View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_low_35 (Length: 253)
Name: NF10167_low_35
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 9378028 - 9378264
Alignment:
| Q |
1 |
taattgtaaaatttaaaaagttcttaatcgtgttggaccctgcaggcactgcaaattcccttggatctaaattgaatttcccttctccaaaacacaagtt |
100 |
Q |
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| T |
9378028 |
taattgtaaaatttaaaaagttcttaatcgtgttggaccctgcaggcactgcaaa--cccttggatctaaattgaatttcccttctccaaaacacaagtt |
9378125 |
T |
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| Q |
101 |
tatgttagacaacttcagaaattacaattctcaaaaagaactattatgatcaaacaagttcatttcaattagtatcttcaaattgtaataatttcatatt |
200 |
Q |
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| T |
9378126 |
tatgttagacaacttaagaaattaaaattctcaaaaagaactattatgatcaaacaagttcatttcaattagtatcttcaaattgtaataatttcatatt |
9378225 |
T |
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| Q |
201 |
aaattgacgtctcgataggattagttttgctaaatttac |
239 |
Q |
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|||||||||||| |||||||||||||||||||||||||| |
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| T |
9378226 |
aaattgacgtcttgataggattagttttgctaaatttac |
9378264 |
T |
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