View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10164_low_23 (Length: 229)
Name: NF10164_low_23
Description: NF10164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10164_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 585186 - 585368
Alignment:
| Q |
6 |
actttccccgattgaatttcatatttccacaacgttaatttaagttttaaaatatatgcatcataatatgaaggnnnnnnnnntgcttctccaaacgagt |
105 |
Q |
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| T |
585186 |
actttccccgattgaatttcatatttccacaacgttaatttaagttttaaaatatatgcatcataatatgaag-aaaaaaaaatgcttctccaaacgagt |
585284 |
T |
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| Q |
106 |
tggaaaaccaccacttttgaaagggccaaatttttccaaagataactaaatattgcttcttcaatctacttaacttcccgcaat |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
585285 |
tggaaaaccaccacttttgaaagggccaaatttttccaaagataactaaatattgcttctccaatctacttaacttcccgcaat |
585368 |
T |
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