View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163_low_9 (Length: 352)
Name: NF10163_low_9
Description: NF10163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 7951808 - 7951473
Alignment:
| Q |
1 |
aaatcattaatccttttcattaatcttcaaaaggttcggccttttcctctctccaatcatccactcacaaatttacaaactccaatnnnnnnnnnnnnnn |
100 |
Q |
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| T |
7951808 |
aaataattaatccttttcattaatcttcaaaaggttcggccttttccgctctccaatcatccactcacaaatttacaaactccaataaaaaatgtaaaga |
7951709 |
T |
|
| Q |
101 |
nnnnnntgattaatcctaagtgcttaattagtgagacaacaaatcttagaaaatggtggaaaagggcaataaaggaacggtggattcaacaaatgctagg |
200 |
Q |
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| T |
7951708 |
aaaaaatgattaatcctaagtgcttaattagtgagacaacaaatcttagaaaatggtggaaaagggcaataaaggaacggtggattcaacaaatgctagg |
7951609 |
T |
|
| Q |
201 |
cattgttcaaccgtactttgtattgtttgttaactttgttatgaatgaaatgtattaagtttggttttttagaaaataaaaaatgtattcacaagagagc |
300 |
Q |
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|||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
7951608 |
cattgttcaaccgtactttgtattgtttattagccttgttatgaatgaaatgtattaagtttggttttgcagaaaataaaaaatgtattcacaagagagc |
7951509 |
T |
|
| Q |
301 |
tatactctttcttatcc-ttttcttggtcaaatctt |
335 |
Q |
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||||||||||||||||| |||| ||||||||||||| |
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| T |
7951508 |
tatactctttcttatccttttttttggtcaaatctt |
7951473 |
T |
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