View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_high_8 (Length: 314)
Name: NF10167_high_8
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 303
Target Start/End: Complemental strand, 21600050 - 21599767
Alignment:
| Q |
18 |
caatcaaaatttgattcggattggtttgtgcttctttaagtgtatcttcttctaactgagccaaacaaattgccttctggttagctcttactgtcctttt |
117 |
Q |
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| T |
21600050 |
caatcaaaatttgattcggattggtttgtgcttccttaagtgtatcttcttctaattgagccaaacaaattgccttctagttagctcttactgtcctttt |
21599951 |
T |
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| Q |
118 |
gatctcaagatcatgaagtaattcatccctcgggattttacctcgcataaacaaccaaaaaacatcttagtaacgctacacaataaaagattaaaataag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
21599950 |
gatctcaagatcatgaagtaattcatccctcgggattttacctcgcataaacaaccaaaagacatcttagtaacgctacacaataaaagattaaaataag |
21599851 |
T |
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| Q |
218 |
agctggaatgtgtgtgtgtatatatcaaatttttcaatctattagacnnnnnnntgtaaacataccgaagcaataaaataattcat |
303 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |
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| T |
21599850 |
agctggaatgtgtgtgtgt--atatcaaatttttcaatctattagacaaaaaaatgtaaacataccgaagtaataaaataattcat |
21599767 |
T |
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