View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10164_low_25 (Length: 217)

Name: NF10164_low_25
Description: NF10164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10164_low_25
NF10164_low_25
[»] chr6 (5 HSPs)
chr6 (130-199)||(21857236-21857305)
chr6 (43-125)||(9737757-9737839)
chr6 (43-123)||(4897499-4897579)
chr6 (55-125)||(15045563-15045633)
chr6 (55-105)||(9981276-9981326)
[»] chr8 (15 HSPs)
chr8 (43-125)||(36776404-36776486)
chr8 (43-125)||(24053914-24053996)
chr8 (43-116)||(40587697-40587770)
chr8 (43-109)||(25346050-25346116)
chr8 (43-109)||(42245737-42245803)
chr8 (43-119)||(9472158-9472233)
chr8 (43-94)||(8760732-8760783)
chr8 (43-94)||(25836270-25836321)
chr8 (49-123)||(45434992-45435066)
chr8 (43-104)||(41972977-41973038)
chr8 (43-123)||(40616099-40616179)
chr8 (43-94)||(1942820-1942871)
chr8 (44-94)||(8162781-8162831)
chr8 (43-92)||(32844182-32844231)
chr8 (51-95)||(44389018-44389062)
[»] chr4 (22 HSPs)
chr4 (43-125)||(3757726-3757808)
chr4 (43-125)||(50119962-50120044)
chr4 (43-125)||(51347488-51347570)
chr4 (43-123)||(13171627-13171707)
chr4 (43-125)||(20588562-20588644)
chr4 (43-125)||(36743206-36743288)
chr4 (43-125)||(43021892-43021974)
chr4 (43-120)||(24547336-24547413)
chr4 (43-125)||(39406236-39406318)
chr4 (43-125)||(24948291-24948373)
chr4 (43-109)||(30529283-30529349)
chr4 (43-94)||(8956947-8956998)
chr4 (43-94)||(8986919-8986970)
chr4 (43-94)||(37349817-37349868)
chr4 (43-125)||(17730433-17730515)
chr4 (43-109)||(29712386-29712452)
chr4 (43-125)||(53991556-53991638)
chr4 (45-125)||(35716305-35716385)
chr4 (43-109)||(578609-578675)
chr4 (55-125)||(3821215-3821285)
chr4 (44-94)||(9888895-9888945)
chr4 (55-125)||(39716734-39716804)
[»] chr5 (14 HSPs)
chr5 (44-125)||(36886974-36887055)
chr5 (43-111)||(30754423-30754491)
chr5 (43-125)||(12592473-12592555)
chr5 (43-125)||(17643390-17643472)
chr5 (43-94)||(6305454-6305505)
chr5 (43-94)||(43138551-43138602)
chr5 (43-78)||(42977837-42977872)
chr5 (44-94)||(754450-754500)
chr5 (55-125)||(3088048-3088118)
chr5 (55-125)||(25698734-25698804)
chr5 (55-125)||(30140502-30140572)
chr5 (43-95)||(12422349-12422401)
chr5 (66-126)||(26602196-26602256)
chr5 (55-127)||(33709830-33709902)
[»] chr1 (13 HSPs)
chr1 (43-123)||(46626329-46626409)
chr1 (43-125)||(38894755-38894837)
chr1 (43-125)||(19322349-19322431)
chr1 (43-126)||(33075661-33075744)
chr1 (43-125)||(22198912-22198994)
chr1 (43-126)||(42678373-42678456)
chr1 (43-125)||(29844886-29844968)
chr1 (51-123)||(19400733-19400805)
chr1 (55-125)||(1367291-1367361)
chr1 (43-125)||(1826793-1826875)
chr1 (43-109)||(10766202-10766268)
chr1 (44-94)||(28570756-28570806)
chr1 (55-125)||(47134704-47134774)
[»] chr3 (10 HSPs)
chr3 (43-125)||(29530566-29530648)
chr3 (43-123)||(26102155-26102235)
chr3 (43-125)||(8528108-8528190)
chr3 (43-120)||(35855209-35855286)
chr3 (43-109)||(19368946-19369012)
chr3 (43-123)||(11955530-11955610)
chr3 (43-123)||(28981822-28981902)
chr3 (45-125)||(22473644-22473724)
chr3 (140-194)||(11650396-11650450)
chr3 (55-109)||(55297360-55297414)
[»] chr7 (12 HSPs)
chr7 (43-125)||(44804520-44804602)
chr7 (43-126)||(29467750-29467833)
chr7 (43-120)||(29684118-29684195)
chr7 (43-120)||(34872174-34872251)
chr7 (43-130)||(3791474-3791561)
chr7 (46-109)||(35157003-35157066)
chr7 (55-126)||(11840464-11840535)
chr7 (55-109)||(21600987-21601041)
chr7 (55-125)||(39276613-39276683)
chr7 (85-126)||(7857055-7857096)
chr7 (43-94)||(24684638-24684689)
chr7 (55-126)||(39651165-39651236)
[»] scaffold0009 (2 HSPs)
scaffold0009 (43-123)||(108549-108629)
scaffold0009 (55-125)||(225435-225505)
[»] chr2 (11 HSPs)
chr2 (43-125)||(10876576-10876656)
chr2 (43-114)||(19486200-19486271)
chr2 (43-123)||(17836969-17837049)
chr2 (43-125)||(32677188-32677270)
chr2 (43-123)||(9920914-9920994)
chr2 (43-96)||(19486116-19486169)
chr2 (43-116)||(42781020-42781093)
chr2 (58-109)||(18096507-18096558)
chr2 (55-125)||(28607221-28607291)
chr2 (55-124)||(9545792-9545861)
chr2 (55-123)||(2952759-2952827)
[»] scaffold0385 (1 HSPs)
scaffold0385 (43-109)||(8305-8371)
[»] scaffold0381 (1 HSPs)
scaffold0381 (44-94)||(9600-9650)
[»] scaffold0057 (1 HSPs)
scaffold0057 (55-125)||(20596-20666)


Alignment Details
Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 21857236 - 21857305
Alignment:
Q  130 atatgatactaataggactggtgaatgttcatcaggaagttacagaaaattaataagtaggaaaattact 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21857236 atatgatactaataggactggtgaatgttcatcaggaagttacagaaaattaataagtaggaaaattact 21857305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 9737757 - 9737839
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| ||||||| |||||| ||||||||||||  |  |||||||||||||  ||||||||||||||||||||||||||||    
T  9737757 ccaataaatagattatcaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatataga 9737839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 4897499 - 4897579
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    ||||||| |||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||    
T  4897499 ccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatata 4897579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 15045563 - 15045633
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||| ||||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  15045563 ttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 15045633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 9981276 - 9981326
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttc 105  Q
    |||||||||| |||||||||||||||  ||||||||||||||  |||||||    
T  9981276 ttaccaaattgccccttataggggtaaaatggtaaattcaatgaacatttc 9981326  T

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Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 36776486 - 36776404
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||||||||||||||||    
T  36776486 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatataga 36776404  T

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Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 24053996 - 24053914
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||| | |  |||||||||||||  ||||||||||||||||||||||||||||    
T  24053996 ccaataagtagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 24053914  T

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Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 40587697 - 40587770
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttatta 116  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||| ||||||| |||||||||||    
T  40587697 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacatttattttcttatta 40587770  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 25346116 - 25346050
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||||||||||||||| |||||||||| || |  |||||||||||||| ||||||||||||    
T  25346116 ccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcaatggacatttctttt 25346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 42245737 - 42245803
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    ||||||||||||||| |||||||||||||||||||| |  ||||| |||||||  ||||||||||||    
T  42245737 ccaataagtagattatcaaattaccccttataggggcaaaatggtgaattcaagtgacatttctttt 42245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 9472233 - 9472158
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagta 119  Q
    |||||||||||||||||||||| ||| |||||| || |  ||||||| |||||  ||||||||||||||||||||||    
T  9472233 ccaataagtagattaccaaattgccc-ttatagaggcaaaatggtaatttcaagggacatttcttttcttattagta 9472158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 8760783 - 8760732
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  8760783 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 8760732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 25836270 - 25836321
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  25836270 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 25836321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 45435066 - 45434992
Alignment:
Q  49 agtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||| ||||||||| ||| |  |||||||||||||  |||||   ||||||||||||||||||    
T  45435066 agtagattaccaaattgccccttataagggcaaaatggtaaattcaagtgacatggattttcttattagtatata 45434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 41973038 - 41972977
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacattt 104  Q
    ||||| |||||||||||||||| ||||||||||||| |  |||||||||||||  |||||||    
T  41973038 ccaattagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacattt 41972977  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 40616099 - 40616179
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    ||||| |||||||||||||||| || |||||||| | |  |||||||||||||  |||||   ||||||||||||||||||    
T  40616099 ccaattagtagattaccaaattgcctcttataggagcaaaatggtaaattcaagggacatggattttcttattagtatata 40616179  T

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Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 1942871 - 1942820
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| |||||||||| || |  ||||||||||||    
T  1942871 ccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattca 1942820  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 8162781 - 8162831
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  8162781 caataagtagattaccaaattgacccttataggggcaaaatggtaaattca 8162831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 32844231 - 32844182
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaatt 92  Q
    |||||||||||||||||||||| |||||||| |||| |  ||||||||||    
T  32844231 ccaataagtagattaccaaattgccccttatcggggcaaaatggtaaatt 32844182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 44389018 - 44389062
Alignment:
Q  51 tagattaccaaattaccccttataggggtatgatggtaaattcaa 95  Q
    |||||||||||||||||||||||| ||| |  |||||||||||||    
T  44389018 tagattaccaaattaccccttataagggaaaaatggtaaattcaa 44389062  T

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Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 3757808 - 3757726
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||||  |||||||||||||||||||||||||||    
T  3757808 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatgaacatttcttttcttattagtatataga 3757726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 50119962 - 50120044
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  |||||| |||||||||||||||||||||    
T  50119962 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacattccttttcttattagtatataga 50120044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 51347570 - 51347488
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| |||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||||||||||||||||    
T  51347570 ccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatataga 51347488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 13171707 - 13171627
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||| ||||||||||||||||||    
T  13171707 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatata 13171627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 20588644 - 20588562
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||||| |||||||||||| |||||||||| || |  ||||| |||||||  ||||||||||||||||||||||||||||    
T  20588644 ccaataagtggattaccaaattgccccttatagaggcaaaatggtgaattcaagggacatttcttttcttattagtatataga 20588562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 36743206 - 36743288
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| |||||||||| |  |  |||||||||| ||  ||||||||||||||||||||||||||||    
T  36743206 ccaataagtagattaccaaattgccccttatagagacaaaatggtaaatttaagggacatttcttttcttattagtatataga 36743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 43021974 - 43021892
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| | ||| |||| || | ||||||||||||||   |||||||||||||||||||||||||||    
T  43021974 ccaataagtagattaccaaattgcacctaatagaggcaagatggtaaattcaaggaacatttcttttcttattagtatataga 43021892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 24547413 - 24547336
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtat 120  Q
    ||||||| |||||||||||||| ||||||||||||  |  |||||||||||||  |||||||||||||||||||||||    
T  24547413 ccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtat 24547336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 39406236 - 39406318
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||||||||||||||||||||||||||||||||    |||||||||||||   |||||||||||  ||| ||||||||||    
T  39406236 ccaataagtagattaccaaattaccccttataggggctaaatggtaaattcaaggaacatttctttttatataagtatataga 39406318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 24948291 - 24948373
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||| ||||||| ||||||||||| | |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  24948291 ccaataagtagatttccaaattgccccttataggagcaaaatggtaaattcaaaggacatttctttttatataagtatataga 24948373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 30529283 - 30529349
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  || |||||||||    
T  30529283 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggatatttctttt 30529349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 8956998 - 8956947
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  8956998 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 8956947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 8986970 - 8986919
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  8986970 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 8986919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 37349868 - 37349817
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  37349868 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 37349817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 17730515 - 17730433
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||| |||||||||||||||| ||||||||||| | |  |||||||||||||   ||||||||||| | ||||| |||||||    
T  17730515 ccaattagtagattaccaaattgccccttataggagcaaaatggtaaattcaaagcacatttcttttttgattagcatataga 17730433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 29712452 - 29712386
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    ||||||| |||||||||||||| ||||||||||||| |  |||||||||| ||  ||||||||||||    
T  29712452 ccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacatttctttt 29712386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 53991556 - 53991638
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||| ||    |||||||||||  ||| ||||||||||    
T  53991556 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatataga 53991638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 35716305 - 35716385
Alignment:
Q  45 aataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||| ||||||||||||| |  ||||||||| ||    |||||||||||  ||| ||||||||||    
T  35716305 aataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatataga 35716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 578609 - 578675
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaat-agacatttctttt 109  Q
    ||||||||||||||||||||||  |||||||||||| |  |||||||| ||||| |||||||||||||    
T  578609 ccaataagtagattaccaaattgtcccttataggggcaaaatggtaaa-tcaatgagacatttctttt 578675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 3821215 - 3821285
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||||||||||| |  |||||||||||||  |||||| |||||  ||| ||||||||||    
T  3821215 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 3821285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 9888895 - 9888945
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  9888895 caataagtagattaccaaattgacccttataggggcaaaatggtaaattca 9888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 39716734 - 39716804
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  39716734 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 39716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 36886974 - 36887055
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||||||||||||||||    
T  36886974 caataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatataga 36887055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 30754491 - 30754423
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttct 111  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||    
T  30754491 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaaaggacatttcttttct 30754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 12592473 - 12592555
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| |||||||||||||||   |||||||||||   ||||||||||||  ||| ||||||||||    
T  12592473 ccaataagtagattaccaaattgccccttataggggtaaactggtaaattcatgggacatttctttttatataagtatataga 12592555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 17643390 - 17643472
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| |||||||||||||| ||||||||| ||| |  ||| |||||||||  ||||||| ||||||||||||||||||||    
T  17643390 ccaataaatagattaccaaattgccccttataagggcaaaatgataaattcaagggacatttattttcttattagtatataga 17643472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 6305454 - 6305505
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  6305454 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 6305505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 43138551 - 43138602
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  43138551 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattca 43138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 42977837 - 42977872
Alignment:
Q  43 ccaataagtagattaccaaattaccccttatagggg 78  Q
    |||||||||||||||||||||| |||||||||||||    
T  42977837 ccaataagtagattaccaaattgccccttatagggg 42977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 754450 - 754500
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  754450 caataagtagattaccaaattgacccttataggggcaaaatggtaaattca 754500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 3088048 - 3088118
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||||||||||| |  |||||||||||||  |||||| |||||  ||| ||||||||||    
T  3088048 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 3088118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 25698734 - 25698804
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  25698734 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 25698804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 30140572 - 30140502
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||| | ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  30140572 ttaccaaattacccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 30140502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 12422349 - 12422401
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaa 95  Q
    ||||| |||||||||||||||| ||||||||||||| |  |||||||| ||||    
T  12422349 ccaattagtagattaccaaattgccccttataggggcaaaatggtaaaatcaa 12422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 26602196 - 26602256
Alignment:
Q  66 ccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    ||||||||| |||||  |||||||||||||  ||||||||||||  ||| |||||||||||    
T  26602196 ccccttataagggtaaaatggtaaattcaagggacatttctttttatataagtatatagaa 26602256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 33709830 - 33709902
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaat 127  Q
    |||||||||| ||| |||||||||||  |||||||||||||  ||||||  ||||  ||| ||||||||||||    
T  33709830 ttaccaaattgccctttataggggtaaaatggtaaattcaagggacattaattttaatataagtatatagaat 33709902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 46626329 - 46626409
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||||||||||||||||    
T  46626329 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatata 46626409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 38894837 - 38894755
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||| |||||||  |||||||||||||||||||    
T  38894837 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacatttactttcttattagtatataga 38894755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 19322349 - 19322431
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||| ||||||||| ||||||||||||| |  |||||||||||||  ||||||| ||||||||||||||||||||    
T  19322349 ccaataagtagaataccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatataga 19322431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 33075661 - 33075744
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||  ||| |||||||||||    
T  33075661 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagaa 33075744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 22198912 - 22198994
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  ||| |||||||||  ||||||||||||  ||| ||||||||||    
T  22198912 ccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaagggacatttcttttaatataagtatataga 22198994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 42678456 - 42678373
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    ||||||||||||||| |||||| |||||||||||| ||  ||||||||||||   ||||||||||||  ||| |||||||||||    
T  42678456 ccaataagtagattatcaaattgccccttatagggataaaatggtaaattcatgggacatttctttttatataagtatatagaa 42678373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 29844886 - 29844968
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||| ||   ||||||||||||  ||| ||||||||||    
T  29844886 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatataga 29844968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 19400805 - 19400733
Alignment:
Q  51 tagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    ||||||||| |||||||||||||| ||| |  |||||||||||||  |||||   ||||||||||||||||||    
T  19400805 tagattaccgaattaccccttatatgggcaaaatggtaaattcaagggacatggattttcttattagtatata 19400733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 1367361 - 1367291
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  1367361 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 1367291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 1826875 - 1826793
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| |||||||||||||| |||||||||| |  |  |||||||||||||  |||||| |||||  ||| ||||||||||    
T  1826875 ccaataaatagattaccaaattgccccttatagagccaaaatggtaaattcaagggacattacttttaatataagtatataga 1826793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 10766268 - 10766202
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||| ||   ||||||||||||    
T  10766268 ccaataagtagattaccaaattgacccttataggggcaaaatggtaaatccataggacatttctttt 10766202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 28570806 - 28570756
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  28570806 caataagtagattaccaaattgacccttataggggcaaaatggtaaattca 28570756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 47134774 - 47134704
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||||||||||| |  |||||||||||||| |||||| | |||  ||| ||||||||||    
T  47134774 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacattaccttttatataagtatataga 47134704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 29530566 - 29530648
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||  |  |||||||||||||  ||||||||||||||||||||||||||||    
T  29530566 ccaataagtagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatataga 29530648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 26102155 - 26102235
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||| |||||||||||||||| |||||||||| |  |||||||||||||  ||||||||||||||||||||||||||    
T  26102155 ccaataagcagattaccaaattacctcttataggggcaaaatggtaaattcaaaggacatttcttttcttattagtatata 26102235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 8528108 - 8528190
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| || ||||||||||| ||||||||||||  |  |||||||||||||  ||||||||||||||||||||||||||||    
T  8528108 ccaataaatatattaccaaattgccccttatagggacagaatggtaaattcaagggacatttcttttcttattagtatataga 8528190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 35855286 - 35855209
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtat 120  Q
    ||||||| |||||||||||||| ||||||||||||| |  |||||||||| ||  |||||||||||||||||||||||    
T  35855286 ccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacatttcttttcttattagtat 35855209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 19368946 - 19369012
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||| ||||  ||||||||||||    
T  19368946 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaaatcaagggacatttctttt 19369012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 11955530 - 11955610
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||| ||   ||||||||||||  ||| ||||||||    
T  11955530 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatata 11955610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 28981822 - 28981902
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    ||||| ||| |||||||||||| ||||||||||||| |  |||||||||||||  |||||   ||||||||||||||||||    
T  28981822 ccaattagttgattaccaaattgccccttataggggcaaaatggtaaattcaagggacatggattttcttattagtatata 28981902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 22473724 - 22473644
Alignment:
Q  45 aataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||| ||||||||||||| |  ||||||||| ||    |||||||||||  ||| ||||||||||    
T  22473724 aataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatataga 22473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 11650450 - 11650396
Alignment:
Q  140 aataggactggtgaatgttcatcaggaagttacagaaaattaataagtaggaaaa 194  Q
    ||||||| |||||||||||||||||  | ||||||||||||||| ||||| ||||    
T  11650450 aataggaatggtgaatgttcatcagagacttacagaaaattaatgagtagaaaaa 11650396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 55297360 - 55297414
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||||||| |||||||||||  ||||||||||| |  ||||||||||||    
T  55297360 ttaccaaattaccctttataggggtaaaatggtaaattcgagggacatttctttt 55297414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 44804602 - 44804520
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    ||||||| |||||||||||||| ||||||||||||  |  |||||||||||||  ||||||||||||||||||||||||||||    
T  44804602 ccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatataga 44804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 29467833 - 29467750
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||  ||| |||||||||||    
T  29467833 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagaa 29467750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 29684118 - 29684195
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtat 120  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||||||||||   |||||||||||  |||||||||    
T  29684118 ccaattagtagattaccaaattgccccttataggggtaaaatggtaaattcaaggcacatttctttttatattagtat 29684195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 34872251 - 34872174
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtat 120  Q
    |||||||||||||||||||||| ||||||||||||  |  ||||||| |||||  |||||||||||||||| ||||||    
T  34872251 ccaataagtagattaccaaattgccccttatagggacaaaatggtaagttcaaaggacatttcttttcttactagtat 34872174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 3791561 - 3791474
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaataga 130  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||| ||   ||||||||||||  ||| |||||||||| ||||    
T  3791561 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccataggacatttcttttaatataagtatatagattaga 3791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 35157003 - 35157066
Alignment:
Q  46 ataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    ||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||    
T  35157003 ataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagtgacatttctttt 35157066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 11840464 - 11840535
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    |||||||||| ||||||||||||| |  |||||||||||||| ||||||||||||  ||  |||||||||||    
T  11840464 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatagaagtatatagaa 11840535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 21600987 - 21601041
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||| ||||||||||||| |  |||||||||||||| ||||||||||||    
T  21600987 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttctttt 21601041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 39276683 - 39276613
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||| ||||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  39276683 ttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 39276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 7857055 - 7857096
Alignment:
Q  85 ggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  7857055 ggtaaattcaagggacatttcttttcttattagtatatagaa 7857096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 24684638 - 24684689
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||| |||||||||| || |  ||||||||||||    
T  24684638 ccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattca 24684689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 39651165 - 39651236
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatagaa 126  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| |||||||||||    
T  39651165 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagaa 39651236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 108629 - 108549
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||| |||||||||||||||||||||||| |||  |  |||||||||||||  ||||||||||||||||||||||||||    
T  108629 ccaatacgtagattaccaaattaccccttatggggacaaaatggtaaattcaagggacatttcttttcttattagtatata 108549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 225505 - 225435
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||||||||||| |  |||||||||||||| ||||||||||||  ||| ||||||||||    
T  225505 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatataagtatataga 225435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 10876576 - 10876656
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| |||||||  |||| |  |||||||||||||  ||||||||||||||||||||||||||||    
T  10876576 ccaataagtagattaccaaattgcccctta--ggggcaaaatggtaaattcaagggacatttcttttcttattagtatataga 10876656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 19486271 - 19486200
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttat 114  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  |||||||||||||||||    
T  19486271 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttat 19486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 17837049 - 17836969
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||    
T  17837049 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatata 17836969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 32677188 - 32677270
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||||||||||||||| ||||||||||||| |  |||||||||||||  ||||||| ||||  ||| ||||||||||    
T  32677188 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttaatataagtatataga 32677270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 9920914 - 9920994
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||| ||   ||||||||||||  ||| ||||||||    
T  9920914 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatata 9920994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 19486116 - 19486169
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaat 96  Q
    |||||||||||||||||||||| ||||||||||||| |  ||| ||||||||||    
T  19486116 ccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaat 19486169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 42781093 - 42781020
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttatta 116  Q
    ||||||| |||||||||||||| ||||||| ||||  |  ||| |||||||||  |||||||||||||||||||    
T  42781093 ccaataaatagattaccaaattgccccttacagggacaaaatgataaattcaagggacatttcttttcttatta 42781020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 18096558 - 18096507
Alignment:
Q  58 ccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    ||||||||||||||||||||| |  |||||||||||||  ||||||||||||    
T  18096558 ccaaattaccccttataggggcaaaatggtaaattcaaaggacatttctttt 18096507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 28607291 - 28607221
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||||||||||  |  |||||||||||||| ||||||| ||||  ||| ||||||||||    
T  28607291 ttaccaaattgccccttatagggacaaaatggtaaattcaatggacatttattttaatataagtatataga 28607221  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 9545792 - 9545861
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatatag 124  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| |||||||||    
T  9545792 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatag 9545861  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 2952827 - 2952759
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatata 123  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||    
T  2952827 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatata 2952759  T

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Target: scaffold0385 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 8305 - 8371
Alignment:
Q  43 ccaataagtagattaccaaattaccccttataggggtatgatggtaaattcaatagacatttctttt 109  Q
    |||||||||||||||||||||| ||||||||||||| |  ||||||||||||   ||||||||||||    
T  8305 ccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatttctttt 8371  T

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Target: scaffold0381 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 9650 - 9600
Alignment:
Q  44 caataagtagattaccaaattaccccttataggggtatgatggtaaattca 94  Q
    |||||||||||||||||||||  |||||||||||| |  ||||||||||||    
T  9650 caataagtagattaccaaattgacccttataggggcaaaatggtaaattca 9600  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 20596 - 20666
Alignment:
Q  55 ttaccaaattaccccttataggggtatgatggtaaattcaatagacatttcttttcttattagtatataga 125  Q
    |||||||||| ||||| ||||||| |  |||||||||||||  ||||||||||||  ||| ||||||||||    
T  20596 ttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 20666  T

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