View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF10165_high_5 (Length: 326)
Name: NF10165_high_5
Description: NF10165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 20 - 316
Target Start/End: Complemental strand, 3570996 - 3570696
Alignment:
| Q | 20 | taaaggacgaaggcactctaatgaccggatg----aacaaacagattaaaaccaaacacaactccggtaaacctaaaaggtcttcgacactattgagcct | 115 | Q |
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| T | 3570996 | taaaggacgaaggcactctaatgaccggatggatgaacaaacagattaataccaaacacaattccggtaaacctaaaaggtcttcgacgctattgagccc | 3570897 | T |
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| Q | 116 | agagggaaacggctcactgaattaccgtgcggccaaacaatctgaagaatgcaccacaccattccactccacaacattattgcagttgcaggtgcccttc | 215 | Q |
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| T | 3570896 | agagggaaacggctcactgaattaccgagcggccaaacaatctgaagaatgcaccacaccactccactccacaacattattgcagttgcaggtgaccctc | 3570797 | T |
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| Q | 216 | aaaaagtacaaatatattattaccagacaagacaatagatttaaaggtttctagagaaataataattgttattctgttggagtaacctcacgctgtctct | 315 | Q |
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| T | 3570796 | aaaaagtacaaatatattattaccagacaagacaatagaattaaaggtttctagagaaataataattgttattctgttggagtaacctcacgctgtctct | 3570697 | T |
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| Q | 316 | g | 316 | Q |
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| T | 3570696 | g | 3570696 | T |
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