View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_high_13 (Length: 250)
Name: NF10167_high_13
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 40404897 - 40404658
Alignment:
| Q |
1 |
cagcaaatacacttatgttgaaaacaaggcaaatccatccaatgatagcaagacgttttgctccctttgaaaggtagagagttgatagaagcatggctcc |
100 |
Q |
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| T |
40404897 |
cagcaaatacacttatgttgaaaacaaggcaaatccatccaatgatagcaagacgttttgctccctttgaaaggtagagagttgatagaagcatggctcc |
40404798 |
T |
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| Q |
101 |
aaacccaaacacattcagcaagagaagtagttttatggttgaaagctgtgagaaatgnnnnnnnnnncaaattaattagtacaattttaaaattagtgta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
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| T |
40404797 |
aaacccaaacacattcagcaagagaagtagttttatggttgaaagctgtgagaaatgaaaaaa-----aaataaattagtacaattttaaaattagtgta |
40404703 |
T |
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| Q |
201 |
aacttatttatgagcttaaaagaaatatgtataccctttgcttct |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40404702 |
aacttatttatgagcttaaaagaaatatgtataccctttgtttct |
40404658 |
T |
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