View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10165_high_6 (Length: 299)
Name: NF10165_high_6
Description: NF10165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10165_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 48942679 - 48942886
Alignment:
| Q |
19 |
acttcaaaagccaagtataagttatattgttaaaaccaaaagattaaaacgaacttgtgcataaattagctggtgtgcttttgagaatccaatttgcatc |
118 |
Q |
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| T |
48942679 |
acttcaaaagccaagtataggttatattgttaaaaccaaaagattaaaacgaacttgtgcataaattagctggtgtgcttttgagaatccaatttgcatc |
48942778 |
T |
|
| Q |
119 |
tgggaacattgaagtatattatcaacgcttgtttcacgtaatgctttttctttgaatcgagtttacctaatatttgaaaagaaagacattaatggtataa |
218 |
Q |
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| T |
48942779 |
cgggaacattgaagtatattatcaacgcttgtttcacgtaatgctttttctttgaattgagtttacctaatatttgaaaagaaagacattaatggtataa |
48942878 |
T |
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| Q |
219 |
ttataaga |
226 |
Q |
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|||||||| |
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| T |
48942879 |
ttataaga |
48942886 |
T |
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