View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10164_low_3 (Length: 445)

Name: NF10164_low_3
Description: NF10164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10164_low_3
NF10164_low_3
[»] chr3 (42 HSPs)
chr3 (11-429)||(1121140-1121546)
chr3 (167-292)||(53996618-53996743)
chr3 (160-292)||(34420696-34420828)
chr3 (165-282)||(26573105-26573222)
chr3 (165-282)||(45620890-45621008)
chr3 (173-315)||(8247717-8247861)
chr3 (192-315)||(13628820-13628944)
chr3 (173-315)||(46421065-46421209)
chr3 (173-283)||(40272873-40272984)
chr3 (206-292)||(54374398-54374484)
chr3 (167-315)||(25944449-25944597)
chr3 (168-315)||(45948868-45949017)
chr3 (173-282)||(13730666-13730776)
chr3 (173-283)||(22609752-22609861)
chr3 (164-250)||(35417893-35417979)
chr3 (187-315)||(29366750-29366879)
chr3 (164-237)||(53062015-53062088)
chr3 (206-315)||(516428-516539)
chr3 (192-284)||(5173781-5173872)
chr3 (206-278)||(39212009-39212081)
chr3 (206-292)||(1217109-1217192)
chr3 (164-283)||(29106526-29106645)
chr3 (173-250)||(10870045-10870123)
chr3 (210-280)||(54032623-54032693)
chr3 (187-283)||(22122978-22123072)
chr3 (206-263)||(30928228-30928285)
chr3 (160-269)||(44403631-44403740)
chr3 (173-283)||(7696948-7697057)
chr3 (187-283)||(26869707-26869802)
chr3 (192-283)||(7942995-7943086)
chr3 (208-283)||(12914096-12914171)
chr3 (181-280)||(19730996-19731095)
chr3 (220-282)||(14986990-14987052)
chr3 (206-284)||(45139538-45139616)
chr3 (215-284)||(10795485-10795554)
chr3 (173-249)||(52926305-52926382)
chr3 (187-283)||(4495725-4495821)
chr3 (220-292)||(55401209-55401281)
chr3 (187-282)||(9607203-9607298)
chr3 (206-292)||(33926102-33926187)
chr3 (187-283)||(39203516-39203610)
chr3 (220-283)||(31592882-31592943)
[»] chr1 (51 HSPs)
chr1 (164-292)||(2435839-2435967)
chr1 (169-283)||(18724606-18724720)
chr1 (164-285)||(17470405-17470526)
chr1 (164-287)||(22327077-22327200)
chr1 (167-287)||(50811920-50812041)
chr1 (164-256)||(2435981-2436073)
chr1 (192-284)||(9939467-9939559)
chr1 (207-315)||(45264429-45264537)
chr1 (173-283)||(14617024-14617135)
chr1 (174-283)||(20036208-20036318)
chr1 (165-283)||(44485170-44485288)
chr1 (187-284)||(27201648-27201745)
chr1 (206-282)||(10668245-10668321)
chr1 (166-287)||(15511206-15511329)
chr1 (173-315)||(18944629-18944773)
chr1 (187-283)||(46248014-46248110)
chr1 (187-282)||(20004154-20004249)
chr1 (173-283)||(32632618-32632728)
chr1 (170-292)||(27136704-27136826)
chr1 (173-282)||(30395790-30395900)
chr1 (164-249)||(25554817-25554902)
chr1 (187-280)||(46991805-46991898)
chr1 (187-315)||(23768350-23768477)
chr1 (173-279)||(34725163-34725268)
chr1 (158-282)||(50760288-50760412)
chr1 (164-283)||(34679280-34679399)
chr1 (165-287)||(19701549-19701671)
chr1 (182-284)||(35117828-35117930)
chr1 (187-280)||(6925101-6925194)
chr1 (164-237)||(6983916-6983989)
chr1 (174-283)||(11596501-11596609)
chr1 (187-283)||(38478343-38478437)
chr1 (207-283)||(25468324-25468400)
chr1 (187-283)||(41319867-41319963)
chr1 (164-235)||(10378834-10378905)
chr1 (206-284)||(35005143-35005221)
chr1 (207-283)||(12126898-12126972)
chr1 (173-237)||(25290149-25290214)
chr1 (187-283)||(4430087-4430183)
chr1 (206-250)||(31272468-31272512)
chr1 (165-237)||(52910196-52910268)
chr1 (160-250)||(22930161-22930252)
chr1 (174-292)||(33222971-33223089)
chr1 (171-246)||(35019215-35019290)
chr1 (175-237)||(47214499-47214562)
chr1 (164-238)||(6358112-6358186)
chr1 (167-237)||(23371105-23371175)
chr1 (206-283)||(35253248-35253323)
chr1 (173-284)||(19932815-19932924)
chr1 (258-315)||(46859138-46859195)
chr1 (173-283)||(45812598-45812707)
[»] chr8 (36 HSPs)
chr8 (163-284)||(44781566-44781687)
chr8 (164-292)||(42083751-42083879)
chr8 (164-292)||(35105884-35106006)
chr8 (163-292)||(14018021-14018150)
chr8 (173-283)||(12670311-12670420)
chr8 (173-283)||(30454158-30454267)
chr8 (187-283)||(36720774-36720870)
chr8 (164-292)||(44742571-44742699)
chr8 (173-283)||(29521746-29521857)
chr8 (173-282)||(7136591-7136701)
chr8 (173-282)||(39461058-39461168)
chr8 (187-283)||(2626497-2626596)
chr8 (187-280)||(28817690-28817783)
chr8 (210-283)||(44530150-44530223)
chr8 (187-315)||(20284099-20284230)
chr8 (170-270)||(30962847-30962947)
chr8 (192-283)||(18164821-18164911)
chr8 (173-282)||(20869560-20869668)
chr8 (187-282)||(25250500-25250595)
chr8 (192-283)||(31457156-31457246)
chr8 (174-283)||(17823540-17823650)
chr8 (187-315)||(21070727-21070859)
chr8 (180-282)||(22598128-22598230)
chr8 (210-283)||(8897825-8897898)
chr8 (206-283)||(36918121-36918198)
chr8 (210-282)||(6760823-6760895)
chr8 (170-282)||(8484000-8484112)
chr8 (187-283)||(13160680-13160775)
chr8 (172-250)||(28407378-28407457)
chr8 (173-283)||(35261642-35261753)
chr8 (211-283)||(12625891-12625964)
chr8 (210-282)||(26954133-26954206)
chr8 (210-283)||(45071266-45071338)
chr8 (215-283)||(5135350-5135418)
chr8 (208-283)||(389642-389719)
chr8 (187-236)||(24245429-24245478)
[»] chr4 (54 HSPs)
chr4 (164-292)||(487187-487315)
chr4 (165-282)||(19027804-19027921)
chr4 (173-282)||(16408665-16408775)
chr4 (162-292)||(54175017-54175146)
chr4 (164-263)||(54966976-54967075)
chr4 (172-250)||(54640433-54640511)
chr4 (206-287)||(7038050-7038130)
chr4 (164-283)||(17043455-17043571)
chr4 (164-289)||(23580263-23580388)
chr4 (210-315)||(40915830-40915933)
chr4 (173-283)||(20224947-20225056)
chr4 (165-292)||(20908689-20908817)
chr4 (191-283)||(41018855-41018946)
chr4 (173-283)||(48598886-48598995)
chr4 (173-283)||(5648222-5648332)
chr4 (173-283)||(6430687-6430797)
chr4 (175-250)||(42164242-42164317)
chr4 (173-282)||(10660367-10660477)
chr4 (173-282)||(10874512-10874622)
chr4 (173-282)||(21646927-21647037)
chr4 (206-292)||(44357217-44357303)
chr4 (164-281)||(51420528-51420646)
chr4 (187-268)||(43035226-43035307)
chr4 (164-250)||(30496414-30496501)
chr4 (173-283)||(30639343-30639453)
chr4 (208-283)||(47443956-47444031)
chr4 (164-250)||(49938684-49938771)
chr4 (175-283)||(11054209-11054316)
chr4 (166-284)||(25343144-25343262)
chr4 (226-315)||(20639688-20639777)
chr4 (172-292)||(30581518-30581639)
chr4 (187-283)||(47528591-47528685)
chr4 (191-283)||(7385537-7385629)
chr4 (173-268)||(17315375-17315470)
chr4 (206-250)||(25463119-25463163)
chr4 (164-236)||(50856344-50856416)
chr4 (173-283)||(5306725-5306835)
chr4 (178-257)||(30690270-30690349)
chr4 (206-283)||(9832374-9832449)
chr4 (221-283)||(9987895-9987957)
chr4 (173-282)||(16911525-16911635)
chr4 (206-283)||(10380004-10380080)
chr4 (206-263)||(37494848-37494905)
chr4 (164-246)||(32629366-32629445)
chr4 (163-283)||(47441591-47441711)
chr4 (170-249)||(12257688-12257767)
chr4 (233-315)||(12711479-12711561)
chr4 (221-292)||(21489099-21489170)
chr4 (207-250)||(39077888-39077931)
chr4 (206-283)||(29207959-29208034)
chr4 (171-292)||(49938491-49938612)
chr4 (161-246)||(6966044-6966129)
chr4 (163-292)||(39029113-39029242)
chr4 (187-284)||(44363192-44363289)
[»] chr7 (48 HSPs)
chr7 (164-283)||(28362206-28362325)
chr7 (167-285)||(7644914-7645032)
chr7 (165-283)||(23419735-23419853)
chr7 (175-283)||(19426950-19427059)
chr7 (187-283)||(11617649-11617745)
chr7 (165-283)||(48123545-48123663)
chr7 (206-292)||(29907416-29907502)
chr7 (173-282)||(46354157-46354267)
chr7 (210-283)||(7879639-7879712)
chr7 (166-283)||(19265772-19265888)
chr7 (208-280)||(18512517-18512588)
chr7 (192-283)||(42391161-42391250)
chr7 (164-283)||(6736845-6736963)
chr7 (173-283)||(42798632-42798743)
chr7 (187-283)||(10693134-10693228)
chr7 (173-283)||(48735183-48735293)
chr7 (173-283)||(2541080-2541192)
chr7 (165-284)||(12473259-12473379)
chr7 (173-283)||(21172070-21172179)
chr7 (187-283)||(33871971-33872066)
chr7 (210-282)||(47716460-47716532)
chr7 (187-282)||(42805502-42805597)
chr7 (187-282)||(43557450-43557545)
chr7 (165-235)||(13805058-13805128)
chr7 (165-283)||(19266406-19266524)
chr7 (204-250)||(31591201-31591247)
chr7 (164-250)||(32233228-32233314)
chr7 (162-287)||(16341231-16341356)
chr7 (187-284)||(22699030-22699127)
chr7 (207-284)||(35203437-35203514)
chr7 (187-263)||(7193063-7193139)
chr7 (192-283)||(11741778-11741867)
chr7 (173-283)||(32758224-32758333)
chr7 (208-283)||(27629633-27629708)
chr7 (173-250)||(47077947-47078025)
chr7 (178-283)||(14099067-14099172)
chr7 (178-283)||(14409084-14409189)
chr7 (173-280)||(35334880-35334986)
chr7 (220-283)||(2662996-2663057)
chr7 (163-314)||(42101915-42102066)
chr7 (213-283)||(15108458-15108527)
chr7 (173-246)||(42495933-42496007)
chr7 (169-250)||(3469273-3469354)
chr7 (187-284)||(5180217-5180314)
chr7 (210-283)||(38262257-38262330)
chr7 (187-283)||(42476851-42476945)
chr7 (192-283)||(8149006-8149098)
chr7 (173-284)||(14732883-14732994)
[»] chr6 (22 HSPs)
chr6 (163-287)||(7947429-7947553)
chr6 (192-315)||(29355885-29356009)
chr6 (174-315)||(12221945-12222088)
chr6 (164-283)||(13905040-13905159)
chr6 (173-283)||(3815138-3815249)
chr6 (173-283)||(1346927-1347036)
chr6 (173-283)||(1354818-1354927)
chr6 (187-315)||(9161101-9161229)
chr6 (206-250)||(2166506-2166550)
chr6 (206-250)||(2178139-2178183)
chr6 (209-284)||(14553511-14553586)
chr6 (162-248)||(12889379-12889465)
chr6 (173-277)||(8409206-8409311)
chr6 (206-263)||(17432337-17432394)
chr6 (210-282)||(6024234-6024306)
chr6 (173-259)||(14975165-14975252)
chr6 (192-279)||(20400650-20400737)
chr6 (242-287)||(24751131-24751176)
chr6 (214-283)||(33138838-33138907)
chr6 (210-250)||(22967172-22967212)
chr6 (210-250)||(23821181-23821221)
chr6 (187-283)||(32728217-32728313)
[»] chr5 (32 HSPs)
chr5 (164-292)||(208980-209107)
chr5 (182-311)||(28516467-28516596)
chr5 (173-269)||(23974744-23974840)
chr5 (173-315)||(38879544-38879688)
chr5 (173-283)||(24448853-24448964)
chr5 (164-249)||(39301078-39301163)
chr5 (173-283)||(35710276-35710385)
chr5 (173-283)||(41014282-41014392)
chr5 (173-282)||(4619168-4619278)
chr5 (206-284)||(42924894-42924972)
chr5 (173-284)||(43334165-43334278)
chr5 (187-282)||(27328730-27328825)
chr5 (169-283)||(19143004-19143117)
chr5 (206-284)||(22187282-22187360)
chr5 (206-283)||(32703421-32703496)
chr5 (173-283)||(8170045-8170154)
chr5 (163-239)||(10634251-10634327)
chr5 (187-250)||(37024648-37024711)
chr5 (164-235)||(39079875-39079946)
chr5 (212-283)||(43574609-43574680)
chr5 (173-250)||(1565394-1565472)
chr5 (229-315)||(29334415-29334501)
chr5 (210-283)||(1405188-1405261)
chr5 (213-282)||(41425952-41426021)
chr5 (175-315)||(12006358-12006500)
chr5 (220-282)||(13801831-13801893)
chr5 (228-282)||(20135623-20135677)
chr5 (193-250)||(1850624-1850681)
chr5 (164-315)||(2838732-2838883)
chr5 (206-263)||(22025540-22025597)
chr5 (165-282)||(24903758-24903875)
chr5 (206-283)||(34074623-34074700)
[»] chr2 (36 HSPs)
chr2 (164-283)||(32781349-32781468)
chr2 (164-284)||(10543652-10543773)
chr2 (162-288)||(29419941-29420071)
chr2 (165-293)||(44521425-44521552)
chr2 (169-283)||(5450245-5450360)
chr2 (173-283)||(12023980-12024090)
chr2 (187-284)||(24200685-24200782)
chr2 (166-282)||(4516413-4516529)
chr2 (173-315)||(14530281-14530425)
chr2 (173-283)||(8455377-8455488)
chr2 (173-283)||(11514399-11514510)
chr2 (167-283)||(99326-99440)
chr2 (187-283)||(17667980-17668076)
chr2 (164-315)||(15296436-15296589)
chr2 (164-249)||(17380331-17380416)
chr2 (210-283)||(17623565-17623638)
chr2 (187-315)||(17896237-17896365)
chr2 (187-283)||(23397744-23397838)
chr2 (206-282)||(19614989-19615065)
chr2 (206-283)||(10546159-10546237)
chr2 (185-250)||(44604830-44604895)
chr2 (192-283)||(21779322-21779411)
chr2 (182-270)||(33795258-33795346)
chr2 (187-278)||(5841006-5841097)
chr2 (208-283)||(12315713-12315787)
chr2 (208-283)||(19977775-19977850)
chr2 (167-282)||(23145760-23145874)
chr2 (167-282)||(23557550-23557664)
chr2 (187-282)||(40416933-40417028)
chr2 (210-248)||(13245182-13245220)
chr2 (164-283)||(31821404-31821518)
chr2 (168-237)||(35017776-35017846)
chr2 (187-284)||(7214512-7214609)
chr2 (173-283)||(9671143-9671253)
chr2 (210-283)||(14444730-14444802)
chr2 (187-283)||(25249799-25249894)
[»] scaffold0049 (1 HSPs)
scaffold0049 (206-284)||(58974-59052)
[»] scaffold0258 (1 HSPs)
scaffold0258 (173-315)||(13054-13195)
[»] scaffold0187 (2 HSPs)
scaffold0187 (187-283)||(10111-10205)
scaffold0187 (187-283)||(20439-20533)
[»] scaffold0057 (2 HSPs)
scaffold0057 (210-283)||(46832-46905)
scaffold0057 (162-232)||(46995-47065)
[»] scaffold0311 (1 HSPs)
scaffold0311 (187-283)||(10788-10884)
[»] scaffold0254 (1 HSPs)
scaffold0254 (206-250)||(4154-4198)
[»] scaffold0168 (1 HSPs)
scaffold0168 (173-283)||(30542-30651)
[»] scaffold0223 (1 HSPs)
scaffold0223 (206-283)||(11128-11203)
[»] scaffold1176 (1 HSPs)
scaffold1176 (187-250)||(1679-1742)
[»] scaffold0116 (1 HSPs)
scaffold0116 (187-250)||(8869-8932)


Alignment Details
Target: chr3 (Bit Score: 354; Significance: 0; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 11 - 429
Target Start/End: Complemental strand, 1121546 - 1121140
Alignment:
Q  11 cataggttttattttttaggttagaaagcagattttgaattaactataaagctctatataaagctctatagggagagctttaccaccaattttgggtctt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| ||||||    
T  1121546 cataggttttattttttaggttagaaagcagattttgaattaactataaagctctata------------gggagagctttaccaccaattttaggtctt 1121459  T
Q  111 acccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1121458 acccgactcgagaaattagtctctacagttgtgtgcaaggaggatatataataaagggggagccttggcgcaacactaaatttgttgtccggtggctgaa 1121359  T
Q  211 aggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgc 310  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1121358 aggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaaaatggcgggagcctttctcagaccctgc 1121259  T
Q  311 gtatggttctcgagtacatgggccttagcctcaagatacatgatgtagtaactagtttgatccacaaaatacttcttccaaggctttgaccaaaattttc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1121258 gtatggttctcgagtacatgggccttagcctcaagatacatgatgtagtaactagtttgatccacaaaatacttcttccaaggctttgaccaaaattttc 1121159  T
Q  411 atcatttaggactagtaag 429  Q
    |||||||||||||||||||    
T  1121158 atcatttaggactagtaag 1121140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 292
Target Start/End: Complemental strand, 53996743 - 53996618
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    ||||||||||||||| ||| |||||||||||||   || ||||||||||||||||||||||| |||||||||| |||||||||| ||| | |||||| ||    
T  53996743 ggggagccttggcgctacggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T
Q  267 gcgtccaatacaccaaaatggcggga 292  Q
    || | |||||||||||||||| ||||    
T  53996643 gcttacaatacaccaaaatggtggga 53996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 292
Target Start/End: Complemental strand, 34420828 - 34420696
Alignment:
Q  160 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 259  Q
    ||||||||||| |||||||||||||  |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||    
T  34420828 aataaagggggggccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaggg 34420729  T
Q  260 taagactgcgtccaatacaccaaaatggcggga 292  Q
    |||| |||||| | |||||||||||||| ||||    
T  34420728 taaggctgcgtaccatacaccaaaatggtggga 34420696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 26573105 - 26573222
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||||| ||| | ||||||     
T  26573105 agggggacccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaagg 26573204  T
Q  265 ctgcgtccaatacaccaa 282  Q
    |||||| |||||||||||    
T  26573205 ctgcgtacaatacaccaa 26573222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 45621008 - 45620890
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaag 263  Q
    ||||||||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||| ||||||||| | |||||||| || ||| | ||||||    
T  45621008 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaag 45620909  T
Q  264 actgcgtccaatacaccaa 282  Q
     |||||| |||||||||||    
T  45620908 gctgcgtacaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 8247861 - 8247717
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||     
T  8247861 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 8247762  T
Q  272 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||| ||||| |||| || ||| | |||||||||||||    
T  8247761 caatacaccaataatggtgggactccttcccggaccctgcgtatg 8247717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 13628944 - 13628820
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 290  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  13628944 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 13628845  T
Q  291 gagtctttctcagaccctgcgtatg 315  Q
    ||  | ||| | |||||||||||||    
T  13628844 gaccccttcccggaccctgcgtatg 13628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 46421209 - 46421065
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  46421209 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 46421110  T
Q  272 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  46421109 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 46421065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 40272984 - 40272873
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  40272984 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 40272885  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  40272884 caatacaccaaa 40272873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 54374484 - 54374398
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||||  ||||||||| |||||||||| |||||||||| ||||| |||||| |||||| |||| ||||||||||| ||||    
T  54374484 ctgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtggga 54374398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 315
Target Start/End: Original strand, 25944449 - 25944597
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||| | |||||||||||||||||  | ||| |||||| |||   || ||| ||    
T  25944449 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggct 25944548  T
Q  267 gcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    | || |||||||||||||||| ||||  | ||| | |||||||||||||    
T  25944549 gagtacaatacaccaaaatggtgggaccccttccctgaccctgcgtatg 25944597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 315
Target Start/End: Complemental strand, 45949017 - 45948868
Alignment:
Q  168 gggagccttggcgcaacgctaaatttgttgtccggtggctgaa---aggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    |||||||||||||||||| | || ||||| ||  ||| |||||   |||||||| |||||| ||||||||||||| |||||||||| ||||| ||||||     
T  45949017 gggagccttggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaagg 45948918  T
Q  265 ctgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    |||| | ||||||||| || ||| ||||  | ||||| |||||||||||||    
T  45948917 ctgcatacaatacacc-aattggtgggaccccttctcggaccctgcgtatg 45948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 13730776 - 13730666
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| ||     
T  13730776 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgta 13730677  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  13730676 caatacaccaa 13730666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 22609752 - 22609861
Alignment:
Q  173 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 272  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||| ||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  22609752 ccttggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtac 22609850  T
Q  273 aatacaccaaa 283  Q
    |||||||||||    
T  22609851 aatacaccaaa 22609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 35417893 - 35417979
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||||||||||||| |||| ||||| ||  ||| |||| |||||||| |||||| ||||||||||| | ||||||||||    
T  35417893 aagggggagccttggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaa 35417979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 29366879 - 29366750
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 285  Q
    |||| ||||||||  ||| || |||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| |||||| ||||||||||| |||    
T  29366879 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataat 29366780  T
Q  286 ggcgggagtctttctcagaccctgcgtatg 315  Q
    || ||||  | ||| | |||||||||||||    
T  29366779 ggtgggaccccttcccggaccctgcgtatg 29366750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 53062015 - 53062088
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    |||||||||  |||||||| || |||| ||||||||  ||| ||||||||||||||||||||||||||||||||    
T  53062015 aagggggaggattggcgcatcggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaaca 53062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 516428 - 516539
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc--aaaatggcgggagtctttctcag 303  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||  ||||| |||  ||||||||||||  | ||| | |    
T  516428 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccg 516527  T
Q  304 accctgcgtatg 315  Q
    ||||||||||||    
T  516528 accctgcgtatg 516539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 5173872 - 5173781
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| || |||||  ||| | |||||||||||||    
T  5173872 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aaacaaagtaaggttgcatgcaatacaccaaaa 5173781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 39212009 - 39212081
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 278  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||||  || ||||||||||||||| |||||||    
T  39212009 ctgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 1217109 - 1217192
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||| |||||||||||    
T  1217109 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacacc-aaatggcggga 1217192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 29106526 - 29106645
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||| ||||||||||| ||||  |||||||  |||||| |||| ||||| || |||||| || ||||||| |||||||||| ||||| | ||||    
T  29106526 aagggggagctttggcgcaacggtaaaaatgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataag 29106625  T
Q  264 actgcgtccaatacaccaaa 283  Q
      | ||| ||||||||||||    
T  29106626 gttacgtacaatacaccaaa 29106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 10870123 - 10870045
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  10870123 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 10870045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 54032693 - 54032623
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||| | |||||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc 54032623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 22123072 - 22122978
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||||  ||| |||||||||| || ||||||||||||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  22123072 taaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 22122978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 30928285 - 30928228
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||    
T  30928285 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaag 30928228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 44403740 - 44403631
Alignment:
Q  160 aataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 259  Q
    ||||||||||||||||||| |||||| |||| || |||||  |||||| |||||||||  ||| ||||||||| || | | |||||||||| | | ||||    
T  44403740 aataaagggggagccttggtgcaacggtaaagttattgtcacgtggctaaaaggtcacaggttaaagtcctgggaatagcctcttgtgtaaaagacaagg 44403641  T
Q  260 taagactgcg 269  Q
    |||| |||||    
T  44403640 taaggctgcg 44403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 7697057 - 7696948
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||||||||||   |||||||||  ||| | |||||| ||||||     
T  7697057 ccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgta--aaacagggtaaggctgcgta 7696960  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  7696959 caatacaccaaa 7696948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 26869707 - 26869802
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||| |||||| ||| | |||||| |||||| ||||||||||||    
T  26869707 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 26869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 7942995 - 7943086
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||| ||| ||| | ||||||||||||| ||||||| ||||    
T  7942995 ttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaa 7943086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 12914171 - 12914096
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||  |||||||||||||||||| | |||||||||| ||| | |||||| | |||| ||||||||||||    
T  12914171 gaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaaa 12914096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 19730996 - 19731095
Alignment:
Q  181 caacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    ||||| |||||||||||||  |||  ||||||||||||  | ||||||||||||| | | |||||||||| ||| ||||||||  ||||| |||||||||    
T  19730996 caacggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc 19731095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 14986990 - 14987052
Alignment:
Q  220 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 14987052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 45139616 - 45139538
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||| | | | |||||| |||| | |||||||||||||    
T  45139616 ctgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaa 45139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 10795554 - 10795485
Alignment:
Q  215 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| |||||||||||||||||| | |||||||||| | | | |||||| |||||| |||||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaa 10795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 52926382 - 52926305
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 249  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||    
T  52926382 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 4495821 - 4495725
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||| ||| | | | |||||||| ||| | |||||| |||||| ||||||||||||    
T  4495821 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 4495725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 55401209 - 55401281
Alignment:
Q  220 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    |||||||||||| ||||| | |||||||||| ||| | | |||||||||||  ||||||||||||||| ||||    
T  55401209 gttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtggga 55401281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 9607203 - 9607298
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| |||||||||||   |||||||||||||||||| | ||||| |||| ||| | |||||| ||||||  ||||||||||    
T  9607203 taaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaa 9607298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 33926102 - 33926187
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||| | |||||||||||||||| | | |||||||||| ||| | |||||| ||| || |||||||||| ||||| ||||    
T  33926102 ctgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaa-aaacagggtaaggctgtgtacaatacaccataatggtggga 33926187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 39203516 - 39203610
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||| |||||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  39203516 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 39203610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 31592882 - 31592943
Alignment:
Q  220 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 31592943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 2435967 - 2435839
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||| |||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| | ||||| ||||||    
T  2435967 aagggggggccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaag 2435868  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| |||||||||||||||| ||||    
T  2435867 cctgcgtacaatacaccaaaatggtggga 2435839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 18724720 - 18724606
Alignment:
Q  169 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 268  Q
    |||| |||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||     
T  18724720 ggagacttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 18724621  T
Q  269 gtccaatacaccaaa 283  Q
    || ||||||||||||    
T  18724620 gtacaatacaccaaa 18724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 17470526 - 17470405
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||||| |||||| |||| ||||||||  ||| ||||| ||||| | ||||||||||| |||||| | |||||||||| ||| | ||||||    
T  17470526 aagggggagccttggtgcaacggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaag 17470427  T
Q  264 actgcgtccaatacaccaaaat 285  Q
     |||||| ||||||||||||||    
T  17470426 gctgcgtacaatacaccaaaat 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 22327077 - 22327200
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||| |||||||||||||||||  ||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | ||||||    
T  22327077 aaggtggagccttggcgcaacggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 22327176  T
Q  264 actgcgtccaatacaccaaaatgg 287  Q
     ||| || | || |||||||||||    
T  22327177 gctgtgtacgatgcaccaaaatgg 22327200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 50811920 - 50812041
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagac 265  Q
    ||||||||||||||||||| |||| ||||||||  ||| |||||||||||||   ||| |||||||||||| |||||||||| || ||| | ||||||      
T  50811920 ggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggt 50812019  T
Q  266 tgcgtccaatacaccaaaatgg 287  Q
    ||||| ||||||||||||||||    
T  50812020 tgcgtacaatacaccaaaatgg 50812041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 2436073 - 2435981
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata 256  Q
    ||||||| ||||||| |||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||| || ||||||| |||||    
T  2436073 aagggggggccttggtgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 9939467 - 9939559
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | ||||||  ||||| |||||||||||||    
T  9939467 ttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaa 9939559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 45264537 - 45264429
Alignment:
Q  207 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagacc 306  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || ||| |  ||||| ||| || |||||||||||||||| ||||  | ||||||||||    
T  45264537 tgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaaaatggtgggaccccttctcagacc 45264438  T
Q  307 ctgcgtatg 315  Q
    |||| ||||    
T  45264437 ctgcatatg 45264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 14617024 - 14617135
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||  || ||||||||  |||||     
T  14617024 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgta 14617123  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  14617124 caatacaccaaa 14617135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 20036208 - 20036318
Alignment:
Q  174 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtcc 272  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||||  |||||||| |||| | | ||||||| ||||| |    
T  20036208 cttggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttc 20036307  T
Q  273 aatacaccaaa 283  Q
    |||||||||||    
T  20036308 aatacaccaaa 20036318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 44485288 - 44485170
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||||||||||||||||  |||| ||||||||  |||  |||||||||||| |||  |||||||||||||||  ||||||||| | | | ||||||     
T  44485288 agggggagccttggcgcaacagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaagg 44485189  T
Q  265 ctgcgtccaatacaccaaa 283  Q
    |||||| ||||||||||||    
T  44485188 ctgcgtacaatacaccaaa 44485170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 27201648 - 27201745
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||| ||||| | |||||| |||||| |||||||||||||    
T  27201648 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaa 27201745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 10668245 - 10668321
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||  ||||| |||||||||||    
T  10668245 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaa 10668321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 287
Target Start/End: Complemental strand, 15511329 - 15511206
Alignment:
Q  166 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 265  Q
    |||||||||||||||||| | |||| |||||||   |||||||||||||||| | || |||||||||||||  | |||||||||| ||| | |||||| |    
T  15511329 gggggagccttggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggc 15511230  T
Q  266 tgcg--tccaatacaccaaaatgg 287  Q
    ||||  | ||||||||||||||||    
T  15511229 tgcggatacaatacaccaaaatgg 15511206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 315
Target Start/End: Original strand, 18944629 - 18944773
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||| |||||||||| | |||||||||| ||| | |||||| ||||||     
T  18944629 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 18944728  T
Q  272 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  18944729 caatacaccaacaatggtgggaccccttcccggaccctgcgtatg 18944773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 46248110 - 46248014
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| |||||| |||||| ||||||||| |||||||| | |||||||||| ||| | ||||||||||||| ||||||||||||    
T  46248110 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 46248014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 20004249 - 20004154
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||| |||||| ||| |||||||| |||||| |||||||||||    
T  20004249 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20004154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 32632728 - 32632618
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  32632728 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 32632630  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  32632629 caatacaccaaa 32632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 292
Target Start/End: Complemental strand, 27136826 - 27136704
Alignment:
Q  170 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 269  Q
    |||||||||| ||||| |||| ||||||||  |||  || |||| |||| |||||||| |||| |||||| |||||||||| ||| | ||||||  ||||    
T  27136826 gagccttggcacaacggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcg 27136727  T
Q  270 tccaatacaccaaaatggcggga 292  Q
    | |||||||||||||||| ||||    
T  27136726 tacaatacaccaaaatggtggga 27136704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 30395900 - 30395790
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||  ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  30395900 ccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 30395801  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  30395800 caatacaccaa 30395790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 25554902 - 25554817
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 249  Q
    |||| ||||||||||||||| | |||| ||||||||  ||| || ||||| |||||||| |||||||||||||||| |||||||||    
T  25554902 aaggaggagccttggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgta 25554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 46991805 - 46991898
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||| || |||||||||    
T  46991805 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgtacaatacacc 46991898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 23768477 - 23768350
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatg 286  Q
    |||| ||||||||  ||| ||| ||||||||  ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| ||||||||| |||||    
T  23768477 taaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc-aaatg 23768379  T
Q  287 gcgggagtctttctcagaccctgcgtatg 315  Q
    | ||||  | ||| |||||||||||||||    
T  23768378 gtgggacaccttcccagaccctgcgtatg 23768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 34725268 - 34725163
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  34725268 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 34725171  T
Q  272 caatacac 279  Q
    ||||||||    
T  34725170 caatacac 34725163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 50760412 - 50760288
Alignment:
Q  158 ataataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 257  Q
    |||||||| ||||||||||||||||| | |||| | ||||||  ||| |||| |||||||| |||||||||||| ||||| | |||||||||  |||       
T  50760412 ataataaaaggggagccttggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactg 50760313  T
Q  258 ggtaagactgcgtccaatacaccaa 282  Q
    |||||| ||||||  ||||||||||    
T  50760312 ggtaaggctgcgtataatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 34679399 - 34679280
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||| ||||||||||| |||| || |||||  ||| ||||||  |||| ||||| | |||| |||||||| |||||||||| ||| | ||||||    
T  34679399 aagggggagctttggcgcaacggtaaagttattgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaag 34679300  T
Q  264 actgcgtccaatacaccaaa 283  Q
    ||||||| | ||||| ||||    
T  34679299 actgcgtactatacatcaaa 34679280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 19701549 - 19701671
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||||||||||||||||  |||| ||||||||  ||| |||||| |||||| ||| ||||| || ||||| | |||||||||| |||   ||||||     
T  19701549 agggggagccttggcgcaacagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaagg 19701648  T
Q  265 ctgcgtccaatacaccaaaatgg 287  Q
     || || ||||||||||||||||    
T  19701649 atgggtacaatacaccaaaatgg 19701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 35117930 - 35117828
Alignment:
Q  182 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 281  Q
    |||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| | | | |||||| ||| || ||||||||||    
T  35117930 aacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacacca 35117831  T
Q  282 aaa 284  Q
    |||    
T  35117830 aaa 35117828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 6925101 - 6925194
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||||| |||||| |||||  |||||||||    
T  6925101 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacacc 6925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 6983989 - 6983916
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    ||||| |||||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||    
T  6983989 aagggagagccttggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 6983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 11596501 - 11596609
Alignment:
Q  174 cttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 273  Q
    |||||||||||| |||| | | ||||  ||| |||||| |||||| ||||||||||| |||||||| |||||||||| ||| | |||||| ||||||  |    
T  11596501 cttggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaa-aaacagggtaaggctgcgtata 11596599  T
Q  274 atacaccaaa 283  Q
    ||||||||||    
T  11596600 atacaccaaa 11596609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 38478437 - 38478343
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  38478437 taaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 38478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 25468400 - 25468324
Alignment:
Q  207 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||| | |||||||||||||||||||| |||||||||| ||  | ||||||  ||||| ||||||||||||    
T  25468400 tgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaa 25468324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 41319963 - 41319867
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||  ||| ||||||||||||||   |||||||||| ||| | |||||| |||||| ||||||||||||    
T  41319963 taaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 41319867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 10378905 - 10378834
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 235  Q
    |||||| |||||||| |||||| |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  10378905 aaggggaagccttggtgcaacggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 35005143 - 35005221
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||| ||| | |||||| |||| | |||||||||||||    
T  35005143 ctgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaa 35005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 12126972 - 12126898
Alignment:
Q  207 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  12126972 tgaaaggtcacgggtttaagttctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 12126898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 25290149 - 25290214
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  25290149 ccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 4430183 - 4430087
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| ||| ||||| || |||||   |||||||||| ||| | ||||||||||||| ||||||||||||    
T  4430183 taaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 4430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 31272512 - 31272468
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||    
T  31272512 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 31272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 52910196 - 52910268
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||||  |||||| || ||||||||    
T  52910196 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaaca 52910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 22930252 - 22930161
Alignment:
Q  160 aataaagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||| ||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | | ||||||||    
T  22930252 aatagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaa 22930161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 292
Target Start/End: Original strand, 33222971 - 33223089
Alignment:
Q  174 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 272  Q
    ||||||||||| | |||| ||||||||  ||| |||||||||||||  || ||||| |||||||| | |||||||||| ||| | || |||  ||||| |    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaa-aaacagggaaaggttgcgtac 33223069  T
Q  273 aatacaccaaaatggcggga 292  Q
    ||||||||||||||| ||||    
T  33223070 aatacaccaaaatggtggga 33223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 35019215 - 35019290
Alignment:
Q  171 agccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 246  Q
    ||||||||||||||| |||| ||||||||   || ||||||||||||   ||||||||||| ||||||| ||||||    
T  35019215 agccttggcgcaacggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgt 35019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 47214499 - 47214562
Alignment:
Q  175 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  47214499 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 6358112 - 6358186
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaa 238  Q
    |||||||||||||||||||||| |||||||||| ||   || ||||||||||||  |||||| || ||| |||||    
T  6358112 aagggggagccttggcgcaacggtaaatttgttttcacatgactgaaaggtcacaggttcaaatcttgggaacaa 6358186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 23371105 - 23371175
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    ||||||||||||||||||  |||| ||||| ||   || ||||||||||||| ||||||||||| ||||||    
T  23371105 ggggagccttggcgcaacagtaaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaaca 23371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 35253323 - 35253248
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||| ||||| ||||||||||| |||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  35253323 ctgaaagatcacgggttcaagtcctcgaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 35253248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 19932924 - 19932815
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | ||||||||  |||| ||||| | |||||||| ||| | |||||| ||||||     
T  19932924 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacct-ttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  272 caatacaccaaaa 284  Q
    |||||||||||||    
T  19932827 caatacaccaaaa 19932815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 46859138 - 46859195
Alignment:
Q  258 ggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||||| |||||||||||||||| |||| || || |||| || ||||||||    
T  46859138 ggtaagactgcgtacaatacaccaaaatggtgggactcattttcaggccttgcgtatg 46859195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 45812707 - 45812598
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||| |||||   |||||||||  ||| | |||||| |||| |     
T  45812707 ccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgta--aaagagggtaaggctgcata 45812610  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  45812609 caatacaccaaa 45812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 44781687 - 44781566
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    ||||||||||||||||||||||| |||| ||||||||  ||| ||||||| ||||| |||||||||||||||||||| |||||||||| | | | |||||    
T  44781687 aaagggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaa 44781588  T
Q  263 gactgcgtccaatacaccaaaa 284  Q
    | ||| || |||||||||||||    
T  44781587 ggctgtgtacaatacaccaaaa 44781566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 42083879 - 42083751
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | | |||||||| ||||  || |||    
T  42083879 aagggagagccttggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaag 42083780  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| || || |||||||||| ||||    
T  42083779 gctgcgtacagtataccaaaatggtggga 42083751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 292
Target Start/End: Original strand, 35105884 - 35106006
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||||||||||||| |      ||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||| | | |  |||||    
T  35105884 aagggggagccttggcgcaaag------ttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaag 35105977  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| |||||||||| ||||| ||||    
T  35105978 gctgcgtacaatacaccagaatggtggga 35106006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 14018150 - 14018021
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    ||||||||||||||||||||||| |||  ||||||||  |||  |||||||||| | ||||||||| ||||||||   |||||||||| ||| | ||| |    
T  14018150 aaagggggagccttggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtga 14018051  T
Q  263 gactgcgtccaatacaccaaaatggcggga 292  Q
    |||||||| |||||||| ||| ||| ||||    
T  14018050 gactgcgtacaatacactaaattggtggga 14018021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 12670420 - 12670311
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  12670420 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 12670323  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  12670322 caatacaccaaa 12670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 30454267 - 30454158
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |||||||| ||||||     
T  30454267 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaggtaaggctgcgta 30454170  T
Q  272 caatacaccaaa 283  Q
    | ||||||||||    
T  30454169 cgatacaccaaa 30454158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 36720774 - 36720870
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  36720774 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 36720870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 44742699 - 44742571
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||| |||||| |||||| |||| ||||||||  |||  || ||||||| | |||||||| ||||||||||  || ||||||| ||| | ||||||    
T  44742699 aagggggaaccttggtgcaacggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaag 44742600  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| |||||||||||||||| ||||    
T  44742599 gctgcgtacaatacaccaaaatggtggga 44742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 29521857 - 29521746
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  29521857 ccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgta 29521758  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  29521757 caatacaccaaa 29521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 7136701 - 7136591
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||| | |||||||||||||||||||| |||||||||| ||  | |||||| ||||||     
T  7136701 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgta 7136602  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  7136601 caatacaccaa 7136591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 39461168 - 39461058
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  | | ||||||||||||| |||||||||||||||||| | |||||||||| ||| |  ||||| ||||||     
T  39461168 ccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 39461069  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  39461068 caatacaccaa 39461058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 2626497 - 2626596
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||| ||   ||||||||||||| ||||||||||||    
T  2626497 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa 2626596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 28817783 - 28817690
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||    
T  28817783 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc 28817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 44530150 - 44530223
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| ||||||||| |||||||||| |||||||||| ||| | |||||| |||||| ||||||||||||    
T  44530150 aaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 44530223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 20284230 - 20284099
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa--ggtaagactgcgtccaatacaccaa-a 283  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||  |||||| |||||| ||||||||||| |    
T  20284230 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgtacaatacaccaata 20284131  T
Q  284 atggcgggagtctttctcagaccctgcgtatg 315  Q
    |||| ||||  | ||| | |||||||||||||    
T  20284130 atggtgggaccccttcccggaccctgcgtatg 20284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 30962947 - 30962847
Alignment:
Q  170 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 269  Q
    ||||||||||||||||  ||| ||||||||  |||  ||||||||||||  ||||||||||||||||| | |||||||||| ||||| ||| || |||||    
T  30962947 gagccttggcgcaacggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcg 30962848  T
Q  270 t 270  Q
    |    
T  30962847 t 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 18164911 - 18164821
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  ||||| ||||||||||||    
T  18164911 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggttgcgtacaatacaccaaa 18164821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 20869668 - 20869560
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  20869668 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 20869571  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  20869570 caatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 25250500 - 25250595
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||| |||||||| ||||||||||||||||||| | | |||||||| ||||| |||| | |||||| |||||||||||    
T  25250500 taaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgtacaatacaccaa 25250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 31457156 - 31457246
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||| |  ||| |||||| ||||||| ||||    
T  31457156 ttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaa-aaataggaaaaggctgcgtacaatacatcaaa 31457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 17823540 - 17823650
Alignment:
Q  174 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 272  Q
    ||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||  | | |||||||||||      
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgtaa 17823639  T
Q  273 aatacaccaaa 283  Q
    |||||||||||    
T  17823640 aatacaccaaa 17823650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 187 - 315
Target Start/End: Complemental strand, 21070859 - 21070727
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa---ggtaagactgcgtccaatacaccaa- 282  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| ||   |||||| |||||| |||||||||||     
T  21070859 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaat 21070760  T
Q  283 aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||| ||||  | ||| | |||||||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatg 21070727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 22598128 - 22598230
Alignment:
Q  180 gcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 279  Q
    |||||| |||| ||||||||   || ||||||||||||| |||||| ||||||||||||| |||||||||| ||| | |||||| ||  || ||||||||    
T  22598128 gcaacggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacac 22598227  T
Q  280 caa 282  Q
    |||    
T  22598228 caa 22598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 8897898 - 8897825
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| ||| ||||||||||||||||  ||||||||| ||||| |||||| || ||| ||||||||||||    
T  8897898 aaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaaa 8897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 36918121 - 36918198
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||| ||||||||| |||||||||| ||||| ||||| ||| | |||||| ||| || ||||||||||||    
T  36918121 ctgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaaa 36918198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 6760823 - 6760895
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| || ||| |||||||||||    
T  6760823 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaa 6760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 8484112 - 8484000
Alignment:
Q  170 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 269  Q
    |||||||||||||||| ||||   |||| |  ||| || ||| |||| | |||||||||||||||||||| |||||||||| ||| | || ||| |||||    
T  8484112 gagccttggcgcaacggtaaagcggttgccacgtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcg 8484013  T
Q  270 tccaatacaccaa 282  Q
    | |||||||||||    
T  8484012 tacaatacaccaa 8484000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 13160680 - 13160775
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  13160680 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 13160775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 28407378 - 28407457
Alignment:
Q  172 gccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | ||||||||||    
T  28407378 gccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 28407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 35261642 - 35261753
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||| ||||||||||   |||||||||| ||| | ||||||  |||||     
T  35261642 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgta 35261741  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  35261742 caatacaccaaa 35261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 12625891 - 12625964
Alignment:
Q  211 aggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||| | |||||||||||||||||| |||||||| || ||| | ||||||||||| | ||||||||||||    
T  12625891 aggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaaa 12625964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 26954133 - 26954206
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||| |||||||||||||||||| | |||||||| || ||| | |||||| |||||| |||||||||||    
T  26954133 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaa 26954206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 45071266 - 45071338
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| |||||||| ||||||||| | |||||||||| ||| | |||||| |||||| ||||||||||||    
T  45071266 aaggtcacgggttcaagttctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgtacaatacaccaaa 45071338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 5135418 - 5135350
Alignment:
Q  215 cacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || ||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaaa 5135350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 389642 - 389719
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt--aagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||| |||||||||||||||||| | ||||||||  || ||| | ||||||  ||||| ||||||||||||    
T  389642 gaaaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaaa 389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 24245429 - 24245478
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 236  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||    
T  24245429 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 487315 - 487187
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||| |||||||||||| |||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| |||||||||  ||| |||||||     
T  487315 aaggaggagccttggcgtaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaa 487216  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| |||||||| ||||||| ||||    
T  487215 gctgcgtacaatacactaaaatggtggga 487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 19027804 - 19027921
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    |||||||| |||| ||||| | || | ||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| ||| | ||||||     
T  19027804 agggggagtcttgacgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 19027903  T
Q  265 ctgcgtccaatacaccaa 282  Q
    |||||| |||||||||||    
T  19027904 ctgcgtacaatacaccaa 19027921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 16408775 - 16408665
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||||||||     
T  16408775 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 16408676  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  16408675 caatacaccaa 16408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 54175017 - 54175146
Alignment:
Q  162 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg-aaacaacttcttgtgtaagaaataaggt 260  Q
    |||||||||||||||||||||||| | || ||||||||  ||| |||||| ||||||  |||||||||||| ||||| | |||||||||| ||| | |||    
T  54175017 taaagggggagccttggcgcaacgat-aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaa-aaacagggt 54175114  T
Q  261 aagactgcgtccaatacaccaaaatggcggga 292  Q
    ||| |||||| |||||||||||||||| ||||    
T  54175115 aaggctgcgtacaatacaccaaaatggtggga 54175146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 54966976 - 54967075
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| |||||||||||| ||||||||| ||||||| ||| |||||||||| ||| | ||||||    
T  54966976 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 54640511 - 54640433
Alignment:
Q  172 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||||| |||| ||||||||  ||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  54640511 gccttggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaa 54640433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 7038050 - 7038130
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 287  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  7038050 ctgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaaatgg 7038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 17043571 - 17043455
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||| ||||||||||||   || ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| | | | ||||||    
T  17043571 aagggggagtcttggcgcaacg---aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaag 17043475  T
Q  264 actgcgtccaatacaccaaa 283  Q
     |||||| ||||||||||||    
T  17043474 gctgcgtacaatacaccaaa 17043455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 23580388 - 23580263
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||| ||||||||  ||||||||||| ||||||||  ||| ||||||||||||| |||||||| || |||| | | |||||||||| ||| | || |||    
T  23580388 aagggagagccttgatgcaacgctaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaag 23580289  T
Q  264 actgcgtccaatacaccaaaatggcg 289  Q
    |||||||   ||||||||||||||||    
T  23580288 actgcgtaggatacaccaaaatggcg 23580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 40915830 - 40915933
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctg 309  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| |||||||| |||||| ||||||||| |||||| ||||| | ||| | |||||||    
T  40915830 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacaaggtaaggctgcgtacaatacacc-aaatggtgggagcccttcccggaccctg 40915927  T
Q  310 cgtatg 315  Q
    ||||||    
T  40915928 cgtatg 40915933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 20224947 - 20225056
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||| | |||||||||||||||||||| |||||||||  ||| | |||||| ||||||     
T  20224947 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgta--aaacagggtaaggctgcgta 20225044  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  20225045 caatacaccaaa 20225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 292
Target Start/End: Complemental strand, 20908817 - 20908689
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaag-gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||||| ||||| |||| ||||||||  ||| ||||||  || || |||||||||| |||||||| | |||| | ||| ||| ||||||||    
T  20908817 agggggagccttggcacaacggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaag 20908718  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||||| |||||||||||||||| ||||    
T  20908717 gctgcgtacaatacaccaaaatggtggga 20908689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 41018946 - 41018855
Alignment:
Q  191 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||| || || |||||| || ||| ||||||||||||    
T  41018946 tttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa-aattagggtaaggctacgtacaatacaccaaa 41018855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 48598995 - 48598886
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  48598995 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 48598898  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  48598897 caatacaccaaa 48598886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 5648222 - 5648332
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  5648222 ccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 5648320  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  5648321 caatacaccaaa 5648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 6430797 - 6430687
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| ||||||     
T  6430797 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 6430699  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  6430698 caatacaccaaa 6430687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 42164317 - 42164242
Alignment:
Q  175 ttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||||| ||||||||||    
T  42164317 ttggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaa 42164242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 10660367 - 10660477
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10660367 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10660466  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  10660467 caatacaccaa 10660477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 10874512 - 10874622
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||| || ||||||||||||||||||||| |||| ||||| ||||| |||| | |||| |     
T  10874512 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10874611  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  10874612 caatacaccaa 10874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 21646927 - 21647037
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||  |||||||||||||||||| | |||||||||| ||||| |||||| ||||||     
T  21646927 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgta 21647026  T
Q  272 caatacaccaa 282  Q
    ||||| |||||    
T  21647027 caatataccaa 21647037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 44357217 - 44357303
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||| | ||||||||||| |||||||| | |||||||| |||||  |||||||  ||| |||||||||||||||||||||    
T  44357217 ctgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaatacaccaaaatggcggga 44357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 51420528 - 51420646
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    |||||||||||||||||||||| | || ||||||||  ||| |||||||||||  || |||||||| |||||||||| |||||||||  ||| | |||||    
T  51420528 aagggggagccttggcgcaacggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaa 51420627  T
Q  263 gactgcgtccaatacacca 281  Q
    | ||| || ||||||||||    
T  51420628 ggctgggtacaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 43035226 - 43035307
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 268  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| | |||||| ||||    
T  43035226 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 30496501 - 30496414
Alignment:
Q  164 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||| |||||||||||  ||||  ||||||||  ||| ||||||||||||||||||||||| |||||||| | ||||||||||    
T  30496501 aagggggagacttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaa 30496414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 30639343 - 30639453
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| ||||||     
T  30639343 ccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaa-aaacagggtaaggctgcgta 30639441  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  30639442 caatacaccaaa 30639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 47443956 - 47444031
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||| |||||||||||||||||| | ||||| |||| ||| | |||||| |||||| ||||||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaa 47444031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 49938771 - 49938684
Alignment:
Q  164 aagggggagccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||| |||||||||| ||||  ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||||||||    
T  49938771 aagggggagccctggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa 49938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 11054316 - 11054209
Alignment:
Q  175 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 273  Q
    |||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||| |||||   |||||||||  ||| | ||||||||||||| ||    
T  11054316 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgta--aaacagggtaagactgcgtaca 11054219  T
Q  274 atacaccaaa 283  Q
    ||||||||||    
T  11054218 atacaccaaa 11054209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 284
Target Start/End: Original strand, 25343144 - 25343262
Alignment:
Q  166 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 265  Q
    ||||||| |||||||||| | |||| ||||||||  ||| |||| |||||||  |||||||| ||||||| |   |||||||||| ||| | |||||| |    
T  25343144 gggggaggcttggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggc 25343243  T
Q  266 tgcgtccaatacaccaaaa 284  Q
    ||||| |||||||||||||    
T  25343244 tgcgtacaatacaccaaaa 25343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 315
Target Start/End: Complemental strand, 20639777 - 20639688
Alignment:
Q  226 gtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    |||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||||| ||||  | ||| | |||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatg 20639688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 30581639 - 30581518
Alignment:
Q  172 gccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 270  Q
    ||||||||||||||||||| ||||||||   |  || |||||||| | ||||||||| |||||||||| |||||||| || ||| | ||||||  || ||    
T  30581639 gccttggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgt 30581540  T
Q  271 ccaatacaccaaaatggcggga 292  Q
     |||||||||||||||| ||||    
T  30581539 acaatacaccaaaatggtggga 30581518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 47528685 - 47528591
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  47528685 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 47528591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 7385629 - 7385537
Alignment:
Q  191 tttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||  ||| ||||||||||||| ||||||| |||||||||| | || ||||||| ||||| ||||||  || || ||||||||||||    
T  7385629 tttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaa 7385537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 17315470 - 17315375
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 268  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||| |||| |||||||| |||||||||| ||| |||||||| ||||    
T  17315470 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaa-aaacaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 25463119 - 25463163
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  25463119 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 25463163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 50856416 - 50856344
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaac 236  Q
    |||||||||||||||||||||| |||| ||||||||   ||  |||||||||||| ||||||||||| |||||    
T  50856416 aagggggagccttggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 5306835 - 5306725
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||| ||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||  | ||||||  |||||     
T  5306835 ccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aatcagggtaaggttgcgta 5306737  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  5306736 caatacaccaaa 5306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 30690349 - 30690270
Alignment:
Q  178 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataa 257  Q
    ||||| ||||||| | ||||||  ||| ||||||||||||| |||||||||||||||| | | |||||||||| ||||||    
T  30690349 gcgcagcgctaaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataa 30690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 9832449 - 9832374
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||| |||||||||||| ||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  9832449 ctgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 9832374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 9987957 - 9987895
Alignment:
Q  221 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||||||||| ||||||||||  |||| |||||| |||| | ||||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaaa 9987895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 16911525 - 16911635
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| || |||||||||| ||||||||||| |||||| | |||||||||  ||  | |||||| ||||||     
T  16911525 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgta 16911624  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  16911625 caatacaccaa 16911635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 10380080 - 10380004
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||| ||||||||||||  ||||||| |||||||||| ||||| | ||| | ||||| ||||||||||||    
T  10380080 ctgaaaggtcacttgttcaagtcctacaaacaacctcttgtgtaa-aaataggataaaattgcgtacaatacaccaaa 10380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 37494848 - 37494905
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  37494848 ctgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 37494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 32629445 - 32629366
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 246  Q
    |||||||||||||||||||||| ||||   ||||||  ||| ||||||||||||| |||||| |||| |||||| | ||||||    
T  32629445 aagggggagccttggcgcaacggtaaa---gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgt 32629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 47441711 - 47441591
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    ||||| ||||| ||||||||||| |||| ||||||||  ||| ||||||||||||  ||||||||||  ||||||   |||| ||||| ||  | |||||    
T  47441711 aaaggaggagctttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaa 47441612  T
Q  263 gactgcgtccaatacaccaaa 283  Q
    | ||| || ||||||||||||    
T  47441611 ggctgtgtacaatacaccaaa 47441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 12257767 - 12257688
Alignment:
Q  170 gagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 249  Q
    |||||||| ||||||| |||| ||||||||  |||  |||||||||||| |||||| |||| |||||| | |||||||||    
T  12257767 gagccttgacgcaacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 12711561 - 12711479
Alignment:
Q  233 aaacaacttcttgtgtaagaaa-taaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||| |||||||||| ||| || ||||||||||||| ||||||||| |||||||||||  | ||||||||||  |||||||    
T  12711561 aaacaacatcttgtgtaaaaaaatagggtaagactgcgtacaatacacc-aaatggcgggaccccttctcagacctagcgtatg 12711479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 21489099 - 21489170
Alignment:
Q  221 ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||||||||| | ||||| |||| ||| |  |||||||||||| |||| ||||||||||| ||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaaaatggtggga 21489170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 39077931 - 39077888
Alignment:
Q  207 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||| |||||||||||||||||| | ||||||||||    
T  39077931 tgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 39077888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 29208034 - 29207959
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||| ||||||||||||||||   | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  29208034 ctgaaaggtcacgggttcaagtcctggaaattgcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 29207959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 49938612 - 49938491
Alignment:
Q  171 agccttggcgcaacgctaaat-ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 269  Q
    ||||||||||||||| ||||  ||||||||  ||| ||||||||||||   |||||||| ||||| || | | |||||||| ||| | |||||| |||||    
T  49938612 agccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaa-aaacagggtaaggctgcg 49938514  T
Q  270 tccaatacaccaaaatggcggga 292  Q
    |||||| || |||||||| ||||    
T  49938513 tccaattcatcaaaatggtggga 49938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 6966044 - 6966129
Alignment:
Q  161 ataaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 246  Q
    |||||| |||||||| | ||||||| |||| ||||||||   ||  ||| || ||||| ||||||||| |||||||||||||||||    
T  6966044 ataaagcgggagcctggacgcaacgataaagttgttgtcacatgagtgatagttcacgggttcaagtcttggaaacaacttcttgt 6966129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 39029242 - 39029113
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    ||||||||||||||   | |||| |||| ||||||||  ||| || ||||||||   ||||||| | |||||||| | |||||||||| ||| | |||||    
T  39029242 aaagggggagccttaaggaaacggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaa 39029143  T
Q  263 gactgcgtccaatacaccaaaatggcggga 292  Q
    | ||| || |||||||| ||||||| ||||    
T  39029142 ggctgtgtacaatacacgaaaatggtggga 39029113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 44363289 - 44363192
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||| ||||| | || ||||||| ||| | |||| | |||||| |||  ||||||||    
T  44363289 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaa 44363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 28362325 - 28362206
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||||||||||  ||||||||||| |||||  | |||||||||| |||   ||||||    
T  28362325 aagggggagccttggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaag 28362226  T
Q  264 actgcgtccaatacaccaaa 283  Q
     |||||| ||||||||||||    
T  28362225 gctgcgtacaatacaccaaa 28362206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 7644914 - 7645032
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    ||||||||||||||||  | ||||||||||||   ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||||      
T  7644914 ggggagccttggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagata 7645013  T
Q  267 gcgtccaatacaccaaaat 285  Q
    |||| ||||||||||||||    
T  7645014 gcgtacaatacaccaaaat 7645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 23419853 - 23419735
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||||||||||||||||| |||| ||| ||||  ||| || |||||||||  |||||||| ||||||||| | |||||||||| ||| | |||||||    
T  23419853 agggggagccttggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaaga 23419754  T
Q  265 ctgcgtccaatacaccaaa 283  Q
    |||||| ||||||||||||    
T  23419753 ctgcgtacaatacaccaaa 23419735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 19427059 - 19426950
Alignment:
Q  175 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcca 273  Q
    |||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | |||||||||| ||||| ||||||||||||| ||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtaca 19426960  T
Q  274 atacaccaaa 283  Q
    ||||||||||    
T  19426959 atacaccaaa 19426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 11617745 - 11617649
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||    
T  11617745 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 11617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 48123663 - 48123545
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||||||||||||||||| |||| ||||| ||  ||| ||||||||||| | |||||||||||||||||| | ||||||||||  || | ||||| |    
T  48123663 agggggagccttggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaa 48123564  T
Q  265 ctgcgtccaatacaccaaa 283  Q
    |||| | ||||||||||||    
T  48123563 ctgcatacaatacaccaaa 48123545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 29907416 - 29907502
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcggga 292  Q
    ||||||||||||| ||||||||||| |||||| | |||||||||| |||||  ||||| |||||| |||||||||||||||| ||||    
T  29907416 ctgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaaaatggtggga 29907502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 46354157 - 46354267
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  |||  || ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| ||||||     
T  46354157 ccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 46354256  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  46354257 caatacaccaa 46354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 7879639 - 7879712
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| |||||||||||||||||||  |||||||||| ||| |||||||| |||||| ||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaa 7879712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 19265772 - 19265888
Alignment:
Q  166 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 265  Q
    |||||||| ||||||||||| |||| ||||||||  ||| ||||||||||||| ||||||||| |||| ||| |  ||||||||| ||| | |||||| |    
T  19265772 gggggagcattggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaa-aaagagggtaaggc 19265870  T
Q  266 tgcgtccaatacaccaaa 283  Q
    ||||| ||||||||||||    
T  19265871 tgcgtacaatacaccaaa 19265888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 18512588 - 18512517
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacc 280  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||| |||||| |||||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaa-aaatagggtaaggctgcgtacaatacacc 18512517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 42391250 - 42391161
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| |||||||||||  ||| | |||||| |||||| ||||||||||||    
T  42391250 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 42391161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 164 - 283
Target Start/End: Original strand, 6736845 - 6736963
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||||||| | ||||  |||| ||||||||  | | ||||||||||||| |||||||||||  ||||||| |||||| ||| ||| ||||||||    
T  6736845 aagggggagccttgacacaacagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataa-aaacaaggtaag 6736943  T
Q  264 actgcgtccaatacaccaaa 283  Q
    ||||| | ||||||||||||    
T  6736944 actgcatacaatacaccaaa 6736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 42798632 - 42798743
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||| ||| |||||||| ||||||     
T  42798632 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgta 42798731  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  42798732 caatacaccaaa 42798743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 10693228 - 10693134
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  10693228 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaagagggtaaggctgcgtacaatacaccaaa 10693134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 48735293 - 48735183
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcc-tggaaacaacttcttgtgtaagaaataaggtaagactgcgt 270  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||| |||||||||| |||||||||  ||| | |||||| ||||||    
T  48735293 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgta--aaacacggtaaggctgcgt 48735196  T
Q  271 ccaatacaccaaa 283  Q
     ||||||||||||    
T  48735195 acaatacaccaaa 48735183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 2541192 - 2541080
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 270  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||    
T  2541192 ccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgt 2541093  T
Q  271 ccaatacaccaaa 283  Q
     | ||||||||||    
T  2541092 actatacaccaaa 2541080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 12473259 - 12473379
Alignment:
Q  165 agggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||| |||||||||||||| | |||| ||||||||  ||  ||||||||||| | |||||||||||| ||||||| |||||||| | ||| | ||||||    
T  12473259 aggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaag 12473358  T
Q  264 actgcgtccaatacaccaaaa 284  Q
      ||||| |||||||||||||    
T  12473359 gatgcgtacaatacaccaaaa 12473379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 21172179 - 21172070
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  21172179 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 21172082  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  21172081 caatacaccaaa 21172070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 33872066 - 33871971
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||| ||| | | |||| |||||| ||||||||||||    
T  33872066 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaa-aaacaggataaggctgcgtacaatacaccaaa 33871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 47716460 - 47716532
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||    
T  47716460 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 47716532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 42805502 - 42805597
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || |||||||||||    
T  42805502 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaa 42805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 43557450 - 43557545
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| |||||||||||    
T  43557450 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaa 43557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 13805058 - 13805128
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 235  Q
    ||||||||||||||||||| | |||| ||||||||  ||| ||||||||| ||| ||||||||||||||||    
T  13805058 agggggagccttggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 19266406 - 19266524
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    |||||||||||||| |||||| |||| ||||||||  ||| ||||||||||  | |||||||||||| ||| | |  |||| |||| ||| | ||||||     
T  19266406 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaagg 19266505  T
Q  265 ctgcgtccaatacaccaaa 283  Q
    |||||| ||||||||||||    
T  19266506 ctgcgtacaatacaccaaa 19266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 31591247 - 31591201
Alignment:
Q  204 ggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  31591247 ggctgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaa 31591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 32233314 - 32233228
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||| ||||||||||||   ||| ||||||||   || ||||||||||| | |||||||||||||||||||| ||||||||||    
T  32233314 aagggggacccttggcgcaacagaaaaattgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaa 32233228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 16341231 - 16341356
Alignment:
Q  162 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 261  Q
    |||||||| ||| |||| |||||| |||| ||||| ||  ||   |||||||||||| |||||||| || |||||| | |||||||||| ||| | ||||    
T  16341231 taaaggggcagcgttggagcaacggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta 16341330  T
Q  262 agactgcgtccaatacaccaaaatgg 287  Q
    || || ||| ||||||||||||||||    
T  16341331 aggctacgtacaatacaccaaaatgg 16341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 22699127 - 22699030
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| ||||||||| | | |||||||||||||||| |   |||||||||| ||| | ||||||||||||| |||||||||||||    
T  22699127 taaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaa 22699030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 35203437 - 35203514
Alignment:
Q  207 tgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||||||||||| ||||||||||||||||||   |||||||||| ||| | | ||||||||||| ||||| |||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaa 35203514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 7193063 - 7193139
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||| ||||||    
T  7193063 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaag 7193139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 11741778 - 11741867
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||||||||||| | |||||||||||| ||||| ||||| |||||  ||||| |||||| |||||| ||||||||||||    
T  11741778 ttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgta--aaatagggtaaggctgcgtacaatacaccaaa 11741867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 32758224 - 32758333
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||| ||     
T  32758224 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgtgta 32758321  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  32758322 caatacaccaaa 32758333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 27629633 - 27629708
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||| |||||||||||||||||| | |||||||||| ||| | ||||||  |||||  |||||||||||    
T  27629633 gaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaaa 27629708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 47078025 - 47077947
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||||||||||||   ||||||||||    
T  47078025 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaa 47077947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 14099172 - 14099067
Alignment:
Q  178 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 277  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14099172 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14099073  T
Q  278 accaaa 283  Q
    ||||||    
T  14099072 accaaa 14099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 14409189 - 14409084
Alignment:
Q  178 gcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatac 277  Q
    |||| ||| |||| ||||||||  ||| ||||||||||| | ||| |||||||||||| | | | |||||||| ||| | | ||||||||||| ||||||    
T  14409189 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatac 14409090  T
Q  278 accaaa 283  Q
    ||||||    
T  14409089 accaaa 14409084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 35334986 - 35334880
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| ||||||||||||||||||   ||| |||||| ||| | |||||||||| ||     
T  35334986 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca--gtctcgtgtaaaaaacagggtaagactgtgta 35334889  T
Q  272 caatacacc 280  Q
    |||||||||    
T  35334888 caatacacc 35334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 2663057 - 2662996
Alignment:
Q  220 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||||||||| | |||||||||  ||||| |||||| |||||| ||||||||||||    
T  2663057 gttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtacaatacaccaaa 2662996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 42102066 - 42101915
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    |||||||  |||||||| ||||| |||| ||||||||  ||| ||| |||||||   |||||||||||||||||| | ||||  |||| ||| | |||||    
T  42102066 aaaggggaggccttggcacaacggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaa 42101967  T
Q  263 gactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtat 314  Q
     ||||||| || ||| | ||| ||| ||||  ||||| | ||||||||||||    
T  42101966 cactgcgtacagtactctaaagtggtgggaccctttcccggaccctgcgtat 42101915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 15108527 - 15108458
Alignment:
Q  213 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||| ||||||||||||||||||  ||||||||||| ||| |||||||| ||| || ||||||| ||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgtaa-aaacaaggtaaggctgtgtacaatacatcaaa 15108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 42496007 - 42495933
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgt 246  Q
    |||||||||||| | |||| ||||||||   || ||||||||||||| |||||||||||||||||| | ||||||    
T  42496007 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 3469354 - 3469273
Alignment:
Q  169 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||||||||||    ||||||||| ||||||   ||||||||||    
T  3469354 ggagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaa 3469273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 5180314 - 5180217
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| ||||||||||| | |||||| | ||||||||| | |||||||| | ||| | |||||||||| || ||| |||||||||    
T  5180314 taaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaa 5180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 38262330 - 38262257
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| ||||||||||||||||||   |||||||||| ||||| |||||   ||| | ||||||||||||    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaa 38262257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 42476851 - 42476945
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| || ||||||||||  ||||||| |||||||||   ||||||||||  || |||||||| |||||| ||||||||||||    
T  42476851 taaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaa--aacaaggtaaggctgcgtacaatacaccaaa 42476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 8149098 - 8149006
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtg-taagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||| || |||||| |||||||||||| |||| || ||||||| ||| ||||| ||||||  ||||| ||||||||||||    
T  8149098 ttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaaa 8149006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 14732994 - 14732883
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||| | |||||||||||||||||| | ||   ||||| ||| | |||||| ||||||     
T  14732994 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt- 14732896  T
Q  272 caatacaccaaaa 284  Q
    |||||||||||||    
T  14732895 caatacaccaaaa 14732883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 287
Target Start/End: Complemental strand, 7947553 - 7947429
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    ||||||||||||||||||||||| |||| ||| |||   ||| ||||||||||||  |||||| ||||||||||||| || ||||||| ||  | |||||    
T  7947553 aaagggggagccttggcgcaacggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaa 7947454  T
Q  263 gactgcgtccaatacaccaaaatgg 287  Q
    | |||||| ||||||||||||||||    
T  7947453 ggctgcgtacaatacaccaaaatgg 7947429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 315
Target Start/End: Complemental strand, 29356009 - 29355885
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aatggcgg 290  Q
    ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||| |||||| ||||||||||| ||||| ||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 29355910  T
Q  291 gagtctttctcagaccctgcgtatg 315  Q
    ||  | ||| | |||||||||||||    
T  29355909 gaccccttcccggaccctgcgtatg 29355885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 315
Target Start/End: Complemental strand, 12222088 - 12221945
Alignment:
Q  174 cttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 272  Q
    ||||||||||| | |||| ||||||||  ||| ||||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||| |||||| |    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  273 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  12221988 aatacaccaataatggtgggaccccttcccggaccctgcgtatg 12221945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 13905159 - 13905040
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||| ||||||||||||| |||| ||||||||  ||| ||||||||||||| | |||||||||| |||| || |||||||||| ||| | ||||||    
T  13905159 aagggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  264 actgcgtccaatacaccaaa 283  Q
     |||| | |||| |||||||    
T  13905059 gctgcatacaattcaccaaa 13905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 3815249 - 3815138
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| |||||| |||||| ||||||||||||||||||   | |||||||| ||||| |||| ||||||||     
T  3815249 ccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgta 3815150  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  3815149 caatacaccaaa 3815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 1346927 - 1347036
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| |  ||||||||  ||| | |||||| ||||||     
T  1346927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgta--aaacagggtaaggctgcgta 1347024  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  1347025 caatacaccaaa 1347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 1354927 - 1354818
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||||| ||||||     
T  1354927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgta 1354830  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  1354829 caatacaccaaa 1354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 9161101 - 9161229
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa-aat 285  Q
    |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||| ||| |  ||||| |||||| ||||||| ||| |||    
T  9161101 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaa-aaacagagtaaggctgcgtacaatacatcaataat 9161199  T
Q  286 ggcgggagtctttctcagaccctgcgtatg 315  Q
    || ||||  | ||||| |||||||||||||    
T  9161200 ggtgggaccccttctcggaccctgcgtatg 9161229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 2166550 - 2166506
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2166550 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2166506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 2178183 - 2178139
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  2178183 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 2178139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 14553511 - 14553586
Alignment:
Q  209 aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||||||||  |||||||||||||||| | |||||||||||| ||||| |||||| ||| ||  ||||||||||||    
T  14553511 aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaa 14553586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 12889379 - 12889465
Alignment:
Q  162 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt 248  Q
    |||||||||||||||||| ||||| |||| ||||||||  |||  |||||||||||  ||||||||| || ||||| | ||||||||    
T  12889379 taaagggggagccttggcacaacggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgt 12889465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 8409206 - 8409311
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| |||||||   ||| |||||||||||||  ||||||||||||||||  | |||||||||| ||| | |||||| ||||||     
T  8409206 ccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgta 8409305  T
Q  272 caatac 277  Q
    ||||||    
T  8409306 caatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 17432337 - 17432394
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||| | ||||||    
T  17432337 ctgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaag 17432394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 6024234 - 6024306
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||||||||  ||||| |||| |||||| | |||||||||| ||| | ||||||||||||| |||||||||||    
T  6024234 aaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaa 6024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 14975252 - 14975165
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataagg 259  Q
    |||||||||||| | |||| ||||||||  ||| ||| |||||||||  ||||||||||||||||| | |||||||||| ||| ||||    
T  14975252 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaacaagg 14975165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 20400650 - 20400737
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacac 279  Q
    ||||||||  ||| ||||||||||||  ||||||||  |||||||||  |||||||||| ||| | ||||||||||||| || |||||    
T  20400650 ttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgtacagtacac 20400737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 24751176 - 24751131
Alignment:
Q  242 cttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatgg 287  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaatacactaaaatgg 24751131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 33138838 - 33138907
Alignment:
Q  214 tcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||| |||||||||||||||||||| |||||| ||| ||| |  ||||| | |||| ||||||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaa 33138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 22967172 - 22967212
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  22967172 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 22967212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 23821221 - 23821181
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  23821221 aaggtcactagttcaagtcatggaaacaacttcttgtgtaa 23821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 32728313 - 32728217
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||   |||||||  |||||||||| |||| ||||| ||| | |||||||||| || ||||| ||||||    
T  32728313 taaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagactgtgtacaatataccaaa 32728217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 209107 - 208980
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||||||||||| || |||| ||||||||  ||| || |||||||||  ||||||||||||| |||||| |||||||||| ||| | ||||||    
T  209107 aagggggagccttggcgcagcggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaa-aaacagggtaag 209009  T
Q  264 actgcgtccaatacaccaaaatggcggga 292  Q
     |||| | |||||||||||||||| ||||    
T  209008 gctgcattcaatacaccaaaatggtggga 208980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 28516596 - 28516467
Alignment:
Q  182 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacacca 281  Q
    |||| |||| |||||||| |||||||||||||||||| ||||||||| |||||||| | |||||||||| ||| | | || | |||||| ||||||| ||    
T  28516596 aacggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatca 28516497  T
Q  282 aaatggcgggagtctttctcagaccctgcg 311  Q
    |||||| ||||  | ||| |||||||||||    
T  28516496 aaatggtgggacccattcccagaccctgcg 28516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 23974744 - 23974840
Alignment:
Q  173 ccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcg 269  Q
    ||||||||||||| |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||| | |||||| |||||    
T  23974744 ccttggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 315
Target Start/End: Original strand, 38879544 - 38879688
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| ||||||     
T  38879544 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 38879643  T
Q  272 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  38879644 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 38879688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 24448853 - 24448964
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | | |||||||| ||||| |||||| ||||||     
T  24448853 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgta 24448952  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  24448953 caatacaccaaa 24448964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 39301078 - 39301163
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 249  Q
    |||||||||||||||||||||| |||| ||||||||  ||  ||||||||||||| ||||||||| ||| |||||| |||||||||    
T  39301078 aagggggagccttggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgta 39301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 35710276 - 35710385
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||  ||||||||||||| |||||||||||||||||| | |||||||||  ||||| |||||| ||||||     
T  35710276 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctgcgtt 35710373  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  35710374 caatacaccaaa 35710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 41014282 - 41014392
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  41014282 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 41014380  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  41014381 caatacaccaaa 41014392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 4619278 - 4619168
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| | | |||||||||| ||| | |||||| ||||||     
T  4619278 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgta 4619179  T
Q  272 caatacaccaa 282  Q
    |||||||||||    
T  4619178 caatacaccaa 4619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 42924972 - 42924894
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||| ||| | ||||||  ||||| |||||||||||||    
T  42924972 ctgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaa 42924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 43334165 - 43334278
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgt 270  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| || ||| | |||||| ||||||    
T  43334165 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgt 43334264  T
Q  271 ccaatacaccaaaa 284  Q
     |||||||||||||    
T  43334265 acaatacaccaaaa 43334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 27328730 - 27328825
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||||||||||||  ||||||||||||||||||   |||||||||| ||| | |||||| |||||| |||||||||||    
T  27328730 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 27328825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 19143117 - 19143004
Alignment:
Q  169 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgc 268  Q
    ||||||||||||||| | |||| ||||||||  ||| || ||| | |||  |||||||||||||||||||| |||||||||| ||| | |||||| ||||    
T  19143117 ggagccttggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaa-aaacagggtaaggctgc 19143019  T
Q  269 gtccaatacaccaaa 283  Q
    || || |||||||||    
T  19143018 gtacagtacaccaaa 19143004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 22187282 - 22187360
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||||||  ||| |||||||||||||| | |||||||||| ||| | | ||||||||||| |||||||||||||    
T  22187282 ctgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaa 22187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 32703421 - 32703496
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| | |||||| |||||| ||||||||||||    
T  32703421 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagggtaaggctgcgtacaatacaccaaa 32703496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 8170154 - 8170045
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| | ||||||||||| |||||||||||||||||| | | |||||||  ||| | |||||| ||||||     
T  8170154 ccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgta--aaacagggtaaggctgcgta 8170057  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  8170056 caatacaccaaa 8170045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 10634327 - 10634251
Alignment:
Q  163 aaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaac 239  Q
    ||||| ||||||||||||||||| | || ||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  10634327 aaaggaggagccttggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaac 10634251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 37024711 - 37024648
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  37024711 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 37024648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 39079946 - 39079875
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaa 235  Q
    ||||| |||||||||||||||| |||| ||||||||  ||| | ||||||||||| ||||||||| ||||||    
T  39079946 aagggtgagccttggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 43574609 - 43574680
Alignment:
Q  212 ggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||||||||||||||||||||||||||  |||||||||  ||| | |||||| |||||| ||||| ||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaa 43574680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 1565394 - 1565472
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||||||| | |||| ||||||||  ||| |||||||||| || |||||||||||||||||||| ||||| ||||    
T  1565394 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaa 1565472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 29334415 - 29334501
Alignment:
Q  229 ctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||| | |||||||||| ||| |||||||| |||||| |||||||||| ||||| ||||  | ||| | |||||||||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatg 29334501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 1405188 - 1405261
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| |||||||||||||||||||| |||| | ||| |||||  |||||  ||||| ||||||||||||    
T  1405188 aaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaa 1405261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 41425952 - 41426021
Alignment:
Q  213 gtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||||| |||||||| ||||||||||||| |||||||| ||| | |||||| |||| | |||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacaccaa 41426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 12006500 - 12006358
Alignment:
Q  175 ttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtg-ttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtcc 272  Q
    |||||||||| ||| || ||||||||  ||| ||||||||||||| | |||||||| |||||||||| |||| ||||| ||||| |||||| || | | |    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatac 12006402  T
Q  273 aatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    |||||||||| ||||| ||||  | ||| |||||||||| ||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatg 12006358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13801893 - 13801831
Alignment:
Q  220 gttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||||||||| || | |||||||||| ||| | |||||| |||||| |||||||||||    
T  13801893 gttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 13801831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 20135623 - 20135677
Alignment:
Q  228 cctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||||||||| | |||||||||| ||| |||||||| |||||| |||||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 20135677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 1850624 - 1850681
Alignment:
Q  193 tgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||||  ||| ||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaa 1850681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 315
Target Start/End: Original strand, 2838732 - 2838883
Alignment:
Q  164 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggta 261  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||| |||||||||| | |||||||   |||||| | |||||||||| ||| | ||||    
T  2838732 aaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaa-aaacagggta 2838830  T
Q  262 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    || |||||| ||||||||| |||||| ||||  | ||||| |||||||||||||    
T  2838831 aggctgcgtacaatacacc-aaatggtgggatcccttctcggaccctgcgtatg 2838883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 22025540 - 22025597
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    ||||||||||| | |||||||||||||||||| | |||||||||| ||| | ||||||    
T  22025540 ctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 22025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 24903875 - 24903758
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    ||||||||| ||| | ||||| |||||||||||||  ||| |||||| |||| | |  ||||||||| ||||| | | |||||||| ||||| |||||||    
T  24903875 agggggagctttgacacaacggtaaatttgttgtcacgtgactgaaaagtcatgggcacaagtcctgaaaacagccttttgtgtaaaaaatagggtaaga 24903776  T
Q  265 ctgcgtccaatacaccaa 282  Q
     || || |||| ||||||    
T  24903775 ttgtgtacaatccaccaa 24903758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 34074700 - 34074623
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||  ||||||||||| |||||| | |||||||||| ||| |  |||||  ||||| ||||||||||||    
T  34074700 ctgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaaa 34074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 32781468 - 32781349
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||| ||||||||||| | |||| ||||||    || |||||||||||||| |||||||||  ||||||||| |||||||||| ||| | ||||||    
T  32781468 aagggggaaccttggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaag 32781369  T
Q  264 actgcgtccaatacaccaaa 283  Q
    ||||||| ||||||||||||    
T  32781368 actgcgtacaatacaccaaa 32781349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 284
Target Start/End: Original strand, 10543652 - 10543773
Alignment:
Q  164 aagggggagccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaa 262  Q
    |||||| | |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||  | |||||||||| ||| | |||||    
T  10543652 aaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaa 10543751  T
Q  263 gactgcgtccaatacaccaaaa 284  Q
    | |||||| |||||||||||||    
T  10543752 ggctgcgtacaatacaccaaaa 10543773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 29420071 - 29419941
Alignment:
Q  162 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaata----a 257  Q
    ||||||||||| |||||  ||||| |||| ||||||||   || ||||||||||||| |||||||||||||||||||| |||||||||| ||| |    |    
T  29420071 taaagggggagtcttggtccaacggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggta 29419972  T
Q  258 ggtaagactgcgtccaatacaccaaaatggc 288  Q
     ||||| |||||| |||||||||||||||||    
T  29419971 agtaaggctgcgtacaatacaccaaaatggc 29419941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 44521552 - 44521425
Alignment:
Q  165 agggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaaga 264  Q
    |||||||||||||||| |||| |||| ||||| ||  ||| ||||||||||||| |||||| || |||||||||  |||||||||| ||| ||||||||     
T  44521552 agggggagccttggcggaacggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaagg 44521453  T
Q  265 ctgcgtccaatacaccaaaatggcgggag 293  Q
    |||| |  |||||||| ||||||||||||    
T  44521452 ctgcatataatacacc-aaatggcgggag 44521425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 5450245 - 5450360
Alignment:
Q  169 ggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactg 267  Q
    |||||||||| ||| || |||| ||||||||  ||| ||||||||||||| |||||| ||||||||||||| |||||||| || ||| | |||||| |||    
T  5450245 ggagccttggtgcagcgttaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctg 5450344  T
Q  268 cgtccaatacaccaaa 283  Q
    ||| ||||||||||||    
T  5450345 cgtacaatacaccaaa 5450360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 12024090 - 12023980
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||||||     
T  12024090 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgcgta 12023992  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  12023991 caatacaccaaa 12023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 24200782 - 24200685
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| |||||| |||||| |||||||||||||||||| | |||||||||| ||| | |||||| |||||| |||||||||||||    
T  24200782 taaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa 24200685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 4516529 - 4516413
Alignment:
Q  166 gggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagac 265  Q
    |||||||||||||||||||| |||| ||||||||  ||| |||||||||||| | ||||||| || |||||| | |||||||||| ||| | || ||  |    
T  4516529 gggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgc 4516430  T
Q  266 tgcgtccaatacaccaa 282  Q
    ||||| |||||||||||    
T  4516429 tgcgtacaatacaccaa 4516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 315
Target Start/End: Original strand, 14530281 - 14530425
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | |||||| || |||     
T  14530281 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgta 14530380  T
Q  272 caatacaccaa-aatggcgggagtctttctcagaccctgcgtatg 315  Q
    ||||||||||| ||||| ||||  | ||| | |||||||||||||    
T  14530381 caatacaccaataatggtgggaccccttcccggaccctgcgtatg 14530425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 8455488 - 8455377
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||||||||||||||| | |||||||||| | | | |||||| ||||||     
T  8455488 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgta 8455389  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  8455388 caatacaccaaa 8455377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 11514399 - 11514510
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||||||||| |||||| ||||||||||| | |||||||||| ||| || ||||| ||||||     
T  11514399 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgta 11514498  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  11514499 caatacaccaaa 11514510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 99440 - 99326
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    ||||||||||||||||||  |||| ||||||||  ||| ||||||||||||| ||||||||||| |||||| | |||  ||||| ||| | || ||| ||    
T  99440 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctct--tgtaaaaaacatggcaaggct 99343  T
Q  267 gcgtccaatacaccaaa 283  Q
    |||| ||||||||||||    
T  99342 gcgtacaatacaccaaa 99326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 17667980 - 17668076
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||||||||||| ||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17667980 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17668076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 315
Target Start/End: Complemental strand, 15296589 - 15296436
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtg--ttcaagtcctggaaacaacttcttgtgtaagaaataaggta 261  Q
    ||||||||||||||||| |||| |||| |||||||    |||||||||| ||| |||  ||||||||| ||||||| | | |||||||| | | | ||||    
T  15296589 aagggggagccttggcggaacggtaaagttgttgttacatggctgaaagatcatgtgggttcaagtcccggaaacagcctgttgtgtaaaatacagggta 15296490  T
Q  262 agactgcgtccaatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    || |||||| ||||| |||||||| | ||||  | ||||| |||||||||||||    
T  15296489 aggctgcgtacaatataccaaaatagtgggatcccttctcggaccctgcgtatg 15296436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 17380416 - 17380331
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgta 249  Q
    |||||||||||||||||||| |   || ||||||||  ||| | ||||||||||| ||||||||| |||||||||| |||||||||    
T  17380416 aagggggagccttggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 17380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 17623565 - 17623638
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| ||||||||||| |||||||| |||||||||| ||  | |||||| |||||| ||||||||||||    
T  17623565 aaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 315
Target Start/End: Original strand, 17896237 - 17896365
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaaat 285  Q
    |||| ||||||||  ||| | |||||||||||  |||||||||| |||||||| |||||||| || ||||| |||||| |||||| ||||| ||| ||||    
T  17896237 taaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgtacaatatacc-aaat 17896335  T
Q  286 ggcgggagtctttctcagaccctgcgtatg 315  Q
    || ||||  | ||||| |||||||||||||    
T  17896336 ggtgggaccccttctcggaccctgcgtatg 17896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 23397744 - 23397838
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||||||||| | |||||||||  ||||| |||||| || ||| ||||||||||||    
T  23397744 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgta--aaatagggtaaggctacgtacaatacaccaaa 23397838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 19614989 - 19615065
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    ||||||||||||| ||||||||||| |||||| | |||||| ||| ||| | ||||||||||||| ||||| |||||    
T  19614989 ctgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaa 19615065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 10546159 - 10546237
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgt-aagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||| |||||||||||||||||| | |||||| | || ||| | |||||| |||||| ||||||||||||    
T  10546159 ctgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaa 10546237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 44604830 - 44604895
Alignment:
Q  185 gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||||| ||||||||  ||| ||| ||||||||  |||||||||||||||||||| ||||||||||    
T  44604830 gctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaa 44604895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 21779411 - 21779322
Alignment:
Q  192 ttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||  ||| ||||||||||||| |||||||||||||| ||| | |||||||||  ||| | ||||||  ||||| ||||||||||||    
T  21779411 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgta--aaacagggtaaggttgcgtacaatacaccaaa 21779322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 33795258 - 33795346
Alignment:
Q  182 aacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 270  Q
    |||| |||| ||||||||  |||  |||||||||||| |||||||||| ||||||||| ||||| |||| ||| | |||||| ||||||    
T  33795258 aacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgt 33795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 5841006 - 5841097
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaataca 278  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||||| |||||| | | |||||||| ||||| ||||||  ||||| |||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgtacaataca 5841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 12315787 - 12315713
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||| ||||||||| |||||||| |||||| | ||| ||| | |||||||||| || ||||||||||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaaa 12315713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 19977850 - 19977775
Alignment:
Q  208 gaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||| |||||||| ||||||||| | |||| ||||| ||||| | ||||  ||||| ||||||||||||    
T  19977850 gaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgtacaatacaccaaa 19977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 23145874 - 23145760
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23145874 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23145776  T
Q  267 gcgtccaatacaccaa 282  Q
    |||| |||||||||||    
T  23145775 gcgtacaatacaccaa 23145760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 23557664 - 23557550
Alignment:
Q  167 ggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagact 266  Q
    |||||||||||||| | || |||| |||||||   ||| ||||||||||||| ||||||||| || |||||   |||||||||| ||| |  ||||| ||    
T  23557664 ggggagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggct 23557566  T
Q  267 gcgtccaatacaccaa 282  Q
    |||| |||||||||||    
T  23557565 gcgtacaatacaccaa 23557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 40417028 - 40416933
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaa 282  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| |||||||||| |||||| ||| ||| | || ||| ||| || |||||||||||    
T  40417028 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaa 40416933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 13245220 - 13245182
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgt 248  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  13245220 aaggtcacgagttcaagtcctggaaacaacctcttgtgt 13245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 283
Target Start/End: Complemental strand, 31821518 - 31821404
Alignment:
Q  164 aagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaag 263  Q
    |||||||||||||||||||||| || | ||||| |   ||| ||||||||||||| ||||||||| | |||||| |  | ||||||| ||||| ||||||    
T  31821518 aagggggagccttggcgcaacggtatagttgttat---gtgactgaaaggtcacgagttcaagtcgtagaaacagc--cgtgtgtaaaaaatagggtaag 31821424  T
Q  264 actgcgtccaatacaccaaa 283  Q
      || || ||||||||||||    
T  31821423 gttgtgtacaatacaccaaa 31821404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 35017776 - 35017846
Alignment:
Q  168 gggagccttggcgcaacgctaaatttgttgtccggtggc-tgaaaggtcacgtgttcaagtcctggaaaca 237  Q
    |||||||||||||||||| |||| ||||||||  ||| | |||||||||||| ||| |||||||| |||||    
T  35017776 gggagccttggcgcaacggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaaca 35017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 7214512 - 7214609
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    |||| ||||||||  ||| ||||||||||| | ||||||||| ||||||||   |||||||||| | | | |||||| |||||| |||||||| ||||    
T  7214512 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaa 7214609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 9671143 - 9671253
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctg-aaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgt 270  Q
    |||||||||||| | |||| ||||||||  ||| ||| ||| |||||| |||||| ||||||||||| | |||||||||  ||| | |||||| ||||||    
T  9671143 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgta--aaacagggtaaggctgcgt 9671240  T
Q  271 ccaatacaccaaa 283  Q
     ||||||||||||    
T  9671241 acaatacaccaaa 9671253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 14444730 - 14444802
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| |||||||||||||||||| | |||||||||| ||| | |||||| ||| || | ||||||||||    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaa-aaacagggtaaggctgtgtacgatacaccaaa 14444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 25249894 - 25249799
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| ||||||||| ||||||||   |||||||||  ||| | |||||| |||||| ||||||||||||    
T  25249894 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtac-aaacagggtaaggctgcgtacaatacaccaaa 25249799  T

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Target: scaffold0049 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 58974 - 59052
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaaa 284  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||| ||| | ||||||||||||| |||||||||||||    
T  58974 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaa 59052  T

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Target: scaffold0258 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 13195 - 13054
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | ||||| |||| ||| |||||||| ||||||     
T  13195 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaa-aaacaaggtaaggctgcgta 13097  T
Q  272 caatacaccaaaatggcgggagtctttctcagaccctgcgtatg 315  Q
    |||||||||  ||||| ||||  | ||| |||||||||||||||    
T  13096 caatacacc-gaatggtgggaccccttcccagaccctgcgtatg 13054  T

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Target: scaffold0187 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 10205 - 10111
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  10205 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 10111  T

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Target: scaffold0187; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 20533 - 20439
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||  ||| |  |||||||||||| ||||||||||||    
T  20533 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacagagtaagactgcgtacaatacaccaaa 20439  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 46832 - 46905
Alignment:
Q  210 aaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||| ||||||  ||||| ||||||||||||    
T  46832 aaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaaa 46905  T

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Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 47065 - 46995
Alignment:
Q  162 taaagggggagccttggcgcaacgctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctgg 232  Q
    ||||||| ||||||||||||||   |||| |||||||| |||| ||||||||||||| |||||||||||||    
T  47065 taaagggagagccttggcgcaatagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcctgg 46995  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 10788 - 10884
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    |||| ||||||||  ||| ||| ||||||||| |||||||  ||| ||||||| |||||||||| ||| | |||| | |||||||||||||||||||    
T  10788 taaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaaa 10884  T

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Target: scaffold0254 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 4154 - 4198
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  4154 ctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaa 4198  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 30542 - 30651
Alignment:
Q  173 ccttggcgcaac-gctaaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtc 271  Q
    |||||||||||| | |||| ||||||||  ||| ||||||||||||  |||||||||||||||||| | |||||||||  ||| | |||| | ||||||     
T  30542 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgta--aaacagggtagggctgcgta 30639  T
Q  272 caatacaccaaa 283  Q
    ||||||||||||    
T  30640 caatacaccaaa 30651  T

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Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 11128 - 11203
Alignment:
Q  206 ctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaagaaataaggtaagactgcgtccaatacaccaaa 283  Q
    ||||||||||||| |||||||||||||||||| | |||||||||  ||| || ||||| |||| | ||||||||||||    
T  11128 ctgaaaggtcacgggttcaagtcctggaaacagcctcttgtgta--aaacaaagtaaggctgcttacaatacaccaaa 11203  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 1742 - 1679
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||| ||||||||  ||| ||||||||||| | |||||||||||| ||||||| ||||||||||    
T  1742 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaa 1679  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 8869 - 8932
Alignment:
Q  187 taaatttgttgtccggtggctgaaaggtcacgtgttcaagtcctggaaacaacttcttgtgtaa 250  Q
    |||| ||||||||  ||| ||| ||||||||  |||||| ||||||||||||||||||||||||    
T  8869 taaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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