View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_low_43 (Length: 250)
Name: NF10167_low_43
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_low_43 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 32780518 - 32780733
Alignment:
| Q |
12 |
catataacaccttgtgatgagcattacaacaggcacacttgcaaaagcttattttacttctaacaaatgtaatagcaaatttgtataattacagttttcc |
111 |
Q |
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| T |
32780518 |
catataacaccttgtgatgagcattgcaacaggcacacttgcaaaagcttattttacttctaacaaatgtaatagtaaatttgtataattacggttttcc |
32780617 |
T |
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| Q |
112 |
tactgtggtgtactactgctaaaatcattgaaaattgaattttctacacattccaggaatgcattaaaataaaatattagtatctacattttagata-tt |
210 |
Q |
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| T |
32780618 |
tactgtggtgtactagtgctaaagtcattgaaaattgaattttctacacagtccaggaatgtattcaaataaaagaatagtatctacattttagatattt |
32780717 |
T |
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| Q |
211 |
ttttcccatttaatat |
226 |
Q |
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|||||||||||||||| |
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| T |
32780718 |
ttttcccatttaatat |
32780733 |
T |
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