View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10165_low_13 (Length: 266)
Name: NF10165_low_13
Description: NF10165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10165_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 11287993 - 11287735
Alignment:
| Q |
1 |
aatacttagataaaaccacacactactttccttcactgtttcttgttccattccatctctttctgccaacac--------tttgttttctctctacctta |
92 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
11287993 |
aatacatagataaaaccacacactactttccttcactgtttcttgttccattccatctctttctgccaacaccttctctctttgttttctctctacctta |
11287894 |
T |
|
| Q |
93 |
ccatcttccaccttcaacctctctttcaactctttaaccattttctatgaaagtgagtggaggctctcttggtcaagagagcctgcacagtgaagaagaa |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11287893 |
ccatcttccaccttcaacctctctttcaactctttaaccattttctatgaaagtgagtggaggctctcttggtcaagagagcctgcacagtgaagaagaa |
11287794 |
T |
|
| Q |
193 |
gagccaaactagcttcatcattttcataaactttcttaccttttttcatataaaaaact |
251 |
Q |
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|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
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| T |
11287793 |
gagccaaactagcttcatcattttcacaaactttcgtaccttttttcatataaaaaact |
11287735 |
T |
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