View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10166_low_8 (Length: 351)
Name: NF10166_low_8
Description: NF10166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10166_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 7996077 - 7995805
Alignment:
| Q |
20 |
atggagatggtgatagtaatgcactaattttgccaactaagaagatgaagaaaaggaaagagatggaacaggtaggaatagtttgaacatgattatgtgt |
119 |
Q |
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| T |
7996077 |
atggagatggtgatagtaatgcactaattttgccaactaagaagatgaagaaaaggaaagagatggaacaggtaggaatagtttgaacatgattatgtgt |
7995978 |
T |
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| Q |
120 |
tctttcaattttcatgtttacacattttgtgtgatcgaaattctgttgtattaggaacgtggaaagaaacgtggtaaagtccaatcaaataagaaacaga |
219 |
Q |
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| T |
7995977 |
tctttcaatttgcatgtttacgcattttgtgtgatcgatattattttgtattaggaacgtggaaagaaacgtggtaaagtccaatcaaataagaaacaga |
7995878 |
T |
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| Q |
220 |
agttgagcaaaactcagaaaaagaagttgaagaaatcagaggtttgtgggggtgtggacaaaaaaggatatga |
292 |
Q |
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| T |
7995877 |
agttgagcaaaactcagaaaaagaagttgaagaaatcagaggtttgtgggggtgtggacaaaaaaggatatga |
7995805 |
T |
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