View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10166_low_15 (Length: 241)
Name: NF10166_low_15
Description: NF10166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10166_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10605852 - 10605630
Alignment:
| Q |
1 |
ctcttttacaaatcagaaaaaccaaatcatgttttaattaataagaatcaagcaataaagagaatgtgaacgaaaagtaaatattatgacgtaaggcaac |
100 |
Q |
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| T |
10605852 |
ctcttttacaaatcagaaaaatcaaatcatgttttaattaataagaatcaagcaataaagagaatgtgaatgaaaagtaaatattatgacgtaaggcaac |
10605753 |
T |
|
| Q |
101 |
ttagtagatgcatattcttataaaccttgtttaatttattttatgaaattctgggaataatatannnnnnngtaaatggataagagaatatatctgtggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
10605752 |
ttagtagatgcatattcttataaaccttgtttaatttattttatgaaattctgggaataatatatttttttgtaaatggataagagaatatatctgtggg |
10605653 |
T |
|
| Q |
201 |
agtgagagagttagtggcattcc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
10605652 |
agtgagagagttagtggcattcc |
10605630 |
T |
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