||||||| ||||||||| ||||||||||||||    
T  29812645 caacatttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatc-ccttttctttt-ccttgcatccaactacaccaagta 29812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 36029430 - 36029556
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| |||||||| ||||||||  ||    |||  |||||||||||| ||| ||||||||||    
T  36029430 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaa 36029528  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||||||||||||||| ||||||    
T  36029529 ggtacgaccaaccttatcctgaaaacgt 36029556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 6096188 - 6096322
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||  ||| ||| ||||||||||||||||||||||||||||||| |||  || | |  | ||| |||||||||||| | || ||||||||    
T  6096188 caaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacgttttcccaaaat 6096287  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctca 244  Q
    |||||||| |||||| |||||| ||| ||||||||    
T  6096288 cgtgtcacaattggacaccctgcaaaccatgctca 6096322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 250
Target Start/End: Original strand, 23410639 - 23410840
Alignment:
Q  48 aaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 147  Q
    |||| ||||||||| ||||||| ||| |||||||||| |||||||  ||||||||  || | ||||| |||||||| ||| ||   || |||||||||||    
T  23410639 aaaaactgcaaagaaacacttatatagcagtcttcagctgtcaaat-tgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtac 23410737  T
Q  148 gaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacga 247  Q
    |||||| |||||| || ||||||  ||||||    |||||| ||| || | ||  ||||||| |||||||||||||| |||||| ||||||||||| |||    
T  23410738 gaccaaacttatcttgaaaacgtatcaagcaacataaaaattgtgacacgtttttccaaaattgtgtcacgattggacaccctgcaaaacatgctctcga 23410837  T
Q  248 cat 250  Q
    |||    
T  23410838 cat 23410840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 3393394 - 3393290
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||  ||||| || ||||||||||||| |||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  3393394 cacgattgatgtgtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 3393296  T
Q  219 attgga 224  Q
    ||||||    
T  3393295 attgga 3393290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 7764034 - 7763935
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttc-ttttcccttgcatctaactacaccaag 421  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| ||||||| |||||||||||||| ||||||||||||    
T  7764034 caacattt-tccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttctttttcccttgcatccaactacaccaag 7763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 9634892 - 9634985
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| |||||||||||| |||||| | |||||||||||||    
T  9634892 ttctccaccttgacttcaaactgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcacttgcacccaactacaccaagt 9634985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 21711604 - 21711740
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 208  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||| | |||||| |  |||| |    ||||| |||||| | || |||||||    
T  21711604 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaaa 21711703  T
Q  209 tcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||| ||||||||   |||||||||| |||||||||    
T  21711704 tcgtgacacgattgagcaccctgaaaaccatgctcac 21711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 30709546 - 30709427
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||||||| ||| ||||||||||    
T  30709546 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaa 30709448  T
Q  143 ggtacgaccaaccttatcctg 163  Q
    |||| |||||| |||||||||    
T  30709447 ggtaagaccaatcttatcctg 30709427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 420
Target Start/End: Complemental strand, 37408040 - 37407941
Alignment:
Q  324 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctc--cttttc-ttttcccttgcatctaactacaccaa 420  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||| || | ||| || ||||  |||||| |||||||||||||| |||||||||||    
T  37408040 caacatttctccaccttgacttcaaattgatgatgatgccactttaaccatcagccatcaatctcctcttttctttttcccttgcatccaactacaccaa 37407941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 39032285 - 39032126
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| || ||||||| ||||||||  ||||||| |||  |||||| ||| |||||||| ||| |||||||||||||||||||||| |||||||    
T  39032285 acacttatatagcaatcttcagctgtcaaaatcgtgtcacgattt-tcaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcct 39032187  T
Q  163 gtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    | |||||| || |||| |    ||||||||||||   || |||||||||||| ||||||||    
T  39032186 gaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattg 39032126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 424
Target Start/End: Original strand, 2075572 - 2075667
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttc-ttttcccttgcatctaactacaccaagtag 424  Q
    ||||||| |||||||||||| ||||| |||||| ||||||   || || |||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  2075572 ttctccatcttgactctaaattgatggtgatgctactttaggcatcaatcaccattccccttttcattttcccttgcttctaactacaccaagtag 2075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 63 - 245
Target Start/End: Original strand, 16264705 - 16264887
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| ||| |||||||| ||| ||| ||||||||||||||||||||||||||    
T  16264705 acacttatatagcagtcttcagctgtcaaaatcgtgtcacgctttc-caaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcct 16264803  T
Q  163 gtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    | |||||| || ||| |     |||||||||||| | || |||||||||||| ||||||||   |||||| ||| |||||||||    
T  16264804 gaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcac 16264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 25929145 - 25929026
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    ||||||||||| |||||| ||||||| |||  | ||||||| ||||||||  ||||||| ||||| ||||| || ||||| ||| | | ||||| ||||     
T  25929145 cttcaaaatctacaaagaaacacttatatagaaatcttcagctgtcaaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaat 25929046  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||    
T  25929045 gtacgaccaaccttatcctg 25929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 40735005 - 40734911
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattc-tccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || || ||||| || || ||||||||||| ||||||| |||||||||||||||    
T  40735005 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaatcaccaatcctctttttcttttcc-ttgcatccaactacaccaagtag 40734911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 36018408 - 36018330
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||||||||||||||||||  ||||||||| |||| ||| ||||| |||||| | || |||||||||||||||||||||    
T  36018408 gtacgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 36018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 5258717 - 5258810
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 422  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||| ||  ||||| |||||||    
T  5258717 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgaattcaactataccaagt 5258810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 6718292 - 6718192
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctc-cttttcttttcccttgcatctaactacaccaag 421  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| |||| |  ||||||||||||||||| ||||  ||||||    
T  6718292 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctcaccattcttttcccttgcatccaactctaccaag 6718193  T
Q  422 t 422  Q
    |    
T  6718192 t 6718192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 384
Target Start/End: Complemental strand, 4386520 - 4386445
Alignment:
Q  309 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccat 384  Q
    |||||||||| | | |||||||||||||||||||||||||| || |||||||| || |||||| || |||||||||    
T  4386520 ttttgagtcagtatacaacatttctccaccttgactctaaattggtgatgatgtcaatttaaccatcaaccaccat 4386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 40845021 - 40845108
Alignment:
Q  75 cagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    |||||||||| | || ||| ||||||||  |||  ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  40845021 cagtcttcagctatctaaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcct 40845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 48438571 - 48438678
Alignment:
Q  63 acacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||||| ||| |||||||| | ||| ||||  |||||||  |||  ||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||    
T  48438571 acacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcct 48438670  T
Q  163 gtaaacgt 170  Q
    | ||||||    
T  48438671 gaaaacgt 48438678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 27038448 - 27038502
Alignment:
Q  114 ttgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  27038448 ttgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 27038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 37408257 - 37408199
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  37408257 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 40735259 - 40735174
Alignment:
Q  78 tcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    ||||||| ||||||||  |||||||  |||  |||||  | ||||||||| ||| |||||||||||||||||||||||||||||||    
T  40735259 tcttcagctgtcaaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 40735174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 33386359 - 33386247
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 208  Q
    ||||| ||| |||||||||| | ||||||||||| ||||||||||||||||||| |||| |  | |||| |    |||||||||||| |||| | |||||    
T  33386359 caaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaa 33386260  T
Q  209 tcgtgtcacgatt 221  Q
    |||||||||||||    
T  33386259 tcgtgtcacgatt 33386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 40912917 - 40912805
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||| ||||| |||||||| |||||||| | |||| |||| | || ||| |||||||||||| | || ||||||||    
T  40912917 caaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacgttttcccaaaat 40912818  T
Q  210 cgtgtcacgattg 222  Q
     || |||||||||    
T  40912817 tgtatcacgattg 40912805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 53921855 - 53921946
Alignment:
Q  111 aaattgtgacacgattgatgc--atacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 200  Q
    |||| ||| ||||||||||||  ||||||| |||||||||||||||||||||||| |||| || ||| |||   ||||||||||||| ||||    
T  53921855 aaatcgtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcctgaaaacttgtcaaacatattaaaaatcgtgtcacgatt 53921946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 27027118 - 27027161
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  27027118 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 27027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 5260707 - 5260785
Alignment:
Q  124 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  5260707 attgatgcgtacgatccaaagtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 5260785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 37726077 - 37726135
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  37726077 caaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 10058031 - 10057945
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10058031 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10057945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 10060253 - 10060167
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10060253 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10060167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 10062475 - 10062389
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10062475 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 10064697 - 10064611
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10064697 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10064611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 10066919 - 10066833
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 413  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10066919 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26386731 - 26386776
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  26386731 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 26386776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 27986159 - 27986102
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||| ||| |||||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  27986159 aaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 27986102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39153611 - 39153656
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  39153611 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 39153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 23198526 - 23198626
Alignment:
Q  324 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaag 421  Q
    |||||||||||||||||||| |||||  || || ||||| || |||||| || |||||||| ||| ||||| ||||||||||||||  ||||| ||||||    
T  23198526 caacatttctccaccttgacttctaatttgttggtgatgtcaatttaaccatcaaccaccaatctccctttgcttttcccttgcattcaactataccaag 23198625  T
Q  422 t 422  Q
    |    
T  23198626 t 23198626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51398732 - 51398684
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaa 49  Q
    |||||| ||||||||| ||||||||||||||||||||  ||||||||||    
T  51398732 tcaaccctaaagttacctcctttgatttcccaagtttctatctcttcaa 51398684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 4599103 - 4599162
Alignment:
Q  324 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  4599103 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 4599162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 10210982 - 10210923
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  10210982 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 10210923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 16498838 - 16498752
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  16498838 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 16498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 27453359 - 27453417
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | |||| | |||||||||||||||||||||||| ||||    
T  27453359 caaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaac 27453417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 43402588 - 43402661
Alignment:
Q  317 cactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 391  Q
    |||||| ||||||| |||||||||| ||  ||| ||| ||||||||||||||||| || |||||||| |||||||    
T  43402588 cactttacaacatt-ctccaccttgccttcaaattgaagatgatgccactttaaccatcaaccaccaatctcctt 43402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 51398590 - 51398488
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 242  Q
    |||||||||||| ||||||  |||| |||| | ||  || ||||| |||||| | || |||||||||||||||| |||||| |||||| |||| ||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaaaccatgct 51398491  T
Q  243 cac 245  Q
    |||    
T  51398490 cac 51398488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22835252 - 22835297
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  22835252 tcaaccctaaagttacctcctttgattttccaagttttcctctctt 22835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 24694775 - 24694730
Alignment:
Q  205 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    |||||||||  ||||||||| |||||| ||||||||||||||||||    
T  24694775 aaaatcgtgatacgattggacaccctgcaaaacatgctcacgacat 24694730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 27974701 - 27974586
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||  ||||  ||| |||||||   |||||  || |||||||||| | ||||||||||    
T  27974701 cttcaaaatctgcacaaga-acacttatataacagtcttcagctgataaaatcgtgccacaatttc-caaatcatgtcacgattgatacgtacgacccaa 27974604  T
Q  143 ggtacgaccaaccttatc 160  Q
    ||||| ||||||||||||    
T  27974603 ggtacaaccaaccttatc 27974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29196651 - 29196688
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  29196651 tcaaccctaaagttacctcctttgatttcccaagtttt 29196688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32744676 - 32744713
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  32744676 tcaaccctaaagttacctcctttgatttcccaagtttt 32744713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7762184 - 7762148
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  7762184 tcaaccctaaagttacctcctttgatttcccaagttt 7762148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 16498939 - 16498903
Alignment:
Q  10 aagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  16498939 aagttacctcctttgatttcccaagttgtcatctctt 16498903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 29812981 - 29812945
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  29812981 tcaaccctaaagttacctcctttgatttcccaagttt 29812945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40735301 - 40735265
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  40735301 tcaaccctaaagttacctcctttgatttcccaagttt 40735265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44331473 - 44331437
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  44331473 tcaaccctaaagttacctcctttgatttcccaagttt 44331437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53921753 - 53921801
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaa 49  Q
    |||||| ||||||||| || ||||||||||||||||||  |||||||||    
T  53921753 tcaaccctaaagttacctcatttgatttcccaagtttttctctcttcaa 53921801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 44 - 245
Target Start/End: Original strand, 42426540 - 42426741
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||||| ||||||||  ||   ||||| |||||| | ||| ||| |||||||||||    
T  42426540 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaag 42426638  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 242  Q
    |||||||||||||||||||| |||| |||| ||||  || ||||| |||||| | || ||||||||||||||||||||||| |||||| |||| ||||||    
T  42426639 gtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 42426738  T
Q  243 cac 245  Q
    |||    
T  42426739 cac 42426741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 13488066 - 13487869
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||| | ||||||| ||| |||||||||| |||||||| ||||||||  ||   ||||| |||||||| ||| ||| |||||||||||    
T  13488066 cttcaaaatctgcaaaaa-acacttatataacagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaag 13487968  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||| |||| |||| |||| ||| |||||||||   || || |||||||||||||||||||||   ||||||||||| ||||||    
T  13487967 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtg--ctgttttcccaaaatcgtgtcacgattgagcaccctgaaaaatatgctc 13487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 19806269 - 19806113
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||| | |||||||| ||| ||| |||||||||||    
T  19806269 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaag 19806171  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||||||||||  ||||||||| |||| ||| |||||||||||| |||||    
T  19806170 gtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaatcgtgtcacgattg 19806113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 44 - 245
Target Start/End: Complemental strand, 32636687 - 32636486
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||| ||||| ||||||||   ||||||  ||   ||||| |||||||| ||| ||| || ||||||||    
T  32636687 cttcaaaatctgcaaaga-acacttatatagcagttttcagctgtcaaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaag 32636589  T
Q  144 gtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgct 242  Q
    ||||||||||||||||||||  |||| |||| |||| | | ||||||||| || | || ||||||||||||||||||||||| ||| || |||||||| |    
T  32636588 gtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacgttttcccaaaatcgtgtcacgattggacaccttgcaaaacatgtt 32636489  T
Q  243 cac 245  Q
    |||    
T  32636488 cac 32636486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 37438934 - 37438808
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||| | |||| | || |||||||||||||||| | || ||||||||| |||||||    
T  37438934 cacgattgatgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacg 37438835  T
Q  219 attggaaaccctgaaaaacatgctcac 245  Q
    |||||| || ||||||| |||||||||    
T  37438834 attggacactctgaaaaccatgctcac 37438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 5057629 - 5057495
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||| |||  | || | | ||||| |||||| | ||  |||||||    
T  5057629 caaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgttttaccaaaat 5057530  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctca 244  Q
    ||||||||||||||| ||||||||||  |||||||    
T  5057529 cgtgtcacgattggacaccctgaaaactatgctca 5057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 13239615 - 13239425
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtca--aattgtgacacgattgatgcatacgaccca 141  Q
    |||||||||||||||||| ||||||| ||| ||||||||||  ||||||| ||||||||  ||   ||  ||| ||| |||||||||||| |||||||||    
T  13239615 cttcaaaatctgcaaaga-acacttatatagcagtcttcagc-gtcaaaattgtgtcacgttttc-catcaatcgtgtcacgattgatgcgtacgaccca 13239519  T
Q  142 aggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||||||||||| |||| || | |||| | |||| ||||||||| | || ||||||||| ||||||||||| | ||||| ||||    
T  13239518 aggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttgtcacgattgaacaccctaaaaa 13239425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 12083937 - 12083812
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||  |||||||| ||||||||  ||   ||||| |||||||||||| ||||||||||||||    
T  12083937 cttcaaaatctgcacaaga-acacttatatagcagtcttcaactgtcaaaattgtgtcacgttttc-caaatcgtgacacgattggtgcatacgacccaa 12083840  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||||||||||||||| ||||||    
T  12083839 ggtacgaccaaccttatcctgaaaacgt 12083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 16650958 - 16651121
Alignment:
Q  76 agtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaa 175  Q
    |||||| || ||||||||  |||||||| || | ||||| |||||||| ||| ||| ||||| ||||||||||||||||||||||||| |||||| || |    
T  16650958 agtctttagctgtcaaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtaccca 16651057  T
Q  176 gcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacat 239  Q
     || |  | ||||||||||| | || ||||||||||||||| |||||   ||||||||||||||    
T  16651058 acaagttataaatcgtgtcacgttttcccaaaatcgtgtcatgattgagtaccctgaaaaacat 16651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 13487796 - 13487702
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| ||||||| || ||||||||||||    
T  13487796 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaatcttcttttcttttcctttgcatccaagtacaccaagtag 13487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 42428822 - 42428924
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 242  Q
    |||||||||||||||||||  |||| |||| |||| |||||||||||||||| | || ||||||||||||||||||||||| |||||| |||| ||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 42428921  T
Q  243 cac 245  Q
    |||    
T  42428922 cac 42428924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16649872 - 16650044
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt------------caaaatctgcaaagagacacttacatatcagtcttcagttgt 88  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||            ||||||||||||||| ||||||| |||  |||||| || |||    
T  16649872 tcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaacctatcattcaaaatctgcaaagaaacacttatatagtagtctttagctgt 16649971  T
Q  89 caaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 161  Q
    |||||   ||||||| || | ||||| |||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  16649972 caaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 165 - 328
Target Start/End: Original strand, 3076045 - 3076210
Alignment:
Q  165 aaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtc 264  Q
    |||||| |||||||||||||||||||||||| | |||||||||||| ||||||  ||| | || |   ||||||||||||| |||||||||||| ||  |    
T  3076045 aaacgtaccaagcatgccaaaaatcgtgtcacggttgcccaaaatcttgtcacatttgtacacacaagaaaacatgctcacaacataggaaaatcgtaac 3076144  T
Q  265 atggtccacaaatcgtgtcatgatttgtaacatgctc--aaatcatttttgagtcactttgcaaca 328  Q
    | | | |||||||||||||| |||||| ||| |  ||  |||||||||||||||||| || |||||    
T  3076145 acgcttcacaaatcgtgtcacgatttgcaactttttccaaaatcatttttgagtcacattacaaca 3076210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 11181592 - 11181433
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttca---gttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccc 140  Q
    |||||||| ||||||||| ||||||| ||| |||||||||   | ||| ||||||||||||| ||||  |||||||||||||| ||||| | ||| ||||    
T  11181592 cttcaaaaactgcaaaga-acacttatataacagtcttcatcagctgtaaaaaatgtgtcacgattgaccaaattgtgacacggttgatacgtacaaccc 11181494  T
Q  141 aaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    | |||| ||||||||||||| |||| ||||||||| ||   | |||||||||||| |||||    
T  11181493 acggtatgaccaaccttatcttgtatacgtgccaaacaaatcgaaaatcgtgtcacgattg 11181433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 535700 - 535616
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 195  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| |||| || | |||| ||| ||||||||||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 535616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 39468909 - 39468993
Alignment:
Q  117 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||  ||||||| | |||| ||| |||||||||||| |||||    
T  39468909 tgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcacgattg 39468993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 25412550 - 25412468
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  25412550 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 25412468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 29722156 - 29722055
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattct--ccttttcttttcccttgcatctaactacaccaa 420  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| |||  |||||| |||||||||||||| ||||| |||||    
T  29722156 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctccccttttgttttcccttgcatccaactataccaa 29722057  T
Q  421 gt 422  Q
    ||    
T  29722056 gt 29722055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 14520632 - 14520692
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  14520632 caaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 14520692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 40146824 - 40146712
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctga 232  Q
    |||||||||||||||||||||| || ||||| ||||||| | | || ||  ||||||| ||||   || ||||||||||||||||||||||| |||||||    
T  40146824 tacgacccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacgattggacaccctga 40146725  T
Q  233 aaaacatgctcac 245  Q
    ||| |||| ||||    
T  40146724 aaaccatgttcac 40146712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 424
Target Start/End: Original strand, 42426825 - 42426921
Alignment:
Q  328 atttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    ||||||||||||||| |  ||| ||||||||||||||||||||  || |||||||| |  | ||||||||||||||||||| | |||||||||||||    
T  42426825 atttctccaccttgaattcaaattgatgatgatgccactttaagtatcaaccaccaattcctttttcttttcccttgcatccatctacaccaagtag 42426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 27015112 - 27015021
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| | || ||  |||||||||||| |||||    
T  27015112 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccaacaagctgaaaatcgtgtcacgattg 27015021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 30683312 - 30683403
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||||||||| |||| |||| |||| | | |||||||||||| | || |||||||| |||||||||||||| || |||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacactctgaaaa 30683403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 36932045 - 36931986
Alignment:
Q  109 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  36932045 tcaaattgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 13342849 - 13342767
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||| ||||| | ||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  13342849 cacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 13342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 30182376 - 30182302
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgt 193  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| ||||||||||||||    
T  30182376 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgt 30182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 11916732 - 11916608
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||  ||||||||  |||||||  ||  |||||| |||| ||||||| ||| ||||||||||    
T  11916732 cttcaaaatctgcacaaga-acacttatatagcagttttcaactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaa 11916634  T
Q  143 ggtacgaccaaccttatcctgtaaac 168  Q
    |||||||||||||| |||||| ||||    
T  11916633 ggtacgaccaacctgatcctgaaaac 11916608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 38746585 - 38746535
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 160  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  38746585 caaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 16409081 - 16408981
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 421  Q
    ||||||||||||||||||||| ||||  || || ||||| ||||||||| || |||||||| || || ||||||||||||||||||  ||||| ||||||    
T  16409081 caacatttctccaccttgacttctaatttggtggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactataccaag 16408982  T
Q  422 t 422  Q
    |    
T  16408981 t 16408981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 535513 - 535459
Alignment:
Q  317 cactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    |||||| |||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  535513 cactttacaacatttctccaccttgccttcaaattgatgatgatgccactttaac 535459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 9353029 - 9352971
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  9353029 caaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 213068 - 213007
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    |||||||||||| | || |||||||||||||||||||||||  ||||| ||| |||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaaccatgctcac 213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5887666 - 5887711
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  5887666 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 5887711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16451999 - 16451954
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  16451999 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 16451954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31182891 - 31182846
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  31182891 tcaaccctaaagttacctcctttgatttcccaagttttcctctctt 31182846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 31004848 - 31004796
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 162  Q
    ||||| |||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  31004848 caaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcct 31004796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 36074427 - 36074467
Alignment:
Q  123 gattgatgcatacgacccaaggtacgaccaaccttatcctg 163  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  36074427 gattgatgcgtacgatccaaggtacgaccaaccttatcctg 36074467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 16546220 - 16546161
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  16546220 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 16546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 40381893 - 40381834
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  40381893 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 40381834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 11181450 - 11181412
Alignment:
Q  205 aaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  11181450 aaaatcgtgtcacgattggacaccctgcaaaacatgctc 11181412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 38746534 - 38746456
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    |||||||||||||||||||| |||| || | |||| ||| |||||||||||| | ||  ||||||  ||||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgattg 38746456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 533545 - 533488
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||||||||||| |||| |||| |||| ||| |||| ||||||| |||||    
T  533545 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaaccgtgtcacgattg 533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 535746 - 535698
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaa 93  Q
    |||||||||||||||||| ||| ||| |||||||||||||| ||||||||    
T  535746 cttcaaaatctgcaaaga-acaattatatatcagtcttcagctgtcaaaa 535698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 42428735 - 42428783
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaa 93  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  42428735 cttcaaaatctgcaaaga-acatttatatagcagtcttcagttgtcaaaa 42428783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13488121 - 13488085
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  13488121 tcaaccctaaagttacctcctttgatttcccaagttt 13488085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28750905 - 28750941
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28750905 tcaaccctaaagttacctcctttgatttcccaagttt 28750941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39468799 - 39468835
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  39468799 tcaaccctaaagttacctcctttgatttcccaagttt 39468835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 111 - 290
Target Start/End: Complemental strand, 3909893 - 3909715
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||||| |  ||||||||||| |||||||||||| |||||||| || || ||||||    
T  3909893 aaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttatctta-aaacgtgccaaacatgccaaaaatagtgtcatgttttccaaaaatc 3909795  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgattt 290  Q
    ||||||||||| || ||| || |||||||||||||||||| | ||||| ||| |||| | || ||||||||||| |||||    
T  3909794 gtgtcacgatttgacaccgtgcaaaacatgctcacgacattgcaaaatcgtgacatgcttcaaaaatcgtgtcacgattt 3909715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 36314990 - 36314812
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  36314990 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 36314892  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || |||||||||||| ||||||||    
T  36314891 ggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 36329199 - 36329021
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  36329199 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 36329101  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || |||||||||||| ||||||||    
T  36329100 ggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36329021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 25861793 - 25861601
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| |||  ||||||||  ||||||||  |||||||  |||  ||||| |||||||||||||||| |||||||||||    
T  25861793 cttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaag 25861694  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatg-attgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||||||||| |||| |||| |||| |   |||||||||||| |  || |||||||||||| ||||||||   ||||||||||    
T  25861693 gtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaatcgtgtcacgtttttcccaaaatcgtgacacgattgagcaccctgaaaa 25861601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 52095740 - 52095856
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| | || |||||||||||||||||    
T  52095740 cacgattgatgcttacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 52095839  T
Q  219 attggaaaccctgaaaa 235  Q
    |||||| ||||||||||    
T  52095840 attggacaccctgaaaa 52095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 6655536 - 6655400
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||  || ||||||||||||   || ||||||||    
T  6655536 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaat 6655437  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacg 246  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  6655436 cgtgtcacgattggacaccctgcaaaacatgctcacg 6655400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 26363845 - 26363720
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    |||||||||||||| ||| ||| |||||||||||||| |||||||||||||||| |||| |||  |||| ||| |||||||||||| | || ||||||||    
T  26363845 caaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaat 26363746  T
Q  210 cgtgtcacgattggaaaccctgaaaa 235  Q
    ||||||||||||||| ||||| ||||    
T  26363745 cgtgtcacgattggacaccctaaaaa 26363720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 220
Target Start/End: Original strand, 34570719 - 34570894
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| |||| || |||  ||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||||||    
T  34570719 cttcaaaatctgcaaaga-acacatatatagtagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaag 34570817  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgat 220  Q
    |||| ||||||||||||||| |||| || | |||| ||| |||||||||||| | || |||||||||||||||||||    
T  34570818 gtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgat 34570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 44 - 223
Target Start/End: Complemental strand, 37740489 - 37740311
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||  ||| ||  |||||||||||    
T  37740489 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaag 37740391  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 223  Q
    |||||||||||||||||||| |||| ||||  ||| ||| |||||| ||||| | || ||||||||||||| ||||||||    
T  37740390 gtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtgttacgattgg 37740311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 54882411 - 54882320
Alignment:
Q  335 caccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtagtt 426  Q
    |||||||||||||||||||||||||||| | |||||| || ||||||||||||||||| | ||||||||||||| |||||||||||||||||    
T  54882411 caccttgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctttacctttcccttgcatccaactacaccaagtagtt 54882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 54882619 - 54882485
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||||||| |||  ||| ||| ||||||||||||||||| ||||||||||||| ||||||| | | || ||| |||||||||||| | || |||||||||    
T  54882619 aaattgtgtcacagttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatc 54882520  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    |||||||||||||| |||||| ||| |||||||||    
T  54882519 gtgtcacgattggacaccctgcaaaccatgctcac 54882485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 24968898 - 24968801
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcac 217  Q
    ||||||||| || |||||||||| |||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| |||||| ||||||||||||||    
T  24968898 cacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 5268960 - 5268766
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||| ||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  5268960 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 5268862  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 237  Q
    ||||||||||||||||||||| |||||| || | || |    |||||||||||| | || |||||||||||| ||||||||   ||||||||||||    
T  5268861 ggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaac 5268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 9927831 - 9927966
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| |||||||||||| |||||||||||||||||| |||| || | |||| ||| ||||||||||||   || ||||||||    
T  9927831 caaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaat 9927930  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||||||| | |||||| |||||||| ||||    
T  9927931 cgtgtcacgattgaacaccctgcaaaacatgttcac 9927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 12745787 - 12745908
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||||||| | |||| |||| |||| ||| |||||||||||| | || ||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaat 12745886  T
Q  210 cgtgtcacgattggaaaccctg 231  Q
    | ||||||||||||| ||||||    
T  12745887 catgtcacgattggacaccctg 12745908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 29055983 - 29055866
Alignment:
Q  307 atttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgca 406  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | | | ||||| ||| |||| ||    
T  29055983 atttttgagtcaaattacaacatttctccaccttgactctaaaatgatggtgatgccaatttaacaattaaccaccttaccctttttcattttccttcca 29055884  T
Q  407 tctaactacaccaagtag 424  Q
    || |||||||||| ||||    
T  29055883 tccaactacaccatgtag 29055866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 27417539 - 27417651
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||| | || |   |||||||||||| | || ||||||||    
T  27417539 caaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgttttcccaaaat 27417638  T
Q  210 cgtgtcacgattg 222  Q
    |||||||||||||    
T  27417639 cgtgtcacgattg 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 238
Target Start/End: Complemental strand, 6743175 - 6742981
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||  |||||||| |||||||   ||   ||||| |||||||||||  ||| |||| |||||    
T  6743175 cttcaaaatctgcacaaga-acacttatatagcagtcttcaactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaa 6743077  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    ||||||||||||||||||||| ||||||||| | || |   |||||||||||| | || ||||||| |||| ||||||| |  |||||||||||||    
T  6743076 ggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctgaaaaaca 6742981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 221
Target Start/End: Complemental strand, 8689256 - 8689079
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| ||| |||||||| ||| ||||||||||    
T  8689256 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcgtggcacgattggtgcgtacgacccaa 8689159  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    ||||||||||||||||||||| |||||| || |||| |    |||||||||||| | || ||||||||||||||||||||    
T  8689158 ggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgatt 8689079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 40630564 - 40630450
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||||||| ||| ||| ||||| |||| ||  |||||||||||| | || ||||||||    
T  40630564 caaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgttttcccaaaat 40630465  T
Q  210 cgtgtcacgattgga 224  Q
    |||| ||||||||||    
T  40630464 cgtgacacgattgga 40630450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 116 - 289
Target Start/End: Complemental strand, 5429472 - 5429299
Alignment:
Q  116 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 215  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| |||| |||| || | | || ||  |||||||| ||| | || ||||||||||||||    
T  5429472 gtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtgtc 5429373  T
Q  216 acgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
    |||||| || |||||| ||||||||||| | |||| | ||||| ||| || | |   |||||||||||||||||    
T  5429372 acgattagacaccctgcaaaacatgctctcaacattgcaaaatcgtgacacgcttaccaaatcgtgtcatgatt 5429299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 111 - 284
Target Start/End: Original strand, 46570115 - 46570287
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||||||| |||||||||| |||||||||||||||||||| |||  |||| |||| ||| ||||| |||||| | || |||||||||    
T  46570115 aaatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatc 46570214  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtca 284  Q
     ||||||||||||  |||||| | |||| |||| ||||||   ||||| ||| || | | ||||||||||||||    
T  46570215 ttgtcacgattgggcaccctgcagaaca-gctctcgacatttcaaaatcgtgacacgcttcacaaatcgtgtca 46570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 5370479 - 5370575
Alignment:
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacat 239  Q
    |||||||||||||||||||| ||  | |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaacat 5370575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 41639145 - 41639033
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||| | || |   |||||||||||| | ||  |||||||    
T  41639145 caaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaat 41639046  T
Q  210 cgtgtcacgattg 222  Q
    |||||||||||||    
T  41639045 cgtgtcacgattg 41639033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 54867519 - 54867694
Alignment:
Q  47 caaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggt 145  Q
    ||||||||||| |||| ||||||| |||  ||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||||| |||||||    
T  54867519 caaaatctgcacaaga-acacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggt 54867617  T
Q  146 acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||||||||||   ||||||||| |||| |   |||||||||||| | || |||||||| ||| ||||||||    
T  54867618 acgaccaaccttatccgaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgtgacacgattg 54867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 424
Target Start/End: Original strand, 34570996 - 34571091
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagtag 424  Q
    ||||||||||| |||  ||| ||||||||||||||||||||| || |||||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  34570996 ttctccaccttaacttcaaattgatgatgatgccactttaaccatcaaccaccaatttcctttttcttttcccttgcatccaactacaccaagtag 34571091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 50674434 - 50674548
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| ||||||||| |||| ||  |||||| ||||| | || ||||||||    
T  50674434 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaat 50674533  T
Q  210 cgtgtcacgattgga 224  Q
    |||  ||||||||||    
T  50674534 cgtaacacgattgga 50674548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 201
Target Start/End: Original strand, 54200210 - 54200367
Alignment:
Q  43 tcttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    ||||||||| || |||||| ||||||| ||| |||||||||| | ||||||  |||||||| ||   ||||| |||||  | ||| ||| ||||||||||    
T  54200210 tcttcaaaaactacaaaga-acacttatatagcagtcttcagctatcaaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaa 54200308  T
Q  143 ggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||||||||| || |||| |||| |||| ||| |||||||||||| |||||    
T  54200309 ggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgattg 54200367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 18377798 - 18377874
Alignment:
Q  166 aacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgct 242  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||||| |||| | |||| ||||||||||||    
T  18377798 aacgtgtcaagcatgccaaaaatcgtgtcatgattgctcgaaatcgtgtcacaattgaacacccagaaaaacatgct 18377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 38152197 - 38152081
Alignment:
Q  45 ttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 144  Q
    ||||||||||||| ||  ||||||| ||| |||| ||||| ||||||||  |||||||| ||  ||||| ||| | ||||||||||| ||||| ||||||    
T  38152197 ttcaaaatctgcacaggaacacttatatagcagtattcagctgtcaaaatcgtgtcacattttttcaaaatgtaaaacgattgatgcgtacgatccaagg 38152098  T
Q  145 tacgaccaaccttatcc 161  Q
    |||||||||||||||||    
T  38152097 tacgaccaaccttatcc 38152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 289
Target Start/End: Complemental strand, 2209266 - 2209122
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||| |||| |||| ||||  || |||||||||||| | || ||||||||||||||||||||||  || ||| |||||| ||||    
T  2209266 gtacgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaaaca-gctc 2209168  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
     |||||| | ||||| ||| || | | || ||||||||||| ||||    
T  2209167 tcgacattgcaaaatcgtgacacgcttcaaaaatcgtgtcacgatt 2209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 35662070 - 35661905
Alignment:
Q  46 tcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggt 145  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||| ||| ||||  || | ||||| |||||||| ||| |||            ||    
T  35662070 tcaaaatctgcaaaga-acacttatatagcagtcttcagttgtcaaaattgtatcacgttttgccaaatcgtgacacggttggtgc------------gt 35661984  T
Q  146 acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 224  Q
    |||||||||||||||||| ||||||||| | || ||| ||||||||| ||   || |||||||||||||||||||||||    
T  35661983 acgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacgattgga 35661905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 5148080 - 5148140
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  5148080 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 5148140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 36994358 - 36994219
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||| ||||||||| ||||||||||  | ||||||||| |||| ||| ||||| ||| || | || || |||||    
T  36994358 caaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttccaaaaat 36994259  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
     |||||||||||||| || | | ||||||||||||||||||    
T  36994258 tgtgtcacgattggacactcag-aaaacatgctcacgacat 36994219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 52083027 - 52083119
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  52083027 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 52083119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 52094034 - 52094126
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  52094034 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 52094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 56179028 - 56179120
Alignment:
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 235  Q
    |||||||||||||||||||| ||| | |||| |||| |||||||||| ||||| | || |||||||||||||||||||||||  |||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacgattggacgccctgaaaa 56179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 16623053 - 16622935
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||| | | ||||||| ||| ||| |||||  ||||||||  |||||||  ||   ||||| |||||||||||| ||| |||||||||||    
T  16623053 cttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacgacccaag 16622955  T
Q  144 gtacgaccaaccttatcctg 163  Q
    ||||||||||||||||||||    
T  16622954 gtacgaccaaccttatcctg 16622935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 289
Target Start/End: Original strand, 26176028 - 26176172
Alignment:
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||||||| |||| |||| | || ||| |||||||||||| | || |||||||| |||||||| ||||  |||||| |||||| ||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaaaaca-gctc 26176126  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 289  Q
     |||||| | ||||| ||| || | | ||||||| |||||| ||||    
T  26176127 tcgacattgcaaaatcgtgacacgcttcacaaattgtgtcacgatt 26176172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 201
Target Start/End: Complemental strand, 29254357 - 29254201
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||| ||||     
T  29254357 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaa 29254259  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
     ||||||||||||||| ||| | || |||| | || ||| |||||| ||||| |||||    
T  29254258 atacgaccaaccttattctgaatacttgcccaacaagccgaaaatcatgtcacgattg 29254201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 424
Target Start/End: Original strand, 12740129 - 12740222
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| |||| |||||||||||||| | || |||||  | || ||||||||||| ||||||||| |||||||||||||||    
T  12740129 ttctccaccttgacttcaaattgataatgatgccactttagccatcaaccagtaatccccttttctttt-ccttgcatccaactacaccaagtag 12740222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 424
Target Start/End: Original strand, 12748335 - 12748428
Alignment:
Q  330 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    |||||||||||||||  ||| |||| |||||||||||||| | || |||||  | || ||||||||||| ||||||||| |||||||||||||||    
T  12748335 ttctccaccttgacttcaaattgataatgatgccactttagccatcaaccagtaatccccttttctttt-ccttgcatccaactacaccaagtag 12748428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 16628567 - 16628517
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 160  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  16628567 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatc 16628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 39774031 - 39773981
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 161  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  39774031 aaattgtgtcacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 3777961 - 3778085
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    |||||||| ||| |||||||||||||||||||||||||||| || |||||| || ||| |     |||||||||||| | || |||||||||||| ||||    
T  3777961 cacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacg 3778060  T
Q  219 attggaaaccctgaaaaacatgctc 243  Q
    ||||   |||||| ||| |||||||    
T  3778061 attgagcaccctgcaaaccatgctc 3778085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 12739942 - 12740037
Alignment:
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    |||||||||||||||||||| ||| | |||| |||| ||||||||| |||| | | || |||||||||||||| || ||||| |||||| ||||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca 12740037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 12748148 - 12748243
Alignment:
Q  144 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 238  Q
    |||||||||||||||||||| ||| | |||| |||| ||||||||| |||| | | || |||||||||||||| || ||||| |||||| ||||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca 12748243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 5396384 - 5396327
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||| ||| |||||||| ||| ||||||||||||||||| ||||||||||||| ||||    
T  5396384 aaatcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 36771031 - 36770966
Alignment:
Q  306 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 371  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||  ||||||||| | ||||||    
T  36771031 catttttgagtcactttttaacaattcttcaccttgactctaaaatagtgatgatgcaaatttaac 36770966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 5137879 - 5137819
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacca 383  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || ||||||||    
T  5137879 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacca 5137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 5143663 - 5143723
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||| |||||||||||| |||  || ||||||||| ||||||||||||||||| ||||||    
T  5143663 caaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgt 5143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 5871736 - 5871693
Alignment:
Q  3 aaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||| ||||||||| |||||||||||||||||||||| ||||||    
T  5871736 aaccctaaagttacctcctttgatttcccaagttttcctctctt 5871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 7124493 - 7124434
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  7124493 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 7124434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 8395195 - 8395136
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 382  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  8395195 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 8395136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 13992732 - 13992797
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    |||||||||||| |||| |||||||||||||||||||| |  |||||| ||| || |||||||||||    
T  13992732 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacca-gctcacgacat 13992797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 26175941 - 26175998
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcac 102  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||||  |||||||    
T  26175941 cttcaaaatctgcaaaga-acacttatatagcagtcttcagctgtcaaaatcgtgtcac 26175998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 30000873 - 30000935
Alignment:
Q  140 caaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    |||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 30000935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 55085955 - 55086032
Alignment:
Q  144 gtacgaccaacctt-atcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 221  Q
    |||||||||||||| |||||| || ||||||||||||||| ||||||||| || | || ||| ||||||||||| ||||    
T  55085955 gtacgaccaacctttatcctgaaagcgtgccaagcatgcccaaaatcgtgccacgttttccc-aaatcgtgtcatgatt 55086032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24969029 - 24968984
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctctt 46  Q
    |||||| ||||||||| |||||||||||||||||||||  ||||||    
T  24969029 tcaaccttaaagttacctcctttgatttcccaagtttttctctctt 24968984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46147605 - 46147642
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagtttt 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  46147605 tcaaccctaaagttacctcctttgatttcccaagtttt 46147642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5429597 - 5429549
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaa 49  Q
    |||||| ||||||||| ||||||||||||||||||||   |||||||||    
T  5429597 tcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaa 5429549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9927707 - 9927743
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  9927707 tcaaccctaaagttacctcctttgatttcccaagttt 9927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48142960 - 48142924
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  48142960 tcaaccctaaagttacctcctttgatttcccaagttt 48142924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52082907 - 52082943
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  52082907 tcaaccctaaagttacctcctttgatttcccaagttt 52082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52093914 - 52093950
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  52093914 tcaaccctaaagttacctcctttgatttcccaagttt 52093950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 52095612 - 52095648
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  52095612 tcaaccctaaagttacctcctttgatttcccaagttt 52095648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 56178886 - 56178922
Alignment:
Q  1 tcaaccataaagttacgtcctttgatttcccaagttt 37  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  56178886 tcaaccctaaagttacctcctttgatttcccaagttt 56178922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 44 - 284
Target Start/End: Original strand, 20720 - 20959
Alignment:
Q  44 cttcaaaatctgcaaagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 143  Q
    |||||||||||||||||| ||||||| ||| |||| ||||| | ||||||  |||| ||  || | ||||| |||||||| ||  ||| |||||||||||    
T  20720 cttcaaaatctgcaaaga-acacttatataacagttttcagctatcaaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaag 20818  T
Q  144 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 243  Q
    |||||||||||||||| ||  |||| | || | || ||| |||||||||||| | || ||||||||||||||| ||||||| |||||| |||||||||||    
T  20819 gtacgaccaaccttattctaaaaactttcccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaaaacatgctc 20918  T
Q  244 acgacataggaaaattgtgtcatggtccacaaatcgtgtca 284  Q
    ||||||| | ||||| ||| || | | ||||||||||||||    
T  20919 acgacattgcaaaatcgtgacacgcttcacaaatcgtgtca 20959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 80871 - 81006
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| ||||||||| || | || ||||||||    
T  80871 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgttttcccaaaat 80970  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    ||||||||||||||| ||||||||||  ||||||||    
T  80971 cgtgtcacgattggataccctgaaaacaatgctcac 81006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 11138 - 11002
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 209  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||  || ||||||||||||   || ||||||||    
T  11138 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaat 11039  T
Q  210 cgtgtcacgattggaaaccctgaaaaacatgctcacg 246  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  11038 cgtgtcacgattggacaccctgcaaaacatgctcacg 11002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 111 - 257
Target Start/End: Original strand, 17635 - 17781
Alignment:
Q  111 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 210  Q
    |||| |||||||| ||| ||| |||||| || |||||||||||||||||| || || | |||| |||| |||||||||||||||| | || |||||||||    
T  17635 aaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  211 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaa 257  Q
    |||||||| ||||| |||||| ||||||||||| |||||| ||||||    
T  17735 gtgtcacggttggacaccctgcaaaacatgctctcgacattggaaaa 17781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 6022 - 6148
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||| ||| ||| |||||||||| ||||||||  |||||||  |||  |||||||||||||||||| ||| ||||||||||    
T  6022 cttcaaaatctgcacaaga-acatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaa 6120  T
Q  143 ggtacgaccaaccttatcctgtaaacgt 170  Q
    ||||||||||||||||||||| ||||||    
T  6121 ggtacgaccaaccttatcctgaaaacgt 6148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 2830 - 2954
Alignment:
Q  44 cttcaaaatctgca-aagagacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 142  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| ||| ||||  |||||||  |||  ||||| |||||||||||| ||| ||||||||||    
T  2830 cttcaaaatctgcacaaga-acacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 2928  T
Q  143 ggtacgaccaaccttatcctgtaaac 168  Q
    ||||||||||||||||||||| ||||    
T  2929 ggtacgaccaaccttatcctgaaaac 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 132974 - 132916
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  132974 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 149457 - 149543
Alignment:
Q  133 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 222  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  149457 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 149543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 149356 - 149392
Alignment:
Q  10 aagttacgtcctttgatttcccaagttttcatctctt 46  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  149356 aagttacctcctttgatttcccaagttgtcatctctt 149392  T

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Target: scaffold0002 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 434321 - 434217
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaa-tcgtgtcatgattgcccaaaatcgtgtcac 217  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||| |||||||| |||| ||||||||||||||||    
T  434321 cacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcac 434222  T
Q  218 gattg 222  Q
    |||||    
T  434221 gattg 434217  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 43656 - 43598
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  43656 caaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

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Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 250
Target Start/End: Complemental strand, 36527 - 36387
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 208  Q
    ||||| ||| || ||||| ||| ||||||||||||||||||||||||||||||| |||||| || |||| |    ||||| |||||| | || | |||||    
T  36527 caaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaa 36428  T
Q  209 tcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 250  Q
    ||||| ||||||| || |||||| ||| || |||||||||||    
T  36427 tcgtgccacgatttgacaccctgcaaacca-gctcacgacat 36387  T

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Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 9304 - 9404
Alignment:
Q  324 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 421  Q
    ||||||||||||||||||||| ||||  ||||| ||||| ||||||||| || |||||||| || || ||||||||||||||||||  ||||| ||||||    
T  9304 caacatttctccaccttgacttctaatttgatggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactataccaag 9403  T
Q  422 t 422  Q
    |    
T  9404 t 9404  T

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Target: scaffold0140 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 8113 - 8054
Alignment:
Q  109 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  8113 tcaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 114374 - 114270
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 218  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||| |||   |||| |||| ||| |||||||||||| | || ||||| ||||||||| |    
T  114374 cacgagtgatgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtcatg 114276  T
Q  219 attgga 224  Q
    ||||||    
T  114275 attgga 114270  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 265
Target Start/End: Original strand, 45601 - 45756
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 208  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| |||| |  | |||| |    |||||||||||| |||| | || ||    
T  45601 caaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaa 45700  T
Q  209 tcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtca 265  Q
    ||||| ||||||| || |||||| ||| || |||||||||||   ||||||||||||    
T  45701 tcgtgccacgatttgacaccctgcaaatca-gctcacgacattacaaaattgtgtca 45756  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 6907 - 6816
Alignment:
Q  110 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 201  Q
    ||||| |||||| | ||| ||| ||||||||||||||| ||||||||||||||| |||||| || |||| |   |||||||||||| |||||    
T  6907 caaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgttcctagcaagttgaaaatcgtgtcacgattg 6816  T

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Target: scaffold0466; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 6833 - 6793
Alignment:
Q  205 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 245  Q
    |||||||||||||||||||| |||||| ||| |||||||||    
T  6833 aaaatcgtgtcacgattggacaccctgcaaaccatgctcac 6793  T

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Target: scaffold1908 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 1114 - 1041
Alignment:
Q  351 tgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 424  Q
    ||||||||||||||||||||| || |||||||| || | ||||  ||| ||||||||| | |||||||||||||    
T  1114 tgatgatgatgccactttaaccatcaaccaccaatcccatttttcttttccttgcatccatctacaccaagtag 1041  T

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Target: scaffold0510 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 1295 - 1247
Alignment:
Q  120 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 168  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  1295 cacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 1247  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 25570 - 25531
Alignment:
Q  184 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  25570 aaaatcgtgtcacgattggccaaaatcgtgtcacgattgg 25531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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