View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10164_low_10 (Length: 299)
Name: NF10164_low_10
Description: NF10164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10164_low_10 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
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| [»] scaffold0373 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 4335286 - 4335022
Alignment:
| Q |
11 |
caaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtacta |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335286 |
caaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtacta |
4335187 |
T |
|
| Q |
111 |
ggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335186 |
ggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
4335087 |
T |
|
| Q |
211 |
acagaaatattatagaaaacttacagataagcataaaaagaaaaacagaagcaattgcaacgtgtcaccaacc |
283 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335086 |
acagaaatattataga--------atataagcataaaaagaaaaacagaagcaattgcaacgtgtcaccaacc |
4335022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 4124080 - 4124319
Alignment:
| Q |
12 |
aaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactag |
111 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
4124080 |
aaaggctagtacaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagccttggacaatctttgagtaccag |
4124179 |
T |
|
| Q |
112 |
gttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaa |
211 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || |
|
|
| T |
4124180 |
cttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaag-aa |
4124278 |
T |
|
| Q |
212 |
cagaaatattatagaaaacttacagat-aagcataaaaaga |
251 |
Q |
| |
|
||||||||||||||| ||||| | ||| ||||||||||||| |
|
|
| T |
4124279 |
cagaaatattatagagaacttgcggataaagcataaaaaga |
4124319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 4361018 - 4360829
Alignment:
| Q |
11 |
caaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtacta |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||| | |||||||||||| ||||||||||| ||||||| |
|
|
| T |
4361018 |
caaaggctaatgcaatctttcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaatctcagacagccttggacaatctttaagtacta |
4360919 |
T |
|
| Q |
111 |
ggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcc |
200 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4360918 |
gcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagatattgagaatgactaagattgagaattttcagctgctccatcc |
4360829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 4344587 - 4344388
Alignment:
| Q |
11 |
caaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtacta |
110 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||| ||| || ||||||||||| | ||||| | |||||||||||| ||||||||||||||||||| |
|
|
| T |
4344587 |
caaaggctaatacaatttttcaaatttatcaaaagaattttgttgagatgtccaatactttgggaaatctcagacagccttggacaatctttgagtacta |
4344488 |
T |
|
| Q |
111 |
ggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4344487 |
gcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagacaatgagaatgactgagattgagaattttcagctgatccatcctctgcaagaa |
4344388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 4320759 - 4320987
Alignment:
| Q |
11 |
caaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtacta |
110 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||||| || ||||||||||| ||||||| |||| ||||||||| || ||||||| ||| |||| |
|
|
| T |
4320759 |
caaaggctaatacaatctttcaaatttatcaaaacaacttttttgagatgtccaatgctatgggaaacctgagacagccttgggcaatcttcgagcacta |
4320858 |
T |
|
| Q |
111 |
ggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||| ||||| |||| |||||||||||||||||| || |
|
|
| T |
4320859 |
gcttttcaagattaggcaagtatgaaaagtcaggggtctgtgtcaaatgatgagaatgactaagatttagaatcttcagctgctccatcctctgcaa-aa |
4320957 |
T |
|
| Q |
211 |
acagaaatattatagaaaacttacagataa |
240 |
Q |
| |
|
| | |||||||||||| || |||| ||||| |
|
|
| T |
4320958 |
ataaaaatattatagagaagttacggataa |
4320987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 4133565 - 4133762
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||| | || |||||||||||||| | |||||||| | ||||| ||||| |||||||| |||||||||||||| |||||||||||||||| ||| |
|
|
| T |
4133565 |
aaggctagtacagtctttcaaatttataatgagaactttatggagatgaccaatggtatgggaaacctcagacagccttggacaatctttgagtattagt |
4133664 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||||| |||||||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||||| ||| | | ||||| |||||||||||| |
|
|
| T |
4133665 |
ttttctagattaggcatgtgtgaaaaatctggggtctgtactagacaatgagaatgactaagattgagaaattttagattctccagcctctgcaagaa |
4133762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 6772964 - 6772870
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
186 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| | || | || ||| |||||||||||||| |||||||| |
|
|
| T |
6772964 |
ggacaattcttgagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaatttt |
6772870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 6532382 - 6532499
Alignment:
| Q |
21 |
tgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaag |
120 |
Q |
| |
|
|||| ||| |||||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| ||||||||||||| |||||||| |
|
|
| T |
6532382 |
tgcagtctgtcaaatttatcagaagaagtttttggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaag |
6532481 |
T |
|
| Q |
121 |
attaggcaagtatgaaaa |
138 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
6532482 |
attaggcatatatgaaaa |
6532499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 6621728 - 6621783
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||| |||||||| ||||| ||||| |||||||||| |||||||||||| ||||| |
|
|
| T |
6621728 |
ggacagtctttgagcactagcttttcgagattaggcatgtatgaaaaatctggggt |
6621783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 6650927 - 6650872
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
6650927 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6650872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 6815330 - 6815275
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||||| ||| || ||||| |
|
|
| T |
6815330 |
ggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggt |
6815275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 6498747 - 6498841
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
186 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||||||||||| | ||| || ||||| | | | || ||||||||||||||||| |||||||| |
|
|
| T |
6498747 |
ggacagtctttgagtactagcttttcaatattaggcaagtacgtaaagtctggggtttcaatcaaattctgagaatgactaagattaagaatttt |
6498841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 6837194 - 6837040
Alignment:
| Q |
32 |
aaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagt |
131 |
Q |
| |
|
|||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| |||||||||||||| ||||||||||| |||| | |
|
|
| T |
6837194 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
6837095 |
T |
|
| Q |
132 |
atgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
186 |
Q |
| |
|
|||| || || || || | || | || ||||||||||||||||| |||||||| |
|
|
| T |
6837094 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
6837040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 36213971 - 36214181
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||||| ||||||| ||||||||| | ||||||||| || ||||||||||| | ||||| |||||||||| || ||||||||| |||||||||| |
|
|
| T |
36213971 |
aaggctaatacaatcttccaaatttattagaagaactttattgagatgtccaatactgtgggaaacctcagacaatcttggacaatctgtgagtactagt |
36214070 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaac |
212 |
Q |
| |
|
|||||||| ||||||| || ||||||||| || |||| ||| |||||||||||||||||||||||||||||||||| || |||| |||||||||| ||| |
|
|
| T |
36214071 |
ttttcaaggttaggcatgtttgaaaaatctggagtctttgtcagataatgagaatgactaagattgagaattttcagcttttccagcctctgcaag-aac |
36214169 |
T |
|
| Q |
213 |
agaaatattata |
224 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
36214170 |
agaaatgttata |
36214181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 18935312 - 18935156
Alignment:
| Q |
26 |
tctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattag |
125 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||| |||| || |||| || ||| |||| || || ||||||||||||| || ||||||||||| | |
|
|
| T |
18935312 |
tctttcaaatttattaaaagaattttcttgagaagtcctatactatgagaaaccgaggacaaacttgggcaatctttgagtattaacttttcaagattcg |
18935213 |
T |
|
| Q |
126 |
gcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaa |
182 |
Q |
| |
|
|||||| |||||| | ||||| ||| | || | |||||||||||||||||| |||| |
|
|
| T |
18935212 |
gcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaa |
18935156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 188
Target Start/End: Original strand, 34724807 - 34724903
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttca |
188 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||||||||| || || || ||| | | | |||||||||||||||||| |||| ||||| |
|
|
| T |
34724807 |
ggacaatctttgagtattaacttttcaagatttggcaagtatgaaaagtctggtgtttgtttcaagttatgagaatgactaagattaagaaatttca |
34724903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 5690300 - 5690498
Alignment:
| Q |
12 |
aaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactag |
111 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| ||| | ||||||||||| ||||||| |||||| || ||| |||||||||||||||| ||| |
|
|
| T |
5690300 |
aaaggctaatacaatcttccaaatttatcagaagaattttgtcgagatgtccaatgctatgggaaacctcacgcaaccttggacaatctttgagtattag |
5690399 |
T |
|
| Q |
112 |
gttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||| | |||||| || ||||||||||| ||||||||||| |||||||||||||||||||| | || ||||||| ||| |||||| |
|
|
| T |
5690400 |
cttttcaagattaggcatgattgaaaagtctggggtctgtgtcagataatgagagtgactaagattgagaattttaagcttctccatcatctacaagaa |
5690498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 5128560 - 5128756
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||| ||| || |||||||| || || || |||||||||| | | | |||||||||||||||||| | |
|
|
| T |
5128560 |
aggctaatgcaatcttccaaatttatcagaagaattttattgagatgtccgatgctagtagaaacctcagacaacattgaacaatctttgagtactagct |
5128659 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||||||||||||| || |||||||| || ||||| ||||| ||| |||||||||||||| ||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
5128660 |
tttcaagattaggtaaatatgaaaagtctggggtgtgtgtcagacaatgagaatgactatgattgagaattttcagcttctccatcatctgcaagaa |
5128756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 5182069 - 5182279
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | ||| || |||| |||||| | ||||| || ||||||| | ||||||||||| ||||||||| |
|
|
| T |
5182069 |
aaggctaatgcaatcttccaaatttatcaaaagtattttattgagatctccaatactttgggaaacttcagacaacttcggacaatctgtgagtactaac |
5182168 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaac |
212 |
Q |
| |
|
| |||||| |||||||||| |||||| || || |||| || ||| |||||||||||||||||||||||||||||| || ||||| |||||||||| ||| |
|
|
| T |
5182169 |
tgttcaaggttaggcaagtttgaaaagtctggagtctttgacagaaaatgagaatgactaagattgagaattttcagcttctccagcctctgcaag-aac |
5182267 |
T |
|
| Q |
213 |
agaaatattata |
224 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
5182268 |
agaaatgttata |
5182279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 5176678 - 5176481
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||||| ||||||| ||| ||||||| ||||| ||| | ||||||||||| ||||||| |||||| || ||| || |||||| |||||| || |
|
|
| T |
5176678 |
aaggctaatacaatcttccaagtttatcagaagaattttatcgagatgtccaatgctatgggaaacctcacgcaaccttgggcaatctatgagtataagc |
5176579 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||| || |||||| || ||||||| ||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
5176578 |
ttttcaagattaggcatgtttgaaaagtctggggtctctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaa |
5176481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 5354755 - 5354953
Alignment:
| Q |
12 |
aaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactag |
111 |
Q |
| |
|
||||| ||||||| ||||| |||||||||| ||||| ||| || ||||||||||| | | || || ||||| | | | ||||||||||||||||| || |
|
|
| T |
5354755 |
aaaggttaatgcagtctttgaaatttatcagaagaattttattgagatgtccaatgcttggagaaacttcagataacattggacaatctttgagtacaag |
5354854 |
T |
|
| Q |
112 |
gttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||||| ||||| ||| |||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
5354855 |
cttttcaagattaggcatgtaagaaaagtcaggggtatgtgtcagacaatgtgaatgactaagattgagaattttcagatgctccattctctgcaagaa |
5354953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 5074060 - 5074241
Alignment:
| Q |
23 |
caatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagat |
122 |
Q |
| |
|
||||||| ||||||||||| ||||| ||| || |||||| |||| |||| || ||||| |||| ||| ||||||||| |||||||||| | |||||||| |
|
|
| T |
5074060 |
caatcttccaaatttatcagaagaattttattgagatgttcaatactatgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagat |
5074159 |
T |
|
| Q |
123 |
taggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctg |
204 |
Q |
| |
|
||||||||| ||||||||| || || || || |||||||||||||||||||||||||| ||||||| || ||||| |||||| |
|
|
| T |
5074160 |
taggcaagtttgaaaaatctggagtttgcgtcagataatgagaatgactaagattgagtattttcagcttctccaacctctg |
5074241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 5278505 - 5278308
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||||| ||||||| ||| ||||||| ||||| ||| | |||| |||||| |||| || |||||| ||| ||| || |||||| |||||| || |
|
|
| T |
5278505 |
aaggctaatacaatcttccaagtttatcagaagaattttatcgagatatccaatgctatgagaaacctcacacaaccttgggcaatctatgagtataagc |
5278406 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||| || |||||| || ||||||| ||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
5278405 |
ttttcaagattaggcatgtttgaaaagtctggggtctctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaa |
5278308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 5447525 - 5447329
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||| ||| ||||||| ||||||||||| ||||| ||| || ||||||||||| || | || |||||||||| | | |||||||||||||||||||| | |
|
|
| T |
5447525 |
aggccaatacaatcttccaaatttatcagaagaattttattgagatgtccaatgctaggagaaacctcagacaacattggacaatctttgagtactagct |
5447426 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||||||||||||||||| ||||||| || ||| | | ||| ||| |||||||||||||||||||||| |||||| | ||||||||||||||||| |
|
|
| T |
5447425 |
tttcaagattaggcaagcatgaaaagtccgggatgtttgtcagacgatgagaatgactaagattgagatttttcagattttccatcctctgcaagaa |
5447329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 223
Target Start/End: Original strand, 5284550 - 5284740
Alignment:
| Q |
32 |
aaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagt |
131 |
Q |
| |
|
|||||||||||| || ||| || |||| |||||| || | || |||||||| ||||| |||||||||||||| ||||| |||||||||||||||| || |
|
|
| T |
5284550 |
aaatttatcaaagcaattttattgagatttccaatgctaggtgaaacctcagatagccttggacaatctttgagcactagcttttcaagattaggcatgt |
5284649 |
T |
|
| Q |
132 |
atgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattat |
223 |
Q |
| |
|
||||| |||||| | |||| |||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||| |
|
|
| T |
5284650 |
tcgaaaagtcagggcttcgtgtgagataatgggaatgactaagattgagaattttcagcttctccatcctctgcaag-aacataaatattat |
5284740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 5102820 - 5102953
Alignment:
| Q |
77 |
acctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagat |
176 |
Q |
| |
|
|||||||||| | | ||||||||||||||||| || || ||||||||||||||||||||||| |||||||| || || ||| |||||||||||||||||| |
|
|
| T |
5102820 |
acctcagacaacattggacaatctttgagtaccagcttctcaagattaggcaagtatgaaaagtcaggggtgtgcgtcagacaatgagaatgactaagat |
5102919 |
T |
|
| Q |
177 |
tgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||||| || |||| |||||||||||| |
|
|
| T |
5102920 |
ttagaattttcagcttttccaacctctgcaagaa |
5102953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 5147038 - 5147235
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||| ||| || |||| |||||| |||| || || ||||||| | | |||||||| ||||||||| |
|
|
| T |
5147038 |
aaggctagtacaatcttccaaatttatcagaagaattttattgagatatccaatactatgagaaacttcagacaacattggacaatcagagagtactagt |
5147137 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| ||||||||||||||||| | |||| | ||||||||||| | ||||||||| |||||||| ||||||||||| | || |||||||||||||||||| |
|
|
| T |
5147138 |
tgttcaagattaggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaa |
5147235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 224
Target Start/End: Complemental strand, 5396871 - 5396679
Alignment:
| Q |
31 |
caaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaag |
130 |
Q |
| |
|
||||||||| | ||| | ||| || |||| |||||| ||||||| || || |||| | | |||||||| ||| |||||| | |||||||||||||| | |
|
|
| T |
5396871 |
caaatttattagaagtatttttttcagatctccaatattatgggaaacttctgacaactttggacaatcagtgactactagttgttcaagattaggcatg |
5396772 |
T |
|
| Q |
131 |
tatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattata |
224 |
Q |
| |
|
| |||||| || ||||||||||| | |||||||||||||||||||||||||||||||| || ||||| |||||||||| |||| |||||||||| |
|
|
| T |
5396771 |
tttgaaaagtctggggtctgtgtcaaataatgagaatgactaagattgagaattttcagcttctccagcctctgcaag-aacataaatattata |
5396679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 5066915 - 5067033
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaact |
191 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||| |||||||| || | ||| |||||||||| |||||||| |||||||||| || |
|
|
| T |
5066915 |
ggacaatctttgagtactagcttttcaagattaggcatatatgaaaagtcaggggtgtgcatcagacaatgagaatggctaagatttagaattttcagct |
5067014 |
T |
|
| Q |
192 |
gctccatcctctgcaagaa |
210 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5067015 |
tttccatcctctgcaagaa |
5067033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 77 - 210
Target Start/End: Complemental strand, 5096583 - 5096450
Alignment:
| Q |
77 |
acctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagat |
176 |
Q |
| |
|
|||||||||| | | ||||||||||| ||||| || || ||||||||||||| ||||||||| || ||||| ||||| ||| |||||||||||||||||| |
|
|
| T |
5096583 |
acctcagacaacattggacaatctttaagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgtgtcagacaatgagaatgactaagat |
5096484 |
T |
|
| Q |
177 |
tgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||||| | ||||||||||||||||| |
|
|
| T |
5096483 |
ttagaattttcagtttttccatcctctgcaagaa |
5096450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 77 - 210
Target Start/End: Complemental strand, 5370446 - 5370313
Alignment:
| Q |
77 |
acctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagat |
176 |
Q |
| |
|
|||||||||||| | | ||||||||||||||||| |||||||| ||||||||||||||||| || ||||| || || ||| |||||||||||||||||| |
|
|
| T |
5370446 |
acctcagacagcattgaacaatctttgagtactaacttttcaagcttaggcaagtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagat |
5370347 |
T |
|
| Q |
177 |
tgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||| | || |||||| |||||||||| |
|
|
| T |
5370346 |
ttagaatttttagcttttccatcatctgcaagaa |
5370313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 5433973 - 5433777
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||| ||| ||||||| ||||||||||| ||||| || || ||||| ||||| || | || | |||||| || || ||||||||| ||||||||| | |
|
|
| T |
5433973 |
aggccaatacaatcttccaaatttatcagaagaatttcattgagatggccaatgctaggagaaatctcagaaagacttggacaatctgtgagtactaact |
5433874 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||||||||||||||| | |||||| || || || ||||| ||||||||| |||||||||| || |||||||||| || |||||| ||||||||||| |
|
|
| T |
5433873 |
tttcaagattaggcaaatttgaaaagtctggtgtttgtgtcagataatgacaatgactaaggttaagaattttcagcttctccattctctgcaagaa |
5433777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 5447095 - 5446899
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
||||||||||| |||| ||| ||||||| ||||| ||| || ||||||| || || | || |||||||||| | || ||||||||||||||||| | |
|
|
| T |
5447095 |
aggctaatgcagtcttccaagtttatcagaagaattttattgagatgtctgatgctaggtgaaacctcagacaacagtgggcaatctttgagtactagtt |
5446996 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||| |||||||||| || |||||| |||||| | ||||| ||||| || ||||| ||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
5446995 |
tttgaagattaggcgtgtttgaaaagtcagggctttgtgtgagatagtgcgaatggctaagattgagaatttttagcttctccatcctctgcaagaa |
5446899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 5257479 - 5257685
Alignment:
| Q |
16 |
gctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttt |
115 |
Q |
| |
|
|||||| ||||||| |||||||||||||| || |||||| |||| |||||| | || ||| ||| ||| | ||||||||||||||||||| ||| |
|
|
| T |
5257479 |
gctaatacaatcttccaaatttatcaaaacaattttcttgagatttccaatgcttgaagaaaccctagatagcattggacaatctttgagtactaacttt |
5257578 |
T |
|
| Q |
116 |
tcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacaga |
215 |
Q |
| |
|
||||||||||||| || ||||| |||||| | ||| ||| || | ||||||||||||||||||||||||| || |||||||||||||||| |||| | |
|
|
| T |
5257579 |
tcaagattaggcatgttggaaaagtcagggcttcttgtgagacaacgggaatgactaagattgagaattttcagcttctccatcctctgcaag-aacata |
5257677 |
T |
|
| Q |
216 |
aatattat |
223 |
Q |
| |
|
|||||||| |
|
|
| T |
5257678 |
aatattat |
5257685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 5157834 - 5157967
Alignment:
| Q |
77 |
acctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagat |
176 |
Q |
| |
|
|||||||||| | | ||||||||||||||||| || || ||||||||||||| ||||||||| || ||||| || || ||| |||||||||||||||||| |
|
|
| T |
5157834 |
acctcagacaacattggacaatctttgagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagat |
5157933 |
T |
|
| Q |
177 |
tgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
| |||||||| | || |||||| |||||||||| |
|
|
| T |
5157934 |
ttagaatttttagcttttccatcatctgcaagaa |
5157967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 5344799 - 5344603
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||| || |||| |||||| || | ||||| |||||| |||| |||||| |||| || | |||| ||| || |||||||| |||||||| | |
|
|
| T |
5344799 |
aggctaatacagtcttccaaattaatgagaagaattttcttgagatctccaatgctatgagaaatctcacacaaacttggacaatccacgagtactaact |
5344700 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||||||||||||| ||||| ||||| || ||||| ||| | || ||||||||||||||||||||||||||||||| || ||||||| |||| ||||| |
|
|
| T |
5344699 |
tttcaagattaggtaagtaagaaaagtccggggtttgtatcaggtaatgagaatgactaagattgagaattttcagcttctccatcatctgtaagaa |
5344603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 5383252 - 5383055
Alignment:
| Q |
26 |
tctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattag |
125 |
Q |
| |
|
|||| |||||| |||| ||||| |||||| |||| |||||| || | || ||||| |||| ||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
5383252 |
tcttccaaattaatcagaagaattttcttgagatctccaatgctaggagaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattag |
5383153 |
T |
|
| Q |
126 |
gcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattata |
224 |
Q |
| |
|
|||| | ||| || || |||||||| || ||||||||||||||||| || || ||||||| |||||||||||||||| |||| |||||||||| |
|
|
| T |
5383152 |
gcaaatttgagaagtctggggtctgcaccaggtaatgagaatgactaaggtttaggattttcagtatctccatcctctgcaag-aacataaatattata |
5383055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 5350254 - 5350160
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttca |
188 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||| || |||| ||||| ||| || ||||||||||||||| |||||||||| |
|
|
| T |
5350254 |
ggacaatctttgagtactagcttttcaagattaggcatgtatgaaaagtc--gggtgtgtgtcagacaacaagaatgactaagatttagaattttca |
5350160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 5244090 - 5244182
Alignment:
| Q |
94 |
acaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
186 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | || ||||||||| || ||||| || || ||| ||||||||||||||||||| |||||||| |
|
|
| T |
5244090 |
acaatctttgagtactagcttttcaagatttgacatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttt |
5244182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 5425783 - 5425655
Alignment:
| Q |
79 |
ctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattg |
178 |
Q |
| |
|
|||||||| | | |||||||||||||| || || |||||||||||||||| | ||| ||| |||||||| | || ||| ||||||||||||||||||| |
|
|
| T |
5425783 |
ctcagacaacattggacaatctttgagcaccagcttttcaagattaggcatgaatgtaaagtcaggggtgcgcgtcagacaatgagaatgactaagattt |
5425684 |
T |
|
| Q |
179 |
agaattttcaactgctccatcctctgcaa |
207 |
Q |
| |
|
|||||||||| || ||||||| |||||| |
|
|
| T |
5425683 |
agaattttcagcttttccatccactgcaa |
5425655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 8877548 - 8877351
Alignment:
| Q |
13 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
112 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| || ||| |||| || ||||| || | ||| || |||||||||||||||||||||||| |
|
|
| T |
8877548 |
aaggctaatacaatcttccaaatttatcaaaagaactttattcagaagtcctatagtatgcgaaatctctatcaacctcggacaatctttgagtactagc |
8877449 |
T |
|
| Q |
113 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
||||||||||||||||||| | |||| || || || ||||| |||| |||||| || ||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
8877448 |
ttttcaagattaggcaagtttaaaaagtctggagtttgtgtcagatgatgagagtggctaagattgagaatttttagcttctccatcctctgcaagaa |
8877351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 9121 - 9238
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaact |
191 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| || | | |||||||||||||||||||||||||||||||| || |
|
|
| T |
9121 |
ggacaatctttgagtactagcttttcaagattaggcaaatatgaaaagtctggggtatgcatcaaataatgagaatgactaagattgagaattttcagct |
9220 |
T |
|
| Q |
192 |
gctccatcctctgcaaga |
209 |
Q |
| |
|
| ||| ||||||||||| |
|
|
| T |
9221 |
tcgccagcctctgcaaga |
9238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 47986995 - 47987191
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||| || |||| ||||||||||| ||||| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| | |
|
|
| T |
47986995 |
aggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagct |
47987094 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||| |||||||||| || |||||| ||| || | |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
47987095 |
tttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
47987191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 47996282 - 47996478
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||| || |||| ||||||||||| ||||| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| | |
|
|
| T |
47996282 |
aggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagct |
47996381 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||| |||||||||| || |||||| ||| || | |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
47996382 |
tttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
47996478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 48005569 - 48005765
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||| || |||| ||||||||||| ||||| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| | |
|
|
| T |
48005569 |
aggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagct |
48005668 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||| |||||||||| || |||||| ||| || | |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
48005669 |
tttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
48005765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 48014854 - 48015050
Alignment:
| Q |
14 |
aggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggt |
113 |
Q |
| |
|
|||||||| || |||| ||||||||||| ||||| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| | |
|
|
| T |
48014854 |
aggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagct |
48014953 |
T |
|
| Q |
114 |
tttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
210 |
Q |
| |
|
|||| |||||||||| || |||||| ||| || | |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
48014954 |
tttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
48015050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 5047 - 5102
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
5047 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
5102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 8506 - 8561
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||||| ||| || ||||| |
|
|
| T |
8506 |
ggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggt |
8561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 6519 - 6464
Alignment:
| Q |
92 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
147 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
6519 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 9610 - 9456
Alignment:
| Q |
32 |
aaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagt |
131 |
Q |
| |
|
|||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| |||||||||||||| ||||||||||| |||| | |
|
|
| T |
9610 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
9511 |
T |
|
| Q |
132 |
atgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
186 |
Q |
| |
|
|||| || || || || | || | || ||||||||||||||||| |||||||| |
|
|
| T |
9510 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
9456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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