View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10164_low_6 (Length: 364)

Name: NF10164_low_6
Description: NF10164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10164_low_6
NF10164_low_6
[»] chr2 (59 HSPs)
chr2 (19-114)||(2294737-2294832)
chr2 (111-209)||(40613908-40614006)
chr2 (115-209)||(38273148-38273242)
chr2 (115-207)||(36168836-36168928)
chr2 (115-209)||(7465741-7465835)
chr2 (115-209)||(17473020-17473114)
chr2 (19-80)||(2304466-2304527)
chr2 (120-209)||(28863460-28863549)
chr2 (115-209)||(9058480-9058574)
chr2 (115-209)||(33436106-33436200)
chr2 (115-209)||(33436211-33436305)
chr2 (115-209)||(42257193-42257287)
chr2 (113-209)||(13438341-13438437)
chr2 (115-209)||(10249388-10249482)
chr2 (115-209)||(32505654-32505748)
chr2 (114-209)||(40701477-40701572)
chr2 (115-209)||(2533124-2533217)
chr2 (115-209)||(5574494-5574588)
chr2 (115-209)||(20700815-20700909)
chr2 (115-209)||(30915463-30915557)
chr2 (19-80)||(2322156-2322217)
chr2 (120-209)||(19930826-19930915)
chr2 (113-209)||(27864702-27864798)
chr2 (113-209)||(28381661-28381757)
chr2 (113-205)||(43490119-43490211)
chr2 (239-294)||(10249303-10249358)
chr2 (115-209)||(26891510-26891604)
chr2 (120-209)||(41575142-41575232)
chr2 (115-205)||(45097745-45097835)
chr2 (114-197)||(17820022-17820105)
chr2 (240-294)||(32505569-32505623)
chr2 (115-197)||(38882832-38882913)
chr2 (115-188)||(15428767-15428840)
chr2 (114-209)||(4060684-4060779)
chr2 (239-294)||(5574421-5574476)
chr2 (239-294)||(7465656-7465711)
chr2 (239-294)||(13438467-13438522)
chr2 (239-294)||(17473144-17473199)
chr2 (239-294)||(28863579-28863634)
chr2 (135-205)||(2997497-2997567)
chr2 (243-285)||(20700943-20700985)
chr2 (239-285)||(33436030-33436076)
chr2 (115-205)||(13365351-13365443)
chr2 (240-285)||(40613832-40613877)
chr2 (115-183)||(17823784-17823852)
chr2 (239-294)||(19930741-19930796)
chr2 (239-282)||(27864815-27864858)
chr2 (239-294)||(38882732-38882787)
chr2 (239-281)||(36168960-36169002)
chr2 (115-205)||(38732354-38732444)
chr2 (241-281)||(2533249-2533289)
chr2 (121-209)||(3439985-3440073)
chr2 (239-279)||(9058604-9058644)
chr2 (246-294)||(28381576-28381624)
chr2 (239-294)||(40701602-40701657)
chr2 (142-197)||(42849794-42849848)
chr2 (159-209)||(3737987-3738037)
chr2 (239-267)||(4060809-4060837)
chr2 (142-186)||(16096870-16096913)
[»] chr7 (56 HSPs)
chr7 (115-209)||(46374808-46374902)
chr7 (111-209)||(19329838-19329936)
chr7 (116-209)||(35522877-35522970)
chr7 (113-209)||(21234399-21234495)
chr7 (115-209)||(3434562-3434656)
chr7 (115-209)||(7389389-7389483)
chr7 (114-209)||(38267039-38267134)
chr7 (115-209)||(4999520-4999614)
chr7 (115-209)||(8080389-8080483)
chr7 (115-209)||(36361919-36362013)
chr7 (115-209)||(38837217-38837311)
chr7 (113-209)||(35137531-35137627)
chr7 (115-207)||(46033809-46033901)
chr7 (115-206)||(26296644-26296735)
chr7 (115-209)||(19436193-19436287)
chr7 (113-171)||(31735882-31735940)
chr7 (115-209)||(36208173-36208267)
chr7 (115-209)||(36362026-36362120)
chr7 (120-209)||(3784000-3784089)
chr7 (120-209)||(32951499-32951588)
chr7 (115-205)||(22343361-22343451)
chr7 (114-204)||(32564437-32564527)
chr7 (115-209)||(35468861-35468955)
chr7 (115-205)||(41915741-41915831)
chr7 (239-294)||(4999435-4999490)
chr7 (239-294)||(19329966-19330021)
chr7 (115-209)||(18207180-18207273)
chr7 (239-285)||(19436117-19436163)
chr7 (115-205)||(38044197-38044287)
chr7 (115-209)||(40957707-40957801)
chr7 (120-209)||(3694372-3694461)
chr7 (113-205)||(8238210-8238303)
chr7 (114-195)||(39255944-39256024)
chr7 (239-294)||(3434676-3434731)
chr7 (243-294)||(8080304-8080355)
chr7 (239-294)||(32951414-32951469)
chr7 (239-294)||(36362138-36362193)
chr7 (115-174)||(40846154-40846213)
chr7 (239-294)||(40957831-40957886)
chr7 (239-285)||(46033731-46033777)
chr7 (114-191)||(41423681-41423758)
chr7 (239-294)||(36361846-36361901)
chr7 (239-294)||(38837341-38837396)
chr7 (239-285)||(16374754-16374800)
chr7 (239-285)||(21234525-21234571)
chr7 (239-293)||(31736001-31736055)
chr7 (243-281)||(41423810-41423848)
chr7 (239-285)||(46374754-46374800)
chr7 (142-197)||(32029752-32029806)
chr7 (115-181)||(10343597-10343663)
chr7 (251-293)||(18207315-18207357)
chr7 (239-285)||(35137657-35137703)
chr7 (239-281)||(35523000-35523042)
chr7 (115-164)||(11044188-11044237)
chr7 (149-194)||(27744330-27744375)
chr7 (252-285)||(39255854-39255887)
[»] chr1 (51 HSPs)
chr1 (115-209)||(32813247-32813341)
chr1 (113-209)||(26440732-26440828)
chr1 (115-209)||(2581915-2582009)
chr1 (113-209)||(27564741-27564837)
chr1 (114-209)||(9474882-9474977)
chr1 (115-209)||(38632327-38632421)
chr1 (115-209)||(51898689-51898783)
chr1 (114-209)||(48716288-48716383)
chr1 (115-209)||(3000319-3000413)
chr1 (115-209)||(8346394-8346488)
chr1 (120-209)||(44548382-44548471)
chr1 (113-209)||(37649196-37649292)
chr1 (113-209)||(47452326-47452422)
chr1 (114-205)||(50591010-50591101)
chr1 (115-209)||(23597097-23597191)
chr1 (115-209)||(38595154-38595248)
chr1 (115-194)||(37926459-37926538)
chr1 (114-197)||(41608511-41608594)
chr1 (239-294)||(41758929-41758984)
chr1 (115-209)||(41758805-41758899)
chr1 (115-209)||(50630458-50630552)
chr1 (113-209)||(6260868-6260964)
chr1 (239-294)||(27564656-27564711)
chr1 (239-294)||(37649322-37649377)
chr1 (239-294)||(48716203-48716258)
chr1 (115-209)||(43132-43226)
chr1 (115-209)||(45044566-45044660)
chr1 (115-209)||(49811533-49811627)
chr1 (239-283)||(38632253-38632297)
chr1 (239-294)||(9474797-9474852)
chr1 (115-205)||(5959010-5959100)
chr1 (239-285)||(50630582-50630628)
chr1 (120-208)||(11152385-11152472)
chr1 (145-209)||(13414791-13414855)
chr1 (239-294)||(43256-43311)
chr1 (115-197)||(7740733-7740815)
chr1 (239-285)||(32813371-32813417)
chr1 (239-285)||(49811457-49811503)
chr1 (120-205)||(26274437-26274522)
chr1 (239-284)||(45044491-45044536)
chr1 (113-205)||(47748441-47748532)
chr1 (239-294)||(2582039-2582094)
chr1 (142-197)||(7447936-7447990)
chr1 (239-294)||(26274553-26274608)
chr1 (243-294)||(47452241-47452292)
chr1 (243-285)||(11152308-11152350)
chr1 (239-285)||(37926368-37926414)
chr1 (116-209)||(44453980-44454073)
chr1 (142-186)||(4401450-4401493)
chr1 (239-275)||(8346327-8346363)
chr1 (142-186)||(50448195-50448238)
[»] chr3 (53 HSPs)
chr3 (113-209)||(26141538-26141634)
chr3 (115-209)||(51419366-51419460)
chr3 (113-209)||(53982009-53982105)
chr3 (114-209)||(20764921-20765016)
chr3 (115-209)||(11347928-11348022)
chr3 (115-209)||(47531865-47531959)
chr3 (114-209)||(33644199-33644294)
chr3 (115-209)||(24699960-24700054)
chr3 (115-209)||(41189770-41189864)
chr3 (119-209)||(52629304-52629394)
chr3 (115-209)||(17470405-17470499)
chr3 (115-209)||(49607414-49607508)
chr3 (115-194)||(33118872-33118951)
chr3 (115-209)||(8076393-8076487)
chr3 (115-209)||(27714897-27714991)
chr3 (115-209)||(35536626-35536720)
chr3 (115-209)||(54868901-54868995)
chr3 (120-209)||(31456694-31456783)
chr3 (115-183)||(11095385-11095453)
chr3 (118-209)||(26754698-26754789)
chr3 (115-209)||(8956762-8956856)
chr3 (239-294)||(11095288-11095343)
chr3 (115-209)||(11907371-11907465)
chr3 (115-209)||(14623845-14623939)
chr3 (120-205)||(48587101-48587186)
chr3 (239-294)||(33644324-33644379)
chr3 (114-205)||(45058563-45058653)
chr3 (239-294)||(53982135-53982190)
chr3 (239-293)||(11347844-11347898)
chr3 (239-285)||(20764845-20764891)
chr3 (120-209)||(13898061-13898150)
chr3 (120-209)||(30801739-30801828)
chr3 (245-285)||(30801663-30801703)
chr3 (115-183)||(36707456-36707524)
chr3 (239-294)||(31456813-31456868)
chr3 (115-174)||(36331419-36331478)
chr3 (239-294)||(48587022-48587077)
chr3 (239-294)||(49607538-49607593)
chr3 (243-285)||(35536754-35536796)
chr3 (115-197)||(41080709-41080790)
chr3 (115-209)||(48375712-48375806)
chr3 (243-284)||(33118781-33118822)
chr3 (240-285)||(35965712-35965757)
chr3 (143-204)||(40480853-40480913)
chr3 (137-205)||(36331339-36331407)
chr3 (119-186)||(25395362-25395429)
chr3 (239-294)||(52629424-52629479)
chr3 (142-197)||(53581793-53581847)
chr3 (239-294)||(54868816-54868871)
chr3 (243-285)||(8076521-8076563)
chr3 (239-285)||(26141460-26141506)
chr3 (245-294)||(27714824-27714873)
chr3 (142-198)||(52629938-52629993)
[»] chr5 (41 HSPs)
chr5 (113-209)||(28177773-28177869)
chr5 (114-209)||(26720515-26720610)
chr5 (114-209)||(26990264-26990359)
chr5 (113-209)||(40145405-40145501)
chr5 (115-209)||(2740274-2740368)
chr5 (120-209)||(18520890-18520979)
chr5 (115-209)||(6679698-6679792)
chr5 (115-209)||(15409616-15409710)
chr5 (113-209)||(33149644-33149740)
chr5 (115-205)||(2252178-2252268)
chr5 (115-209)||(36732948-36733042)
chr5 (113-209)||(14831812-14831908)
chr5 (113-209)||(42414308-42414404)
chr5 (122-209)||(13811659-13811746)
chr5 (115-205)||(3921275-3921365)
chr5 (115-209)||(20073522-20073616)
chr5 (114-209)||(35785198-35785293)
chr5 (115-209)||(31008988-31009082)
chr5 (115-209)||(35943898-35943992)
chr5 (239-294)||(33149559-33149614)
chr5 (120-175)||(36875643-36875698)
chr5 (239-294)||(2740398-2740453)
chr5 (239-294)||(14831938-14831993)
chr5 (239-294)||(18520805-18520860)
chr5 (243-285)||(31009116-31009158)
chr5 (239-285)||(36732872-36732918)
chr5 (119-174)||(10356638-10356694)
chr5 (239-294)||(31132458-31132513)
chr5 (239-294)||(35785323-35785378)
chr5 (239-294)||(40145531-40145586)
chr5 (114-196)||(6260020-6260102)
chr5 (239-281)||(15409544-15409586)
chr5 (115-209)||(33825330-33825424)
chr5 (115-209)||(38296203-38296297)
chr5 (251-294)||(16115253-16115296)
chr5 (115-174)||(39688938-39688997)
chr5 (123-206)||(41470425-41470508)
chr5 (239-285)||(13811776-13811822)
chr5 (239-285)||(26720640-26720686)
chr5 (239-285)||(26990389-26990435)
chr5 (113-154)||(21370012-21370053)
[»] chr6 (33 HSPs)
chr6 (115-209)||(31976248-31976342)
chr6 (113-209)||(32869676-32869772)
chr6 (120-209)||(22880664-22880753)
chr6 (113-209)||(17598552-17598648)
chr6 (115-209)||(31110767-31110859)
chr6 (114-205)||(15508034-15508125)
chr6 (115-205)||(15990052-15990142)
chr6 (115-209)||(29857827-29857921)
chr6 (115-205)||(30341370-30341460)
chr6 (114-205)||(4231547-4231638)
chr6 (119-194)||(9379733-9379808)
chr6 (239-294)||(11427742-11427797)
chr6 (115-209)||(11427616-11427712)
chr6 (115-209)||(6209471-6209565)
chr6 (111-180)||(31953065-31953134)
chr6 (239-294)||(29857951-29858006)
chr6 (114-197)||(31109418-31109501)
chr6 (239-294)||(32869802-32869857)
chr6 (120-182)||(28536519-28536581)
chr6 (239-285)||(31976372-31976418)
chr6 (115-204)||(15832577-15832666)
chr6 (239-284)||(15832701-15832746)
chr6 (239-294)||(17598678-17598733)
chr6 (122-181)||(946383-946442)
chr6 (115-186)||(12732482-12732553)
chr6 (239-294)||(22880579-22880634)
chr6 (146-209)||(23128133-23128196)
chr6 (251-285)||(22422009-22422043)
chr6 (243-285)||(31952960-31953002)
chr6 (142-195)||(26669944-26669996)
chr6 (142-186)||(7367671-7367714)
chr6 (243-275)||(28536428-28536460)
chr6 (249-285)||(30870148-30870184)
[»] chr4 (46 HSPs)
chr4 (115-209)||(50052434-50052528)
chr4 (114-209)||(11511468-11511563)
chr4 (114-209)||(31910191-31910286)
chr4 (115-209)||(48183055-48183149)
chr4 (114-208)||(50526178-50526272)
chr4 (115-201)||(55475191-55475277)
chr4 (114-209)||(6034043-6034138)
chr4 (115-209)||(480453-480547)
chr4 (115-209)||(24995113-24995207)
chr4 (115-209)||(29234251-29234345)
chr4 (115-209)||(41236347-41236441)
chr4 (115-209)||(42044373-42044467)
chr4 (113-182)||(40574777-40574846)
chr4 (114-209)||(54473539-54473634)
chr4 (113-209)||(3481652-3481748)
chr4 (115-205)||(19670726-19670816)
chr4 (115-209)||(29239886-29239980)
chr4 (115-205)||(32766958-32767048)
chr4 (240-294)||(48182970-48183024)
chr4 (115-188)||(29547986-29548059)
chr4 (239-294)||(6034168-6034223)
chr4 (239-294)||(41236471-41236526)
chr4 (115-197)||(8343181-8343263)
chr4 (115-209)||(23608235-23608329)
chr4 (115-205)||(47986208-47986298)
chr4 (115-209)||(48647732-48647826)
chr4 (246-293)||(40574910-40574957)
chr4 (135-205)||(17983753-17983823)
chr4 (240-294)||(24995028-24995082)
chr4 (115-209)||(29977885-29977979)
chr4 (115-185)||(47104544-47104614)
chr4 (115-197)||(55079732-55079814)
chr4 (153-209)||(41823920-41823976)
chr4 (119-207)||(53352574-53352661)
chr4 (239-294)||(42044288-42044343)
chr4 (119-185)||(18769113-18769179)
chr4 (243-285)||(29240014-29240056)
chr4 (239-285)||(41824006-41824052)
chr4 (115-185)||(50813922-50813992)
chr4 (250-294)||(53352495-53352539)
chr4 (141-204)||(33703245-33703307)
chr4 (115-197)||(28480286-28480368)
chr4 (115-197)||(28481161-28481243)
chr4 (115-197)||(28482036-28482118)
chr4 (239-281)||(54473467-54473509)
chr4 (113-186)||(18924524-18924597)
[»] chr8 (52 HSPs)
chr8 (113-209)||(43414587-43414683)
chr8 (114-209)||(15048188-15048282)
chr8 (115-209)||(4854869-4854963)
chr8 (113-209)||(504127-504223)
chr8 (113-209)||(15197331-15197427)
chr8 (115-209)||(12831047-12831141)
chr8 (115-209)||(37038479-37038573)
chr8 (117-209)||(10621093-10621185)
chr8 (113-209)||(34012302-34012398)
chr8 (122-209)||(14547929-14548016)
chr8 (115-209)||(10284637-10284731)
chr8 (120-209)||(5957835-5957924)
chr8 (113-209)||(23122603-23122699)
chr8 (115-207)||(44507095-44507187)
chr8 (114-209)||(40423949-40424044)
chr8 (115-205)||(16383377-16383467)
chr8 (113-185)||(20074964-20075036)
chr8 (239-294)||(504042-504097)
chr8 (239-294)||(23122518-23122573)
chr8 (115-209)||(1179946-1180040)
chr8 (115-209)||(15258935-15259029)
chr8 (239-294)||(12831171-12831226)
chr8 (239-294)||(34012217-34012272)
chr8 (135-209)||(8841438-8841512)
chr8 (115-205)||(16056411-16056501)
chr8 (115-205)||(24307803-24307893)
chr8 (115-185)||(34307216-34307286)
chr8 (239-294)||(14548046-14548101)
chr8 (115-186)||(30479503-30479574)
chr8 (115-205)||(32032725-32032814)
chr8 (115-188)||(24307629-24307702)
chr8 (239-283)||(42710226-42710270)
chr8 (239-275)||(44507027-44507063)
chr8 (239-294)||(1179861-1179916)
chr8 (243-281)||(5957958-5957996)
chr8 (243-285)||(8841362-8841404)
chr8 (115-197)||(17443825-17443907)
chr8 (142-204)||(29705466-29705527)
chr8 (243-285)||(42354518-42354560)
chr8 (239-285)||(43414511-43414557)
chr8 (239-294)||(9122309-9122364)
chr8 (239-285)||(4854793-4854839)
chr8 (243-285)||(10284561-10284603)
chr8 (115-197)||(14055610-14055692)
chr8 (239-285)||(15048111-15048157)
chr8 (239-285)||(40423873-40423919)
chr8 (241-294)||(15197459-15197512)
chr8 (142-186)||(2547118-2547161)
chr8 (113-209)||(38229427-38229522)
chr8 (142-186)||(42197370-42197413)
chr8 (115-183)||(42221515-42221583)
chr8 (304-332)||(43605725-43605753)
[»] scaffold1268 (2 HSPs)
scaffold1268 (113-209)||(935-1031)
scaffold1268 (243-281)||(863-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (113-209)||(935-1031)
scaffold1267 (243-281)||(863-901)
[»] scaffold0237 (2 HSPs)
scaffold0237 (115-209)||(4029-4123)
scaffold0237 (239-294)||(4153-4208)
[»] scaffold0321 (2 HSPs)
scaffold0321 (115-209)||(10115-10209)
scaffold0321 (239-294)||(10030-10085)
[»] scaffold0110 (2 HSPs)
scaffold0110 (246-285)||(8793-8832)
scaffold0110 (114-197)||(8881-8964)
[»] scaffold0119 (1 HSPs)
scaffold0119 (142-195)||(798-850)


Alignment Details
Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 2294737 - 2294832
Alignment:
Q  19 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaagagatctactaaaaagtaccataactatcaacacat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2294737 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataataagagatctactaaaaagtaccataactatcaacacat 2294832  T

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Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 40614006 - 40613908
Alignment:
Q  111 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  40614006 acatgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

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Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 38273242 - 38273148
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||| ||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 36168836 - 36168928
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagca 207  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

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Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 7465835 - 7465741
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

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Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2304466 - 2304527
Alignment:
Q  19 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304466 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 2304527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 28863460 - 28863549
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 9058480 - 9058574
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 33436200 - 33436106
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 33436211 - 33436305
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||||| ||| ||||||  ||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcaca 33436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 42257193 - 42257287
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||| |||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 13438341 - 13438437
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| || ||||||| ||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 10249482 - 10249388
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 32505748 - 32505654
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 40701477 - 40701572
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| ||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

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Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 2533124 - 2533217
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||| |||||||||||| |||||||| ||||| | ||||| |||||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

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Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 5574588 - 5574494
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || |||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

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Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 20700815 - 20700909
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| || || |||||||||| |||||||| | ||||||||||| ||| |||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

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Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 30915463 - 30915557
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||| |||||| |||||||| | ||||||||||| | |||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

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Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2322156 - 2322217
Alignment:
Q  19 atgcatagaatagagttatggccaaagtgaaatggtgcttcatgattttcttaataacaaga 80  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  2322156 atgcatagaatagagttatggccagaatgaaatggtacttcatgattttcttaataacaaga 2322217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 19930915 - 19930826
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||| ||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 27864702 - 27864798
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||  |||||||||||||||| ||| |||||||||||| ||||||||   ||||||||||| ||| |||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 28381757 - 28381661
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||  |||||||||||||||| |||||||| | ||| ||||| | |||||||||||    
T  28381757 atgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 43490119 - 43490211
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||||| ||| |||||| || |||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 10249358 - 10249303
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 10249303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 26891604 - 26891510
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||| || |||||| ||||||||||||| |  |||||||||||||||| ||||| |||| ||||||||||  | |||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 41575142 - 41575232
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga-ccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||| |||||||||||| |||  ||||||||||| ||||| |||| || ||||| |||| ||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcaca 41575232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 45097835 - 45097745
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| |||||||||| |||||||||| || || ||||||| |||||||| ||||| |||||||  ||||||| |||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 17820105 - 17820022
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||||||||||||||||||| |  ||| ||||||||||||| || |||||||||||||||| ||||| ||||  ||||||||||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccc 17820022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 32505623 - 32505569
Alignment:
Q  240 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcatta 32505569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 38882913 - 38882832
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||| |||||||||||||| |||||| |||||||| ||||||| ||| |||||||||||| |||||||| | |||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggaccc 38882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 15428840 - 15428767
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 188  Q
    ||||||||||||||| |||||||||  |||| |||||||| ||||||| ||||||||||| ||||| |||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggcca 15428767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 4060684 - 4060779
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| || ||||||||| ||| ||| |||||||||||| |||||||| |  ||||||| || ||| |||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

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Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 5574476 - 5574421
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 5574421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 7465711 - 7465656
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| || |||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 7465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 13438467 - 13438522
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 13438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 17473144 - 17473199
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| || |||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 17473199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 28863579 - 28863634
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| || |||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 28863634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 2997567 - 2997497
Alignment:
Q  135 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

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Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 20700943 - 20700985
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctat 20700985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 33436076 - 33436030
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  33436076 ctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctat 33436030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 13365351 - 13365443
Alignment:
Q  115 gagttatgatacatagacat--ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| |||   ||||||||||||||| |||| || |||||||||||||||| ||||| ||| |||  ||||||| |||||||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 13365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 40613877 - 40613832
Alignment:
Q  240 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctat 40613832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 17823784 - 17823852
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 183  Q
    |||| |||||||||| |||||||||| ||||||||||  | | ||||||||||||||||| ||||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 19930796 - 19930741
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||| || |||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatta 19930741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 27864815 - 27864858
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtc 282  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtc 27864858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 38882787 - 38882732
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||| || |||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcatta 38882732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 36168960 - 36169002
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  36168960 ctaatgtatggggtgtacaagagtgtatgagaataaagggtgt 36169002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||  || ||||||| || || |||||||||||||||| ||||| |||| ||  ||||||| |||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 2533249 - 2533289
Alignment:
Q  241 aatgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgt 2533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 3439985 - 3440073
Alignment:
Q  121 tgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||| |||||| ||||||||||| | |  |||||||||||||||| | ||| |||   |||||||||| |||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 9058604 - 9058644
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggt 279  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggt 9058644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 28381624 - 28381576
Alignment:
Q  246 atggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 28381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 40701602 - 40701657
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||| |||||||||||||||||||  |||||| ||||||||| || |||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatta 40701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 42849794 - 42849848
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  42849794 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 42849848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 3737987 - 3738037
Alignment:
Q  159 acacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||| ||||| |||| || |||||||| |||||||||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 267
Target Start/End: Original strand, 4060809 - 4060837
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatg 267  Q
    |||||||||||||||||||||||||||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatg 4060837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 16096913 - 16096870
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  16096913 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 16096870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 19329838 - 19329936
Alignment:
Q  111 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| |||||||||||    
T  19329838 acatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 35522877 - 35522970
Alignment:
Q  116 agttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||  |||| || |||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 21234399 - 21234495
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||||| || ||||||||||||| |||| ||||||||||| |||||||| ||||| || |||| |||||||||||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 3434562 - 3434656
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||||| | |||||||| || |||||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 7389389 - 7389483
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 38267039 - 38267134
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||  || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| |||| | ||||||||||| |||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 8080483 - 8080389
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | ||||||||||| |||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 36362013 - 36361919
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 38837217 - 38837311
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||  ||||| |||||||||| |||||||| | ||||||||||| |||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 35137531 - 35137627
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||| ||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 46033901 - 46033809
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagca 207  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||| |||||||||| ||| || || | |||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 26296644 - 26296735
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagc 206  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||| ||||| |||||| ||| |||||||||  ||||||| ||||||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagc 26296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 19436287 - 19436193
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||||||| | |||||||| || ||| |||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 31735882 - 31735940
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaa 171  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 36208173 - 36208267
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| |||||| ||| ||||||  | || |||||||||||||||  ||||| |||| |||||||||||||||||||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 36362026 - 36362120
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| ||| |||||| ||||| |||||||||||||||| |||||||| | |||||||||||  ||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 3784000 - 3784089
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 32951588 - 32951499
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||  |||||||| ||||||| ||||||||| |||||||||||| | |||||| | ||||||||||| |||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 22343361 - 22343451
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| ||| |||  ||||||| |||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 32564527 - 32564437
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 204  Q
    |||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||||| ||||| ||||| |  ||||||| ||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaa 32564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 35468955 - 35468861
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||||||||||||||||||||| | ||| ||||||||| |||||| | | | ||| ||| ||||||||||||||| ||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 41915741 - 41915831
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || ||||| |||||||||| ||||| |||||||  ||||||| |||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 4999490 - 4999435
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatta 4999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 19329966 - 19330021
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 19330021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 18207180 - 18207273
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| |||||| ||||||||||||  || ||||||| |||||||| | |||||||| |||||| ||||  ||||||||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcaca 18207273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 19436163 - 19436117
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctat 19436117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38044197 - 38044287
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || ||| |||||||||||| ||||| || ||||  ||||||| |||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 40957707 - 40957801
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||  ||||| ||||||||||| |||| | |||||||||||||| |||||||| | |||||||| || | |||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 3694372 - 3694461
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||| ||| |||||| || ||||||||| |||||||||||||||||||| |||||||| | || ||||| || |||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 8238210 - 8238303
Alignment:
Q  113 atgagttatgatacatagacatcct-tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||||||| ||||| || | ||  ||||||| |||||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 39256024 - 39255944
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 195  Q
    |||||||||||||||||||| |||||| ||||||||||||  || | ||||| |||||||| |||||||||| |||||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggac 39255944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 3434676 - 3434731
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcatta 3434731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 8080355 - 8080304
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 8080304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 32951469 - 32951414
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| || |||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcatta 32951414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 36362138 - 36362193
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| || |||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcatta 36362193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 40846213 - 40846154
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaat 174  Q
    ||||||||||||||| |||||||||| ||||||||||||| || ||| ||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaat 40846154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 40957831 - 40957886
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| || |||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcatta 40957886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 46033777 - 46033731
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  46033777 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctat 46033731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 41423681 - 41423758
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgt 191  Q
    |||||||||||||||||||||| |||||||| ||||||||  || ||||  |||||||||| ||||| |||| |||||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgt 41423758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 36361901 - 36361846
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||| || |||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcatta 36361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 38837341 - 38837396
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||| || |||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatta 38837396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 16374800 - 16374754
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||    
T  16374800 ctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctat 16374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 21234525 - 21234571
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||    
T  21234525 ctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctat 21234571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 31736001 - 31736055
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatt 293  Q
    |||||| |||||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  31736001 ctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaacatt 31736055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 41423810 - 41423848
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  41423810 tgcatggggtgtacaaaggtgtatgagaataaagggtgt 41423848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 46374800 - 46374754
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctat 46374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 32029752 - 32029806
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  32029752 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 32029806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacac 181  Q
    |||| |||||||||||||| |||||| ||| |||||||   || |||||||||||||||| ||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 18207315 - 18207357
Alignment:
Q  251 gtgtacaagggtgtatgagaataaagggtgtctatctaccatt 293  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    
T  18207315 gtgtacaagggtgtatgataataaagggtatctatctaacatt 18207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 35137657 - 35137703
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||||| |||||||||||||||||||| ||| ||| |||||    
T  35137657 ctaatgcatgggatgtacaagggtgtatgagaacaaatggtatctat 35137703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 35523000 - 35523042
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||||| |||||||||||||||||||||| ||||||| |||||    
T  35523000 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgt 35523042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 11044188 - 11044237
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacaccc 164  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| ||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 27744375 - 27744330
Alignment:
Q  149 acaccctttaacacccacacaaaaatatgacacgtggccacgtgga 194  Q
    ||||||||| | |||||||||||||| ||||| |||||||||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtgga 27744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 39255887 - 39255854
Alignment:
Q  252 tgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||| ||||||||||||||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctat 39255854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 32813247 - 32813341
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 26440732 - 26440828
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| |||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 2581915 - 2582009
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 27564837 - 27564741
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||   ||||||||||| |||||||||||    
T  27564837 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 9474977 - 9474882
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||| ||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 38632421 - 38632327
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||| |||||||| | ||||||||||| |||||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 51898783 - 51898689
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 48716383 - 48716288
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| |||||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 8346488 - 8346394
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||| || | |||| |||||||||||| ||| |||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 44548471 - 44548382
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||| |||| |||||||||||| ||| | |||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 37649196 - 37649292
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| |||||||||| |||||| |  | |||||||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 47452422 - 47452326
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| | |||||| | |||||||| || |||||||||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 50591101 - 50591010
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 23597191 - 23597097
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||||| |||| ||||||||||| |||| | ||||||| |||||| |||||||||||||||| |||| ||||||| ||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacaca 23597097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 38595154 - 38595248
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||| ||| | |||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 37926538 - 37926459
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga 194  Q
    ||||||||||||||||| ||| |||| |||||||||| | ||||||||||||| |||||| |||||||||||||| ||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatgga 37926459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 41608594 - 41608511
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||||||||||||||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  |||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccc 41608511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 41758929 - 41758984
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 41758984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 41758805 - 41758899
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| | ||| ||||||||||||||||| ||| |||||||||||| |||||||| | ||| ||||||| |||||| ||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 50630458 - 50630552
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||| | |||||| |||||||||| |||||   |||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 6260868 - 6260964
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||| | |||||||||| |||||| | ||| |||| ||||||||||| ||| |||||||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 27564711 - 27564656
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 27564656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 37649322 - 37649377
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 37649377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 48716258 - 48716203
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 48716203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||  |||||  | ||||||| ||||| |||||||||||||||| |||||||| | ||||||||| | |||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 45044660 - 45044566
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||| |  ||||||| |||||||||||| ||| ||||||| |||||||| ||||| || ||||| ||||||| |||||| ||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 49811627 - 49811533
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||| |||||||||||||| || ||||||||| ||| ||| |||||||||||| |||||||| ||||  | ||| | |||||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtct 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 9474852 - 9474797
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| || |||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcatta 9474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 5959100 - 5959010
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||  ||||||||||||  || |||||||||||||||| ||||| |||| ||  ||||||| |||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 50630582 - 50630628
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  50630582 ctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctat 50630628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 11152472 - 11152385
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcac 208  Q
    |||| ||||||||| |||||| |||||||||||||||  ||| |||||||||||| |||||||| | || || ||||| ||||||||||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 13414791 - 13414855
Alignment:
Q  145 caatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||| |||||||||||||||| | |||||| | |||||||||||  ||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 43256 - 43311
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| || |||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcatta 43311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 7740733 - 7740815
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||||||||||||| |||| |||||  || ||||||| || || ||||| ||| |||||||||||||||||| | ||||||||    
T  7740733 gagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccc 7740815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 32813371 - 32813417
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  32813371 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctat 32813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 49811503 - 49811457
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||    
T  49811503 ctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctat 49811457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 26274437 - 26274522
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||||||||||| |||||  |||||||||| | ||| ||| ||||| |||||| |||||| | | |||||||| ||||||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 45044536 - 45044491
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtcta 284  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||    
T  45044536 ctaatgtatggggtgtacaagggtgtatgagaataaatgatgtcta 45044491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 47748441 - 47748532
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||||| | | |||||| ||||||||||||| || ||||||| | |||||| ||||| |||||||  |||| || |||||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 2582039 - 2582094
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||| |||| ||||||||||||||||| |||||||||||||| ||| || |||||    
T  2582039 ctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcatta 2582094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 7447990 - 7447936
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  7447990 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccc 7447936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 26274553 - 26274608
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| | || ||||||||||||| ||||||||||||||||| || |||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcatta 26274608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 47452292 - 47452241
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||| |||||| |||||||| |||||||| || |||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatta 47452241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 11152350 - 11152308
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||| |||| |||||||||||||| |||||||||    
T  11152350 tgcatggggtgtagaaggatgtatgagaataaatggtgtctat 11152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 37926414 - 37926368
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  37926414 ctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctat 37926368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 44453980 - 44454073
Alignment:
Q  116 agttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||| | |||  |||||||||| |  || | |||||||||||||| ||||| ||||  ||||||| ||  ||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 4401493 - 4401450
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  4401493 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 4401450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 8346363 - 8346327
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaa 275  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  8346363 ctaatgcatggagtgtacaaaggtgtatgagaataaa 8346327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 50448195 - 50448238
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  50448195 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 50448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 26141634 - 26141538
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||||||||    
T  26141634 atgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 53982009 - 53982105
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  53982009 atgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 20765016 - 20764921
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 11348022 - 11347928
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| || ||||||| ||||| ||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 47531865 - 47531959
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||||||  || |||| |||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcaca 47531959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 33644199 - 33644294
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||| | |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 24700054 - 24699960
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||| |||| ||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacaca 24699960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 41189864 - 41189770
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||| |||||||||| |||||||||| | ||| ||||||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 52629304 - 52629394
Alignment:
Q  119 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 17470405 - 17470499
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| | |||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||||||  ||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 49607414 - 49607508
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| ||  ||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 33118951 - 33118872
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga 194  Q
    ||||||||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||| ||| |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 27714991 - 27714897
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| | |||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 35536626 - 35536720
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||  |||||||||||| ||| ||||||||| |||||| |||||||||| || ||||||| | ||||||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 54868995 - 54868901
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  |||||||||| |||||| ||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 31456694 - 31456783
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| || |||  ||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 11095453 - 11095385
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 183  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 26754698 - 26754789
Alignment:
Q  118 ttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||| |||||||| |||||| |||||||||||||||  ||| |||||||||||| ||||| |||| ||| ||||||| |||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 8956762 - 8956856
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| ||||||||| |||||| |||||||||  || ||||||| | ||||||||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcaca 8956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 11095343 - 11095288
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 11095288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 11907371 - 11907465
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| |||||| || |||||||| | | ||||| ||||||||||| ||||| |||| ||  ||||||| |||||||||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| ||||||||||||| || ||||||||| |||||| ||||| |||  || |||||||   ||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 48587186 - 48587101
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||||||||| | |||||| |||||||||||||||| ||||| ||| |||||| |||||||| | |||||||| || |||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 33644324 - 33644379
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcatta 33644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 45058653 - 45058563
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || ||||||||| |||||| ||||| ||| |||  ||||||| |||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 53982135 - 53982190
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatta 53982190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 11347898 - 11347844
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatt 293  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  11347898 ctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 20764891 - 20764845
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  20764891 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctat 20764845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 13898150 - 13898061
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||| |||||||||| ||||||||||||| || ||||||||| |||||| |||||||||  || |||||||   ||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 30801828 - 30801739
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| ||  |||||||||||| | |||||||||||||||||||| || | ||  |||||||  ||||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 30801703 - 30801663
Alignment:
Q  245 catggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  30801703 catggggtgtacaagggtgtatgagaataaaaggtgtctat 30801663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 36707524 - 36707456
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 183  Q
    |||| |||||||||||| | |||||| || ||||||||||||| ||| |||||||||||| ||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 31456813 - 31456868
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||| || |||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcatta 31456868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 36331478 - 36331419
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaat 174  Q
    ||||||||||||||| ||| |||||||||||||| ||||| || ||| ||||||||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaat 36331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 48587077 - 48587022
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||| || |||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcatta 48587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 49607538 - 49607593
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||| || |||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 49607593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 35536754 - 35536796
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  35536754 tgcatggggtgtagaagggtgtatgagaataaatggtgtctat 35536796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||| ||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||| ||| | |||| || ||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 48375806 - 48375712
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||| |||||||| |||||| || |||||||||| | || | ||| |||||||| ||||  |||| ||| ||||||| |||||||||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcaca 48375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 33118822 - 33118781
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtcta 284  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 33118781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 35965757 - 35965712
Alignment:
Q  240 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||    
T  35965757 taattcatgaggtgtacaagggtgtatgagaataaaaggtgtctat 35965712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 40480913 - 40480853
Alignment:
Q  143 ggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 204  Q
    |||||||||||||||| ||||||||||||| | ||||||||||| || |||||||| |||||    
T  40480913 ggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccctacacaa 40480853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  137 ttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||| ||||||| ||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 25395429 - 25395362
Alignment:
Q  119 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||| |||||||||  |||| ||||| || |||| |||||||||||||| ||||| |||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggc 25395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 52629424 - 52629479
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| ||||||||||||||||  ||||| |||||||||| || |||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcatta 52629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 53581793 - 53581847
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||||    
T  53581793 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggaccc 53581847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 54868871 - 54868816
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||| |||||||||||||||||||  |||||| ||||||||| || |||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatta 54868816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 8076521 - 8076563
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||  ||||||||||||||| |||||||||    
T  8076521 tgcatggggtgtacaaaagtgtatgagaataaatggtgtctat 8076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 26141506 - 26141460
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||| |||||||  ||||||||||||||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctat 26141460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 27714873 - 27714824
Alignment:
Q  245 catggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||| |||||||||| |||| ||| || |||||    
T  27714873 catggggtgtacaagggtgtacgagaataaagagtgtatatgtatcatta 27714824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 52629993 - 52629938
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccct 198  Q
    ||||||||||||||||| ||||||||||||| | |||||||| || || ||||||||    
T  52629993 tggcaatacacccttta-cacccacacaaaattctgacacgtagcaacctggaccct 52629938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 7e-31; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 28177773 - 28177869
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||||| ||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 26720515 - 26720610
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 26990264 - 26990359
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||| |||| || |||||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 40145405 - 40145501
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||||||||| |||||||||||    
T  40145405 atgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 2740274 - 2740368
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 18520979 - 18520890
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 6679698 - 6679792
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||| |||||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 15409710 - 15409616
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| || |||||||  |||| |||||||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 33149740 - 33149644
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  33149740 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 2252268 - 2252178
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| |||||||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 36733042 - 36732948
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| | |||||||||||||| |||||||||||||||| |||||| | | ||||||||||| |||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 14831812 - 14831908
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||||||||||||||  ||||| |||||||||||||||| ||||||||| |||||| |||||||| | |||||||| || |||||||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 42414404 - 42414308
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |  ||| |||||||||||||||| |||||||||||||||| |||||||| | || |||||||| |||||||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 13811659 - 13811746
Alignment:
Q  122 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 3921365 - 3921275
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||| ||||||||| ||||||| ||||||||||||| |||| |||| |||||| |  |||||| ||||||||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 35785198 - 35785293
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| |  ||||||| || |||||| ||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 31008988 - 31009082
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||| |||||||||| || |||||||  |||  |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| |  ||||||| ||  ||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 33149614 - 33149559
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatta 33149559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 36875698 - 36875643
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaata 175  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaata 36875643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 2740398 - 2740453
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| || |||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcatta 2740453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 14831938 - 14831993
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 14831993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 18520860 - 18520805
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| || |||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatta 18520805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 31009116 - 31009158
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  31009116 tgcatggggtgtacaaaggtgtatgagaataaagggtgtctat 31009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 10356638 - 10356694
Alignment:
Q  119 tatgatacatagacatccttagatggcaataca-ccctttaacacccacacaaaaat 174  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaat 10356694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 31132458 - 31132513
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||| || |||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcatta 31132513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 35785323 - 35785378
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatta 35785378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 40145531 - 40145586
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||| || |||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcatta 40145586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 6260102 - 6260020
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggacc 196  Q
    ||||| |||||||||| ||| || ||| || |||||||||||||||||||||| ||||||| | |||| ||| ||| ||||||    
T  6260102 tgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacc 6260020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 15409586 - 15409544
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  15409586 ctaatgtatggggtgtacaagggtgtatgcgaataaagggtgt 15409544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 33825424 - 33825330
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||| ||||||||| ||||| ||||||||||| | || ||||||||| |||||| |||||||||  || ||| ||| | ||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcaca 33825330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 38296203 - 38296297
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||   ||||| || |||||||||  |||| ||||||||||||||  ||||||| || ||||||| ||  ||||||||||    
T  38296203 gagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcaca 38296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 16115296 - 16115253
Alignment:
Q  251 gtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||| ||||||||||||||||||||||||| || |||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcatta 16115253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 39688997 - 39688938
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaat 174  Q
    ||||||||||||||| ||| |||||  |||||||||| || || ||||||||||||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaat 39688938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 41470508 - 41470425
Alignment:
Q  123 atacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagc 206  Q
    ||||||||||| | |||| |||||||||| ||||||| |  || | |||||| |||||||| | ||||||||||| ||||||||    
T  41470508 atacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 13811776 - 13811822
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||||| ||||||||| |||||| ||||||| |||||||||    
T  13811776 ctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctat 13811822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 26720640 - 26720686
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||||||||| |||||||||||||||||| | |||||||    
T  26720640 ctaatgtatggggtgtactagggtgtatgagaataaatgatgtctat 26720686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 26990389 - 26990435
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||||||||| |||||||||||||||||| | |||||||    
T  26990389 ctaatgtatggggtgtactagggtgtatgagaataaatgatgtctat 26990435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 21370012 - 21370053
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccc 154  Q
    |||| ||||||||||||||||||||||| ||| |||||||||    
T  21370012 atgaattatgatacatagacatccttaggtggtaatacaccc 21370053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 31976248 - 31976342
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| || |||| |||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 32869676 - 32869772
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| | |||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  32869676 atgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 22880753 - 22880664
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||||||||| | |||||||| | ||||||||||| |||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 17598552 - 17598648
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| |||||||||| | ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 31110859 - 31110767
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||  | ||||||||| ||||||||  |||| |||||||||||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 15508125 - 15508034
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 15990142 - 15990052
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| |||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 30341460 - 30341370
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 4231547 - 4231638
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||| |||| ||||| |||| ||||||||||||| ||  ||||||||||||||| |||||||||||||  ||||||| |||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 9379808 - 9379733
Alignment:
Q  119 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtgga 194  Q
    ||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| ||||||||||||| |||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtgga 9379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 11427742 - 11427797
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 11427797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 11427616 - 11427712
Alignment:
Q  115 gagttatgatacatagacatcct--tagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||  ||| |||||||||| ||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 6209565 - 6209471
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||  ||| |||| ||||||||||| || ||||| | ||||||||||| |||| ||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 31953134 - 31953065
Alignment:
Q  111 acatgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgaca 180  Q
    |||||||| |||||| |||||||||||||| ||||||||||||| || ||||||||| |||||| |||||    
T  31953134 acatgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 29857951 - 29858006
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatta 29858006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 31109501 - 31109418
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||| |||||  ||||||| |||||| |||||||||||||||| ||| |||||||||||| |||||||| | ||||| |||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccc 31109418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 32869802 - 32869857
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 32869857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 28536581 - 28536519
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacg 182  Q
    |||||||||| |||||||||| |||||||||| || || |||||||||||||||| |||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg 28536519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 31976372 - 31976418
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  31976372 ctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctat 31976418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 15832577 - 15832666
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 204  Q
    |||| |||||||||||||| | |||| || ||||| | | ||| |||||||||||||||| |||||||| | |||||||| |||||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 15832701 - 15832746
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtcta 284  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtcta 15832746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 17598678 - 17598733
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatta 17598733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 946383 - 946442
Alignment:
Q  122 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacac 181  Q
    ||||||||||||||||||| ||  |||||||||||| ||||| || ||||||| ||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 12732482 - 12732553
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    |||| ||||||||||||||| ||||  |||||||| |  | || |||||||||||||||| |||||||||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggc 12732553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 22880634 - 22880579
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||| ||| || |||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcatta 22880579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 23128196 - 23128133
Alignment:
Q  146 aatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||||| |||||||||||||||| |||||||| | |||||||| ||  ||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 22422043 - 22422009
Alignment:
Q  251 gtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||||||||||| |||||||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctat 22422009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 31953002 - 31952960
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||| |||| |||||||||||||| |||||||||    
T  31953002 tgcatggggtgtagaaggatgtatgagaataaatggtgtctat 31952960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 26669944 - 26669996
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 195  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  26669944 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 26669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 7367714 - 7367671
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  7367714 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 7367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 28536460 - 28536428
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaa 275  Q
    |||||||||||||||||||||||||| ||||||    
T  28536460 tgcatggggtgtacaagggtgtatgaaaataaa 28536428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 30870148 - 30870184
Alignment:
Q  249 gggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  30870148 gggtgtacaaaggtgtatgaaaataaagggtgtctat 30870184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 50052528 - 50052434
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 11511563 - 11511468
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| |||||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 31910191 - 31910286
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||| |||||| | ||||| ||||||| |||||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 48183149 - 48183055
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||  |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 50526272 - 50526178
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcac 208  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||  | ||||||||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 55475191 - 55475277
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgca 201  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||  |||||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgca 55475277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 6034043 - 6034138
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||| || | |||||||| || |||||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 480547 - 480453
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| | |||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 24995207 - 24995113
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||| || |||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| | ||||||||||| |||||||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 29234345 - 29234251
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| ||||||||||||||||||||||| | |||  ||||||||| |||||||| | ||||||||||| |||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||| |||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 42044467 - 42044373
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||| ||||  |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 40574777 - 40574846
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacg 182  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 54473634 - 54473539
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||||| |||||| || ||||||||| ||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 3481652 - 3481748
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| | |||| ||||||||||| |||| |||||||||||||||| |||||| | | |||||||||||  ||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 19670816 - 19670726
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||  ||||||| |||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 29239886 - 29239980
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||| |||||||||||| | |||||| | |||||||||||  ||||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 32766958 - 32767048
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| |||  ||||| ||||||||||||| || ||||||| |||||||| ||||| |||||||  |||||||||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaag 32767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 48183024 - 48182970
Alignment:
Q  240 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 48182970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 29548059 - 29547986
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 188  Q
    ||||||||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||| |||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggcca 29547986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 6034168 - 6034223
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatta 6034223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 41236471 - 41236526
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatta 41236526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 8343263 - 8343181
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||| |||||||||| |||||||||| ||||| ||||| ||| |||||| ||||| |||||||  |||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccc 8343181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 23608235 - 23608329
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||| |||||||| | |||||| || |  ||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 47986208 - 47986298
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| |||||||||| || || ||| |||||||||||| ||||| |||||||  ||||||| |||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 48647826 - 48647732
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||| ||||| |||||||||| |  |||||||||  |||||||||||| |||||| | |||||||| ||||||||| | |||||||||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 40574910 - 40574957
Alignment:
Q  246 atggggtgtacaagggtgtatgagaataaagggtgtctatctaccatt 293  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  40574910 atggggtgtacaagggtgtatgagaataaaaggtgtctatctaacatt 40574957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 17983823 - 17983753
Alignment:
Q  135 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 24995082 - 24995028
Alignment:
Q  240 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| || |||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcatta 24995028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 29977885 - 29977979
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||| | | || ||| ||||||||||||| ||||||||||||||||||| |||||||| | ||  |||||||  ||||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 47104544 - 47104614
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 185  Q
    |||| |||||| |||||||| |||||||| |||||||| || | |||||||||||||||| ||||||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtgg 47104614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 55079814 - 55079732
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||| ||| |||||| ||||||||||||  || ||||||| |||||||| ||||| |||||||  |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggaccc 55079732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 41823920 - 41823976
Alignment:
Q  153 cctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||| |||||||| | ||| ||||||| |||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 53352661 - 53352574
Alignment:
Q  119 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagca 207  Q
    ||||||||||||||| |||||| | ||||||||  |||||||||| |||||||||| |||||||| |  | |||||||| |||||||||    
T  53352661 tatgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 42044343 - 42044288
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||| || |||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatta 42044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 18769113 - 18769179
Alignment:
Q  119 tatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 185  Q
    ||||||||||| |||||||||  |  | ||||||||| |||||||||||||||||| ||||||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtgg 18769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 29240014 - 29240056
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  29240014 tgcatggggtgtacaagagtgtatgggaataaagggtgtctat 29240056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 41824006 - 41824052
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||    
T  41824006 ctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctat 41824052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 50813992 - 50813922
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 185  Q
    ||||||||||||||| |||  ||||| ||| ||||||||| || |||||||||||||||| ||||| ||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtgg 50813922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 53352539 - 53352495
Alignment:
Q  250 ggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||| |||||||||||||||| || |||||    
T  53352539 ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatta 53352495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 33703307 - 33703245
Alignment:
Q  141 atggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 204  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| || |||| || ||||||    
T  33703307 atggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccgcacaa 33703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 28480368 - 28480286
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||    
T  28480368 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccc 28480286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 28481243 - 28481161
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||    
T  28481243 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccc 28481161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 28482118 - 28482036
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||| ||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||    
T  28482118 gagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccc 28482036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 54473509 - 54473467
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgt 54473467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 18924597 - 18924524
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    |||||||||||| |||| | | |||||| ||||||||||||| || | | |||||||||||| ||||| |||||    
T  18924597 atgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggc 18924524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 43414683 - 43414587
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||| ||| |||| || |||||||||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 15048282 - 15048188
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 4854963 - 4854869
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||| | |||||||| |||||||||||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 504223 - 504127
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 15197331 - 15197427
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||||||||||||||  ||||| |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 12831047 - 12831141
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 37038479 - 37038573
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 10621185 - 10621093
Alignment:
Q  117 gttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||| ||||| | || || |||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 34012398 - 34012302
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||||||||    
T  34012398 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 14547929 - 14548016
Alignment:
Q  122 gatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 10284731 - 10284637
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| |||||  || |||||||| |||| |||||||||||||||| |||||||| | ||||||||||| |||||||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 5957835 - 5957924
Alignment:
Q  120 atgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| || |||||| ||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 23122699 - 23122603
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||| |||||  |||||||||||| ||| |||||||||||||||| |||||||| | ||||||||||| ||| |||||||    
T  23122699 atgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 44507187 - 44507095
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagca 207  Q
    |||| |||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||||| | ||||||||||| | |||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 40424044 - 40423949
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||| |||||||||||| | |||||| |||||||||||||||| ||| |||||||||||| |||||||| | || |||||||| |||||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 16383377 - 16383467
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 20075036 - 20074964
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 185  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||| ||||||||||    
T  20075036 atgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 504097 - 504042
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 504042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 23122573 - 23122518
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatta 23122518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| |||||| ||| |||||||||||| |||||||||||||||| |||||||| | || |||||  | |||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 15259029 - 15258935
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||| |  |||||||||||||||| || |  ||| ||||| |||||| ||||| |||| |||||||||||||||||||||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 12831171 - 12831226
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatta 12831226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 34012272 - 34012217
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatta 34012217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 8841512 - 8841438
Alignment:
Q  135 ccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| ||||| |||||||||| |||||||||||||||| | |||||| | ||||||||||| |||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 16056501 - 16056411
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| |||||||||  || ||||||| || || |||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 24307893 - 24307803
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||  ||||||| |||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaag 24307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 34307216 - 34307286
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtgg 185  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || |||||||||||||||| ||||| ||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 34307286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 14548046 - 14548101
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| || |||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatta 14548101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 30479574 - 30479503
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggc 30479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 32032725 - 32032814
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaag 205  Q
    ||||||||||||||| ||| |||||| |||||||||| || || ||| |||||||||||| ||||| |||||||  |||| ||||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaag 32032814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 24307629 - 24307702
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggcca 188  Q
    ||||||||||||||| ||| |||||| |||||||||| || || |||||||||||||||| ||| | |||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggcca 24307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 42710270 - 42710226
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtct 283  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtct 42710226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 44507063 - 44507027
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaa 275  Q
    |||||||||||||||||||||||||||||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa 44507027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 1179916 - 1179861
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||||| |||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcatta 1179861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 5957958 - 5957996
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  5957958 tgcatgaggtgtacaagggtgtatgagaataaagggtgt 5957996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 8841404 - 8841362
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  8841404 tgcatggggtgtacaagagtgtatgagaataaatggtgtctat 8841362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 17443825 - 17443907
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    ||||||||||||||||||| |||||| || ||||||||   ||||||| ||||||||||| ||||| || | || ||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccc 17443907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaa 204  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || ||||||| ||||||    
T  29705527 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 42354560 - 42354518
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  42354560 tgcatggggtgtagaagggtgtatgagaataaatggtgtctat 42354518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 43414557 - 43414511
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctat 43414511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 9122309 - 9122364
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||| ||||||| ||||||||  ||||||| || |||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcatta 9122364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 4854839 - 4854793
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||| ||||||||||| ||||||||||||| ||||||||    
T  4854839 ctaatgtatgggatgtacaagggtatatgagaataaagagtgtctat 4854793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 10284603 - 10284561
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||||||||||||||| ||||| |||||||| |||||||||    
T  10284603 tgcatggggtgtacaaggttgtataagaataaaaggtgtctat 10284561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 14055692 - 14055610
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||||||||||||| |||| |||||| || |||||||| | || ||| |||||||||||| | ||| || | |||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggaccc 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 15048157 - 15048111
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    |||||| ||||| |||||||||||||||  |||||||||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 40423919 - 40423873
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||| |||| |||||||||||||||||| ||||||| |||||||||    
T  40423919 ctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctat 40423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 15197459 - 15197512
Alignment:
Q  241 aatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    |||||||| |||||||||||||||||| |||||||  |||||||| || |||||    
T  15197459 aatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcatta 15197512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 2547161 - 2547118
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  2547161 tggcaatacacccttta-cacccacacaaaattctgacacgtggc 2547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 38229427 - 38229522
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||  |||  ||||| ||||||||| | |  | |||||||||||||||| ||||| |||| ||||||||  ||| |||||||||    
T  38229427 atgagttatgatacatgaacactcttaggtggcaatacgctc-ctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcaca 38229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 42197370 - 42197413
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggc 186  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  42197370 tggcaatacacccttta-cacccacacaaaattttgacacgtggc 42197413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 42221515 - 42221583
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgt 183  Q
    |||| |||||||||| |||||||||| || |||||||  | |  |||||||||||||||| ||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgt 42221583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Complemental strand, 43605753 - 43605725
Alignment:
Q  304 agaagtgtgttaaggttttattaatctat 332  Q
    |||||||||||||||||||||||||||||    
T  43605753 agaagtgtgttaaggttttattaatctat 43605725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 1031 - 935
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || |||||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 901 - 863
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgt 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 1031 - 935
Alignment:
Q  113 atgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||  |||||||| | |||||| | || |||||||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 901 - 863
Alignment:
Q  243 tgcatggggtgtacaagggtgtatgagaataaagggtgt 281  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  901 tgcatggggtgtacaagagtgtatgggaataaagggtgt 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| || ||| |||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 4153 - 4208
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatta 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 10209 - 10115
Alignment:
Q  115 gagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccctgcacaagcaca 209  Q
    ||||||||||||||||||| | |||| |||||||||| ||||| ||| ||||| |||||| |||||||| | ||||||||||  | |||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

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Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 10085 - 10030
Alignment:
Q  239 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatctaccatta 294  Q
    ||||||||| |||||||||||||||||||  ||||| |||||||||| || |||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcatta 10030  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 8832 - 8793
Alignment:
Q  246 atggggtgtacaagggtgtatgagaataaagggtgtctat 285  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  8832 atggggtgtacaagggtgtataagaataaaaggtgtctat 8793  T

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Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 8964 - 8881
Alignment:
Q  114 tgagttatgatacatagacatccttagatggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggaccc 197  Q
    |||||||||||| |||||||||||||  || ||||||||  ||| ||| | |||||||||| |||||| | | |||||||||||    
T  8964 tgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccc 8881  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 850 - 798
Alignment:
Q  142 tggcaatacaccctttaacacccacacaaaaatatgacacgtggccacgtggac 195  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  850 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggac 798  T

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