View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10165_high_7 (Length: 286)

Name: NF10165_high_7
Description: NF10165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10165_high_7
NF10165_high_7
[»] chr8 (19 HSPs)
chr8 (215-269)||(44474508-44474562)
chr8 (215-268)||(21685023-21685076)
chr8 (215-268)||(21689372-21689425)
chr8 (14-65)||(28506255-28506306)
chr8 (18-67)||(14362077-14362126)
chr8 (215-268)||(20773028-20773080)
chr8 (215-268)||(20782822-20782874)
chr8 (215-259)||(20007425-20007469)
chr8 (215-255)||(21320974-21321014)
chr8 (215-256)||(20257951-20257993)
chr8 (18-67)||(19909283-19909332)
chr8 (215-268)||(21682632-21682684)
chr8 (215-268)||(21931892-21931944)
chr8 (215-268)||(22744884-22744936)
chr8 (223-268)||(23826413-23826457)
chr8 (215-268)||(33090057-33090109)
chr8 (215-255)||(21299108-21299148)
chr8 (215-267)||(21325571-21325623)
chr8 (223-255)||(30765710-30765742)
[»] chr5 (21 HSPs)
chr5 (215-269)||(42241926-42241980)
chr5 (215-269)||(19077654-19077708)
chr5 (219-269)||(31251702-31251752)
chr5 (215-269)||(5337328-5337382)
chr5 (215-268)||(15192939-15192992)
chr5 (215-268)||(23443176-23443228)
chr5 (228-263)||(27634834-27634869)
chr5 (215-269)||(22311779-22311833)
chr5 (215-269)||(22380613-22380667)
chr5 (215-268)||(21900806-21900858)
chr5 (215-268)||(23560546-23560598)
chr5 (18-67)||(30467602-30467651)
chr5 (18-67)||(35399037-35399086)
chr5 (215-268)||(9777306-9777358)
chr5 (219-268)||(18820051-18820099)
chr5 (215-268)||(19512593-19512645)
chr5 (215-268)||(28369850-28369902)
chr5 (18-67)||(29884424-29884473)
chr5 (215-255)||(6403454-6403494)
chr5 (215-255)||(20844216-20844256)
chr5 (223-255)||(21674253-21674285)
[»] chr4 (21 HSPs)
chr4 (215-269)||(37837589-37837643)
chr4 (219-269)||(42596287-42596337)
chr4 (14-67)||(15385029-15385082)
chr4 (14-61)||(6559660-6559707)
chr4 (215-268)||(14991575-14991628)
chr4 (215-268)||(16485799-16485852)
chr4 (215-268)||(17177526-17177578)
chr4 (14-67)||(20306348-20306401)
chr4 (215-255)||(14555020-14555060)
chr4 (215-268)||(15004082-15004135)
chr4 (215-268)||(16228074-16228126)
chr4 (223-268)||(30240203-30240248)
chr4 (215-268)||(30873687-30873739)
chr4 (215-259)||(15359776-15359820)
chr4 (219-268)||(14822529-14822577)
chr4 (223-268)||(15857674-15857718)
chr4 (215-268)||(18272446-18272498)
chr4 (215-268)||(49546744-49546796)
chr4 (215-268)||(53904296-53904348)
chr4 (11-67)||(12783188-12783244)
chr4 (218-266)||(20890454-20890501)
[»] scaffold0031 (3 HSPs)
scaffold0031 (14-67)||(117209-117262)
scaffold0031 (215-268)||(122103-122156)
scaffold0031 (215-268)||(132979-133032)
[»] chr6 (23 HSPs)
chr6 (14-67)||(16769780-16769833)
chr6 (221-269)||(28709759-28709807)
chr6 (215-268)||(18314918-18314971)
chr6 (14-67)||(27643943-27643996)
chr6 (14-65)||(12966246-12966297)
chr6 (216-269)||(13941563-13941616)
chr6 (219-268)||(23106373-23106421)
chr6 (215-254)||(19820059-19820098)
chr6 (215-268)||(9187702-9187754)
chr6 (215-268)||(10582362-10582414)
chr6 (216-265)||(12446163-12446212)
chr6 (18-67)||(13678042-13678091)
chr6 (215-268)||(14132042-14132094)
chr6 (215-268)||(14615237-14615289)
chr6 (18-67)||(18693090-18693139)
chr6 (18-67)||(22482734-22482783)
chr6 (18-67)||(25177139-25177188)
chr6 (215-268)||(25397380-25397432)
chr6 (215-268)||(28288302-28288354)
chr6 (215-255)||(19469019-19469059)
chr6 (220-268)||(22797476-22797524)
chr6 (228-268)||(24721758-24721797)
chr6 (215-255)||(25348709-25348749)
[»] chr3 (37 HSPs)
chr3 (14-67)||(17785258-17785311)
chr3 (14-67)||(19086777-19086830)
chr3 (16-67)||(1988150-1988201)
chr3 (215-269)||(45219208-45219261)
chr3 (221-269)||(5843066-5843114)
chr3 (215-269)||(32387000-32387054)
chr3 (215-268)||(12203452-12203504)
chr3 (215-268)||(12275439-12275492)
chr3 (14-67)||(14454279-14454332)
chr3 (215-268)||(15519642-15519694)
chr3 (14-67)||(15659967-15660020)
chr3 (215-255)||(12364567-12364607)
chr3 (14-65)||(12337467-12337518)
chr3 (215-252)||(12478658-12478695)
chr3 (215-268)||(12536687-12536739)
chr3 (215-268)||(18962079-18962132)
chr3 (215-255)||(11304721-11304761)
chr3 (219-255)||(11938869-11938905)
chr3 (215-269)||(12724113-12724166)
chr3 (215-269)||(30595841-30595894)
chr3 (215-256)||(2269211-2269252)
chr3 (223-268)||(8579050-8579094)
chr3 (215-268)||(9534535-9534587)
chr3 (18-67)||(10598152-10598201)
chr3 (215-268)||(11889416-11889468)
chr3 (215-268)||(12154030-12154082)
chr3 (223-268)||(14085804-14085848)
chr3 (223-268)||(14091205-14091249)
chr3 (18-67)||(14144173-14144222)
chr3 (215-268)||(15953915-15953968)
chr3 (223-268)||(49400804-49400848)
chr3 (215-268)||(54521963-54522015)
chr3 (215-255)||(13298382-13298422)
chr3 (215-255)||(13323592-13323632)
chr3 (223-255)||(13973074-13973106)
chr3 (215-259)||(14570985-14571029)
chr3 (223-255)||(24122059-24122091)
[»] chr2 (32 HSPs)
chr2 (14-67)||(10117913-10117966)
chr2 (14-67)||(29442185-29442238)
chr2 (215-269)||(28970221-28970275)
chr2 (14-67)||(17257786-17257839)
chr2 (215-255)||(24653513-24653553)
chr2 (215-255)||(24659999-24660039)
chr2 (219-255)||(24944523-24944559)
chr2 (215-258)||(23614746-23614789)
chr2 (215-268)||(19036665-19036717)
chr2 (215-268)||(20649256-20649308)
chr2 (215-268)||(25175024-25175076)
chr2 (215-268)||(25268382-25268434)
chr2 (215-255)||(21908578-21908618)
chr2 (228-268)||(23753970-23754009)
chr2 (215-269)||(32910433-32910487)
chr2 (223-268)||(201898-201942)
chr2 (215-268)||(6483926-6483978)
chr2 (215-268)||(6487393-6487445)
chr2 (223-268)||(6743106-6743150)
chr2 (215-256)||(8887800-8887841)
chr2 (223-268)||(17965384-17965428)
chr2 (18-67)||(19799125-19799174)
chr2 (223-268)||(20317036-20317080)
chr2 (18-67)||(21695493-21695542)
chr2 (18-67)||(21710223-21710272)
chr2 (223-268)||(22861153-22861197)
chr2 (18-67)||(34266169-34266218)
chr2 (18-67)||(34308986-34309035)
chr2 (219-255)||(23292120-23292156)
chr2 (219-255)||(23333760-23333796)
chr2 (215-255)||(25106408-25106448)
chr2 (223-255)||(43694684-43694716)
[»] scaffold1128 (1 HSPs)
scaffold1128 (219-269)||(689-739)
[»] scaffold0815 (1 HSPs)
scaffold0815 (215-269)||(1644-1698)
[»] chr1 (26 HSPs)
chr1 (219-269)||(11946632-11946682)
chr1 (14-67)||(20345764-20345817)
chr1 (11-67)||(16403280-16403336)
chr1 (14-67)||(20331321-20331372)
chr1 (219-269)||(43629107-43629157)
chr1 (215-269)||(49329163-49329217)
chr1 (215-268)||(11140060-11140112)
chr1 (215-268)||(19336949-19337002)
chr1 (215-268)||(23713376-23713429)
chr1 (215-268)||(31926257-31926310)
chr1 (220-268)||(21736307-21736354)
chr1 (220-268)||(30490393-30490441)
chr1 (215-268)||(15315459-15315511)
chr1 (215-268)||(16882497-16882549)
chr1 (215-268)||(20850206-20850258)
chr1 (215-268)||(23634693-23634746)
chr1 (215-255)||(19777609-19777649)
chr1 (18-67)||(20323960-20324009)
chr1 (215-268)||(20940803-20940855)
chr1 (215-268)||(21409620-21409672)
chr1 (223-268)||(21543329-21543373)
chr1 (18-67)||(31450087-31450136)
chr1 (215-254)||(20837167-20837207)
chr1 (215-255)||(21665348-21665388)
chr1 (215-255)||(23194311-23194351)
chr1 (223-255)||(42094768-42094800)
[»] scaffold0260 (1 HSPs)
scaffold0260 (14-67)||(8087-8140)
[»] scaffold0134 (1 HSPs)
scaffold0134 (14-67)||(21366-21419)
[»] scaffold0093 (2 HSPs)
scaffold0093 (14-67)||(3521-3574)
scaffold0093 (14-67)||(8144-8197)
[»] scaffold0750 (1 HSPs)
scaffold0750 (14-67)||(1762-1816)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-64)||(384614-384664)
[»] chr7 (35 HSPs)
chr7 (14-64)||(30244001-30244051)
chr7 (221-269)||(11390845-11390893)
chr7 (215-269)||(19463808-19463862)
chr7 (215-268)||(81049-81102)
chr7 (215-268)||(12800560-12800613)
chr7 (215-268)||(45186618-45186671)
chr7 (220-268)||(14580503-14580551)
chr7 (215-268)||(10520955-10521007)
chr7 (215-268)||(13318862-13318915)
chr7 (215-268)||(14168492-14168544)
chr7 (215-268)||(14172739-14172791)
chr7 (215-268)||(14249478-14249530)
chr7 (215-268)||(14264948-14265000)
chr7 (215-268)||(15096916-15096968)
chr7 (215-268)||(19153024-19153076)
chr7 (215-268)||(20752423-20752475)
chr7 (217-268)||(19146703-19146753)
chr7 (217-268)||(20746102-20746152)
chr7 (18-67)||(2147465-2147514)
chr7 (18-67)||(2162676-2162725)
chr7 (18-67)||(6225290-6225339)
chr7 (18-67)||(7366974-7367023)
chr7 (215-268)||(11304390-11304442)
chr7 (215-268)||(15084913-15084965)
chr7 (215-268)||(15103292-15103344)
chr7 (215-268)||(15143374-15143427)
chr7 (215-268)||(15436512-15436564)
chr7 (215-248)||(16184403-16184436)
chr7 (18-67)||(16442204-16442253)
chr7 (18-67)||(16457145-16457194)
chr7 (223-268)||(19617568-19617612)
chr7 (215-268)||(23663922-23663974)
chr7 (215-268)||(29797752-29797804)
chr7 (215-268)||(29801571-29801623)
chr7 (223-255)||(4281333-4281365)
[»] scaffold0679 (1 HSPs)
scaffold0679 (221-269)||(1396-1444)
[»] scaffold1290 (1 HSPs)
scaffold1290 (215-268)||(212-265)
[»] scaffold0402 (2 HSPs)
scaffold0402 (215-268)||(6-59)
scaffold0402 (215-268)||(16109-16162)
[»] scaffold0096 (1 HSPs)
scaffold0096 (215-268)||(4045-4097)
[»] scaffold0010 (2 HSPs)
scaffold0010 (215-268)||(43057-43109)
scaffold0010 (215-268)||(48123-48175)
[»] scaffold0007 (1 HSPs)
scaffold0007 (215-268)||(206679-206732)
[»] scaffold0610 (1 HSPs)
scaffold0610 (215-255)||(6715-6755)
[»] scaffold0367 (1 HSPs)
scaffold0367 (215-255)||(12630-12670)
[»] scaffold0243 (1 HSPs)
scaffold0243 (215-255)||(11278-11318)
[»] scaffold0004 (2 HSPs)
scaffold0004 (215-259)||(322243-322287)
scaffold0004 (223-259)||(327922-327958)
[»] scaffold0516 (1 HSPs)
scaffold0516 (215-268)||(7318-7370)
[»] scaffold0324 (1 HSPs)
scaffold0324 (215-268)||(1808-1860)
[»] scaffold0322 (1 HSPs)
scaffold0322 (18-67)||(14126-14175)
[»] scaffold0282 (1 HSPs)
scaffold0282 (215-268)||(23022-23075)
[»] scaffold0201 (1 HSPs)
scaffold0201 (215-268)||(27478-27530)
[»] scaffold0193 (1 HSPs)
scaffold0193 (215-268)||(1876-1929)
[»] scaffold0180 (1 HSPs)
scaffold0180 (215-268)||(13602-13654)
[»] scaffold0173 (1 HSPs)
scaffold0173 (215-268)||(2463-2515)
[»] scaffold0149 (1 HSPs)
scaffold0149 (215-268)||(13912-13965)
[»] scaffold0102 (2 HSPs)
scaffold0102 (215-268)||(30978-31030)
scaffold0102 (215-262)||(45640-45687)
[»] scaffold0094 (1 HSPs)
scaffold0094 (215-268)||(52447-52500)
[»] scaffold0091 (2 HSPs)
scaffold0091 (215-268)||(21715-21768)
scaffold0091 (215-268)||(25912-25965)
[»] scaffold0076 (3 HSPs)
scaffold0076 (215-268)||(50655-50707)
scaffold0076 (223-268)||(29005-29049)
scaffold0076 (223-268)||(34406-34450)
[»] scaffold0054 (2 HSPs)
scaffold0054 (215-268)||(59397-59450)
scaffold0054 (215-268)||(60961-61014)
[»] scaffold0053 (2 HSPs)
scaffold0053 (215-268)||(78889-78941)
scaffold0053 (220-268)||(71858-71905)
[»] scaffold0050 (1 HSPs)
scaffold0050 (215-268)||(13987-14040)
[»] scaffold0009 (2 HSPs)
scaffold0009 (215-268)||(254657-254710)
scaffold0009 (216-268)||(248145-248197)
[»] scaffold0924 (1 HSPs)
scaffold0924 (215-259)||(3430-3474)
[»] scaffold0506 (1 HSPs)
scaffold0506 (215-255)||(9400-9440)
[»] scaffold0434 (1 HSPs)
scaffold0434 (220-268)||(297-345)
[»] scaffold0331 (1 HSPs)
scaffold0331 (220-268)||(19666-19713)
[»] scaffold0299 (1 HSPs)
scaffold0299 (219-251)||(3510-3542)
[»] scaffold0026 (1 HSPs)
scaffold0026 (220-268)||(121225-121272)
[»] scaffold0002 (1 HSPs)
scaffold0002 (215-255)||(371567-371607)
[»] scaffold0190 (1 HSPs)
scaffold0190 (215-269)||(19095-19149)
[»] scaffold0106 (3 HSPs)
scaffold0106 (215-261)||(45732-45778)
scaffold0106 (215-261)||(50005-50051)
scaffold0106 (223-268)||(39674-39718)
[»] scaffold0022 (2 HSPs)
scaffold0022 (215-256)||(37620-37662)
scaffold0022 (215-256)||(135680-135722)
[»] scaffold0923 (1 HSPs)
scaffold0923 (215-268)||(997-1049)
[»] scaffold0751 (1 HSPs)
scaffold0751 (215-268)||(1576-1628)
[»] scaffold0558 (2 HSPs)
scaffold0558 (18-67)||(1427-1476)
scaffold0558 (18-67)||(4839-4888)
[»] scaffold0555 (1 HSPs)
scaffold0555 (215-268)||(2547-2600)
[»] scaffold0457 (1 HSPs)
scaffold0457 (239-268)||(10722-10751)
[»] scaffold0355 (1 HSPs)
scaffold0355 (18-67)||(12900-12949)
[»] scaffold0326 (2 HSPs)
scaffold0326 (215-268)||(4335-4388)
scaffold0326 (215-268)||(19517-19570)
[»] scaffold0309 (1 HSPs)
scaffold0309 (215-268)||(9332-9384)
[»] scaffold0165 (1 HSPs)
scaffold0165 (215-268)||(711-763)
[»] scaffold0156 (1 HSPs)
scaffold0156 (215-268)||(26757-26809)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-268)||(17383-17435)
[»] scaffold0104 (2 HSPs)
scaffold0104 (223-268)||(12844-12888)
scaffold0104 (215-268)||(40605-40657)
[»] scaffold0078 (1 HSPs)
scaffold0078 (215-268)||(16391-16443)
[»] scaffold0069 (1 HSPs)
scaffold0069 (223-268)||(45629-45673)
[»] scaffold0051 (1 HSPs)
scaffold0051 (215-268)||(61042-61094)
[»] scaffold0037 (1 HSPs)
scaffold0037 (215-268)||(45501-45553)
[»] scaffold0028 (2 HSPs)
scaffold0028 (223-268)||(45839-45883)
scaffold0028 (223-268)||(51243-51287)
[»] scaffold0019 (1 HSPs)
scaffold0019 (215-268)||(13786-13838)
[»] scaffold0017 (2 HSPs)
scaffold0017 (215-268)||(1920-1972)
scaffold0017 (215-255)||(127916-127956)
[»] scaffold0011 (3 HSPs)
scaffold0011 (215-268)||(148128-148179)
scaffold0011 (223-268)||(173421-173465)
scaffold0011 (215-268)||(196407-196459)
[»] scaffold0005 (1 HSPs)
scaffold0005 (219-268)||(17132-17180)
[»] scaffold1164 (1 HSPs)
scaffold1164 (223-255)||(2542-2574)
[»] scaffold1032 (1 HSPs)
scaffold1032 (220-268)||(2594-2641)
[»] scaffold0706 (1 HSPs)
scaffold0706 (219-255)||(2323-2359)
[»] scaffold0405 (1 HSPs)
scaffold0405 (215-255)||(10972-11012)
[»] scaffold0348 (1 HSPs)
scaffold0348 (215-255)||(957-997)
[»] scaffold0127 (1 HSPs)
scaffold0127 (11-67)||(37393-37449)
[»] scaffold0126 (1 HSPs)
scaffold0126 (215-255)||(45387-45427)
[»] scaffold0035 (1 HSPs)
scaffold0035 (215-255)||(11596-11636)
[»] scaffold0034 (1 HSPs)
scaffold0034 (215-259)||(14626-14669)
[»] scaffold0032 (1 HSPs)
scaffold0032 (215-255)||(50588-50628)
[»] scaffold0025 (1 HSPs)
scaffold0025 (215-259)||(77898-77942)


Alignment Details
Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 44474508 - 44474562
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44474508 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 44474562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21685023 - 21685076
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  21685023 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 21685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21689372 - 21689425
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  21689372 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 21689425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 28506255 - 28506306
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcag 65  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||||    
T  28506255 agacaaaatcatgattgaaaatacttcgggacagagacagtaaaatatgcag 28506306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 14362077 - 14362126
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||| ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  14362077 aaaattatgattgaaaatactccgagatggagacagtaagatatgcagat 14362126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 20773028 - 20773080
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  20773028 ggaggttggggagttaattaggatttaataaaattaagggggag-taaatgaaa 20773080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 20782822 - 20782874
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  20782822 ggaggttggggagttaattaggatttaataaaattaagggggag-taaatgaaa 20782874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 20007469 - 20007425
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||    
T  20007469 ggaggttggggagttaattaggaattaatagaattaagggggagt 20007425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 21320974 - 21321014
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  21320974 ggaggttggggagttaattaggatttaatagaattaagggg 21321014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 20257951 - 20257993
Alignment:
Q  215 ggagtttggggaattaa-ttaggatttaatagaattaaggggg 256  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  20257951 ggagtttggggagttaaattaggatttaatagaattaaggggg 20257993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 19909283 - 19909332
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  19909283 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 19909332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21682632 - 21682684
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||| ||| |||||||||| |||||||||||||||||||| |||||||||    
T  21682632 ggaggttgcggagttaattaggaattaatagaattaagggggag-taaatgaaa 21682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 21931944 - 21931892
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||    
T  21931944 ggagtttggggatttaattagaatt-aatagaattaagagggagttaagtgaaa 21931892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 22744936 - 22744884
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  22744936 ggaggttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 22744884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 23826457 - 23826413
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  23826457 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 23826413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 33090109 - 33090057
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||    
T  33090109 ggagtttggggatttaattagaatt-aatagaattaagagggagttaagtgaaa 33090057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 21299108 - 21299148
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  21299108 ggaggttggggagttaattaggaattaatagaattaagggg 21299148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 21325571 - 21325623
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaa 267  Q
    |||| ||||||| |||||||||||||||| ||||| | |||||||| ||||||    
T  21325571 ggaggttggggatttaattaggatttaatggaatttaaggggagtttaatgaa 21325623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 30765710 - 30765742
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  30765710 gggagttaattaggatttaatagaattaagggg 30765742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 42241926 - 42241980
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42241926 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 42241980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 19077708 - 19077654
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19077708 ggagtttggggaattaattaggatttaatagaattaaggtggagttaaatgaaaa 19077654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 31251702 - 31251752
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31251702 tttggagaattaattaggatttaatagaattaagggggagttaaatgaaaa 31251752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 5337328 - 5337382
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  5337328 ggagtttgaggagttaattaatatttaatagaattaagggggagttaaatgaaaa 5337382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15192939 - 15192992
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  15192939 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 15192992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 23443176 - 23443228
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  23443176 ggagtttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 23443228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 27634834 - 27634869
Alignment:
Q  228 ttaattaggatttaatagaattaagggggagttaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
T  27634834 ttaattaggatttaatagaattaagggggagttaaa 27634869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 22311779 - 22311833
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    ||||| |||||| |||||||  |||||||||||||||||||||||| ||||||||    
T  22311779 ggagtgtggggagttaattaatatttaatagaattaagggggagtttaatgaaaa 22311833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 22380667 - 22380613
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| |||||||  ||||||| ||||||||||||||||| |||||||    
T  22380667 ggagtttggggagttaattaatatttaatggaattaagggggagttatatgaaaa 22380613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21900806 - 21900858
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  21900806 ggagtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 21900858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 23560546 - 23560598
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  23560546 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 23560598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 30467602 - 30467651
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| | |||||| |||||||||||||||||||||    
T  30467602 aaaatcatgattgaacatacttcgagacagagacagtaaaatatgcagat 30467651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 35399037 - 35399086
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  35399037 aaaatcatgattgaaaatagtttgagacagagacattaaaatatgcagat 35399086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 9777358 - 9777306
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  9777358 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 9777306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 18820099 - 18820051
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  18820099 tttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 18820051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 19512645 - 19512593
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  19512645 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 19512593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 28369850 - 28369902
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  28369850 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 28369902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 29884424 - 29884473
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  29884424 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 29884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 6403454 - 6403494
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||| ||| ||||||||||||||||||||||||||||    
T  6403454 ggaggttgaggagttaattaggatttaatagaattaagggg 6403494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 20844256 - 20844216
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  20844256 ggaggttggggagttaattaggaattaatagaattaagggg 20844216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 21674253 - 21674285
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  21674253 gggagttaattaggatttaatagaattaagggg 21674285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 37837589 - 37837643
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37837589 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 37837643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 42596287 - 42596337
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42596287 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 42596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 15385082 - 15385029
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15385082 agacaaaatcatgattgaaaatagtccgagaaggagacagtaaaatatgcagat 15385029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 6559660 - 6559707
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatat 61  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6559660 agacaaaatcatgattgaaaatagtccgagacggaaacagtaaaatat 6559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14991575 - 14991628
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  14991575 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 14991628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 16485852 - 16485799
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  16485852 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 16485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 17177578 - 17177526
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17177578 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 17177526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 20306401 - 20306348
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  20306401 agacaaaattatgattgaaaatactccgagatggagacagtaagatatgcagat 20306348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 14555020 - 14555060
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14555020 ggagtttggggagttaattaggatttaatagaattaagggg 14555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15004082 - 15004135
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  15004082 ggagcttggggatttaattagaaattaatagaattaagggagagttaaatgaaa 15004135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 16228074 - 16228126
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  16228074 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 16228126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 30240248 - 30240203
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||    
T  30240248 gggatttaattagaaattaatagaattaagggggagttaaatgaaa 30240203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 30873739 - 30873687
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  30873739 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 30873687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 15359776 - 15359820
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||    
T  15359776 ggaggttggggagttaattaggatttaatagtattaagggggagt 15359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 14822577 - 14822529
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  14822577 tttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 14822529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 15857718 - 15857674
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  15857718 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 15857674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 18272498 - 18272446
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||||||||||||||||| |||||||||    
T  18272498 ggaggttggggagttaattagaaattaatagaattaagggggag-taaatgaaa 18272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 49546744 - 49546796
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  49546744 ggagattggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 49546796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 53904296 - 53904348
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  53904296 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 53904348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 12783244 - 12783188
Alignment:
Q  11 cacagacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||  |||||||||| |  ||||| |||||||||||| ||||||||    
T  12783244 cacagacaaaatcacaattgaaaatactttgagacagagacagtaaaagatgcagat 12783188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 20890501 - 20890454
Alignment:
Q  218 gtttggggaattaattaggatttaatagaattaagggggagttaaatga 266  Q
    ||||||||| ||||| || ||||||||||||||||||||||| ||||||    
T  20890501 gtttggggagttaat-agaatttaatagaattaagggggagtaaaatga 20890454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 117262 - 117209
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  117262 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 117209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 122156 - 122103
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||| || |||||||||| ||||| |||||||||||| |||||||||||    
T  122156 ggaggttggagagttaattaggaattaatggaattaagggggggttaaatgaaa 122103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 133032 - 132979
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||| || |||||||||| ||||| |||||||||||| |||||||||||    
T  133032 ggaggttggagagttaattaggaattaatggaattaagggggggttaaatgaaa 132979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 16769780 - 16769833
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16769780 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 16769833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 28709807 - 28709759
Alignment:
Q  221 tggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28709807 tggggaattaattaggatttaatagaattaagggggagttaaataaaaa 28709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 18314918 - 18314971
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  18314918 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 18314971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 27643996 - 27643943
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  27643996 agacaaaattatgattgaaaatactccgagatggagacagtaagatatgcagat 27643943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 12966246 - 12966297
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcag 65  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||||    
T  12966246 agacaaaatcatgattgaaaatacttcgggacagagacagtaaaatatgcag 12966297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 13941616 - 13941563
Alignment:
Q  216 gagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    ||||||||||| |||||||  |||||||||||||| ||||||| ||||||||||    
T  13941616 gagtttggggagttaattaatatttaatagaattacgggggagctaaatgaaaa 13941563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 23106421 - 23106373
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  23106421 tttggggatttaattagaatt-aatagaattaagggggagttaaatgaaa 23106373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 19820098 - 19820059
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaaggg 254  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  19820098 ggagtttggggagttaattaggatttattagaattaaggg 19820059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 9187754 - 9187702
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||| |||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  9187754 ggagtgtggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 9187702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 10582362 - 10582414
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  10582362 ggaggttggagagttaattaggaattaatagaattaagggggag-taaatgaaa 10582414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 12446163 - 12446212
Alignment:
Q  216 gagtttggggaattaattaggatttaatagaattaagggggagttaaatg 265  Q
    ||||||||||| |||||||| ||||| ||||||||  |||||||||||||    
T  12446163 gagtttggggagttaattagaatttattagaattagtggggagttaaatg 12446212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 13678091 - 13678042
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  13678091 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 13678042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14132042 - 14132094
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| ||| |||||||||||||||||||||| |||||    
T  14132042 ggaggttggggagttaattagaatt-aatagaattaagggggagttaagtgaaa 14132094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14615237 - 14615289
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||| || |||||||||||||||| |||||||| |||||||    
T  14615237 ggagtttggggagttaaataagatttaatagaattaa-ggggagtttaatgaaa 14615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18693139 - 18693090
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| | | | |||||| |||||||||||||||||||||    
T  18693139 aaaatcatgattgaacacacttcgagacagagacagtaaaatatgcagat 18693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22482734 - 22482783
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  22482734 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 22482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 25177188 - 25177139
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| | | | |||||| |||||||||||||||||||||    
T  25177188 aaaatcatgattgaacacacttcgagacagagacagtaaaatatgcagat 25177139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 25397432 - 25397380
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  25397432 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 25397380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 28288302 - 28288354
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  28288302 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 28288354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 19469059 - 19469019
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  19469059 ggaggttggggagttaattaggaattaatagaattaagggg 19469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 22797476 - 22797524
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||| | ||||||||||||||||| ||| ||||||||    
T  22797476 ttggggatttaattagaaattaatagaattaaggggaagtaaaatgaaa 22797524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 24721797 - 24721758
Alignment:
Q  228 ttaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  24721797 ttaattaggaattaatagaattaagggggag-taaatgaaa 24721758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 25348749 - 25348709
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  25348749 ggaggttggggagttaattaggaattaatagaattaagggg 25348709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 17785311 - 17785258
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17785311 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 17785258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 19086830 - 19086777
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19086830 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 19086777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 1988150 - 1988201
Alignment:
Q  16 acaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1988150 acaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 1988201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 45219208 - 45219261
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45219208 ggagtttggggaattaattaggatttaatagaattaaggggg-gttaaatgaaaa 45219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 5843114 - 5843066
Alignment:
Q  221 tggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  5843114 tggggaattaattaggatttaatagaattaagtgggagttaaataaaaa 5843066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 32387000 - 32387054
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  32387000 ggagtttgaggagttaattaatatttaatagaattaagggggagttaaatgaaaa 32387054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 12203504 - 12203452
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  12203504 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 12203452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 12275492 - 12275439
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  12275492 ggaggttggggagttaattagaaattaatagaattaagggggagttaaatgaaa 12275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 14454279 - 14454332
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  14454279 agacaaaattatgattgaaaatactccgagatggagacagtaagatatgcagat 14454332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 15519694 - 15519642
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  15519694 ggagtttggggagttaattaggatttattagaattaagggggag-taaatgaaa 15519642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 15659967 - 15660020
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  15659967 agacaaaattatgattgaaaatactccgagatggagacagtaagatatgcagat 15660020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 12364607 - 12364567
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  12364607 ggagtttggggagttaattaggatttaatagaattaagggg 12364567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 12337518 - 12337467
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcag 65  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||||    
T  12337518 agacaaaatcatgattgaaaatacttcgggacagagacagtaaaatatgcag 12337467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 12478658 - 12478695
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaag 252  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12478658 ggagtttggggagttaattaggatttaatagaattaag 12478695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 12536687 - 12536739
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  12536687 ggaggttggggagttaattaggaattaatagaattaa-ggggagttaaatgaaa 12536739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 18962132 - 18962079
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||    
T  18962132 ggagtttggggagttaattagaatttattagaattaatggggagttaagtgaaa 18962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 11304721 - 11304761
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  11304721 ggagtttggggagttaattaggaattaatagaattaagggg 11304761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 11938869 - 11938905
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11938869 tttggggagttaattaggatttaatagaattaagggg 11938905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 12724113 - 12724166
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| ||| |||  ||||||||||||||| |||||||||||||||||    
T  12724113 ggagtttggggagttatttaatatttaatagaattaa-ggggagttaaatgaaaa 12724166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 30595841 - 30595894
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| ||| |||  ||||||||||||||| |||||||||||||||||    
T  30595841 ggagtttggggagttatttaatatttaatagaattaa-ggggagttaaatgaaaa 30595894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 2269211 - 2269252
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaaggggg 256  Q
    |||||||||||| |||||||||| |||||||||| |||||||    
T  2269211 ggagtttggggagttaattaggaattaatagaatgaaggggg 2269252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 8579050 - 8579094
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  8579050 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 8579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 9534587 - 9534535
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  9534587 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 9534535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 10598201 - 10598152
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  10598201 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 10598152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 11889468 - 11889416
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||||||| || |||||||||    
T  11889468 ggaggttggggagttaattaggaattaatagaattaaggggtag-taaatgaaa 11889416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 12154082 - 12154030
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  12154082 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 12154030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 14085848 - 14085804
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  14085848 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 14085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 14091249 - 14091205
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  14091249 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 14091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 14144173 - 14144222
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| | | | |||||| |||||||||||||||||||||    
T  14144173 aaaatcatgattgaacacacttcgagacagagacagtaaaatatgcagat 14144222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15953915 - 15953968
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||| ||| ||||||| || |||||||||||||||| |||||||||||||    
T  15953915 ggaggttgaggagttaattatgaattaatagaattaagggagagttaaatgaaa 15953968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 49400848 - 49400804
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  49400848 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 49400804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 54522015 - 54521963
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  54522015 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 54521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 13298382 - 13298422
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  13298382 ggaggttggggagttaattagaatttaatagaattaagggg 13298422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 13323592 - 13323632
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  13323592 ggaggttggggagttaattagaatttaatagaattaagggg 13323632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 13973074 - 13973106
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  13973074 gggagttaattaggatttaatagaattaagggg 13973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 14571029 - 14570985
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||||| ||||| |||||||| | |||||||||||||||||||||    
T  14571029 ggagttaggggatttaattagaaattaatagaattaagggggagt 14570985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 24122059 - 24122091
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  24122059 gggagttaattaggatttaatagaattaagggg 24122091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 10117913 - 10117966
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10117913 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 10117966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 29442185 - 29442238
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29442185 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 29442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 28970221 - 28970275
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28970221 ggagtttggggagttaattaggatttaatagaattaagggggagttaaatgaaaa 28970275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 17257839 - 17257786
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  17257839 agacaaaatcatgattgaaaataattcgagacggagacagtaaaatatgcagat 17257786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 24653553 - 24653513
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24653553 ggagtttggggagttaattaggatttaatagaattaagggg 24653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 24660039 - 24659999
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24660039 ggagtttggggagttaattaggatttaatagaattaagggg 24659999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 24944559 - 24944523
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||||||||||||||||||||||||||||    
T  24944559 tttggggaattaattaggatttaatagaattaagggg 24944523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 23614746 - 23614789
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggag 258  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  23614746 ggaggttggggagttaattaggatttaatagaattaagggggag 23614789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 19036717 - 19036665
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  19036717 ggaggttggggagttaattaggaattaatagaattaa-ggggagttaaatgaaa 19036665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 20649308 - 20649256
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  20649308 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 20649256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 25175076 - 25175024
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  25175076 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 25175024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 25268434 - 25268382
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  25268434 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 25268382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 21908618 - 21908578
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  21908618 ggagtgtggggagttaattaggatttaatagaattaagggg 21908578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 23754009 - 23753970
Alignment:
Q  228 ttaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  23754009 ttaattaggatttaatagaattaagggggag-taaatgaaa 23753970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 32910433 - 32910487
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    ||||||| || | |||||||  |||||||||||||||| ||||||||||||||||    
T  32910433 ggagtttaggaagttaattaatatttaatagaattaagagggagttaaatgaaaa 32910487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 201942 - 201898
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  201942 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 201898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 6483978 - 6483926
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  6483978 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 6483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 6487445 - 6487393
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  6487445 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 6487393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 6743106 - 6743150
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  6743106 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 6743150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 8887800 - 8887841
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaaggggg 256  Q
    |||| ||||||| |||||||||| ||||||||||||||||||    
T  8887800 ggaggttggggagttaattaggaattaatagaattaaggggg 8887841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 17965384 - 17965428
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  17965384 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 17965428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 19799174 - 19799125
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  19799174 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 19799125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 20317080 - 20317036
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  20317080 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 20317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 21695493 - 21695542
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| | | | |||||| |||||||||||||||||||||    
T  21695493 aaaatcatgattgaacacacttcgagacagagacagtaaaatatgcagat 21695542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 21710223 - 21710272
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| | | | |||||| |||||||||||||||||||||    
T  21710223 aaaatcatgattgaacacacttcgagacagagacagtaaaatatgcagat 21710272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 22861197 - 22861153
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||    
T  22861197 gggagttaattaggaattaatagaattaagggggag-taaatgaaa 22861153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 34266169 - 34266218
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  34266169 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 34266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 34308986 - 34309035
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  34308986 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 34309035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 23292156 - 23292120
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  23292156 tttgaggagttaattaggatttaatagaattaagggg 23292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 23333796 - 23333760
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  23333796 tttgaggagttaattaggatttaatagaattaagggg 23333760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 25106408 - 25106448
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  25106408 ggaggttggggagttaattaggaattaatagaattaagggg 25106448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 43694716 - 43694684
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  43694716 gggagttaattaggatttaatagaattaagggg 43694684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 739 - 689
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  739 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 1698 - 1644
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1698 ggagtttggggaattaattaggatttaatagaatcaagggggagttaaatgaaaa 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 11946682 - 11946632
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11946682 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 11946632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 20345764 - 20345817
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20345764 agacaaaatcatgattgaaaataatccgagacggagacagtaaaatatgcagat 20345817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16403336 - 16403280
Alignment:
Q  11 cacagacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16403336 cacaggcaaaatcatgattgaaaatactccgagacggagacagtaaaatatgcagat 16403280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 20331321 - 20331372
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  20331321 agacaaaatcat--ttgaaaataatccgagacggagacagtaaaatatgcagat 20331372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 43629107 - 43629157
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||||    
T  43629107 tttggggaattaattaggatttaatagaattaagaggcaattaaatgaaaa 43629157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 49329217 - 49329163
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| |||||||  ||||||||||||||||||||| |||||||||||    
T  49329217 ggagtttggggagttaattaatatttaatagaattaagggggatttaaatgaaaa 49329163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 11140060 - 11140112
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  11140060 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 11140112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 19337002 - 19336949
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  19337002 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 19336949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 23713429 - 23713376
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  23713429 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 23713376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 31926257 - 31926310
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  31926257 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 31926310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 21736354 - 21736307
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  21736354 ttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 21736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 30490393 - 30490441
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  30490393 ttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 30490441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15315459 - 15315511
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  15315459 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 15315511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 16882497 - 16882549
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| ||||||||||||||||| |||||| |||||| |||||||||    
T  16882497 ggagtttggggagttaattaggatttaataaaattaaaggggag-taaatgaaa 16882549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 20850258 - 20850206
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  20850258 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 20850206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 23634746 - 23634693
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  23634746 ggaggttggggatttaattagaaattaatagaattaagggagagttaaatgaaa 23634693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 19777609 - 19777649
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  19777609 ggaggttggggagttaattaggatttaatagaattaagggg 19777649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 20323960 - 20324009
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  20323960 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 20324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 20940803 - 20940855
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| ||||||||||| |||||||||| |||||||||    
T  20940803 ggaggttggggagttaattagaatttaatagaaataagggggag-taaatgaaa 20940855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21409620 - 21409672
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||| |||||||||    
T  21409620 ggaggttggggagttaattaggaattaattgaattaagggggag-taaatgaaa 21409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 21543373 - 21543329
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  21543373 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 21543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 31450087 - 31450136
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  31450087 aaaatcatgattgaacatattttgagacagagacagtaaaatatgcagat 31450136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 20837167 - 20837207
Alignment:
Q  215 ggagtttggggaattaattaggatttaat-agaattaaggg 254  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  20837167 ggagtttggggagttaattaggatttaataagaattaaggg 20837207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 21665388 - 21665348
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| |||| || ||||||||||||||||||||||||||||    
T  21665388 ggaggttggtgagttaattaggatttaatagaattaagggg 21665348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 23194311 - 23194351
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  23194311 ggaggttggggagttaattaggaattaatagaattaagggg 23194351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 42094768 - 42094800
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  42094768 gggagttaattaggatttaatagaattaagggg 42094800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 8087 - 8140
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8087 agacaaaatcatgattgaaaataatccgagacggagacagtaaaatatgcagat 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 21419 - 21366
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21419 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgtagat 21366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 3574 - 3521
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3574 agacaaaatcatgattgaaaatagaccgagacggagacagtaaaatatgcagat 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 8197 - 8144
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8197 agacaaaatcatgattgaaaatagaccgagacggagacagtaaaatatgcagat 8144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 1762 - 1816
Alignment:
Q  14 agacaaaatcatgatt-gaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1762 agacaaaatcatgatttgaaaatagtccgagacggagacagtaaaatatgcagat 1816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 384614 - 384664
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgca 64  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  384614 agacaaaatcatgattgaaaatagtccgagacggaaacagtaaaatatgca 384664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 30244001 - 30244051
Alignment:
Q  14 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgca 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30244001 agacaaaatcatgattgaaaatagtccgagacggagacagtaaaatgtgca 30244051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 11390845 - 11390893
Alignment:
Q  221 tggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11390845 tggggaattaattaggatttaatagaattaagggggagttaaataaaaa 11390893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 19463862 - 19463808
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  19463862 ggagtttggggagttaattaatatttaatagaattaagggggagttaaatgaaaa 19463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 81049 - 81102
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  81049 ggaggttggggagttaattaggaattaatagaattaagggggagttaaatgaaa 81102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 12800560 - 12800613
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  12800560 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 12800613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 45186671 - 45186618
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  45186671 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 45186618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 14580503 - 14580551
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  14580503 ttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 14580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 10521007 - 10520955
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  10521007 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 10520955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 13318915 - 13318862
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||  |||||||||||||||| ||||||||||||    
T  13318915 ggaggttggggagttaattaggaactaatagaattaaggggaagttaaatgaaa 13318862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14168492 - 14168544
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  14168492 ggaggttggggagttaattaggatttaatagaattaaggaggag-taaatgaaa 14168544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14172739 - 14172791
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  14172739 ggaggttggggagttaattaggatttaatagaattaaggaggag-taaatgaaa 14172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14249478 - 14249530
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| | |||||| ||| ||||||||||||||||||||||||||||    
T  14249478 ggagtttggggattaaattagaatt-aatagaattaagggggagttaaatgaaa 14249530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 14264948 - 14265000
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| | |||||| ||| ||||||||||||||||||||||||||||    
T  14264948 ggagtttggggattaaattagaatt-aatagaattaagggggagttaaatgaaa 14265000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15096916 - 15096968
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  15096916 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 15096968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 19153076 - 19153024
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  19153076 ggagtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 19153024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 20752475 - 20752423
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  20752475 ggagtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 20752423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 19146753 - 19146703
Alignment:
Q  217 agtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  19146753 agtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 19146703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 20746152 - 20746102
Alignment:
Q  217 agtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  20746152 agtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 20746102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 2147514 - 2147465
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  2147514 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 2147465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 2162725 - 2162676
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  2162725 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 2162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 6225290 - 6225339
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    |||||||||||| || ||| |  |||||||||||||||||||||||||||    
T  6225290 aaaatcatgattaaacatactttgagacggagacagtaaaatatgcagat 6225339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 7367023 - 7366974
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  7367023 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 7366974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 11304442 - 11304390
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  11304442 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 11304390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15084913 - 15084965
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||| |||||||||| |||||||||    
T  15084913 ggaggttggggagttaattaggaattaatagaagtaagggggag-taaatgaaa 15084965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15103292 - 15103344
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||| |||||||||    
T  15103292 ggaggttggggagttaattaggaattaatcgaattaagggggag-taaatgaaa 15103344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 15143427 - 15143374
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||| ||| |||||||| | ||||||||||||||||||| ||||||||||    
T  15143427 ggaggttgaggatttaattagaaattaatagaattaagggggaattaaatgaaa 15143374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 15436512 - 15436564
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  15436512 ggaggttggagagttaattaggaattaatagaattaaggggga-ttaaatgaaa 15436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 16184403 - 16184436
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaat 248  Q
    |||||||||||| |||||||||||||||||||||    
T  16184403 ggagtttggggagttaattaggatttaatagaat 16184436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 16442204 - 16442253
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  16442204 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 16442253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 16457145 - 16457194
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  16457145 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 16457194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 19617612 - 19617568
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  19617612 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 19617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 23663922 - 23663974
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  23663922 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 23663974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 29797804 - 29797752
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  29797804 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 29797752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 29801623 - 29801571
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  29801623 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 29801571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 4281365 - 4281333
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  4281365 gggagttaattaggatttaatagaattaagggg 4281333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 1396 - 1444
Alignment:
Q  221 tggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1396 tggggaattaattaggatttaatagaattaagagggagttaaataaaaa 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 212 - 265
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  212 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 59 - 6
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  59 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 16162 - 16109
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  16162 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 4097 - 4045
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  4097 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 4045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 43057 - 43109
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  43057 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 43109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 48123 - 48175
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  48123 ggaggttggggagttaattaggatttaatagaattaagggggag-taaatgaaa 48175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 206679 - 206732
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  206679 ggaggttggggatttaattagaaattaatagaattaagggggagttaaatgaaa 206732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 6755 - 6715
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  6755 ggagtttggggagttaattaggatttaatagaattaagggg 6715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 12630 - 12670
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  12630 ggagtttggggagttaattaggatttaatagaattaagggg 12670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 11278 - 11318
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  11278 ggagtttggggagttaattaggatttaatagaattaagggg 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 322287 - 322243
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  322287 ggagtttggggagttaattaggaattaatagaattaagggggagt 322243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 327958 - 327922
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagt 259  Q
    |||| |||||||||| |||||||||||||||||||||    
T  327958 gggagttaattaggaattaatagaattaagggggagt 327922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 7370 - 7318
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  7370 ggaggttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 1808 - 1860
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  1808 ggaggttggggagttaattaggaattaatagaattaa-ggggagttaaatgaaa 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 14175 - 14126
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| | |||||| |||||||||||||||||||||    
T  14175 aaaatcatgattgaacatacttcgagacagagacagtaaaatatgcagat 14126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 23022 - 23075
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||||| ||||||||||||||||    
T  23022 ggaggttggggatttaattagaaattaatagaattaatggggagttaaatgaaa 23075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 27530 - 27478
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  27530 ggagtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 27478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 1876 - 1929
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||| ||||||||||||||||||||||||    
T  1876 ggaggttggggatttaattagaaattaatggaattaagggggagttaaatgaaa 1929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 13654 - 13602
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  13654 ggagtttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 2515 - 2463
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  2515 ggaggttggggagttaattaagatttaatagaattaagggggag-taaatgaaa 2463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 13912 - 13965
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||||| |||||  | ||||||||||||||||||||||||||||||    
T  13912 ggaggttggggaataaattaaaaattaatagaattaagggggagttaaatgaaa 13965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 31030 - 30978
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  31030 ggaggttggggagttaattaggaattaatagaattaa-ggggagttaaatgaaa 30978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 45687 - 45640
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaa 262  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||||||||    
T  45687 ggaggttggggagttaattaggaattaatagaattaaaggggagttaa 45640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 52500 - 52447
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||| ||| |||||||||| |||||| ||||||||||| |||||||||||    
T  52500 ggagtttgaggagttaattaggaattaataaaattaagggggggttaaatgaaa 52447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 21715 - 21768
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  21715 ggaggttggggatttaattaaaaattaatagaattaagggggagttaaatgaaa 21768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 25912 - 25965
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  25912 ggaggttggggatttaattaaaaattaatagaattaagggggagttaaatgaaa 25965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 50655 - 50707
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  50655 ggaggttggggagttaattaggatttaatagaaataagggggag-taaatgaaa 50707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 29005 - 29049
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  29005 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 29049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 34406 - 34450
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  34406 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 34450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 59397 - 59450
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||| || |||||||| | ||||||||||||||||||||||||||||||    
T  59397 ggaggttggagatttaattagaaattaatagaattaagggggagttaaatgaaa 59450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 60961 - 61014
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||  ||||||| | ||||||||||||||||||||||||||||||    
T  60961 ggaggttggggatctaattagaaattaatagaattaagggggagttaaatgaaa 61014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 78889 - 78941
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  78889 ggagtttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 78941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 71858 - 71905
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  71858 ttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 71905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 14040 - 13987
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||||||||||| |||||||||||||||    
T  14040 ggaggttggggatttaattagaaattaatagaattaagagggagttaaatgaaa 13987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 254710 - 254657
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||    
T  254710 ggagtttggggagttaattagaatttattagaattaatggggagttaagtgaaa 254657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 248197 - 248145
Alignment:
Q  216 gagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||||||| |||||||| ||||| || |||||| |||||||||| |||||    
T  248197 gagtttggggagttaattagaatttattaaaattaatggggagttaagtgaaa 248145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 3474 - 3430
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||    
T  3474 ggaggttggggagttaattaggaattaatagaattaagggggagt 3430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 9440 - 9400
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  9440 ggaggttggggagttaattaggatttaatagaattaagggg 9400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 297 - 345
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||| | ||||||||||||||||| ||||||||||||    
T  297 ttggggatttaattagaaattaatagaattaaggggtagttaaatgaaa 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 19713 - 19666
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  19713 ttggggagttaattaggaattaatagaattaagggggag-taaatgaaa 19666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 3542 - 3510
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaa 251  Q
    |||||||||||||||||||||||||||||||||    
T  3542 tttggggaattaattaggatttaatagaattaa 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 121225 - 121272
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||||||    
T  121225 ttggggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 121272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 371607 - 371567
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  371607 ggagtttggggagttaattagtatttaatagaattaagggg 371567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 19095 - 19149
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaaa 269  Q
    |||||||||||| |||||||  ||||||| ||||||||||||||| | |||||||    
T  19095 ggagtttggggagttaattaatatttaattgaattaagggggagtgatatgaaaa 19149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 45732 - 45778
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagtta 261  Q
    |||| ||||||| |||||||||||||||||||||||| ||| |||||    
T  45732 ggaggttggggagttaattaggatttaatagaattaaagggaagtta 45778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 50005 - 50051
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagtta 261  Q
    |||| ||||||| |||||||||||||||||||||||| ||| |||||    
T  50005 ggaggttggggagttaattaggatttaatagaattaaagggaagtta 50051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 39718 - 39674
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  39718 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 39674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 37620 - 37662
Alignment:
Q  215 ggagtttggggaattaa-ttaggatttaatagaattaaggggg 256  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  37620 ggagtttggggagttaaattaggatttaatagaattaaggggg 37662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 135680 - 135722
Alignment:
Q  215 ggagtttggggaattaa-ttaggatttaatagaattaaggggg 256  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  135680 ggagtttggggagttaaattaggatttaatagaattaaggggg 135722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 1049 - 997
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  1049 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 1628 - 1576
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  1628 ggaggttggggatttaattaggaattaatagaattaa-ggggagtttaatgaaa 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 1427 - 1476
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  1427 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 4839 - 4888
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  4839 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 2600 - 2547
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | ||||||||||| | ||||||||||||||||    
T  2600 ggaggttggggatttaattagaaattaatagaattgatggggagttaaatgaaa 2547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 10722 - 10751
Alignment:
Q  239 ttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||||||||||||||||||||||||||    
T  10722 ttaatagaattaagggggagttaaatgaaa 10751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 12949 - 12900
Alignment:
Q  18 aaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||| ||| |  ||||| |||||||||||||||||||||    
T  12949 aaaatcatgattgaacatactttgagacagagacagtaaaatatgcagat 12900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 4335 - 4388
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||| ||| |||||||||||||||||||    
T  4335 ggaggttggggatttaattagaaattaataaaatcaagggggagttaaatgaaa 4388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 19517 - 19570
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||| | |||||| ||| |||||||||||||||||||    
T  19517 ggaggttggggatttaattagaaattaataaaatcaagggggagttaaatgaaa 19570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 9384 - 9332
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||    
T  9384 ggagtttggggatttaattagaatt-aatagaattaagagggagttaagtgaaa 9332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 763 - 711
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| | |||||| ||| |||||||||||| |||||||||||||||    
T  763 ggagtttggggattaaattagaatt-aatagaattaagagggagttaaatgaaa 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 26809 - 26757
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  26809 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 26757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 17383 - 17435
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  17383 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 17435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 12844 - 12888
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  12844 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 40605 - 40657
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| ||||||||||||  ||||||||||||||    
T  40605 ggagtttggggatttaattagaatt-aatagaattaagatggagttaaatgaaa 40657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 16391 - 16443
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||| | |||||||||| |||||||||||||||||||| |||||||||    
T  16391 ggaggttgggtagttaattaggaattaatagaattaagggggag-taaatgaaa 16443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 45629 - 45673
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  45629 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 45673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 61094 - 61042
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  61094 ggaggttggggagttaattaggaattaatagaattaa-ggggagtttaatgaaa 61042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 45553 - 45501
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||| |||||||||    
T  45553 ggaggttggggagttaattaggaattaatagaattaacggggag-taaatgaaa 45501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 45839 - 45883
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  45839 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 45883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 51243 - 51287
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  51243 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 51287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 13838 - 13786
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| | |||||| ||| |||||||||||| |||||||||||||||    
T  13838 ggagtttggggattaaattagaatt-aatagaattaagagggagttaaatgaaa 13786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 1920 - 1972
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| |||| ||||| |||||||||||||||||||| |||||||||    
T  1920 ggaggttggggagttaactaggaattaatagaattaagggggag-taaatgaaa 1972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 127956 - 127916
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  127956 ggaggttggggagttaattaggaattaatagaattaagggg 127916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 148179 - 148128
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| |||||||||    
T  148179 ggagtttggggagttaattagaatt-aatagaattaagggggag-taaatgaaa 148128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 173421 - 173465
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||    
T  173421 gggagttaattaggatttaatagaattaa-ggggagtttaatgaaa 173465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 196407 - 196459
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||| ||||||| ||||||| |||| |||||||||||||||||| |||||||||    
T  196407 ggaggttggggagttaattatgattgaatagaattaagggggag-taaatgaaa 196459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 17132 - 17180
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    |||||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  17132 tttggggatttaattagaatt-aatagaattaagagggagttaaatgaaa 17180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 2542 - 2574
Alignment:
Q  223 gggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||||||||||||||||||||||||    
T  2542 gggagttaattaggatttaatagaattaagggg 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 2594 - 2641
Alignment:
Q  220 ttggggaattaattaggatttaatagaattaagggggagttaaatgaaa 268  Q
    ||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  2594 ttggggagttaattaggaagtaatagaattaagggggag-taaatgaaa 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 2323 - 2359
Alignment:
Q  219 tttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  2323 tttggggagttaattaggattttatagaattaagggg 2359  T

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Target: scaffold0405 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 10972 - 11012
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||| ||| ||||||||||||||||||||||||||||    
T  10972 ggaggttgaggagttaattaggatttaatagaattaagggg 11012  T

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Target: scaffold0348 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 957 - 997
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| | ||||||||||||||||||||||||||    
T  957 ggaggttggggagtgaattaggatttaatagaattaagggg 997  T

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Target: scaffold0127 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 37449 - 37393
Alignment:
Q  11 cacagacaaaatcatgattgaaaatagtccgagacggagacagtaaaatatgcagat 67  Q
    ||||||||||||||  |||||||||| |  ||||| |||||||||||| ||||||||    
T  37449 cacagacaaaatcacaattgaaaatactttgagacagagacagtaaaagatgcagat 37393  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 45427 - 45387
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  45427 ggaggttggggagttaattagaatttaatagaattaagggg 45387  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 11636 - 11596
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  11636 ggaggttggggagttaattaggaattaatagaattaagggg 11596  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 14626 - 14669
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||    
T  14626 ggagtttggggaatta-ttagaatttattagaattaagggggagt 14669  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 50628 - 50588
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggg 255  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
T  50628 ggagtttggggagttaattagaatttattagaattaagggg 50588  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 77942 - 77898
Alignment:
Q  215 ggagtttggggaattaattaggatttaatagaattaagggggagt 259  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||    
T  77942 ggaggttggggagttaattagaaattaatagaattaagggggagt 77898  T

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