View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10167_low_48 (Length: 246)

Name: NF10167_low_48
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10167_low_48
NF10167_low_48
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-231)||(9821-10047)
[»] chr2 (75 HSPs)
chr2 (103-231)||(10026621-10026749)
chr2 (107-231)||(38962736-38962860)
chr2 (108-231)||(25540414-25540537)
chr2 (117-231)||(42770670-42770784)
chr2 (107-231)||(38005375-38005499)
chr2 (120-231)||(8410104-8410215)
chr2 (108-231)||(10823033-10823156)
chr2 (117-231)||(331474-331588)
chr2 (108-225)||(44139463-44139580)
chr2 (103-231)||(10046482-10046609)
chr2 (108-199)||(34722685-34722776)
chr2 (103-202)||(41031911-41032010)
chr2 (117-214)||(45263686-45263783)
chr2 (117-233)||(6358170-6358286)
chr2 (121-228)||(3848937-3849044)
chr2 (114-205)||(7787055-7787146)
chr2 (108-231)||(18902540-18902663)
chr2 (148-231)||(41220608-41220691)
chr2 (117-231)||(3643906-3644020)
chr2 (121-231)||(19976830-19976940)
chr2 (117-231)||(22593108-22593221)
chr2 (108-205)||(12455309-12455406)
chr2 (107-231)||(35946712-35946835)
chr2 (121-233)||(37560144-37560256)
chr2 (108-231)||(7747247-7747370)
chr2 (108-203)||(10669593-10669688)
chr2 (108-231)||(11069851-11069974)
chr2 (148-231)||(21286417-21286500)
chr2 (108-231)||(34346297-34346420)
chr2 (108-231)||(44945567-44945689)
chr2 (117-231)||(2550841-2550955)
chr2 (108-222)||(39806895-39807009)
chr2 (108-205)||(3811701-3811798)
chr2 (151-231)||(20612588-20612669)
chr2 (108-205)||(28616389-28616486)
chr2 (117-229)||(9360767-9360879)
chr2 (148-231)||(15234111-15234194)
chr2 (99-205)||(39201509-39201615)
chr2 (108-225)||(13026421-13026538)
chr2 (108-225)||(14169619-14169736)
chr2 (130-231)||(21180346-21180447)
chr2 (108-193)||(27725951-27726036)
chr2 (125-225)||(16034916-16035016)
chr2 (117-225)||(18649045-18649153)
chr2 (151-225)||(34356185-34356259)
chr2 (170-231)||(13513978-13514039)
chr2 (108-197)||(16325602-16325691)
chr2 (117-198)||(24179575-24179655)
chr2 (117-194)||(26805306-26805383)
chr2 (117-206)||(29653625-29653713)
chr2 (150-202)||(2528393-2528445)
chr2 (148-222)||(2149244-2149319)
chr2 (108-231)||(12864197-12864320)
chr2 (114-222)||(14853381-14853491)
chr2 (148-223)||(37804941-37805016)
chr2 (109-231)||(29422188-29422310)
chr2 (148-225)||(15079462-15079539)
chr2 (148-225)||(25604574-25604650)
chr2 (114-205)||(25549727-25549818)
chr2 (122-185)||(28525479-28525542)
chr2 (148-231)||(41187682-41187765)
chr2 (151-205)||(43303345-43303399)
chr2 (122-215)||(5035277-5035370)
chr2 (148-181)||(13104875-13104908)
chr2 (148-205)||(33005751-33005807)
chr2 (130-231)||(41187822-41187923)
chr2 (114-205)||(31740777-31740868)
chr2 (114-205)||(33634455-33634546)
chr2 (108-182)||(20116622-20116696)
chr2 (122-215)||(10106577-10106670)
chr2 (119-184)||(16813186-16813251)
chr2 (119-184)||(16852465-16852530)
chr2 (103-184)||(29421302-29421383)
chr2 (128-185)||(30721885-30721942)
chr2 (148-205)||(40968965-40969022)
[»] chr4 (80 HSPs)
chr4 (108-233)||(36262777-36262900)
chr4 (117-231)||(5472867-5472981)
chr4 (108-231)||(38166005-38166128)
chr4 (103-231)||(47078436-47078564)
chr4 (108-231)||(29895765-29895888)
chr4 (108-225)||(3159479-3159596)
chr4 (108-221)||(40780871-40780984)
chr4 (117-231)||(1940796-1940907)
chr4 (125-231)||(1446804-1446910)
chr4 (103-233)||(3507247-3507376)
chr4 (108-225)||(7246656-7246773)
chr4 (108-225)||(20128293-20128410)
chr4 (109-230)||(20532420-20532541)
chr4 (148-225)||(38075417-38075494)
chr4 (117-225)||(49260684-49260792)
chr4 (120-231)||(41339417-41339528)
chr4 (117-231)||(42722596-42722710)
chr4 (107-231)||(27248406-27248528)
chr4 (118-225)||(6779195-6779302)
chr4 (108-231)||(8889000-8889123)
chr4 (108-231)||(36145225-36145348)
chr4 (108-231)||(52950060-52950183)
chr4 (108-231)||(53599038-53599161)
chr4 (108-198)||(30317244-30317334)
chr4 (108-225)||(15732458-15732575)
chr4 (108-205)||(48015083-48015180)
chr4 (108-232)||(21429278-21429402)
chr4 (121-233)||(43458589-43458701)
chr4 (118-205)||(3574466-3574553)
chr4 (108-231)||(24166428-24166551)
chr4 (148-231)||(40272381-40272464)
chr4 (108-231)||(55921012-55921135)
chr4 (133-231)||(29588714-29588812)
chr4 (125-231)||(48317302-48317408)
chr4 (108-225)||(14858695-14858811)
chr4 (108-205)||(16645122-16645219)
chr4 (117-205)||(14124020-14124108)
chr4 (119-199)||(16450310-16450390)
chr4 (125-205)||(43468351-43468431)
chr4 (127-231)||(55005335-55005439)
chr4 (108-231)||(2559285-2559408)
chr4 (108-231)||(33647699-33647822)
chr4 (114-184)||(17080068-17080138)
chr4 (109-231)||(41162893-41163015)
chr4 (117-221)||(295552-295655)
chr4 (118-205)||(7741929-7742016)
chr4 (108-231)||(13073516-13073639)
chr4 (130-205)||(14567963-14568038)
chr4 (148-231)||(24850677-24850759)
chr4 (108-205)||(10541020-10541116)
chr4 (126-207)||(20354639-20354720)
chr4 (118-182)||(21192667-21192731)
chr4 (108-231)||(4736575-4736698)
chr4 (108-231)||(14077924-14078047)
chr4 (114-172)||(14597916-14597974)
chr4 (108-222)||(15829686-15829800)
chr4 (148-198)||(20421784-20421834)
chr4 (126-196)||(35359749-35359819)
chr4 (117-231)||(38168235-38168348)
chr4 (108-193)||(47682392-47682476)
chr4 (125-205)||(8064825-8064905)
chr4 (117-172)||(14567276-14567331)
chr4 (108-183)||(37369052-37369127)
chr4 (122-205)||(45721090-45721173)
chr4 (108-198)||(4738629-4738719)
chr4 (108-199)||(31588694-31588787)
chr4 (125-231)||(42722406-42722511)
chr4 (148-205)||(26479999-26480056)
chr4 (108-181)||(50485971-50486044)
chr4 (108-233)||(33109298-33109425)
chr4 (108-187)||(18531541-18531620)
chr4 (107-197)||(9548723-9548813)
chr4 (163-205)||(13436816-13436858)
chr4 (108-206)||(24478994-24479092)
chr4 (108-210)||(48834710-48834811)
chr4 (108-231)||(6032653-6032773)
chr4 (115-233)||(7000500-7000613)
chr4 (128-177)||(15839965-15840014)
chr4 (175-231)||(13552092-13552148)
chr4 (107-199)||(26237431-26237523)
[»] chr7 (62 HSPs)
chr7 (108-231)||(1605917-1606040)
chr7 (118-231)||(34659202-34659315)
chr7 (108-225)||(38578877-38578994)
chr7 (108-231)||(22993377-22993500)
chr7 (108-225)||(17748392-17748509)
chr7 (108-231)||(22973943-22974066)
chr7 (108-231)||(48804659-48804782)
chr7 (108-231)||(13095834-13095957)
chr7 (114-231)||(1797436-1797553)
chr7 (108-233)||(18785643-18785768)
chr7 (114-231)||(43861988-43862105)
chr7 (148-231)||(10047926-10048009)
chr7 (148-231)||(47341852-47341935)
chr7 (117-231)||(16802099-16802213)
chr7 (108-221)||(5069825-5069938)
chr7 (127-231)||(21190809-21190913)
chr7 (103-231)||(43346784-43346912)
chr7 (121-205)||(49142692-49142776)
chr7 (108-231)||(27028255-27028378)
chr7 (148-231)||(43925488-43925571)
chr7 (103-205)||(36619259-36619361)
chr7 (108-205)||(3353427-3353523)
chr7 (108-197)||(23658189-23658278)
chr7 (117-205)||(26423306-26423394)
chr7 (108-215)||(28396170-28396277)
chr7 (108-231)||(42210272-42210395)
chr7 (107-205)||(14535293-14535391)
chr7 (118-183)||(41945497-41945562)
chr7 (117-205)||(27875107-27875195)
chr7 (121-205)||(30827294-30827378)
chr7 (108-231)||(21530724-21530847)
chr7 (117-204)||(39474943-39475030)
chr7 (108-231)||(45447946-45448069)
chr7 (117-231)||(14650293-14650407)
chr7 (114-231)||(5039434-5039551)
chr7 (108-185)||(8734696-8734773)
chr7 (108-205)||(10317756-10317852)
chr7 (108-222)||(24969336-24969448)
chr7 (108-231)||(45960013-45960135)
chr7 (117-223)||(4195221-4195327)
chr7 (157-231)||(22268088-22268162)
chr7 (148-205)||(365142-365199)
chr7 (148-233)||(42032070-42032155)
chr7 (125-233)||(20247197-20247304)
chr7 (135-231)||(37514897-37514993)
chr7 (108-196)||(45697200-45697287)
chr7 (117-205)||(3603355-3603447)
chr7 (107-186)||(28744183-28744262)
chr7 (150-205)||(29151942-29151997)
chr7 (130-197)||(32823253-32823320)
chr7 (121-183)||(39420861-39420923)
chr7 (108-186)||(48551878-48551956)
chr7 (114-231)||(4706000-4706117)
chr7 (121-182)||(19914726-19914787)
chr7 (148-197)||(46414685-46414734)
chr7 (125-231)||(4228781-4228884)
chr7 (131-211)||(25197150-25197230)
chr7 (108-160)||(32768984-32769036)
chr7 (118-205)||(4973130-4973217)
chr7 (114-205)||(48244372-48244463)
chr7 (175-231)||(9685715-9685771)
chr7 (117-173)||(38988934-38988990)
[»] scaffold0376 (1 HSPs)
scaffold0376 (108-233)||(12644-12769)
[»] chr8 (53 HSPs)
chr8 (108-217)||(43032892-43033001)
chr8 (117-231)||(18373987-18374101)
chr8 (118-231)||(17981418-17981531)
chr8 (117-231)||(14666090-14666204)
chr8 (113-205)||(33401814-33401906)
chr8 (108-231)||(2964053-2964176)
chr8 (108-231)||(15884566-15884688)
chr8 (137-231)||(13358999-13359093)
chr8 (108-206)||(583816-583912)
chr8 (117-231)||(6100449-6100563)
chr8 (148-225)||(1013027-1013104)
chr8 (108-225)||(8141085-8141202)
chr8 (108-231)||(9860005-9860129)
chr8 (107-231)||(24837219-24837343)
chr8 (108-228)||(45521149-45521268)
chr8 (108-231)||(3418523-3418646)
chr8 (148-231)||(38922464-38922547)
chr8 (108-222)||(10927592-10927706)
chr8 (126-231)||(2467146-2467251)
chr8 (108-205)||(4479306-4479402)
chr8 (112-205)||(6042824-6042917)
chr8 (158-231)||(6940535-6940608)
chr8 (127-231)||(13085501-13085605)
chr8 (117-233)||(14846551-14846666)
chr8 (117-225)||(16893920-16894027)
chr8 (121-221)||(26570911-26571011)
chr8 (148-231)||(34846791-34846873)
chr8 (127-225)||(44031464-44031567)
chr8 (108-231)||(44893288-44893411)
chr8 (124-205)||(33935761-33935842)
chr8 (117-225)||(34710586-34710694)
chr8 (117-198)||(16291222-16291303)
chr8 (108-205)||(43027308-43027405)
chr8 (148-192)||(8586989-8587033)
chr8 (148-231)||(11785893-11785975)
chr8 (112-199)||(27975900-27975987)
chr8 (112-199)||(28033169-28033256)
chr8 (157-231)||(22810057-22810130)
chr8 (108-198)||(23895578-23895668)
chr8 (149-231)||(29933750-29933831)
chr8 (108-189)||(13357966-13358047)
chr8 (123-180)||(18091428-18091485)
chr8 (108-205)||(36662408-36662504)
chr8 (108-200)||(68108-68200)
chr8 (114-186)||(7673673-7673745)
chr8 (108-180)||(24938572-24938644)
chr8 (151-215)||(34613831-34613895)
chr8 (114-198)||(35496271-35496355)
chr8 (113-196)||(22958782-22958865)
chr8 (148-205)||(3567907-3567964)
chr8 (108-172)||(10698937-10699001)
chr8 (117-188)||(22212534-22212606)
chr8 (163-231)||(22276545-22276613)
[»] chr5 (73 HSPs)
chr5 (103-231)||(7866555-7866683)
chr5 (108-231)||(9812846-9812969)
chr5 (108-231)||(12766105-12766228)
chr5 (108-205)||(9805004-9805101)
chr5 (118-221)||(12081892-12081995)
chr5 (108-231)||(12704988-12705111)
chr5 (108-231)||(42086301-42086424)
chr5 (103-205)||(38897724-38897825)
chr5 (108-231)||(20525812-20525935)
chr5 (108-211)||(42291515-42291618)
chr5 (114-231)||(3653930-3654045)
chr5 (103-233)||(4016260-4016390)
chr5 (117-231)||(14974343-14974457)
chr5 (117-231)||(19572698-19572812)
chr5 (107-205)||(23383657-23383755)
chr5 (108-231)||(1538405-1538528)
chr5 (156-231)||(1898975-1899050)
chr5 (108-231)||(7308374-7308497)
chr5 (108-231)||(8513493-8513616)
chr5 (132-231)||(25417217-25417316)
chr5 (110-205)||(30995121-30995216)
chr5 (149-231)||(5731971-5732053)
chr5 (115-205)||(21149734-21149824)
chr5 (108-205)||(37263241-37263337)
chr5 (143-231)||(35403557-35403645)
chr5 (121-205)||(38369700-38369783)
chr5 (114-205)||(18262634-18262725)
chr5 (148-231)||(28857102-28857185)
chr5 (121-231)||(39728361-39728471)
chr5 (150-231)||(18136332-18136413)
chr5 (118-222)||(14588637-14588741)
chr5 (148-231)||(13664234-13664317)
chr5 (108-187)||(39099789-39099868)
chr5 (117-231)||(5079305-5079419)
chr5 (117-187)||(20682636-20682706)
chr5 (114-196)||(40117424-40117506)
chr5 (108-205)||(20228717-20228814)
chr5 (122-198)||(24463910-24463986)
chr5 (121-233)||(35813021-35813133)
chr5 (148-231)||(26077115-26077198)
chr5 (149-231)||(11845852-11845934)
chr5 (121-231)||(23247374-23247484)
chr5 (131-205)||(41800977-41801051)
chr5 (118-231)||(20255343-20255456)
chr5 (119-188)||(43399145-43399214)
chr5 (151-231)||(14152024-14152104)
chr5 (157-205)||(40060296-40060344)
chr5 (107-231)||(41163469-41163592)
chr5 (108-231)||(2485171-2485293)
chr5 (108-206)||(14728081-14728180)
chr5 (108-231)||(15034049-15034172)
chr5 (148-231)||(28862799-28862882)
chr5 (121-231)||(24875319-24875429)
chr5 (151-225)||(30349559-30349633)
chr5 (117-231)||(42861237-42861351)
chr5 (117-182)||(9168272-9168337)
chr5 (122-207)||(19839325-19839410)
chr5 (109-206)||(22295215-22295312)
chr5 (108-184)||(18294494-18294570)
chr5 (157-231)||(16755035-16755109)
chr5 (99-172)||(6764458-6764531)
chr5 (108-225)||(20692913-20693030)
chr5 (122-197)||(21487625-21487697)
chr5 (148-205)||(35006785-35006842)
chr5 (131-198)||(1826864-1826932)
chr5 (148-184)||(20590020-20590056)
chr5 (103-183)||(21375373-21375453)
chr5 (148-196)||(25467419-25467467)
chr5 (115-181)||(7336644-7336710)
chr5 (157-195)||(20516460-20516498)
chr5 (150-215)||(18045629-18045694)
chr5 (148-205)||(20705563-20705620)
chr5 (148-205)||(38297014-38297071)
[»] chr6 (40 HSPs)
chr6 (108-231)||(5253233-5253356)
chr6 (107-226)||(3587954-3588073)
chr6 (108-231)||(6606107-6606230)
chr6 (108-231)||(8611984-8612107)
chr6 (108-231)||(21898625-21898748)
chr6 (108-205)||(3601087-3601184)
chr6 (118-231)||(12606407-12606520)
chr6 (108-231)||(30788863-30788984)
chr6 (117-231)||(10311488-10311602)
chr6 (103-231)||(2271308-2271434)
chr6 (108-225)||(8932644-8932761)
chr6 (108-225)||(8944110-8944227)
chr6 (108-231)||(19089475-19089598)
chr6 (108-230)||(12635792-12635914)
chr6 (108-181)||(9633635-9633708)
chr6 (103-204)||(29444770-29444871)
chr6 (148-231)||(13036054-13036137)
chr6 (109-231)||(9179747-9179869)
chr6 (117-231)||(13468910-13469024)
chr6 (107-200)||(5029825-5029918)
chr6 (117-233)||(11142578-11142694)
chr6 (127-231)||(14107387-14107491)
chr6 (108-231)||(34954629-34954752)
chr6 (119-231)||(9366445-9366556)
chr6 (148-206)||(33859369-33859427)
chr6 (119-231)||(29333160-29333271)
chr6 (148-231)||(9147278-9147361)
chr6 (148-231)||(24671916-24671999)
chr6 (114-180)||(8888910-8888976)
chr6 (127-205)||(13391290-13391367)
chr6 (119-198)||(13627257-13627336)
chr6 (117-231)||(15643853-15643961)
chr6 (121-182)||(17114920-17114981)
chr6 (148-197)||(30410456-30410505)
chr6 (148-192)||(31129193-31129237)
chr6 (108-183)||(32157177-32157252)
chr6 (131-205)||(19230592-19230665)
chr6 (164-221)||(2105156-2105213)
chr6 (150-206)||(10312745-10312801)
chr6 (121-205)||(33940014-33940098)
[»] chr1 (80 HSPs)
chr1 (114-221)||(33498856-33498963)
chr1 (108-230)||(43959832-43959954)
chr1 (117-225)||(37339799-37339908)
chr1 (107-231)||(17642014-17642138)
chr1 (109-231)||(9853289-9853411)
chr1 (117-231)||(11397909-11398022)
chr1 (114-231)||(10336490-10336607)
chr1 (115-231)||(18649370-18649486)
chr1 (117-225)||(18915847-18915955)
chr1 (108-231)||(5855496-5855619)
chr1 (108-231)||(8763965-8764088)
chr1 (108-229)||(14254279-14254400)
chr1 (103-231)||(16956440-16956568)
chr1 (119-231)||(33418137-33418249)
chr1 (155-231)||(34334353-34334429)
chr1 (108-231)||(2567250-2567373)
chr1 (108-231)||(41663867-41663990)
chr1 (108-231)||(50371845-50371968)
chr1 (108-231)||(50503372-50503495)
chr1 (108-233)||(17092488-17092613)
chr1 (131-231)||(2980965-2981065)
chr1 (109-233)||(12036756-12036880)
chr1 (117-205)||(15238126-15238214)
chr1 (107-231)||(34719750-34719874)
chr1 (131-231)||(49078088-49078188)
chr1 (108-231)||(30927738-30927861)
chr1 (148-231)||(31576598-31576681)
chr1 (108-231)||(32142857-32142979)
chr1 (148-231)||(45361933-45362016)
chr1 (108-230)||(15465940-15466062)
chr1 (125-231)||(33004043-33004149)
chr1 (108-225)||(42710149-42710266)
chr1 (119-231)||(10422762-10422874)
chr1 (103-231)||(40288483-40288611)
chr1 (148-231)||(6563415-6563498)
chr1 (108-231)||(26325786-26325909)
chr1 (118-231)||(31152690-31152803)
chr1 (121-205)||(34697335-34697419)
chr1 (148-231)||(17358522-17358605)
chr1 (117-200)||(21849225-21849307)
chr1 (148-231)||(48798121-48798204)
chr1 (117-231)||(9659199-9659312)
chr1 (108-230)||(10172982-10173104)
chr1 (148-222)||(16263528-16263602)
chr1 (108-206)||(44969664-44969761)
chr1 (107-200)||(41696608-41696701)
chr1 (148-225)||(45536688-45536765)
chr1 (125-225)||(13262063-13262163)
chr1 (150-225)||(34877970-34878045)
chr1 (114-205)||(45726450-45726541)
chr1 (119-233)||(5063866-5063979)
chr1 (157-231)||(8905211-8905284)
chr1 (119-225)||(48761156-48761262)
chr1 (108-173)||(4581693-4581758)
chr1 (108-196)||(12744534-12744622)
chr1 (108-196)||(12755524-12755612)
chr1 (149-225)||(31734269-31734344)
chr1 (148-231)||(32845-32928)
chr1 (121-200)||(38859140-38859219)
chr1 (109-231)||(892314-892431)
chr1 (108-198)||(5504038-5504128)
chr1 (135-225)||(14357735-14357825)
chr1 (117-231)||(26258670-26258783)
chr1 (157-231)||(51437443-51437517)
chr1 (114-183)||(5143171-5143239)
chr1 (108-205)||(26660138-26660234)
chr1 (148-205)||(28324631-28324688)
chr1 (125-205)||(35908757-35908838)
chr1 (148-225)||(47312950-47313026)
chr1 (154-198)||(18808272-18808316)
chr1 (117-205)||(25165401-25165488)
chr1 (108-166)||(6899597-6899655)
chr1 (131-205)||(17988694-17988767)
chr1 (108-186)||(38791621-38791699)
chr1 (148-182)||(42744801-42744835)
chr1 (148-229)||(13265914-13265995)
chr1 (121-198)||(32150946-32151023)
chr1 (121-205)||(18708564-18708648)
chr1 (148-180)||(19195391-19195423)
chr1 (108-184)||(50094925-50095001)
[»] chr3 (82 HSPs)
chr3 (103-225)||(30767253-30767375)
chr3 (108-225)||(49198330-49198447)
chr3 (117-225)||(7328823-7328930)
chr3 (108-231)||(35315929-35316052)
chr3 (108-231)||(51060292-51060415)
chr3 (114-231)||(13893899-13894016)
chr3 (109-205)||(8164552-8164648)
chr3 (119-231)||(41630534-41630646)
chr3 (108-231)||(15320159-15320282)
chr3 (103-205)||(30045820-30045922)
chr3 (108-205)||(28572222-28572319)
chr3 (114-231)||(35923640-35923757)
chr3 (131-231)||(6462385-6462485)
chr3 (149-233)||(11687161-11687245)
chr3 (108-204)||(26043812-26043908)
chr3 (117-225)||(29135892-29136000)
chr3 (107-231)||(49543492-49543616)
chr3 (103-231)||(51682960-51683088)
chr3 (108-231)||(47219117-47219240)
chr3 (108-231)||(48341993-48342116)
chr3 (108-199)||(50405614-50405705)
chr3 (108-231)||(53649700-53649823)
chr3 (117-231)||(10040530-10040643)
chr3 (129-231)||(10855357-10855459)
chr3 (117-231)||(25294933-25295047)
chr3 (125-231)||(42412802-42412908)
chr3 (119-225)||(47749127-47749232)
chr3 (108-205)||(3507544-3507641)
chr3 (108-225)||(29127898-29128015)
chr3 (122-231)||(49082797-49082906)
chr3 (117-205)||(7650226-7650314)
chr3 (131-231)||(26207835-26207935)
chr3 (108-231)||(29762166-29762289)
chr3 (110-233)||(40944854-40944976)
chr3 (108-231)||(54261199-54261322)
chr3 (119-233)||(3136716-3136829)
chr3 (118-231)||(928573-928686)
chr3 (119-231)||(31072851-31072963)
chr3 (125-231)||(15795522-15795627)
chr3 (131-225)||(45877433-45877527)
chr3 (110-231)||(3763024-3763144)
chr3 (108-205)||(7310714-7310811)
chr3 (120-225)||(47303512-47303617)
chr3 (119-231)||(32873571-32873682)
chr3 (108-180)||(43330743-43330815)
chr3 (121-188)||(7648756-7648823)
chr3 (148-231)||(52364851-52364934)
chr3 (121-231)||(33251635-33251745)
chr3 (150-199)||(26590319-26590368)
chr3 (108-205)||(47471831-47471927)
chr3 (119-231)||(3755543-3755655)
chr3 (122-198)||(4638160-4638236)
chr3 (121-205)||(23511566-23511650)
chr3 (158-205)||(7612987-7613034)
chr3 (114-197)||(41219599-41219682)
chr3 (108-183)||(55069690-55069765)
chr3 (108-198)||(26361978-26362068)
chr3 (126-200)||(39849076-39849149)
chr3 (148-222)||(54237430-54237504)
chr3 (108-205)||(8362576-8362673)
chr3 (108-201)||(24506659-24506751)
chr3 (130-231)||(28242251-28242352)
chr3 (108-225)||(35998582-35998698)
chr3 (117-214)||(40660347-40660444)
chr3 (108-196)||(19146969-19147057)
chr3 (107-219)||(45402361-45402473)
chr3 (151-205)||(46529924-46529978)
chr3 (103-216)||(22909772-22909884)
chr3 (170-231)||(30735018-30735079)
chr3 (108-188)||(34374453-34374533)
chr3 (108-164)||(44064584-44064640)
chr3 (117-180)||(2668085-2668148)
chr3 (148-223)||(33688932-33689007)
chr3 (148-231)||(45450498-45450579)
chr3 (151-205)||(13167497-13167551)
chr3 (111-225)||(38394189-38394301)
chr3 (159-233)||(50682448-50682522)
chr3 (154-231)||(5549270-5549346)
chr3 (118-215)||(22405564-22405661)
chr3 (150-182)||(19873388-19873420)
chr3 (148-200)||(41223089-41223140)
chr3 (108-168)||(49021214-49021274)
[»] scaffold0006 (1 HSPs)
scaffold0006 (117-231)||(68493-68604)
[»] scaffold0291 (1 HSPs)
scaffold0291 (108-205)||(6857-6954)
[»] scaffold0010 (2 HSPs)
scaffold0010 (117-196)||(155730-155809)
scaffold0010 (108-198)||(25794-25884)
[»] scaffold0016 (1 HSPs)
scaffold0016 (107-205)||(8710-8808)
[»] scaffold0005 (4 HSPs)
scaffold0005 (127-231)||(271103-271207)
scaffold0005 (130-205)||(249337-249412)
scaffold0005 (114-172)||(219404-219462)
scaffold0005 (117-172)||(250044-250099)
[»] scaffold0209 (1 HSPs)
scaffold0209 (108-206)||(12576-12672)
[»] scaffold0004 (2 HSPs)
scaffold0004 (108-224)||(7845-7961)
scaffold0004 (117-180)||(94999-95063)
[»] scaffold0029 (1 HSPs)
scaffold0029 (118-205)||(41046-41133)
[»] scaffold0002 (4 HSPs)
scaffold0002 (117-231)||(319398-319512)
scaffold0002 (108-231)||(546-669)
scaffold0002 (163-231)||(412091-412159)
scaffold0002 (151-205)||(139437-139491)
[»] scaffold0341 (1 HSPs)
scaffold0341 (148-231)||(18608-18691)
[»] scaffold0086 (1 HSPs)
scaffold0086 (126-205)||(26185-26264)
[»] scaffold0079 (1 HSPs)
scaffold0079 (150-231)||(8151-8231)
[»] scaffold0009 (2 HSPs)
scaffold0009 (108-205)||(42842-42939)
scaffold0009 (164-205)||(9438-9479)
[»] scaffold0316 (1 HSPs)
scaffold0316 (117-205)||(1633-1721)
[»] scaffold0024 (1 HSPs)
scaffold0024 (108-196)||(149396-149484)
[»] scaffold0223 (1 HSPs)
scaffold0223 (117-199)||(16887-16969)
[»] scaffold0013 (1 HSPs)
scaffold0013 (108-203)||(51735-51826)
[»] scaffold0050 (1 HSPs)
scaffold0050 (153-231)||(72609-72686)
[»] scaffold0384 (1 HSPs)
scaffold0384 (108-205)||(5975-6071)
[»] scaffold0011 (2 HSPs)
scaffold0011 (108-221)||(224303-224416)
scaffold0011 (131-221)||(186504-186593)
[»] scaffold0116 (1 HSPs)
scaffold0116 (108-196)||(17401-17489)
[»] scaffold0041 (1 HSPs)
scaffold0041 (108-184)||(25108-25184)
[»] scaffold0001 (1 HSPs)
scaffold0001 (148-184)||(65202-65238)
[»] scaffold0635 (1 HSPs)
scaffold0635 (122-215)||(2114-2207)


Alignment Details
Target: scaffold0170 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 10047 - 9821
Alignment:
Q  1 caaggtgtggagttttctccataattcttgaaaaatgtgtggatattttaatatatttatgatttattaaaaatgccaannnnnnnnnnnnnnnnggctt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                |||||    
T  10047 caaggtgtggagttttctccataattcttgaaaattgtgtggatattttaatatatttatgatttattaaaaatgccaattttattttttt----ggctt 9952  T
Q  101 ttcactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    |||||| |||||||| ||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||  ||||||| |||    
T  9951 ttcactggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccg 9852  T
Q  201 gtattttccggatacatccttggaatgagct 231  Q
    |||||   | ||||||||||||||| |||||    
T  9851 gtattcctcagatacatccttggaaggagct 9821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 10026621 - 10026749
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||| || ||||||||||||| |||||||||||  ||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10026621 cactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggt 10026720  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    ||||||||  ||| ||||||||| |||||    
T  10026721 attttccgagtacgtccttggaaggagct 10026749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 38962860 - 38962736
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||||||| ||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  38962860 agtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattc 38962761  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||||||| |||||| ||||||||    
T  38962760 cccggatacgtccttgaaatgagct 38962736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 25540414 - 25540537
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||      
T  25540414 gtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattcc 25540513  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || ||||| |||||||||||||||    
T  25540514 ccagatacgtccttggaatgagct 25540537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 42770670 - 42770784
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| ||| |||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||     
T  42770670 ccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacg 42770769  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  42770770 tccttggaaggagct 42770784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 38005499 - 38005375
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| ||||||||||||||||||||||||||||  ||  | ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||     
T  38005499 agtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattc 38005400  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||| ||| ||||||||| |||||    
T  38005399 cccgggtacgtccttggaaggagct 38005375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 8410215 - 8410104
Alignment:
Q  120 ccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcc 219  Q
    ||||| ||||||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||| ||| |||    
T  8410215 ccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtcc 8410116  T
Q  220 ttggaatgagct 231  Q
    |||||| |||||    
T  8410115 ttggaaggagct 8410104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 10823156 - 10823033
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||      
T  10823156 gtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattcc 10823057  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  10823056 ccgggtacgtccttggaaggagct 10823033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 331588 - 331474
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||  ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||  |||| |||     
T  331588 ccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacg 331489  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  331488 tccttggaaagagct 331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 44139580 - 44139463
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||  |||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||      
T  44139580 gtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 44139481  T
Q  208 ccggatacatccttggaa 225  Q
    || ||| |||||||||||    
T  44139480 ccagatgcatccttggaa 44139463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 10046482 - 10046609
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||| || ||||||||||||| |||||||||||  ||  ||||||||||||||||||| | ||| ||||||| ||| |||||||||||||||||    
T  10046482 cactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaacccggt 10046580  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    ||| ||||||||| | ||||||| |||||    
T  10046581 attctccggatacgttcttggaaggagct 10046609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 34722776 - 34722685
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||||||||||| |||||||||||||||||||||  ||| |||||||| |||| |||||| ||||||||||||| |||||||||||||||||    
T  34722776 gtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaaccc 34722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 41031911 - 41032010
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || |||||||||||||| ||||||||||  ||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  41031911 cactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggt 41032010  T

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Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 45263686 - 45263783
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggata 214  Q
    ||||||||| || |||| |||||||  ||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||    
T  45263686 ccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggata 45263783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 233
Target Start/End: Original strand, 6358170 - 6358286
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||| |||||||||||  ||  |||||||||||||||||||||||||| |||||||||||||  ||||||| | ||||||  ||||||||     
T  6358170 ccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacg 6358269  T
Q  217 tccttggaatgagcttc 233  Q
    ||||| |||||||||||    
T  6358270 tcctttgaatgagcttc 6358286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 3848937 - 3849044
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||  |||||||||||| ||| |||||||| ||||||| |||||||| ||||||| ||||||| |||||||||||||||| ||| ||||| ||||    
T  3848937 caaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattctccagatacgtcct 3849036  T
Q  221 tggaatga 228  Q
    || |||||    
T  3849037 tgaaatga 3849044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 7787146 - 7787055
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| |||||||||||||||  ||| ||||||||||||||| ||||||||||  ||||||||||||  ||||||||||||||||    
T  7787146 gatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtatt 7787055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 18902540 - 18902663
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||||||||||||| |  ||| |||||||| || ||||||||| ||||||||||||||| || |||||||||||||||||      
T  18902540 gtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattcc 18902639  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||  ||| ||||||||| |||||    
T  18902640 ccgagtacgtccttggaaggagct 18902663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 41220691 - 41220608
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |||| ||| ||||||||| |||||    
T  41220691 gcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagct 41220608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 3643906 - 3644020
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| ||||||||||   ||  ||||||||||||||||||||||||||||||||||| | |   |||| |||||||||||  ||||||||     
T  3643906 ccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacg 3644005  T
Q  217 tccttggaatgagct 231  Q
    |||||||||||||||    
T  3644006 tccttggaatgagct 3644020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 19976830 - 19976940
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    |||||||||||||||||| ||| |   |||||||| ||||||||||| |||| |||| |||||||||| ||||||||||||||||  |||||||| ||||    
T  19976830 caaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtcct 19976929  T
Q  221 tggaatgagct 231  Q
    ||||| |||||    
T  19976930 tggaaagagct 19976940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 22593221 - 22593108
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||||||||||  ||  ||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||  |||| |||     
T  22593221 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacg 22593123  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  22593122 tccttggaaggagct 22593108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 12455406 - 12455309
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||| |||| ||||||||||||  ||| |||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  12455406 gtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtatt 12455309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 35946835 - 35946712
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || ||||||| ||||| |||||||||||  ||| |||||||||||||| || ||||||||||||||| |||||  ||||||||| |||||||     
T  35946835 agtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgtt-cccctaggaatcgaactcggtattc 35946737  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||||||| ||||| |||||||||    
T  35946736 cccggatacgtccttagaatgagct 35946712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 37560256 - 37560144
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| ||| |||||||  ||| |||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||   ||| ||| ||||    
T  37560256 caaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtcct 37560157  T
Q  221 tggaatgagcttc 233  Q
    ||||| |||||||    
T  37560156 tggaaggagcttc 37560144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 7747370 - 7747247
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| |||||||  |||||||||||  ||  |||||||||||||| |||||||||| ||||||||| |||  |||||||||||||||||      
T  7747370 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattcc 7747271  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  7747270 ccggatacgtccttggaaggagct 7747247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 10669688 - 10669593
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggta 203  Q
    ||||| || ||||||||||||  ||| |||||||| ||| |||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  10669688 gtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 11069974 - 11069851
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||| |   ||| ||||||||| ||||||||||||||| |||||||||||||  |||||||||| ||||||      
T  11069974 gtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattcc 11069875  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| |||||||||||||||    
T  11069874 ccgggtacgtccttggaatgagct 11069851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 21286500 - 21286417
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||| ||||||||||| | |||| |||||||||||||||||  |||||||| ||||||||| |||||    
T  21286500 gcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagct 21286417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 34346297 - 34346420
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| |||| ||||| || ||  |||||||||||||| ||||||||||| |||||||||||||| |||| ||||| |||||      
T  34346297 gtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattcc 34346396  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| |||||||||||||||    
T  34346397 ccaggtacgtccttggaatgagct 34346420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 44945689 - 44945567
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| ||||||| ||||||||||||||||||||  ||| |||||||||||||||||||  |||||||||||| || ||| ||||| ||||| ||||| |    
T  44945689 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgtt-cctctgggaatcaaacccagtattct 44945591  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||  ||| ||||||||| |||||    
T  44945590 ccgagtacgtccttggaaggagct 44945567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 2550955 - 2550841
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||| ||||||||||||||||  ||  |||||||| ||||||||||||| ||| |||||||| |||| |||||||||||| ||||  ||||||||     
T  2550955 ccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacg 2550856  T
Q  217 tccttggaatgagct 231  Q
    |||||| || |||||    
T  2550855 tccttgtaaggagct 2550841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 39806895 - 39807009
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||| ||| |||||||||||||  ||||||||||| ||| | ||||||||||||||||||||||| ||||||| | | || |||||||||||||||||      
T  39806895 gtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattcc 39806994  T
Q  208 ccggatacatccttg 222  Q
    |||| ||| ||||||    
T  39806995 ccgggtacgtccttg 39807009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 3811701 - 3811798
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| ||||||||||||||||| |||||||  ||  ||||||||||||||||| || ||||| ||||||||| ||| |||||||||||| ||||    
T  3811701 gtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatatt 3811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 20612588 - 20612669
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccc-cctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||| ||||| |||||||| |||||    
T  20612588 tagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaaccttggaaggagct 20612669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 28616389 - 28616486
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| |||| |||| ||||||||||||| |  ||| |||||||||||||||||||| ||||| ||| |||||||||| ||||||||||| ||||    
T  28616389 gtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacccgatatt 28616486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 9360767 - 9360879
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| ||||||||||||||||| ||  ||| ||||||||||||||||||||||||| ||||||| || ||   ||||||||| ||||||  |||| |||     
T  9360767 ccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattccccgggtacg 9360866  T
Q  217 tccttggaatgag 229  Q
    |||||||||||||    
T  9360867 tccttggaatgag 9360879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 15234111 - 15234194
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||  |||| ||| ||||||||| |||||    
T  15234111 gcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagct 15234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 39201509 - 39201615
Alignment:
Q  99 ttttcactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||  ||||| || ||||||||||||  |||||||||||  ||  |||||||||||||| |||||||||| | |||||||||||||||||||||      
T  39201509 ttttcaccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaatt 39201608  T
Q  199 cggtatt 205  Q
    |||||||    
T  39201609 cggtatt 39201615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 13026421 - 13026538
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| | |||||| ||||  ||||||||||  ||  ||||||||||||||||||||||||| | ||||||| ||||| ||||||||||| ||||      
T  13026421 gtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattcc 13026520  T
Q  208 ccggatacatccttggaa 225  Q
    | |||||| |||||||||    
T  13026521 ctggatacgtccttggaa 13026538  T

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Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 14169619 - 14169736
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||| | |||||||||||  ||  |||||||| |||||||||||| |||| ||||||||||| |||||||||||||| ||||      
T  14169619 gtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattcc 14169718  T
Q  208 ccggatacatccttggaa 225  Q
    ||| |||| |||||||||    
T  14169719 ccgaatacgtccttggaa 14169736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 21180346 - 21180447
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgag 229  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||| ||||||| || || |||||||| |||||||| | ||| ||| ||||||||| |||    
T  21180346 gcgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggag 21180445  T
Q  230 ct 231  Q
    ||    
T  21180446 ct 21180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 27726036 - 27725951
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatc 193  Q
    ||||| || ||||||  |||||||||||||||||  | | ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  27726036 gtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcctcctgagaatc 27725951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 16035016 - 16034916
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||| ||||||||||||  |||  |||| |||||||| |||||| ||||||||||||| ||||| ||||||||||||||||   ||||||| ||||||||    
T  16035016 ggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttgga 16034917  T
Q  225 a 225  Q
    |    
T  16034916 a 16034916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 18649045 - 18649153
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||| ||| ||||||||||||| ||  |||||||||||||||||||| ||||   ||||||| ||||||||||||| ||||||||  | | || ||    
T  18649045 ccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattccctgaatgca 18649144  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  18649145 tccttggaa 18649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 34356259 - 34356185
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||  || ||||| |||||||||    
T  34356259 tagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaa 34356185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 13514039 - 13513978
Alignment:
Q  170 caagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||| ||| |||||||  |||||||||||||||||||||||||||| |||||    
T  13514039 caagcgttgttccctctgtgaatcgagtccggtattttccggatacatccttggaaagagct 13513978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 16325691 - 16325602
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    ||||| || ||||||| ||||| ||||||||| |  ||  |||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  16325691 gtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 24179655 - 24179575
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||||||| ||| |||||||||||  ||  ||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  24179655 ccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgtt-cccctgagaatcgaacc 24179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 26805383 - 26805306
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcg 194  Q
    |||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||| ||| ||| | ||||| |||||    
T  26805383 ccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaaacgtcgtttctcctgaaaatcg 26805306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 29653713 - 29653625
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||||||||||| |||||||| ||  ||| |||||||||||||||||||| ||||||||||||  |||||  ||||||| |||||||||    
T  29653713 ccaccaaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtattt 29653625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 2528393 - 2528445
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  2528393 gtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggt 2528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 2149244 - 2149319
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac-ccggtattttccggatacatccttg 222  Q
    ||||||||||||||||||||||||| |||| ||||||| | ||||||||| ||||||||  || ||||||||||||    
T  2149244 gcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttg 2149319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 12864320 - 12864197
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| ||||||||| |  ||  ||| |||||||||||||||| ||||| |||||||||||||  ||||||| ||||||||      
T  12864320 gtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattcc 12864221  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||| || |||||| |||||    
T  12864220 ccgaatacgtcattggaaggagct 12864197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 14853381 - 14853491
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattc--gagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccgg 211  Q
    ||||||| |||| ||| |||||||||||| ||  |||   |||||||| ||||||||||||  |||||||||||||| ||||||| | ||||||  ||||    
T  14853381 gatccactaaagatggacgactaatccgactcatgagtagagaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccgg 14853480  T
Q  212 atacatccttg 222  Q
    |||||||||||    
T  14853481 atacatccttg 14853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 37804941 - 37805016
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgg 223  Q
    |||||| |||||||||||| |||||||||| ||||||||| |||||||| |||||||||  ||| ||| |||||||    
T  37804941 gcgtagcggcatgcgcactagccaagcgttattccccctgtgaatcgaatccggtatttctcgggtacgtccttgg 37805016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 29422310 - 29422188
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| |||||| ||||||||| |||||||||||  ||| ||||| ||| |||| || |||||||| ||||||||| |||  |||||||||| |||||  |    
T  29422310 tttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccc 29422211  T
Q  209 cggatacatccttggaatgagct 231  Q
    ||| ||| |||||| || |||||    
T  29422210 cgggtacgtccttgaaaggagct 29422188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 15079539 - 15079462
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||| ||||| |||||| ||||||||||||||||||  |||||||||| |||||  |||| ||| |||||||||    
T  15079539 gcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaa 15079462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 25604650 - 25604574
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||||||||||  ||||| ||| |||||||||||  || ||||||| ||||||||||||||||||||| ||||||    
T  25604650 gcgtagaggcatgcatactggtcaaacgttgttcccctgga-aatcgaatccggtattttccggatacatctttggaa 25604574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 25549818 - 25549727
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||| ||||| ||| |||||||||||  ||| ||||||||||||| ||||| |||||  ||||||  |||| |||||||||||| |||||    
T  25549818 gatccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtatt 25549727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 28525479 - 28525542
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccc 185  Q
    ||||||||  ||||||||||  ||| |||||||||||||||||||||||||| |||||| ||||    
T  28525479 aaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttcccc 28525542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 41187765 - 41187682
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||  |||||| |||| |||||||||||| | |||||||||||||||| | | ||||| ||||| ||| |||||    
T  41187765 gcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtccttagaaggagct 41187682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 43303345 - 43303399
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| ||||| ||||||||||||||| ||| ||||||||||| ||||    
T  43303345 tagaggcatgcgtactggtcaagcgttgttccccttgaaaatcgaacccgatatt 43303399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 5035370 - 5035277
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    ||||||||  || ||||||| |||| |||||||| |||||||||||| ||||| |||||    ||| |||||||||||  ||||||||||||||    
T  5035370 aaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaacccaatattttccggatac 5035277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 13104875 - 13104908
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttc 181  Q
    ||||||||||||||||||||||||||||||||||    
T  13104875 gcgtagaggcatgcgcactggccaagcgttgttc 13104908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 33005807 - 33005751
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||||||||||| |||||| |||||| |||  ||||||||||||    
T  33005807 gcgtagaggcatgcgcactggccaagtgttgtt-cccctgggaacagaacccggtatt 33005751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 41187923 - 41187822
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgag 229  Q
    ||||||||||||  ||  ||||||||||||||||||||| |||||||||||   ||| ||||| |||  |||||||   ||||||| ||||||||| |||    
T  41187923 gcgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggag 41187824  T
Q  230 ct 231  Q
    ||    
T  41187823 ct 41187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 31740777 - 31740868
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||| |||||| || || ||| || |||| |||| ||||||| |||||||||||   |||||| ||||||| | ||||||    
T  31740777 gatccaccaaaggtggacgactagtctgactcgtgcctagaagcattcgcactgaccaagcgttgtaatccctgataatcgaatctggtatt 31740868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 33634455 - 33634546
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||| |  ||||||| ||  ||| ||| || ||||||||||||||| || |||| || || ||| |||||||||||||||||    
T  33634455 gatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactggctaaacgttatttcctctgggaatcgaacccggtatt 33634546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 20116622 - 20116696
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    ||||| || ||| ||||||||| || ||||||||  ||  ||||||||||||||||| |||||| ||||||||||    
T  20116622 gtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcc 20116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 10106670 - 10106577
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    |||||||| |||||||||||| |   || |||| |||||||| ||   |||||||||||||  |||||||||||| |||||||||  |||||||    
T  10106670 aaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatac 10106577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 16813186 - 16813251
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    ||||||| ||| |||||||||||  ||| || |||||||||||| ||||| ||| |||||||||||    
T  16813186 accaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccc 16813251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 16852465 - 16852530
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    ||||||| ||| |||||||||||  ||| || |||||||||||| ||||| ||| |||||||||||    
T  16852465 accaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccc 16852530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 29421383 - 29421302
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    |||| ||||| |||| |||||| || | |||||| | ||| ||  |||||||||||||| ||||| ||||||||||||||||    
T  29421383 cactggtttccgatctaccaaatgtagacgactacttcgactcatgcgtagaggcatgctcactgcccaagcgttgttcccc 29421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 30721885 - 30721942
Alignment:
Q  128 gggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccc 185  Q
    ||||||||||||||| ||   ||||||| ||||||||||| ||||| |||||||||||    
T  30721885 gggcgactaatccgactcatacgtagagacatgcgcactgaccaagtgttgttccccc 30721942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 40968965 - 40969022
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| ||||||| |||| |||||||  |||||  ||||||||||||||||    
T  40968965 gcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtatt 40969022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 36262777 - 36262900
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||| |    
T  36262777 gtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt--ccctgggaatcgaacccggtattct 36262874  T
Q  208 ccggatacatccttggaatgagcttc 233  Q
    |||| ||| ||||||||| |||||||    
T  36262875 ccgggtacgtccttggaaggagcttc 36262900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 5472867 - 5472981
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||  ||||||||     
T  5472867 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacg 5472966  T
Q  217 tccttggaatgagct 231  Q
    |||||| ||||||||    
T  5472967 tccttgaaatgagct 5472981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 38166128 - 38166005
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||      
T  38166128 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattcc 38166029  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  38166028 ccggatacgtccttggaaggagct 38166005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 47078564 - 47078436
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||||||| |||| ||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  47078564 cactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggt 47078465  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  |||| ||| ||||||||| |||||    
T  47078464 attccccgggtacgtccttggaaggagct 47078436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 29895888 - 29895765
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||      
T  29895888 gtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcc 29895789  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  29895788 ccggatacgtccttggaaggagct 29895765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 3159479 - 3159596
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| |||| |||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| |    
T  3159479 gtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattct 3159578  T
Q  208 ccggatacatccttggaa 225  Q
    |||||||| |||||||||    
T  3159579 ccggatacgtccttggaa 3159596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 40780871 - 40780984
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| |||||||||||  ||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  40780871 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaacccgatatttt 40780970  T
Q  208 ccggatacatcctt 221  Q
    ||| |||| |||||    
T  40780971 ccgaatacgtcctt 40780984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 1940796 - 1940907
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||   ||||||||||||||||||| |||||||||||| ||||| |||| |||     
T  1940796 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacg 1940892  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  1940893 tccttggaaggagct 1940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 1446910 - 1446804
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    ||||| |||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| ||||||||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttgga 1446811  T
Q  225 atgagct 231  Q
    | |||||    
T  1446810 aggagct 1446804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 3507376 - 3507247
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||| |||||||||||||||| |||||||||||  ||| | ||||||||| ||||||| ||||||||||||| ||| || |||||||||||| |    
T  3507376 cactagtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgtt-cccttgggaatcgaacccgat 3507278  T
Q  203 attttccggatacatccttggaatgagcttc 233  Q
    ||| ||||||||||| |||| || |||||||    
T  3507277 attctccggatacattcttgaaaggagcttc 3507247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 7246656 - 7246773
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||      
T  7246656 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattcc 7246755  T
Q  208 ccggatacatccttggaa 225  Q
    |||| ||| |||||||||    
T  7246756 ccgggtacgtccttggaa 7246773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 20128410 - 20128293
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||| ||||| |||||||||    ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||      
T  20128410 gtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattcc 20128311  T
Q  208 ccggatacatccttggaa 225  Q
    |||||||| |||||||||    
T  20128310 ccggatacgtccttggaa 20128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 20532420 - 20532541
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| |||||||||||||||||||||| |||||  ||  ||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||| ||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctc 20532519  T
Q  209 cggatacatccttggaatgagc 230  Q
    ||| ||   |||||||||||||    
T  20532520 cgggtatggccttggaatgagc 20532541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 38075494 - 38075417
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||||||||    
T  38075494 gcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaa 38075417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 49260684 - 49260792
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||||||| || |||| |||  | |||||  |||||||||    
T  49260684 ccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggataca 49260783  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  49260784 tccttggaa 49260792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 41339417 - 41339528
Alignment:
Q  120 ccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcc 219  Q
    |||| |||||||||||||||||  ||| |||||||||||| | |||||||||||||||||||||| || || |||||||||||||| ||||| ||| |||    
T  41339417 ccaatggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtcc 41339516  T
Q  220 ttggaatgagct 231  Q
    |||||| |||||    
T  41339517 ttggaaggagct 41339528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 42722596 - 42722710
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| |||||||  |||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||| |||     
T  42722596 ccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcccgggtacg 42722695  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  42722696 tccttggaaggagct 42722710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 27248528 - 27248406
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||||||| | ||||||||||||||||||||| |  ||  ||||||||||||||||  ||||||||||||||||| |||| || ||||||||||||||     
T  27248528 agtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattc 27248431  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||||||| ||||||||| |||||    
T  27248430 cccggatacgtccttggaaggagct 27248406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 6779302 - 6779195
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||||||| |||||||||||  ||  || ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||| | ||| |    
T  6779302 caccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgt 6779203  T
Q  218 ccttggaa 225  Q
    ||||||||    
T  6779202 ccttggaa 6779195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 8889123 - 8889000
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| |||||||||||  ||  |||||||| ||||||||||| ||||| ||||||||||||  |||||||||||||||||      
T  8889123 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattcc 8889024  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||| ||| |||||    
T  8889023 ccggatacgtccttagaaggagct 8889000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 36145225 - 36145348
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| ||| || ||||||||| |||||||||||  ||  | ||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||      
T  36145225 gtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattcc 36145324  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| |||||||||||||||    
T  36145325 ccgggtacgtccttggaatgagct 36145348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 52950183 - 52950060
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| ||||||||| | |||  | |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||      
T  52950183 gtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattcc 52950084  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  52950083 ccaggtacgtccttggaaggagct 52950060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 53599161 - 53599038
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| ||||||| |||||||  ||| |||||||  ||  ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||      
T  53599161 gtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattcc 53599062  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  53599061 ccgggtacgtccttggaaggagct 53599038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 30317334 - 30317244
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||| || |||||||||||||||||||||| ||  ||| |||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  30317334 gtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacc 30317244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 15732458 - 15732575
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||||| || ||||||||||     || ||||||||||||| |||||||||||| |||||||||| |  ||||||||||||||||| |    
T  15732458 gtttccgatccaccaaagatgagcgactaatctagcccgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattct 15732557  T
Q  208 ccggatacatccttggaa 225  Q
    |||||||| |||||||||    
T  15732558 ccggatacgtccttggaa 15732575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 48015083 - 48015180
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| |||||| ||||  ||||| |||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  48015083 gtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtatt 48015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 232
Target Start/End: Complemental strand, 21429402 - 21429278
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| |||||| || || ||| |||||||||||||||||||||| || ||||||||||||| | ||||||||||| ||||      
T  21429402 gtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccgatattcc 21429303  T
Q  208 ccggatacatccttggaatgagctt 232  Q
     ||||||| || |||||| ||||||    
T  21429302 tcggatacgtctttggaaggagctt 21429278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 43458701 - 43458589
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| |||||||||||  |||  ||||||||||||||||||||||||||||| |||| |||| |||||||| || |||||  ||  |||| ||||    
T  43458701 caaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtcct 43458602  T
Q  221 tggaatgagcttc 233  Q
    |||||||||||||    
T  43458601 tggaatgagcttc 43458589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 3574466 - 3574553
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||| |||| |||| |||||||    
T  3574466 cacctaaggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtatt 3574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 24166551 - 24166428
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||| |||||||||| |||||||| |  ||| ||||||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||      
T  24166551 gtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattcc 24166452  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||  ||| ||||||||| |||||    
T  24166451 ccgagtacgtccttggaaggagct 24166428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 40272381 - 40272464
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||  ||||||||||| |||||| |||||    
T  40272381 gcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagct 40272464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 55921135 - 55921012
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| |||| |||||||  ||   ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||      
T  55921135 gtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattcc 55921036  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| | | ||||||||| |||||    
T  55921035 ccgggtgcgtccttggaaggagct 55921012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 29588812 - 29588714
Alignment:
Q  133 actaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||  ||| ||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||| ||||  || || ||||||||||||    
T  29588812 actaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagct 29588714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 48317302 - 48317408
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||||||||||||||||  ||| |||||||||||| | ||||| |||||||||||||| ||||| ||||||| || ||||||| || |||| || |||||    
T  48317302 ggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatttttcgaatacgtcattgga 48317401  T
Q  225 atgagct 231  Q
    |||||||    
T  48317402 atgagct 48317408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 14858811 - 14858695
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||| ||||||||| ||| ||||| || |||  ||||||| |||||||||||| ||||| ||| |||||||| ||| ||||||||||||| |    
T  14858811 gtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagc-ttgatccccctgggaaccgaacccggtattct 14858713  T
Q  208 ccggatacatccttggaa 225  Q
    |||| |||||||||||||    
T  14858712 ccgggtacatccttggaa 14858695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 16645219 - 16645122
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || |||||| |||||||||||||||| || ||  | |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||    
T  16645219 gtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaacccggtatt 16645122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 14124108 - 14124020
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||| |||| ||||||||||||  ||| | |||||||||||||||||||||||  ||||||||||||| |||||||||| ||||||    
T  14124108 ccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtatt 14124020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 16450390 - 16450310
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    ||||||||||| ||||||||| |  ||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16450390 accaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 43468431 - 43468351
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||  ||  ||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  43468431 ggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtatt 43468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 55005335 - 55005439
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaat 226  Q
    |||||||||||||||| | | ||||||||||||||||| ||| ||||||||||| |||||| ||||||||  |||||||| || ||||| || ||||||     
T  55005335 tgggcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaag 55005434  T
Q  227 gagct 231  Q
    |||||    
T  55005435 gagct 55005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 2559408 - 2559285
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| ||| |||||||  | | ||||||||||||||||||||||||||||||||||| |||   ||||||| ||||||||      
T  2559408 gtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattcc 2559309  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  2559308 ccaggtacgtccttggaaggagct 2559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 33647822 - 33647699
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||||| ||  ||||||||| | |||| ||||||||| ||| ||||||| |||||||||||| |||||  ||||||||||||||||      
T  33647822 gtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattcc 33647723  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || ||||| |||||| || |||||    
T  33647722 ccagatacgtccttgaaaggagct 33647699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 17080138 - 17080068
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    |||||| |||||||| ||||||||||||  ||  |||||||||||||||||||||||||||||||||||||    
T  17080138 gatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 41162893 - 41163015
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| |||||| |||||||||||||||||| ||  ||  || |||| |||||  ||||||||||| ||||||||| |||  |||||||| |||||||| |    
T  41162893 tttccgatccatcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcc 41162992  T
Q  209 cggatacatccttggaatgagct 231  Q
    ||||||| ||||||||| |||||    
T  41162993 cggatacgtccttggaaggagct 41163015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 295552 - 295655
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||| ||||||||| | |||| ||||||||||||||||||||||||| ||||||| || ||| |||||||| | ||||||  ||||||||     
T  295552 ccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgtt-cctctgggaatcgaatctggtattccccggatacg 295650  T
Q  217 tcctt 221  Q
    |||||    
T  295651 tcctt 295655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 7742016 - 7741929
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| ||| ||||||||| |  ||| ||||||||||||| ||||||||||||||||||| ||||||||| | ||||||| ||||    
T  7742016 caccaaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaacccgatatt 7741929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 13073639 - 13073516
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||   ||||||||| | |||  ||||||||| ||||||||||||||| | ||||||||| || ||||||||| ||||||| |    
T  13073639 gtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcggtattct 13073540  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  13073539 ccaggtacgtccttggaaggagct 13073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 14568038 - 14567963
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||| ||| ||||||||| ||| ||||||| |||||||| ||| |||||||||||||||| ||||||    
T  14568038 gcgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtatt 14567963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 24850677 - 24850759
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||| |||| |||||| ||||||| ||| ||| | ||||||| |||||||| |||||||||||||||    
T  24850677 gcgtagaggcatgcgcactggtcaagtgttgtt-cccctgataattgaatctggtatttcccggatacgtccttggaatgagct 24850759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 10541116 - 10541020
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| |||||| ||||||||| ||| ||||| |  ||| |||||||||||||| |||||||||||||||||| ||||||  ||||||||||| ||||    
T  10541116 gtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatatt 10541020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 20354720 - 20354639
Alignment:
Q  126 gtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||| |||||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||  |||| ||| |||||||||    
T  20354720 gtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttt 20354639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 21192731 - 21192667
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    ||||||| |||||||| |||||||| ||| ||||||||||||||||||||||| | |||||||||    
T  21192731 caccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttcc 21192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 4736698 - 4736575
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| |||||||||||||| ||  | |  ||||||||||||| || ||||||| ||||||| || |||||||| ||||||||||||      
T  4736698 gtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaacccggtattcc 4736599  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||| |||||||||| || |||||    
T  4736598 tcgggtacatccttgaaaggagct 4736575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 14078047 - 14077924
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||||||||||| ||| ||||| ||||||||||| ||| |||||||| ||||||||||| ||||| | |||| | |||| ||||  || | | ||||||    
T  14078047 gtttctgatccactaaatgtgggtgactaatccgactcgtgcgtagagacatgcgcactgaccaagtgatgtttctcctgtgaattaaatctgatatttt 14077948  T
Q  208 ccggatacatccttggaatgagct 231  Q
    | ||||||||| || ||| |||||    
T  14077947 ctggatacatctttagaaggagct 14077924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 14597916 - 14597974
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    |||||| ||||||||| ||||||||||  |||| |||||||||||||||||||||||||    
T  14597916 gatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 14597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 15829800 - 15829686
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||||||||||| |||||  ||||||||||  ||  || |||| |||||||||||||||||| |||| | ||||||| |||| |||  | |||| |    
T  15829800 gtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatcaaactggatattct 15829701  T
Q  208 ccggatacatccttg 222  Q
    |||||||| ||||||    
T  15829700 ccggatacgtccttg 15829686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 20421834 - 20421784
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  20421834 gcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 20421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 35359819 - 35359749
Alignment:
Q  126 gtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||||||||||||| | |   |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  35359819 gtgggcgactaatccaacttatgcgttgaggcatgcgcactggtcaaacgttgttccccctgagaatcgaa 35359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 38168348 - 38168235
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| |||||||  |||||||||||  ||  ||||||||||||| ||||||||||||||||||||| | |  |||||||||| ||||||  |||| |||     
T  38168348 ccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaacctggtattccccgggtacg 38168250  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  38168249 tccttggaaggagct 38168235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 47682392 - 47682476
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatc 193  Q
    ||||| || ||||||||||||||||||||| |||  ||| |||||||| |||| ||||||||||| |||| || ||||||||||||    
T  47682392 gtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttatt-cccctgagaatc 47682476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 8064825 - 8064905
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| |||||||||||  ||  ||||||||||||||||||||| |||| ||| |||||| || ||||||||||| |||||    
T  8064825 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtatt 8064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 14567331 - 14567276
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    |||||||||| | ||||||||||||  ||| |||||||||||||||||||||||||    
T  14567331 ccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 14567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 37369052 - 37369127
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    ||||| ||| ||||||  |||||||||| |||||| ||| |||||||||||||| |||||| ||| ||||||||||    
T  37369052 gtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgttgttccc 37369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 45721173 - 45721090
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| |||||||||||| | | ||||||||||| ||||| ||||||| | || || ||||||| ||| ||||||||||||    
T  45721173 aaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaacccggtatt 45721090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 4738719 - 4738629
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||| || ||||||||||||| |||||||| |   ||  |||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  4738719 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcctggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 31588787 - 31588694
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggcca--agcgttgttccccctgagaatcgaaccc 199  Q
    ||||| ||||||||||| ||| ||||||||||||  ||  |||||||| |||||||||||||||  ||||||||| || ||| ||||| |||||    
T  31588787 gtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaaccc 31588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42722406 - 42722511
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    ||||| |||||||||||| ||  || |||||| ||||||||||| |||| |||||| |||||| ||||| |||||||||||  |||| |||||| ||| |    
T  42722406 ggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgtt-cccctgggaatcaaacccggtattccccgggtacatctttgaa 42722504  T
Q  225 atgagct 231  Q
    | |||||    
T  42722505 aggagct 42722511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 26479999 - 26480056
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||| |||||||||| ||| |||||| | |||||||||| |||||||    
T  26479999 gcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtatt 26480056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 50486044 - 50485971
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttc 181  Q
    ||||| || |||| || |||||||||||||||||  ||| |||||||||||||||  |||||||| ||||||||    
T  50486044 gtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttc 50485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 33109425 - 33109298
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggcca--agcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| ||  | ||||| |||||||||  ||| |||||||| |||||| ||||||||  ||||||||||  | || |||| ||||||| |||     
T  33109425 gtttctgatccatcattgatgggcaactaatccggctcgtgcgtagagacatgcgtactggccaagagcgttgttcttcatgggaattgaacccgatatc 33109326  T
Q  206 ttccggatacatccttggaatgagcttc 233  Q
      |||||||| ||||||||| |||||||    
T  33109325 ccccggatacctccttggaaggagcttc 33109298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 18531620 - 18531541
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctg 187  Q
    ||||| || |||| |||||||| ||| ||||| | |||| || | ||||||||||||||| ||||| |||||||||||||    
T  18531620 gtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttccccctg 18531541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 9548813 - 9548723
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    |||||| |||||||||| ||||  |||||||||   |||| | | |||||||||||||||  ||||||||||||| |  ||||||||||||    
T  9548813 agtttccgatccaccaacggtgaacgactaatctagttcgtgtgcagaggcatgcgcactaaccaagcgttgttctcattgagaatcgaac 9548723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 13436858 - 13436816
Alignment:
Q  163 cactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||    
T  13436858 cactgaccaagcgttgttccctctgggaatcgaacccggtatt 13436816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 24478994 - 24479092
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||| |||||||||| ||||||||| |||||||  ||| | |||||||| || | | ||| ||||||||||| ||||| | ||| |||| ||||||||    
T  24478994 gtttccgatccaccaacggtgggcgattaatccggctcgtgtgtagaggcgtgtgtaatggtcaagcgttgtttcccctaaaaattgaactcggtattt 24479092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 48834710 - 48834811
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||| |||||||||||||| ||  |  |||||||||| ||||||||| ||  || || ||||||  |||||||||||||||| |    
T  48834710 gtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatgtgcactggcctagtattatt-cccctggaaatcgaacccggtattct 48834808  T
Q  208 ccg 210  Q
    |||    
T  48834809 ccg 48834811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 6032653 - 6032773
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||| | |||||||||||  ||   |||||||||||| ||||||| |||||   || || ||||| ||| ||||||||||||      
T  6032653 gtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagc---gtacctcctgaaaattgaacccggtattcc 6032749  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  6032750 ccgggtacgtccttggaaggagct 6032773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 7000613 - 7000500
Alignment:
Q  115 atccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggata 214  Q
    ||||||||||| || |||||||||| |  ||| |||||||||||    || ||||||||||||||||  |||| ||||||||| |||||||  |||  ||    
T  7000613 atccaccaaag-tgagcgactaatctggctcgtgcgtagaggca----cattggccaagcgttgttcttcctgggaatcgaactcggtattccccgagta 7000519  T
Q  215 catccttggaatgagcttc 233  Q
    | ||||||||| |||||||    
T  7000518 cgtccttggaaggagcttc 7000500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 15839965 - 15840014
Alignment:
Q  128 gggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgtt 177  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||| ||||    
T  15839965 gggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgtt 15840014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 13552148 - 13552092
Alignment:
Q  175 gttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||||||||||| ||||  |||||||| | ||||||| |||||    
T  13552148 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagct 13552092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 26237431 - 26237523
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||||| || ||| ||| ||||| | |||||||||| ||  ||||| || ||| |||||||  ||| ||||||| ||||||||||||||||||    
T  26237431 agtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcgaaccc 26237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 1606040 - 1605917
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| ||||||||||||||||||||||||||||  || ||| |||||||||| ||||||||||||||||||||||||||  ||||||||| |||||| |    
T  1606040 gtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaaccaggtattct 1605941  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  1605940 ccgggtacgtccttggaaggagct 1605917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 34659315 - 34659202
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||| |||||    
T  34659315 caccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacat 34659216  T
Q  218 ccttggaatgagct 231  Q
    || ||||| |||||    
T  34659215 ccctggaaggagct 34659202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 38578877 - 38578994
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||      
T  38578877 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattcc 38578976  T
Q  208 ccggatacatccttggaa 225  Q
    |||| ||| |||||||||    
T  38578977 ccgggtacgtccttggaa 38578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 22993377 - 22993500
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||  |||||||||||| ||||      
T  22993377 gtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatattcc 22993476  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  22993477 ccgggtacgtccttggaaggagct 22993500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 17748392 - 17748509
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||||||||| |||||||||||  |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  17748392 gtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 17748491  T
Q  208 ccggatacatccttggaa 225  Q
    ||| |||| |||||||||    
T  17748492 ccgaatacgtccttggaa 17748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 22974066 - 22973943
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||| ||||||||| |  ||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||      
T  22974066 gtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattcc 22973967  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||  ||| ||||||||| |||||    
T  22973966 ccgagtacgtccttggaaggagct 22973943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 48804782 - 48804659
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||||||  ||  |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||      
T  48804782 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattcc 48804683  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  48804682 ccggatacgtccttggaaggagct 48804659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 13095957 - 13095834
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| ||||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||      
T  13095957 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattcc 13095858  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| |||||| || |||||    
T  13095857 ccgggtacgtccttgaaaggagct 13095834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 1797553 - 1797436
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||| ||||| ||| |||||| ||||  ||| |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||   |||||    
T  1797553 gatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggat 1797454  T
Q  214 acatccttggaatgagct 231  Q
    || ||||||||| |||||    
T  1797453 acgtccttggaaggagct 1797436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 18785768 - 18785643
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||| |||||  ||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||      
T  18785768 gtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattcc 18785669  T
Q  208 ccggatacatccttggaatgagcttc 233  Q
    |||| ||| ||||||||| |||||||    
T  18785668 ccgggtacgtccttggaaggagcttc 18785643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 43861988 - 43862105
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||||||||||||   ||||||||||  ||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||  || |||    
T  43861988 gatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagat 43862087  T
Q  214 acatccttggaatgagct 231  Q
    || || |||||| |||||    
T  43862088 acgtctttggaaagagct 43862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 10047926 - 10048009
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| ||||||||| |||||    
T  10047926 gcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagct 10048009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 47341935 - 47341852
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||  |||| ||| |||||||||||||||    
T  47341935 gcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagct 47341852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 16802213 - 16802099
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| |||| ||||||||||||  ||| |||||||||||| |||||||||||| ||||||||| ||| ||||||||| ||||||||  |||| |||     
T  16802213 ccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacg 16802114  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  16802113 tccttggaaggagct 16802099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 5069825 - 5069938
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  | | |||||||||||||| |||| || |||||||||||| ||||  |||||||||||||||||     
T  5069825 gtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtatttc 5069924  T
Q  208 ccggatacatcctt 221  Q
    |||| ||| |||||    
T  5069925 ccgggtacgtcctt 5069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 21190809 - 21190913
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaat 226  Q
    ||||||||||||| || ||| ||||||||||||||||||| ||||||||||| ||| |||  |||||||||||||||||  |||||||  |||||||||     
T  21190809 tgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattccccggataagtccttggaag 21190908  T
Q  227 gagct 231  Q
    |||||    
T  21190909 gagct 21190913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 43346784 - 43346912
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||||||||| || ||||||||||||  |||  ||||||||||||||||| ||||||| |||||||||| ||||||| |||||||||    
T  43346784 cactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggt 43346883  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  || ||||| || |||||| |||||    
T  43346884 attccccagatacgtctttggaaggagct 43346912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 49142692 - 49142776
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||| |||||||||  ||| ||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||||    
T  49142692 caaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtatt 49142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 27028378 - 27028255
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| |||||||||||   ||  | |||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||     
T  27028378 gtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttc 27028279  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| | |||||||||||||    
T  27028278 ccaggtacgttcttggaatgagct 27028255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 43925571 - 43925488
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||  |||| ||| ||||||||| |||||    
T  43925571 gcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagct 43925488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 36619259 - 36619361
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| |||| ||| ||||||| ||||| |||||||||||  ||  |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||    
T  36619259 cactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggt 36619358  T
Q  203 att 205  Q
    |||    
T  36619359 att 36619361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 3353523 - 3353427
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| ||||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||||  ||||||||||||| |||| ||||    
T  3353523 gtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtt-tccctgagaatcgatcccgatatt 3353427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 23658278 - 23658189
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    |||||||| ||||||||| ||| |||||||||||  ||| | |||||||||||| |||||||||||||||||||||||||  ||||||||    
T  23658278 gtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaac 23658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 26423306 - 26423394
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||  ||||||||| |  ||| ||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||    
T  26423306 ccaccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtatt 26423394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 28396170 - 28396277
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||| | |||||||||||  ||  ||||| ||||||||||||  || |||||||||||||||||||||| ||||||| |||||     
T  28396170 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaacccgatatttc 28396269  T
Q  208 ccggatac 215  Q
    ||||||||    
T  28396270 ccggatac 28396277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 42210272 - 42210395
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| |||||| || |||||||  ||| ||||||||||||||||||||||||| |||||||  | ||| |||||||| ||||||||      
T  42210272 gtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcc 42210371  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||||||| ||||||||| |||||    
T  42210372 tcggatacgtccttggaaagagct 42210395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 14535391 - 14535293
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||| ||| ||| ||||||||||||||||   ||| |||||||||||||| ||||||||||| ||||||| |||||| |||  |||||||||||    
T  14535391 agtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtatt 14535293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 41945562 - 41945497
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    |||||||||||| |||||||||||  ||| |||||||||||||||||||||||||||||| |||||    
T  41945562 caccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccc 41945497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 27875107 - 27875195
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| |||||||| |||||||| ||| ||  ||||||||||||| |||||||||||| ||| ||||||||| |||||||| ||||||||    
T  27875107 ccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtatt 27875195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 30827378 - 30827294
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||| | |||||||||||  ||| ||||||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||||    
T  30827378 caaaggtagacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtatt 30827294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 21530847 - 21530724
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| |||| |||| ||  ||| ||||||||||||| |||||| ||||| ||||||||||||| ||||| ||||| |||||      
T  21530847 gtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattcc 21530748  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  21530747 ccaggtacgtccttggaaggagct 21530724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 39475030 - 39474943
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtat 204  Q
    |||| |||||||| |||||||||||  ||  ||||||||| |||||||||| |||||||||||||||| |  ||||||||||||||||    
T  39475030 ccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaacccggtat 39474943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 45448069 - 45447946
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| ||||||||| |||||||| || | | | ||||||| ||||||||| |||||||||||||| |||||  ||||||||| |||||||     
T  45448069 gtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatttc 45447970  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||| ||| ||||||||| |||||    
T  45447969 tcgggtacgtccttggaaggagct 45447946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 14650407 - 14650293
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||| |||||||| |||  ||  ||||||||||||  ||||||| ||||| ||||||| ||||  ||||||||||| |||| ||||| |||     
T  14650407 ccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgggtacg 14650308  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  14650307 tccttggaaggagct 14650293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 5039434 - 5039551
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    ||||||||||||||| ||||||||||||  ||  ||||||||| ||| |||||| ||||| |||||||| |||  ||||||||| |||||||  ||| ||    
T  5039434 gatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccgaat 5039533  T
Q  214 acatccttggaatgagct 231  Q
    |||||  ||||| |||||    
T  5039534 acatctatggaaggagct 5039551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 8734696 - 8734773
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccc 185  Q
    ||||| || ||||||||||||||||||||||| |  ||| |||| ||||||||||||||| |||||| ||||||||||    
T  8734696 gtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttccccc 8734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 10317756 - 10317852
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||||||||||| |||||||||| | ||   || ||||||||| ||||||| ||||| ||| ||||||||| |||||||||||||||||    
T  10317756 gtttccgatccaccaaaggtgagcgactaatctgcttat-gcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaacccggtatt 10317852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 24969336 - 24969448
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||||| || |||| |||||||| | |  |||||||||| |||||||||||||| ||||||  |||||  ||||||||||||||||||    
T  24969336 gtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgtt--ccctggaaatcgaacccggtatttt 24969433  T
Q  208 ccggatacatccttg 222  Q
    || ||||| ||||||    
T  24969434 ccagatacgtccttg 24969448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 45960013 - 45960135
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||| |||||||| ||||||||||||  |   |||||||||||||||||||| ||||| |||||| ||| || ||||| ||| ||||| ||     
T  45960013 gtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggta-ttc 45960111  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || ||||| ||||||||| |||||    
T  45960112 cccgatacgtccttggaaagagct 45960135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 4195221 - 4195327
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||| || ||||||||  ||  ||||||||||||||||||| |||||  |||||||| ||||  |||||||| |||||||  ||||||||     
T  4195221 ccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacg 4195320  T
Q  217 tccttgg 223  Q
    |||||||    
T  4195321 tccttgg 4195327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 22268088 - 22268162
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||  ||   ||| |||||||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagct 22268162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 365199 - 365142
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||||||||   |||||||||||| |||| |||||||||||||||||    
T  365199 gcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtatt 365142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 42032155 - 42032070
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagcttc 233  Q
    ||||||| | ||| ||||||||||| ||||||||||| || |||||||||| ||||||  |||| ||| ||||||||| |||||||    
T  42032155 gcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttc 42032070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 20247197 - 20247304
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    ||||| ||||||||||||  ||  ||||||| |||| | |||| |||||||||||||||| ||||||||||||| ||||||  |  | ||||||||||||    
T  20247197 ggtggacgactaatccgacccgtacgtagagacatgtgtactgcccaagcgttgttccccatgagaatcgaacctggtattcccaag-tacatccttgga 20247295  T
Q  225 atgagcttc 233  Q
    | |||||||    
T  20247296 aggagcttc 20247304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 37514993 - 37514897
Alignment:
Q  135 taatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||  ||| |||||||| ||||||||||| |||| |||||||||| |||| |||||||||| |||||  |||| ||  ||||||||| |||||    
T  37514993 taatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacccagtattccccgggtatgtccttggaaggagct 37514897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 45697200 - 45697287
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||| || ||||||||||||| ||||||| || | ||  ||||||||||||||||||||  |||| |||||| |||||||||||||||    
T  45697200 gtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgtt-cccctgagaatcgaa 45697287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 3603447 - 3603355
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactg----gccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| |||  ||| |||||||  ||| ||||||||||||||||||||    ||||| ||||||||||||  ||||||||||||||||||    
T  3603447 ccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactgaccggccaaacgttgttcccccaaagaatcgaacccggtatt 3603355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 28744262 - 28744183
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccct 186  Q
    |||||| || ||||||||||||| |||||||||||  |||   ||||||| ||||| ||||||||||| |||||||||||    
T  28744262 agtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttccccct 28744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 29151997 - 29151942
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||||||| ||| ||||||||  |||| |||||||||||||||||    
T  29151997 gtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtatt 29151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 32823320 - 32823253
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    ||||||||||||  ||| |||||||||||| | ||| ||||||| ||||||||||||| |||||||||    
T  32823320 gcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 39420923 - 39420861
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    ||||||| | |||||||||||  ||  ||||||||||| ||||||||||||||||||||||||    
T  39420923 caaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccc 39420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 48551956 - 48551878
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccct 186  Q
    ||||| |||||| ||||||||| |||||||||||  ||   |||||||||||||||| ||||||| |||||||| ||||    
T  48551956 gtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttcaccct 48551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 4706000 - 4706117
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||| ||||||||||| ||||||||||   ||| ||||||| ||||||| | |||| || ||||||||||||| | |||||||||  |||||| |  |||    
T  4706000 gatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttccccctaaaaatcgaaccatgtatttcctagat 4706099  T
Q  214 acatccttggaatgagct 231  Q
    || || |||||| |||||    
T  4706100 acgtcattggaaggagct 4706117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 19914726 - 19914787
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    ||||||||||||| ||||| |  ||  ||||||||||||||||| |||||||||||||||||    
T  19914726 caaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcc 19914787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 46414734 - 46414685
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    ||||||||||||||||| |||||||||||| |||  ||||||||||||||    
T  46414734 gcgtagaggcatgcgcattggccaagcgttattcatcctgagaatcgaac 46414685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 4228781 - 4228884
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||||||||||||||||  ||  |||||| |||||| ||||||||||| |||||||   ||||  ||||||||| ||||||   ||||||| ||||||||    
T  4228781 ggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt---cctggaaatcgaacctggtattcctcggatacgtccttgga 4228877  T
Q  225 atgagct 231  Q
    | |||||    
T  4228878 aggagct 4228884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 25197150 - 25197230
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccgg 211  Q
    |||||||||||| | | | |||||| ||||||||| || ||||||||||||||  | ||||||||| | ||||||||||||    
T  25197150 cgactaatccgacttgtgtgtagagacatgcgcaccggtcaagcgttgttccctttaagaatcgaatcaggtattttccgg 25197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 32769036 - 32768984
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatg 160  Q
    ||||| |||||||||||||||  |||||||||||| ||| |||||||||||||    
T  32769036 gtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 4973130 - 4973217
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| ||| |||||||||||  |||  |||||||||||||||| ||| |||| ||| |||||| |  |||||||||||| ||||    
T  4973130 caccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatatt 4973217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 48244372 - 48244463
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||| ||||||||||||  ||  |||||||||||  |||||||  ||||| ||||||||| |   ||| ||||||||||||    
T  48244372 gatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaacccggtatt 48244463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 9685771 - 9685715
Alignment:
Q  175 gttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||||||||||| ||||  |||||||| | ||||||| |||||    
T  9685771 gttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagct 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 38988990 - 38988934
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaag 173  Q
    ||||||||| || |||||||||||| |||  ||||||||||||| |||||| |||||    
T  38988990 ccaccaaagatgagcgactaatccggttcatgcgtagaggcatgtgcactgaccaag 38988934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 12769 - 12644
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||      
T  12769 gtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattcc 12670  T
Q  208 ccggatacatccttggaatgagcttc 233  Q
    ||||  || ||||||||| |||||||    
T  12669 ccgggcacgtccttggaaggagcttc 12644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 43033001 - 43032892
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||     
T  43033001 gtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttc 43032902  T
Q  208 ccggatacat 217  Q
    || |||||||    
T  43032901 ccagatacat 43032892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 18374101 - 18373987
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||| ||| |||||||||||  ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||| |    
T  18374101 ccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatata 18374002  T
Q  217 tccttggaatgagct 231  Q
    || ||||||||||||    
T  18374001 tctttggaatgagct 18373987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 17981531 - 17981418
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||| ||||| |||||| ||| ||| |||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||| |||| |||||    
T  17981531 caccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacat 17981432  T
Q  218 ccttggaatgagct 231  Q
    |||||||| |||||    
T  17981431 ccttggaaggagct 17981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 14666090 - 14666204
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||  |||||||||||||| |  | | |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||  ||||||||     
T  14666090 ccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacg 14666189  T
Q  217 tccttggaatgagct 231  Q
    |||||||||||||||    
T  14666190 tccttggaatgagct 14666204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 33401814 - 33401906
Alignment:
Q  113 tgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| ||||||||||||||||||||| ||  |||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||    
T  33401814 tgatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtatt 33401906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 2964176 - 2964053
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||| | |  ||||||||| |||||||      
T  2964176 gtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaacacggtattcc 2964077  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| | ||||||| |||||    
T  2964076 ccgggtacgttcttggaaggagct 2964053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 15884566 - 15884688
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||      
T  15884566 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgtt-cccctgggaatcgaacccggtattcc 15884664  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  15884665 ccaggtacgtccttggaaggagct 15884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 13359093 - 13358999
Alignment:
Q  137 atccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||| ||| ||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| |||||    
T  13359093 atccgactcgtgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattttccggacacatctttggaaggagct 13358999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 583912 - 583816
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| ||||| |||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||  ||||  ||||||||||||||||||    
T  583912 gtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcgaacccggtattt 583816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 6100563 - 6100449
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| |||||||  |||||||||||  ||  |||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||     
T  6100563 ccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacg 6100464  T
Q  217 tccttggaatgagct 231  Q
    |||||| || |||||    
T  6100463 tccttgaaaggagct 6100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 1013027 - 1013104
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||    
T  1013027 gcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaa 1013104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8141202 - 8141085
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||| |||| |||||||| |   ||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||      
T  8141202 gtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattcc 8141103  T
Q  208 ccggatacatccttggaa 225  Q
    ||| |||| |||||||||    
T  8141102 ccgaatacgtccttggaa 8141085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 9860005 - 9860129
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt-t 206  Q
    ||||| |||||||||| ||||| ||||||||| |  ||  | |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||      
T  9860005 gtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcc 9860104  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||||||| ||||||||| |||||    
T  9860105 cccggatacgtccttggaaggagct 9860129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 24837343 - 24837219
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| |||||||||||||||| ||||||||||   ||| || ||||||||||  ||||||||||||||||||| ||||| ||||||||| |||||||     
T  24837343 agtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattc 24837244  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||| ||| | ||||||| |||||    
T  24837243 cccgggtacgtacttggaaggagct 24837219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 45521268 - 45521149
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| |||||||| ||||||||||||  ||  ||||||||||||||||||||  |||| |||||| |||||| |||||||||||||||||      
T  45521268 gtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgtt-cccctgggaatcgaacccggtattcc 45521170  T
Q  208 ccggatacatccttggaatga 228  Q
    |||| ||||||||||||||||    
T  45521169 ccgggtacatccttggaatga 45521149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 3418523 - 3418646
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||| |||||||| ||||||||| || ||  ||||||| |||||||||||||||||| |||||||| ||| | ||||||||||| ||||      
T  3418523 gtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattcc 3418622  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || ||||| ||||||||| |||||    
T  3418623 ccagatacgtccttggaaggagct 3418646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 38922464 - 38922547
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||| ||| ||||||||| |||||    
T  38922464 gcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagct 38922547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 10927706 - 10927592
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| |||||||  |||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||      
T  10927706 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattcc 10927607  T
Q  208 ccggatacatccttg 222  Q
    |||| ||| ||||||    
T  10927606 ccgggtacgtccttg 10927592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 2467146 - 2467251
Alignment:
Q  126 gtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||| |||||||||||  ||  || ||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||  |||||||| |||||||||    
T  2467146 gtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaa 2467245  T
Q  226 tgagct 231  Q
     |||||    
T  2467246 ggagct 2467251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 4479306 - 4479402
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||||||| ||||||||||   ||  ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  4479306 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgtt-cccctgggaatcgaatccggtatt 4479402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 6042917 - 6042824
Alignment:
Q  112 ctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| ||||||  |||||||||||||||||  ||  ||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  6042917 ctgacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtatt 6042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 6940608 - 6940535
Alignment:
Q  158 atgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||| |||||||||||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagct 6940535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 13085605 - 13085501
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaat 226  Q
    ||||||| ||||| |  ||| ||||||||| |||| ||||||| || |||||||||| |||||||||||||||||||||  |||||||| |||||||||     
T  13085605 tgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaag 13085506  T
Q  227 gagct 231  Q
    |||||    
T  13085505 gagct 13085501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 14846666 - 14846551
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| ||||| ||| || ||  |||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||  |||| |||     
T  14846666 ccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgtt-cccctgagaatcgaacccggtattccccgggtacg 14846568  T
Q  217 tccttggaatgagcttc 233  Q
    ||||| ||| |||||||    
T  14846567 tccttagaaggagcttc 14846551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 16894027 - 16893920
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||| ||||||  ||  ||||| ||||||| | |||||||||||||| ||||||||| |||||||||||| ||||  ||||||||     
T  16894027 ccaccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaacccgatattccccggatacg 16893929  T
Q  217 tccttggaa 225  Q
    || ||||||    
T  16893928 tcattggaa 16893920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 26571011 - 26570911
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| |||||||||||  ||  ||||||| |||| | ||||||||||||||||||||||||  |||| ||||||| ||||| || ||||||||||    
T  26571011 caaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatatttcccagatacatcct 26570912  T
Q  221 t 221  Q
    |    
T  26570911 t 26570911  T

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Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 34846873 - 34846791
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||  |||||||||||||||||| || || ||||||||||||||| || |||| ||| |||||||||||||||    
T  34846873 gcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggta-ttcccgggtacgtccttggaatgagct 34846791  T

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Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 44031464 - 44031567
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgc-----gcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcctt 221  Q
    |||||||||||||||  ||| ||| ||||||||||      |||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||    
T  44031464 tgggcgactaatccggctcgtgcgcagaggcatgcacactacactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatcctt 44031563  T
Q  222 ggaa 225  Q
    ||||    
T  44031564 ggaa 44031567  T

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Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 44893288 - 44893411
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||| |||| |||| |||||||  ||| |||||||||||||| |||||||||||| |||||||||||   ||| ||||||||||||      
T  44893288 gtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattcc 44893387  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  44893388 ccgggtacgtccttggaaggagct 44893411  T

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Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 33935761 - 33935842
Alignment:
Q  124 aggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||||||||| ||  ||||| |||||||||||||||||||| ||||||| ||||  |||||||| ||||||||    
T  33935761 aggtgagcgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtatt 33935842  T

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Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 34710586 - 34710694
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| | ||| |||||| ||||| | | | ||| ||||||||||||| |||||| |||||| |||||| |||||||| |||||||||||||  |||     
T  34710586 ccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggtattttccgagtacg 34710685  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  34710686 tccttggaa 34710694  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 16291222 - 16291303
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||||||| |||||||||||   ||  || |||||||||| | |||||||||| |||||||||||||| |||||||||    
T  16291222 ccaccaaaggtgagcgactaatccagctcatgcatagaggcatgtgtactggccaagtgttgttccccctgaaaatcgaacc 16291303  T

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Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 43027405 - 43027308
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||| ||||| ||| |||||||||||  ||  ||||||||||||||||| ||| ||| ||||||||| |||| ||||||||||| |||||    
T  43027405 gtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtatt 43027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 8586989 - 8587033
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaat 192  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  8586989 gcgtagaggtatgcgcactggccaagcgttgttccccctgggaat 8587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 11785975 - 11785893
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||| ||||| |||| ||||| ||||| || |||||||| ||||||||  |||| ||| |||||||||||||||    
T  11785975 gcgtagaggcatgcacactgcccaaacgttgctccccttg-gaatcgaatccggtattccccgggtacgtccttggaatgagct 11785893  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 27975987 - 27975900
Alignment:
Q  112 ctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||| |||| |||||||||||| |||||||  || ||||||||||||||| |||||  |||| ||||||||  ||| |||||||||||    
T  27975987 ctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 27975900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 28033256 - 28033169
Alignment:
Q  112 ctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||| |||| |||||||||||| |||||||  || ||||||||||||||| |||||  |||| ||||||||  ||| |||||||||||    
T  28033256 ctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 28033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 22810130 - 22810057
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||| |||||||||||| |||| | |||||||||||| | || ||||||||| ||||||||| |||||    
T  22810130 catgcgcactgaccaagcgttgtt-ccccagggaatcgaacccgatgttctccggatacgtccttggaaggagct 22810057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 23895668 - 23895578
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||| || ||| ||||||||| ||| ||||||   ||| ||||||||| |||||||||||||||||||||||| || |||| ||| ||||    
T  23895668 gtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttctccatgaggatccaacc 23895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 29933831 - 29933750
Alignment:
Q  149 cgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||  |||||| |||| ||||||| ||||| ||||||||||| ||||| ||||||||||| ||| ||| |||||    
T  29933831 cgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaaccc-gtattctccggatacattcttagaaggagct 29933750  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 13357966 - 13358047
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgag 189  Q
    ||||| || |||| ||||| || |||||||||||  ||| || ||||||||||| || ||||||| ||||||||||||||||    
T  13357966 gtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttccccctgag 13358047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 18091485 - 18091428
Alignment:
Q  123 aaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    |||||||||||||||| ||  ||| ||||||||||||||||||||| ||| |||||||    
T  18091485 aaggtgggcgactaattcgcctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 18091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 36662504 - 36662408
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||  ||| |||| ||||||||||| |||   ||||||||||||||||||||| |||  ||||| ||||||| ||||||||||| ||||    
T  36662504 gtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgtt-cccctgaaaatcgaacccgatatt 36662408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 68108 - 68200
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    ||||| || ||| ||||||||  ||| |||||||  ||| | ||| ||||||||  ||||||||| ||||||||| |||||||||||||||||    
T  68108 gtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaacccg 68200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 7673673 - 7673745
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccct 186  Q
    ||||||| |||| |||||||  ||||||  ||| |||||||||||||| |||| ||||| |||||||||||||    
T  7673673 gatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgttccccct 7673745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 24938572 - 24938644
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    ||||| |||||| |||||||||  |||||||||| |||  ||||||||||||||||| || ||||| ||||||    
T  24938572 gtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtt 24938644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 34613831 - 34613895
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    |||||||||||| ||||||||  ||||||||| |||| |||||||||||| ||||  ||||||||    
T  34613831 tagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatac 34613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 35496271 - 35496355
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||| ||||||||||||| ||||||   |||  ||||||||||||||||||| ||||| |||||| || |||| ||| |||||    
T  35496271 gatccatcaaaggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtttcctctgaaaattgaacc 35496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 22958865 - 22958782
Alignment:
Q  113 tgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||| ||||||||||| |||||||||||  ||  || ||||| ||||| ||||| |||||| |||||||| |||| |||||||    
T  22958865 tgatctaccaaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttccctctgaaaatcgaa 22958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 3567964 - 3567907
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||| ||| ||||||| |||| |||||||||||| ||| ||||| ||||||||    
T  3567964 gcgtagaggtatgtgcactggtcaagtgttgttcccccttagattcgaatccggtatt 3567907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 10698937 - 10699001
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    ||||| ||| |||||  |||||| ||||||||| | |||  ||||||||||||||||||||||||    
T  10698937 gtttccgattcaccattggtgggtgactaatccaactcgtacgtagaggcatgcgcactggccaa 10699001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 22212534 - 22212606
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactgg-ccaagcgttgttccccctga 188  Q
    |||||||||||| ||||||||||||   || ||||||| ||||||| ||||| | |||||||||||| |||||    
T  22212534 ccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcgtactggtcaaagcgttgttccacctga 22212606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 22276545 - 22276613
Alignment:
Q  163 cactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||| ||||| |||||||| |||  |||| ||||||||||||||| || ||| ||||||||| |||||    
T  22276545 cactgaccaagtgttgttcctcctaggaatagaacccggtattttctgggtacgtccttggaaggagct 22276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 7866683 - 7866555
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| |||||| | ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||  ||||||||||||||    
T  7866683 cactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggt 7866584  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||   ||| ||| ||||||||| |||||    
T  7866583 attcctcgggtacgtccttggaaggagct 7866555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 9812969 - 9812846
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||||||||||||||| |||  ||||||| |||||| |||||||||||||||||||| |||  |||||||||||||||||      
T  9812969 gtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcc 9812870  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  9812869 ccgggtacgtccttggaaggagct 9812846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 12766228 - 12766105
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||||||||||||| | |||  |||||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||      
T  12766228 gtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtattcc 12766129  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  12766128 ccgggtacgtccttggaaggagct 12766105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 9805101 - 9805004
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||||||| |||||||||||  ||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9805101 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 9805004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 221
Target Start/End: Complemental strand, 12081995 - 12081892
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||||||| |||||||| ||  ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |    
T  12081995 caccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgt 12081896  T
Q  218 cctt 221  Q
    ||||    
T  12081895 cctt 12081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 12705111 - 12704988
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||||||||||||||| |||  ||||||| |||||| |||||| ||||||||||||| |||  |||||||||||||||||      
T  12705111 gtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattcc 12705012  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  12705011 ccgggtacgtccttggaaggagct 12704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 42086424 - 42086301
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| |||||||||||  ||  ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||      
T  42086424 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcc 42086325  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||| ||| ||||||||| |||||    
T  42086324 tcgggtacgtccttggaaggagct 42086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 38897724 - 38897825
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  38897724 cactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt-cccctggaaatcgaacccggt 38897822  T
Q  203 att 205  Q
    |||    
T  38897823 att 38897825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 20525935 - 20525812
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||| ||||| |||||||||||  ||  |||||||||||||||||||||| ||| |||||||| |||| |||||||||||| ||||      
T  20525935 gtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattcc 20525836  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||||||||||||||| || |||||    
T  20525835 ccggatacatccttgaaaggagct 20525812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 42291515 - 42291618
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||| ||||||||| |||||||||||  ||| ||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||| |    
T  42291515 gtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattct 42291614  T
Q  208 ccgg 211  Q
    ||||    
T  42291615 ccgg 42291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 3653930 - 3654045
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||||||||||||| |||||||||||  ||| ||||||||||||||||||||| |||||||||||| |  |  ||||||||||||||||| ||||| |    
T  3653930 gatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttctc--taggaatcgaacccggtattctccgggt 3654027  T
Q  214 acatccttggaatgagct 231  Q
    || ||||||||| |||||    
T  3654028 acgtccttggaaagagct 3654045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 4016260 - 4016390
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||||||| |||| || |||||||||  ||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||| |    
T  4016260 cactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgat 4016359  T
Q  203 attttccggatacatccttggaatgagcttc 233  Q
    ||||  | | ||| |||||||||||||||||    
T  4016360 atttctcaggtacgtccttggaatgagcttc 4016390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 14974343 - 14974457
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||||||||||  ||  ||||||||||||| |||||||||||  |||||||||| | ||||||||||||| |||| |||||||||     
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacg 14974442  T
Q  217 tccttggaatgagct 231  Q
    ||||| |||||||||    
T  14974443 tccttagaatgagct 14974457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 19572812 - 19572698
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||  |||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||  ||||||||     
T  19572812 ccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacg 19572713  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  19572712 tccttggaaggagct 19572698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 23383755 - 23383657
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||| || ||||||||||||| ||||||||||   ||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23383755 agtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 23383657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 1538528 - 1538405
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| ||| |||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||      
T  1538528 gtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcc 1538429  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||| |||| |||| |||||    
T  1538428 ccgaatacgtcctcggaaggagct 1538405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 1899050 - 1898975
Alignment:
Q  156 gcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||| |||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagct 1898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 7308374 - 7308497
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||| ||||||| |||||||| ||||||||||||  ||  ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||      
T  7308374 gtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcc 7308473  T
Q  208 ccggatacatccttggaatgagct 231  Q
     |  |||| |||||||||||||||    
T  7308474 tcaaatacgtccttggaatgagct 7308497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 8513616 - 8513493
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| ||||||||| |  ||| ||||||||||||| ||||||||||||| ||||| |||||  |||||||||||||||||      
T  8513616 gtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattcc 8513517  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  8513516 ccgggtacgtccttggaaggagct 8513493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 25417217 - 25417316
Alignment:
Q  132 gactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||  |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||  ||| ||||||||| |||||    
T  25417217 gactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagct 25417316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 30995216 - 30995121
Alignment:
Q  110 ttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| ||||||||||| || ||||||||||||  ||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||    
T  30995216 ttcttatccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtatt 30995121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 5731971 - 5732053
Alignment:
Q  149 cgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||  |||| ||| ||||||||| |||||    
T  5731971 cgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagct 5732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 21149824 - 21149734
Alignment:
Q  115 atccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||| |||||||||||||||| | ||| |||||||| |||||||||||| ||| ||||||||||||||| ||||||||| ||||||    
T  21149824 atccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgttgttccccctgaaaatcgaacctggtatt 21149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 37263337 - 37263241
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||  |||||||| |||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  37263337 gtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgtt-cccctgagaatcgaacccgatatt 37263241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 35403557 - 35403645
Alignment:
Q  143 ttcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||  ||| ||||||||| |||||    
T  35403557 ttcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagct 35403645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 38369783 - 38369700
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||  |||||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  38369783 caaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgtt-cccctgagaatcgaacccgatatt 38369700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 18262634 - 18262725
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||| || ||||||||||||||||||  ||| | ||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  18262634 gatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtatt 18262725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 28857185 - 28857102
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||| | | ||||||||| |||||    
T  28857185 gcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagct 28857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 39728471 - 39728361
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    |||||||| ||||||||| ||| |||||||||||||||||| ||||||||||| |||||| || |||| ||||||||| ||||||  |||| ||| | ||    
T  39728471 caaaggtgagcgactaattcgactcgagcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttct 39728372  T
Q  221 tggaatgagct 231  Q
    ||||| |||||    
T  39728371 tggaaagagct 39728361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 18136332 - 18136413
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||| || |||||| |||||    
T  18136332 gtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagct 18136413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 14588637 - 14588741
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||||||| |||||||||||  ||  ||||||||||||||||||||| |||||||| |||| ||||| ||||||||||| ||||  || ||||| |    
T  14588637 caccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgt 14588736  T
Q  218 ccttg 222  Q
    |||||    
T  14588737 ccttg 14588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 13664317 - 13664234
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||  |  ||||| ||||||||| |||||    
T  13664317 gcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagct 13664234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 39099789 - 39099868
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctg 187  Q
    ||||| || |||||||||||||||||||||||||  ||  ||||||||||||| |||||||||||| |||||||||||||    
T  39099789 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttccccctg 39099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 5079419 - 5079305
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||| ||||||| ||||||||| || ||||||| |||||||||||  |||| | |||||||||   |||||||     
T  5079419 ccaccaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacg 5079320  T
Q  217 tccttggaatgagct 231  Q
    | ||||||| |||||    
T  5079319 tgcttggaaggagct 5079305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 20682636 - 20682706
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctg 187  Q
    |||| |||||||| ||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  20682636 ccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctg 20682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 40117506 - 40117424
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    |||||||||||||||  ||| |||||||  ||  ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40117506 gatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 20228814 - 20228717
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||| ||||||||||||| || ||| | |||||||||| |||||| ||||||| ||||| ||| |  ||||||||||| |||||    
T  20228814 gtttctgatccaccaaagatgggcgactaatctgactcgtgtgtagaggcatacgcactagccaagcattgtttcccttaggaatcgaaccctgtatt 20228717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 24463910 - 24463986
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||||||||||||||||||  ||| || |||||||||||||||||||||| |||||||| || ||| |||||||||    
T  24463910 aaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaaatcgaacc 24463986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 35813021 - 35813133
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| |||||||||||| ||  | |||||| |||||||||||| ||||| || || |||||  |||||||||||||||||   ||| ||| ||||    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtcct 35813120  T
Q  221 tggaatgagcttc 233  Q
    |||||||||||||    
T  35813121 tggaatgagcttc 35813133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 26077198 - 26077115
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||  |||||  ||  |||| |||||||||||||||    
T  26077198 gcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagct 26077115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 11845852 - 11845934
Alignment:
Q  149 cgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||| |||||||||||||   ||||||||||| |||||  ||| ||| ||||||||| |||||    
T  11845852 cgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacccgatatttctcgggtacgtccttggaaggagct 11845934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 23247374 - 23247484
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| ||||||||| |  ||| ||||||||||||||  ||||  ||||||||||||| |||| |||||||||||| ||||  || | ||| ||||    
T  23247374 caaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtcct 23247473  T
Q  221 tggaatgagct 231  Q
    |||||||||||    
T  23247474 tggaatgagct 23247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 41801051 - 41800977
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||  ||| |||||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||    
T  41801051 cgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatatt 41800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 20255456 - 20255343
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||||||| |||||||||||| ||  ||||||||||||||||||||| |||| |||||||  ||||||   ||| |||||||||  |||  ||| |    
T  20255456 caccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgagttacgaccccggtattccccgagtacgt 20255357  T
Q  218 ccttggaatgagct 231  Q
    |||| |||||||||    
T  20255356 ccttagaatgagct 20255343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 43399214 - 43399145
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctga 188  Q
    |||||| |||| ||||||||||   ||| |||||||||||||||||||||||||||||| ||||||||||    
T  43399214 accaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctga 43399145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 14152104 - 14152024
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||| |||||| |||||||||||||||||||||  ||||||||||||||||||||  || | |||||| |||||| |||||    
T  14152104 tagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaaggagct 14152024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 40060344 - 40060296
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  40060344 catgcgcactggccaagtgttgttccccctgaaaatcgaacccggtatt 40060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 41163469 - 41163592
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || |||| |||||||| ||||||||||   ||  |||||||| |||| ||||||||||| ||||||| |||||| |||||||||||||||||     
T  41163469 agtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgtt-cccctgggaatcgaacccggtattc 41163567  T
Q  207 tccggatacatccttggaatgagct 231  Q
     |||| ||| | ||||||| |||||    
T  41163568 cccgggtacgttcttggaaggagct 41163592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 2485293 - 2485171
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| |||||||| ||||||||||||| ||   ||||||||||||||||| |||| || |||||| |||||  ||||||||||| |||||      
T  2485293 gtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgtt-cccctaggaatcgaacccagtattcc 2485195  T
Q  208 ccggatacatccttggaatgagct 231  Q
    | | |||| |||||||||||||||    
T  2485194 ctgaatacgtccttggaatgagct 2485171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 14728180 - 14728081
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgt-tccccctgagaatcgaacccggtattt 206  Q
    ||||| || ||| |||||||| || |||||||||  ||  |||||||||||||||||||| |||||||||||  |||||||| ||||||| |||||||||    
T  14728180 gtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcgaatccggtattt 14728081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 15034172 - 15034049
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||| ||||||||| | ||||||| |  ||  |||||||||||||| ||||| ||||| |||||| ||| ||  ||| ||||||||||||      
T  15034172 gtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattcc 15034073  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||||||||||||| |||||    
T  15034072 ccgggtacatccttggaaggagct 15034049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 28862882 - 28862799
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||| | ||||  ||| |||| || |||||| |||||    
T  28862882 gcgtagaggcatgtgcattggccaagcgttgttccgcctgagaatcgaacctgatattccccgaatacgtctttggaaggagct 28862799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 24875429 - 24875319
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    ||||||||| ||| |||||||  ||| |||||||| |||||||||||| ||| |||||||| |||| ||||||||||| | |||| |  || ||| ||||    
T  24875429 caaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccctaagaatcgaacctgatattctttgggtacgtcct 24875330  T
Q  221 tggaatgagct 231  Q
    |||||| ||||    
T  24875329 tggaataagct 24875319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 30349633 - 30349559
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||||||||||||||||| | |||||||||||   |||| |||||||||||  |||||||| |||||||||    
T  30349633 tagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaa 30349559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 42861237 - 42861351
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||| ||| |||||||  ||  |||||||||||||||||||||||||| |||||| |||  |  ||| ||||||| ||||  |||||||      
T  42861237 ccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccggatatg 42861336  T
Q  217 tccttggaatgagct 231  Q
    |||||||||||||||    
T  42861337 tccttggaatgagct 42861351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 9168272 - 9168337
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    |||| |||||||| |||||||||||  ||  ||||||||| |||||||||||||||||||||||||    
T  9168272 ccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcc 9168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 19839410 - 19839325
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||| ||||||||||| || |||   ||||||||||||||||||  ||||||||||||| ||||| ||| ||| ||||||||||    
T  19839410 aaaggtaggcgactaatctgactcgtatgtagaggcatgcgcactgatcaagcgttgttcctcctgaaaattgaatccggtatttt 19839325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 22295312 - 22295215
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||||| | ||||||| |  ||||||||||| | ||  ||||||||||||||||||||||||||  || |||||||| |||||| |||||| |||||    
T  22295312 tttctgacctaccaaagataagcgactaatccaactcatgcgtagaggcatgcgcactggccaagtattattccccctcagaatcaaacccgatattt 22295215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 18294494 - 18294570
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    ||||| || ||||||||| ||||||| ||||||| |||  | ||||||| |||||||||| ||||||||||||||||    
T  18294494 gtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcccc 18294570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 16755109 - 16755035
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||| |||||| | ||||| |||||||||| |||||  |||||||| || |||||| |||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagct 16755035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 6764458 - 6764531
Alignment:
Q  99 ttttcactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    ||||||| |||||| || ||| ||||| | |||||||||||||  ||| ||||||||||||||||||| |||||    
T  6764458 ttttcaccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcactagccaa 6764531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 20693030 - 20692913
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||| | ||||||| || ||  ||  ||||||||| | ||||||||||||||||| || ||  ||||| |||||||||||      
T  20693030 gtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaacccggtattcc 20692931  T
Q  208 ccggatacatccttggaa 225  Q
    |||| ||| |||||||||    
T  20692930 ccgggtacgtccttggaa 20692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 21487697 - 21487625
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    ||||||||||||||||||||  ||| |   ||||||||||||||| ||||| ||||||||| ||||| ||||||||    
T  21487697 aaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaac 21487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 35006785 - 35006842
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||| ||||| ||||||||||||||| ||  |||| ||||||||||||    
T  35006785 gcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtatt 35006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 1826932 - 1826864
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttg-ttccccctgagaatcgaacc 198  Q
    ||||||||| |||||| ||  ||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  1826932 cgactaatctgattcgtgctcagaggcatgtgcagtggccaagcgttgtttcctcctgagaatcgaacc 1826864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 20590056 - 20590020
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20590056 gcgtagagtcatgcgcactggccaagcgttgttcccc 20590020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 21375453 - 21375373
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    |||| ||||| |||||| ||||| ||| |||||||||||| ||  ||||||| ||||||||||||| |||  |||||||||    
T  21375453 cactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttccc 21375373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 25467467 - 25467419
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||||||||||||| ||||||||| ||||||||| ||||| |||||||    
T  25467467 gcgtagaggcatgcgtactggccaatcgttgttcctcctgaaaatcgaa 25467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 7336710 - 7336644
Alignment:
Q  115 atccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttc 181  Q
    ||||||||||||| | ||| |||||||  ||| ||||||||||||||||||||   |||||||||||    
T  7336710 atccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttc 7336644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 20516460 - 20516498
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcga 195  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  20516460 catgcgcactggccaagcgttgttccccctaaaaatcga 20516498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 18045694 - 18045629
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    ||||||||||||| ||   ||||| ||||||||||||| ||||||||||| |||||  ||||||||    
T  18045694 gtagaggcatgcgtaccaaccaagggttgttccccctgggaatcgaacccagtattccccggatac 18045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 20705620 - 20705563
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||||| |||| |||||||| |||||| ||| ||| ||| ||||    
T  20705620 gcgtagaggcatgcgcactgaccaaacgttgttctccctgaaaattgaatccgatatt 20705563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 38297014 - 38297071
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||| | |||||||||| |||| ||||||||||| || |||| ||||||||||||    
T  38297014 gcgtagaagaatgcgcactgaccaaacgttgttccccttgggaattgaacccggtatt 38297071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 5253233 - 5253356
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||||||| |||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||      
T  5253233 gtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcc 5253332  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  5253333 ccgggtacgtccttggaaggagct 5253356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 226
Target Start/End: Original strand, 3587954 - 3588073
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| |||||| ||||||| | ||||||||||| |||  ||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||     
T  3587954 agtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattc 3588053  T
Q  207 tccggatacatccttggaat 226  Q
    ||||||||| || |||||||    
T  3588054 tccggatacgtctttggaat 3588073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 6606107 - 6606230
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||||||  ||  |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||      
T  6606107 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattcc 6606206  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  6606207 ccggatacgtccttggaaggagct 6606230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 8611984 - 8612107
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| ||||||||||||||||||||||||| |||  ||||||| |||||| |||||| ||||||||||||| |||  |||||||||||||||||      
T  8611984 gtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaacccggtattcc 8612083  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  8612084 ccgggtacgtccttggaaggagct 8612107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 21898748 - 21898625
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| |||||||  |||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||      
T  21898748 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattcc 21898649  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  21898648 ccggatacgtccttggaaggagct 21898625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 3601184 - 3601087
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||||||| |||||||||||  ||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3601184 gtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtatt 3601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 12606520 - 12606407
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| | ||||||  |||||||| |    
T  12606520 caccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgt 12606421  T
Q  218 ccttggaatgagct 231  Q
     ||||||| |||||    
T  12606420 tcttggaaggagct 12606407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 30788863 - 30788984
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||| || |||||||||||||||||||||| |||||||  || |||||||| |||||| ||||      
T  30788863 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgtt--ccatgagaatcaaacccgatattcc 30788960  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||||||||||||| |||||    
T  30788961 ccggatacatccttggaaggagct 30788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 10311488 - 10311602
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| |||| ||||||||||  | ||| |||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||  ||||||||     
T  10311488 ccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacg 10311587  T
Q  217 tccttggaatgagct 231  Q
    | ||||||| |||||    
T  10311588 ttcttggaaggagct 10311602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 2271308 - 2271434
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| |||||||| ||| ||||||||| |||||||||||  ||| |||||||| ||||||||||||| ||||||||||  | ||||||||||||||||||    
T  2271308 cactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgtt--ctctgagaatcgaacccggt 2271405  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  ||| |||| ||||||||| |||||    
T  2271406 attccccgaatacgtccttggaaggagct 2271434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8932761 - 8932644
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| |||||||||| || |||||||  ||  ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||      
T  8932761 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattcc 8932662  T
Q  208 ccggatacatccttggaa 225  Q
    ||||||||||||||||||    
T  8932661 ccggatacatccttggaa 8932644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8944227 - 8944110
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| |||||||||| || |||||||  ||  ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||      
T  8944227 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattcc 8944128  T
Q  208 ccggatacatccttggaa 225  Q
    ||||||||||||||||||    
T  8944127 ccggatacatccttggaa 8944110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 19089598 - 19089475
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||| | |||||||||||  ||| |||||||||||||| ||||||||||| ||||||||||||| ||||| |||| ||||||      
T  19089598 gtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtattcc 19089499  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||||||| |||||| ||||||||    
T  19089498 tcggatacgtccttgaaatgagct 19089475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 12635914 - 12635792
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||  ||||||||||||||||  | | ||||||||||||||||||| ||||||||||||| |||||| ||||| |||| ||||||      
T  12635914 gtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaacctggtattcc 12635815  T
Q  208 ccggatacatccttggaatgagc 230  Q
    |||||||| ||||||||| ||||    
T  12635814 ccggatacgtccttggaaggagc 12635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 9633635 - 9633708
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttc 181  Q
    ||||| || |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  9633635 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 29444770 - 29444871
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||| || ||||||||| ||| | |||||||||  ||  |||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  29444770 cactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggt 29444869  T
Q  203 at 204  Q
    ||    
T  29444870 at 29444871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 13036054 - 13036137
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||  ||| |||| ||||||||| |||||    
T  13036054 gcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagct 13036137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 9179747 - 9179869
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| |||||||||||||||| ||||||||||   ||  ||||||||| ||||  ||||| |||| ||||||||||||| |||||||||||||||||  |    
T  9179747 tttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccc 9179846  T
Q  209 cggatacatccttggaatgagct 231  Q
     || ||| |||||||||||||||    
T  9179847 tgggtacgtccttggaatgagct 9179869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 13469024 - 13468910
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||||||||||||| |  ||| ||||||||||||| |||||| |||| |||||||||||||  |||| ||||| ||||||  ||||||||     
T  13469024 ccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaacctggtattccccggatacg 13468925  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  13468924 tccttggaaggagct 13468910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 5029918 - 5029825
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    |||||| || ||| ||||| |||||||||||||| | ||  |||||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  5029918 agtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaacccg 5029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 11142694 - 11142578
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||| ||| | ||||||| || ||  ||||||||||||||||||||| ||| ||||||| || ||| ||||||||| |||||||| |||| ||      
T  11142694 ccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaactcggtatttcccgggtatg 11142595  T
Q  217 tccttggaatgagcttc 233  Q
    |||||||||||||||||    
T  11142594 tccttggaatgagcttc 11142578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 14107387 - 14107491
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaat 226  Q
    |||||||||||||||  ||  ||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||  ||| |||| || ||||||     
T  14107387 tgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaag 14107486  T
Q  227 gagct 231  Q
    |||||    
T  14107487 gagct 14107491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 34954629 - 34954752
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||||||||| ||||||||| |  ||  ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||      
T  34954629 gtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtattcc 34954728  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  34954729 ccaggtacgtccttggaaggagct 34954752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 9366445 - 9366556
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| || ||||||||  ||| |||||||||||||||||||||||||||||| |||||||| | ||||||||| | ||||  ||   ||||||    
T  9366445 accaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatc 9366543  T
Q  219 cttggaatgagct 231  Q
    ||||||| |||||    
T  9366544 cttggaaggagct 9366556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 33859369 - 33859427
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||    
T  33859369 gcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtattt 33859427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 29333160 - 29333271
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| ||||| || ||  ||  ||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||  | || ||| ||    
T  29333160 accaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgtt-cccctggaaatcgaacccggtattccctgggtacgtc 29333258  T
Q  219 cttggaatgagct 231  Q
    ||||||| |||||    
T  29333259 cttggaaggagct 29333271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 9147361 - 9147278
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||| ||||||| |||| || |||||||||| |||||||||||| ||||  || | ||| |||||||||||||||    
T  9147361 gcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagct 9147278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 24671916 - 24671999
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||| |||||| |||| ||||||||| ||| |||| |||||||||||| ||| ||||| |||||| || |||||    
T  24671916 gcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagct 24671999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 8888976 - 8888910
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    |||||| ||||||||| |||||||||||| ||  ||||||||| ||||||||||||||| |||||||    
T  8888976 gatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 13391367 - 13391290
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||| | ||||| ||||||| ||||||| ||| ||||    
T  13391367 tgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgtt-cccctgaaaatcgaatccgatatt 13391290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 13627336 - 13627257
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||||||| |||||||||| ||||| |  |||||||||||||| |||| ||||||||| |||  |||||||||| ||||    
T  13627336 accaaaggtaggcgactaattcgatttgtacgtagaggcatgcgaactgaccaagcgttcttcttcctgagaatcaaacc 13627257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 15643853 - 15643961
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| ||||||||||||||||||||| ||  ||||||    ||||||| ||||| || |||||| |||||| |||||||||||| || || || |||||     
T  15643853 ccactaaaggtgggcgactaatccgactcatgcgtag----atgcgcattggcctagtgttgtt-cccctgtgaatcgaacccgtta-ttcccagatacg 15643946  T
Q  217 tccttggaatgagct 231  Q
    |||||||||||||||    
T  15643947 tccttggaatgagct 15643961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 17114920 - 17114981
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    |||||||||||||||||||||  ||  |||||||||||||  || |||||||||||||||||    
T  17114920 caaaggtgggcgactaatccggctcatgcgtagaggcatgtccattggccaagcgttgttcc 17114981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 30410505 - 30410456
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    |||||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  30410505 gcgtagaggcatgcgcactggttaagtgttgttcctcctgagaatcgaac 30410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 31129237 - 31129193
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaat 192  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  31129237 gcgtagaggcatgcgcactagccaagcgttgctccccctgtgaat 31129193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 32157177 - 32157252
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    |||||||||||||||||| |||  |||||||| |  ||  ||||||||| ||||||||||| |||| |||||||||    
T  32157177 gtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttccc 32157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 19230592 - 19230665
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||  ||| ||||||||||||||  |||| |||||||||||| ||| ||| ||||||| ||||||||    
T  19230592 cgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgtt-cccttgaaaatcgaatccggtatt 19230665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 2105156 - 2105213
Alignment:
Q  164 actggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcctt 221  Q
    ||||||||||||||||| |||||   ||||||||||||||||| |||| ||| |||||    
T  2105156 actggccaagcgttgtttcccctagaaatcgaacccggtatttcccgggtacgtcctt 2105213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 10312801 - 10312745
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||||||||| || || |||| |||| ||| ||||| ||||||||||||||||||    
T  10312801 gtagaggcatgcacattgcccaaacgttattctccctgggaatcgaacccggtattt 10312745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 33940098 - 33940014
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||| |||||||||||  ||| | ||||||||||||||| |||  |||  ||||||| |||||||||| ||||| |||||    
T  33940098 caaagatggacgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacccagtatt 33940014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 33498856 - 33498963
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||| ||||||||| |||||||||||  ||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |    
T  33498856 gatccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattttccaggt 33498955  T
Q  214 acatcctt 221  Q
    ||||||||    
T  33498956 acatcctt 33498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 43959832 - 43959954
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| ||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||      
T  43959832 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattcc 43959931  T
Q  208 ccggatacatccttggaatgagc 230  Q
    |||| ||| || |||||| ||||    
T  43959932 ccgggtacgtcattggaaggagc 43959954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 37339908 - 37339799
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgt-tccccctgagaatcgaacccggtattttccggatac 215  Q
    |||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||  |||| |||    
T  37339908 ccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcgaacccggtattccccgggtac 37339809  T
Q  216 atccttggaa 225  Q
    ||||||||||    
T  37339808 atccttggaa 37339799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 17642014 - 17642138
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || ||||||||||||| |||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  17642014 agtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtattt 17642113  T
Q  207 tccggatacatccttggaatgagct 231  Q
     | || ||| ||| ||||| |||||    
T  17642114 cctgggtacgtccgtggaaggagct 17642138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 9853289 - 9853411
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    ||||||| ||||||||||||| ||| ||||| | |||| | |||||||||||||||||||  || ||||||| |||||  ||||||||||||||||||||    
T  9853289 tttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttc 9853388  T
Q  209 cggatacatccttggaatgagct 231  Q
    ||| ||||||||||||| |||||    
T  9853389 cgggtacatccttggaaggagct 9853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 11397909 - 11398022
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||||||||||| ||  |||||||||||| |||| ||||||| ||||||| |||||  ||||||||||||||||| ||||||||||    
T  11397909 ccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgtt-cccctcggaatcgaacccggtattctccggataca 11398007  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  11398008 tccttggaaggagct 11398022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 10336607 - 10336490
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||| ||||||||| ||| |||||||  ||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||    
T  10336607 gatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggat 10336508  T
Q  214 acatccttggaatgagct 231  Q
    || || |||||| |||||    
T  10336507 acgtctttggaaggagct 10336490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 18649370 - 18649486
Alignment:
Q  115 atccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggata 214  Q
    |||||| |||||||||||| ||||| |  |||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||    
T  18649370 atccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccagata 18649469  T
Q  215 catccttggaatgagct 231  Q
    | ||||||||| |||||    
T  18649470 cgtccttggaaggagct 18649486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 18915955 - 18915847
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| |||| ||||||||||||  ||| |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||  |||| |||     
T  18915955 ccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacg 18915856  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  18915855 tccttggaa 18915847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 5855619 - 5855496
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| |||||||  |||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||      
T  5855619 gtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattcc 5855520  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||| ||||||||| |||||    
T  5855519 ccgaatacgtccttggaaggagct 5855496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 8764088 - 8763965
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||||||  ||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||      
T  8764088 gtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattcc 8763989  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  8763988 ccgggtacgtccttggaaggagct 8763965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 14254279 - 14254400
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||||||||| |||||||||||  ||  ||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||      
T  14254279 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattcc 14254378  T
Q  208 ccggatacatccttggaatgag 229  Q
    ||| |||| |||||||||||||    
T  14254379 ccgaatacgtccttggaatgag 14254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 16956568 - 16956440
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || |||||||||||| | ||||||||||  ||| ||||||||||||||||||||| ||| ||||||| |||||||||| ||||| ||||    
T  16956568 cactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaacacggt 16956469  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  |||| ||| ||||||||| |||||    
T  16956468 attccccgggtacgtccttggaaggagct 16956440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 33418137 - 33418249
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| |||||||||||  ||| || ||||||||||||||||||||||||||||| ||||||  |||||||| |||||||| ||||| ||| ||    
T  33418137 accaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtc 33418236  T
Q  219 cttggaatgagct 231  Q
     |||||| |||||    
T  33418237 tttggaaggagct 33418249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 34334353 - 34334429
Alignment:
Q  155 ggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagct 34334429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 2567373 - 2567250
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||| ||| || |||||| || ||| | |||||||||||||||||||||||||||||||  ||| || |||||||||||||||| |    
T  2567373 gtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattct 2567274  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||| ||||||||| |||||    
T  2567273 ccgaatacgtccttggaaggagct 2567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 41663867 - 41663990
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| ||||||||||   ||  |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||      
T  41663867 gtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattcc 41663966  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||| ||| |||||    
T  41663967 ccggatacgtccttagaaggagct 41663990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 50371845 - 50371968
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||||| |||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||  ||||| |||||||| || ||||||    
T  50371845 gtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaacacgctatttt 50371944  T
Q  208 ccggatacatccttggaatgagct 231  Q
     | ||||||||||| ||| |||||    
T  50371945 tcagatacatccttagaaggagct 50371968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 50503372 - 50503495
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||  |||||||||| ||||||  ||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||      
T  50503372 gtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattcc 50503471  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| |||||| || |||||    
T  50503472 ccggatacgtccttgaaaggagct 50503495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 17092488 - 17092613
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||||| ||||||||||| |||||||||||  ||| |||||||||||| | |||||||||| ||||||| ||||||| |||||||| || |||||     
T  17092488 gtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttc 17092587  T
Q  208 ccggatacatccttggaatgagcttc 233  Q
    ||| |||| ||| || || |||||||    
T  17092588 ccgaatacgtccatgaaaggagcttc 17092613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 2980965 - 2981065
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagc 230  Q
    |||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| ||| ||||||||||| |||||  |||||||| ||| ||||| ||||    
T  2980965 cgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagc 2981064  T
Q  231 t 231  Q
    |    
T  2981065 t 2981065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 12036756 - 12036880
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| |||||||||||||||| ||| ||||| |  ||| ||||||||||||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||    
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctc 12036855  T
Q  209 cggatacatccttggaatgagcttc 233  Q
      | ||| ||||||||| |||||||    
T  12036856 taggtacgtccttggaaggagcttc 12036880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 15238126 - 15238214
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| |||||||||  |||||| |||||||||||||| || ||||||||||||| |||||||| |||||||||||| ||||    
T  15238126 ccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatatt 15238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 34719874 - 34719750
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || |||||||||||| |||||||||| || ||| ||||||||||||||||||||| |||||||| |||||  || ||||||||||| |||||     
T  34719874 agtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattc 34719775  T
Q  207 tccggatacatccttggaatgagct 231  Q
     || | ||| ||||||||| |||||    
T  34719774 cccaggtacgtccttggaaggagct 34719750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 49078188 - 49078088
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagc 230  Q
    |||||||||||  ||  |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||  |||||||| ||||| ||| ||||    
T  49078188 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagc 49078089  T
Q  231 t 231  Q
    |    
T  49078088 t 49078088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 30927738 - 30927861
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||| |||| |||||||||||  ||  |||||||||||||| || |||||||||||||||||| |||  ||||||||||| |||||     
T  30927738 gtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttc 30927837  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  30927838 ccaggtacgtccttggaaggagct 30927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 31576598 - 31576681
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||  |||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  31576598 gcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccggtattttcgggatacgtccttagaatgagct 31576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 32142857 - 32142979
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| |||||||| ||||||||| ||  ||  ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||     
T  32142857 gtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggta-ttc 32142955  T
Q  208 ccggatacatccttggaatgagct 231  Q
    | || ||| |||||||||||||||    
T  32142956 cagggtacgtccttggaatgagct 32142979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 45361933 - 45362016
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  | || ||| ||||||||| |||||    
T  45361933 gcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcccagggtacgtccttggaaggagct 45362016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 15466062 - 15465940
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| ||||| |||| || ||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||      
T  15466062 gtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattcc 15465963  T
Q  208 ccggatacatccttggaatgagc 230  Q
    ||  |||| ||||||||| ||||    
T  15465962 ccaaatacgtccttggaaggagc 15465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 33004043 - 33004149
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||| ||||||  ||||||| ||| ||||  |||||||| ||||||||    
T  33004043 ggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccggatacgtccttgga 33004142  T
Q  225 atgagct 231  Q
    | |||||    
T  33004143 aggagct 33004149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 42710149 - 42710266
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||| ||||| ||||| |||||||| || ||   ||||||||||||||||||||||||||  ||||| ||||||| ||||||||||| ||||||    
T  42710149 gtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatttt 42710248  T
Q  208 ccggatacatccttggaa 225  Q
    | |||||| || ||||||    
T  42710249 ctggatacgtctttggaa 42710266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 10422874 - 10422762
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| |||||||||||  ||  |||||||||||||||||||||||||| |||||||| |||   ||||||||||||||||  ||| |||| ||    
T  10422874 accaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtc 10422775  T
Q  219 cttggaatgagct 231  Q
     |||||| |||||    
T  10422774 attggaaggagct 10422762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 40288483 - 40288611
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||||||| | || ||||||||||||  ||| | ||||||||||||  ||||||||| ||||||||||||||  |||||||||||||    
T  40288483 cactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggt 40288582  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  ||| |||| ||||||||| |||||    
T  40288583 attccccgaatacgtccttggaaagagct 40288611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 6563498 - 6563415
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||| |||| |||||||||||||||||||||||||  |||||||||||||| || | ||| ||||||||||||| |||||    
T  6563498 gcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagct 6563415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 26325909 - 26325786
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| |||||||||||  ||  |||||||||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||      
T  26325909 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcc 26325810  T
Q  208 ccggatacatccttggaatgagct 231  Q
     ||||||| |||||| || |||||    
T  26325809 tcggatacgtccttgaaaggagct 26325786  T

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Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 31152803 - 31152690
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    |||||||||||| ||||||||  || ||| | ||||||||| |||||||| ||||||||| ||||||| |  ||||||||||||||||  | || |||||    
T  31152803 caccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacat 31152704  T
Q  218 ccttggaatgagct 231  Q
    |||||||| |||||    
T  31152703 ccttggaaagagct 31152690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 34697419 - 34697335
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| ||||||||||||||||  ||  |||||||||||||| |||| |||||| |||||||||||| ||||||||||| ||||||    
T  34697419 caaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtatt 34697335  T

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Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 17358522 - 17358605
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||||  ||  |||| |||||| ||||||||    
T  17358522 gcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagct 17358605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 21849225 - 21849307
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    |||||||  ||| ||||||||||||  ||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  21849225 ccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgtt-cccctgggaatcgaacccg 21849307  T

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Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 48798121 - 48798204
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||| | ||||||||||||||||||  ||||||||||| ||||  |||||||| || |||||| |||||    
T  48798121 gcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T

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Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 9659199 - 9659312
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||||||||||  ||  ||||| ||||||||||||| | ||| ||||||| |||||| |||||||||||||||||  |||  |||     
T  9659199 ccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgtt-cccctgggaatcgaacccggtattccccgagtacg 9659297  T
Q  217 tccttggaatgagct 231  Q
    ||||| |||||||||    
T  9659298 tccttagaatgagct 9659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 10172982 - 10173104
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||||||||||| |||||||  ||  ||||||||||||| ||||||||||||||||||||    || |||| ||| ||||||||      
T  10172982 gtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaatccggtattcc 10173081  T
Q  208 ccggatacatccttggaatgagc 230  Q
    || ||||| ||||||||| ||||    
T  10173082 ccagatacgtccttggaaggagc 10173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 16263602 - 16263528
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttg 222  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||| ||||||  || ||||| ||||||    
T  16263602 gcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttg 16263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 44969761 - 44969664
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    ||||| |||||||||| | ||| |||||||||||  ||  |||||| ||||||| |||||||||||||||||| | ||||||||||||||| |||||||    
T  44969761 gtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt-ctcctgagaatcgaacctggtattt 44969664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 41696608 - 41696701
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    |||||| |||||| |||||||| |||||||||| |||||| |||||||||||| | |||||| |||| |||  ||||||||  |||||||||||    
T  41696608 agtttccgatccatcaaaggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcgaacccg 41696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 45536765 - 45536688
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||||||||| ||||||||||||||||||||||| |   |||||||||||||||| ||||| ||| || ||||||    
T  45536765 gcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaa 45536688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 13262163 - 13262063
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    ||||| |||||||||||| ||| |||||||| |||||| | || |||| |||||||| |||||  ||||||||||||||||  ||  |||||||||||||    
T  13262163 ggtggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattccccatatacatccttgga 13262064  T
Q  225 a 225  Q
    |    
T  13262063 a 13262063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 34878045 - 34877970
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||||||||||||||||||| |||||||| |||  |||||||||| ||||||  ||| |||| |||||||||    
T  34878045 gtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaa 34877970  T

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Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 45726450 - 45726541
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||  |||||||||||  ||  |||||||| ||| ||||||||||||  ||| |||| ||||||||||||||| ||||||    
T  45726450 gatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtatt 45726541  T

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Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 5063866 - 5063979
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||||||||||||||   ||| || ||||| ||| |||||||||||||||||| | ||||| ||||||||| ||  ||||  || ||||| ||    
T  5063866 accaaaggtgggcgactaatccagctcgtgcatagagacatacgcactggccaagcgttg-tgcccctaagaatcgaatccaatattccccagatacgtc 5063964  T
Q  219 cttggaatgagcttc 233  Q
    ||||||| |||||||    
T  5063965 cttggaaggagcttc 5063979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 8905211 - 8905284
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||| |||| ||||||||| || |||||| |||||    
T  8905211 catgcgcactggccaagcgttgttccccttga-aatcgtacccgatattctccggatacgtcattggaaggagct 8905284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 48761262 - 48761156
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| ||||||||||   ||| |||||||||||||  ||||| |||| ||||||||| | ||| ||||||| || |||||| | ||||||||     
T  48761262 accaaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaaacgttgttcctcttgaaaatcgaatccagtatttccgggatacatt 48761163  T
Q  219 cttggaa 225  Q
    |||||||    
T  48761162 cttggaa 48761156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 4581693 - 4581758
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaag 173  Q
    ||||| || ||||||||||||| |||||| ||||  ||| ||||||||||||||||||||||||||    
T  4581693 gtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 12744534 - 12744622
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    |||||||| |||||||  ||| ||||||||| ||  ||  |||||||| |||||||||| | ||||||||||||||||||| |||||||    
T  12744534 gtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaa 12744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 12755524 - 12755612
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    |||||||| |||||||  ||| ||||||||| ||  ||  |||||||| |||||||||| | ||||||||||||||||||| |||||||    
T  12755524 gtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaa 12755612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 31734344 - 31734269
Alignment:
Q  149 cgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||| || |||||   ||| |||||||||||||    
T  31734344 cgtagaggcatgcgcactggccaatcgttgtttcccct-agaatcgaatccagtattcctcgggtacatccttggaa 31734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 32928 - 32845
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||| ||||| ||||  || | ||| ||||||||| |||||    
T  32928 gcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagct 32845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 38859140 - 38859219
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    ||||||||||||| ||||| || ||| ||||||||||||| ||| || |||| | ||||| |||||| ||||||||||||    
T  38859140 caaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaacccg 38859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 892314 - 892431
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttc 208  Q
    |||| ||||||||||||||||||||||||||||  ||  ||     ||||||| || |||| ||| ||||||||||||  |||||||||||||||||  |    
T  892314 tttccgatccaccaaaggtgggcgactaatccggctcatgc-----ggcatgcacattggctaagtgttgttccccctaggaatcgaacccggtattccc 892408  T
Q  209 cggatacatccttggaatgagct 231  Q
    || |||| |||||| || |||||    
T  892409 cgaatacgtccttgaaaggagct 892431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 5504128 - 5504038
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||| || ||| ||||||||| |||||||||||  ||  ||||||||||||| |||||   |||||||||||  ||||||||||||||||    
T  5504128 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacc 5504038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 14357825 - 14357735
Alignment:
Q  135 taatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    ||||||| |||| ||||||||||||||||||||| ||| ||||||| |   ||  ||||||||| | |||||||| ||||| |||||||||    
T  14357825 taatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcgaacctgatattttccagatacgtccttggaa 14357735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 26258783 - 26258670
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||| |||||||| ||| |||||||| ||  ||||| ||||||| |||||| |||||||||| ||  ||||||||||||| ||||||||  |||| |||     
T  26258783 ccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttg-tcttcctgagaatcgaatccggtattccccgggtacg 26258685  T
Q  217 tccttggaatgagct 231  Q
    || |||||| |||||    
T  26258684 tctttggaaggagct 26258670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 51437517 - 51437443
Alignment:
Q  157 catgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||| ||||||||||||||| || |||||||||||| ||||   ||||||| |||||| || |||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagct 51437443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 5143171 - 5143239
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    |||||| |||||||| ||||||||||||  | | ||||||||||||||| |||| |||||||||||||||    
T  5143171 gatccatcaaaggtgagcgactaatccgtct-gtgcgtagaggcatgcgtactgaccaagcgttgttccc 5143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 26660234 - 26660138
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||||||| |||||||||||  ||  ||||||||||||||| ||||  |||  |||||||||| ||  ||||||||||||||||    
T  26660234 gtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtatt 26660138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 28324631 - 28324688
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||||| ||||| |||||| |||| | |||||||||||| ||||    
T  28324631 gcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatatt 28324688  T

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Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 35908838 - 35908757
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggcc-aagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| |||||||||||  ||  |||||||||||||||||||| || ||| |||||||||||| | ||||||| ||||||||    
T  35908838 ggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtatt 35908757  T

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Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 47312950 - 47313026
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||||||| |||||||||||| ||||||| |||||  ||||| |||||||||||  || ||||| |||||||||    
T  47312950 gcgtagaggcatacgcactggccaaacgttgtt-cccctaggaatcaaacccggtattccccagatacgtccttggaa 47313026  T

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Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 18808316 - 18808272
Alignment:
Q  154 aggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||    
T  18808316 aggcatgcgcactggtcaagcgttgttccctctgagaattgaacc 18808272  T

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Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 25165488 - 25165401
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||| | ||||||||||  | | || |||||||||||||||||||  || |||||| ||||||| ||||||| ||||||||    
T  25165488 ccaccaaaggtgagtgactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgtt-cccctgataatcgaatccggtatt 25165401  T

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Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 6899655 - 6899597
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcact 166  Q
    ||||| |||||| |||||||||||||||||||||  | | ||||| |||||||||||||    
T  6899655 gtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 17988694 - 17988767
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||| |||  ||||||||| ||||||||||||||||| |||||  |||||| |||| |||| ||||||    
T  17988694 cgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtt-tccctgaaaatcaaacctggtatt 17988767  T

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Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 38791621 - 38791699
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccct 186  Q
    |||| ||||||| ||||| ||| |||||||| ||  ||  ||||||||||||||||||| ||||| ||||||| |||||    
T  38791621 gtttttgatccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcacttgccaatcgttgtttcccct 38791699  T

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Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 42744835 - 42744801
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttcc 182  Q
    |||||||||||||| ||||||||||||||||||||    
T  42744835 gcgtagaggcatgctcactggccaagcgttgttcc 42744801  T

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Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 13265995 - 13265914
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgag 229  Q
    |||||||||||||||||||||| |  |||||||  ||||  |||||||||| ||||||   ||||||| ||||| |||||||    
T  13265995 gcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcctcggatacgtccttagaatgag 13265914  T

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Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 32150946 - 32151023
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||| ||||||||| ||  ||  ||||| |||||||||||||| ||||  |||||||||||||  |||||||||    
T  32150946 caaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacc 32151023  T

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Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 18708564 - 18708648
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| |||||||||| |  ||  | ||||||||||||||||| ||||||| ||| | ||||||  |||||||||| |||||    
T  18708564 caaaggtgagcgactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaacccagtatt 18708648  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 19195423 - 19195391
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    ||||||||||||||||||||||||| |||||||    
T  19195423 gcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

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Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 50095001 - 50094925
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    ||||| || |||| || ||||| |||||||||||| ||  ||||||| ||||||| ||||| ||| |||||||||||    
T  50095001 gtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttcccc 50094925  T

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Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 30767253 - 30767375
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||| || |||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||| |||||||||||||  ||||||||||| |    
T  30767253 cactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgat 30767352  T
Q  203 attttccggatacatccttggaa 225  Q
    |||  || | |||||||||||||    
T  30767353 attccccaggtacatccttggaa 30767375  T

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Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 49198447 - 49198330
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||||||||||| ||||| |||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||      
T  49198447 gtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattcc 49198348  T
Q  208 ccggatacatccttggaa 225  Q
    |||||||  |||||||||    
T  49198347 ccggatatgtccttggaa 49198330  T

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Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 7328930 - 7328823
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||  ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||     
T  7328930 ccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacg 7328832  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  7328831 tccttggaa 7328823  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 35316052 - 35315929
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||| |||||||||||||||   ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| |    
T  35316052 gtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattct 35315953  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  35315952 ccgggtacgtccttggaaggagct 35315929  T

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Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 51060292 - 51060415
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| ||||||||||  |||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||      
T  51060292 gtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattcc 51060391  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||||||| |||||||||| |||||    
T  51060392 ccggatagatccttggaaggagct 51060415  T

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Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 13894016 - 13893899
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    ||||||||||||||||||||||||||||  ||| | ||||||||||||||| || |||||||||||||||||||  |||| |||||||||||  |||||     
T  13894016 gatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccggac 13893917  T
Q  214 acatccttggaatgagct 231  Q
    || ||||||||| |||||    
T  13893916 acgtccttggaaggagct 13893899  T

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Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 8164648 - 8164552
Alignment:
Q  109 tttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |   ||| ||||||||||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtatt 8164552  T

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Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 41630534 - 41630646
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    |||||||||||||||||||||||  ||  | ||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||||| ||| ||    
T  41630534 accaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtattttccggttacgtc 41630633  T
Q  219 cttggaatgagct 231  Q
    | ||||| |||||    
T  41630634 catggaaggagct 41630646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 15320282 - 15320159
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||||||||||||||||||||||||  ||| |||||||||||||| |||||||||| | ||||||| |||   ||||||||||||||||      
T  15320282 gtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtattcc 15320183  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  15320182 ccgggtacgtccttggaaggagct 15320159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 30045922 - 30045820
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||||||||  || ||| ||||||||| ||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  30045922 cactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggt 30045823  T
Q  203 att 205  Q
    |||    
T  30045822 att 30045820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 28572222 - 28572319
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || |||||||||||||||||||||||||  ||| ||||||||||||||  ||||||||||||||||| |||||| ||||||||||| |||||    
T  28572222 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtatt 28572319  T

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Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 35923640 - 35923757
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggat 213  Q
    |||||| ||||| ||| |||||||| ||| ||| || |||||||||||||||||||||| |||||||||||||  |||||||||| |||||| ||| | |    
T  35923640 gatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggt 35923739  T
Q  214 acatccttggaatgagct 231  Q
    || |||||||||||||||    
T  35923740 acgtccttggaatgagct 35923757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 6462485 - 6462385
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagc 230  Q
    |||||||||||  ||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  || ||||| ||||||||| ||||    
T  6462485 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagc 6462386  T
Q  231 t 231  Q
    |    
T  6462385 t 6462385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 11687161 - 11687245
Alignment:
Q  149 cgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagcttc 233  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| | ||| ||||||||| |||||||    
T  11687161 cgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 26043908 - 26043812
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtat 204  Q
    ||||||||  ||||||||||| ||||||||||||  ||  |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  26043908 gtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 29136000 - 29135892
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| |||||  ||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||  ||||||||     
T  29136000 ccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacg 29135901  T
Q  217 tccttggaa 225  Q
    |||||||||    
T  29135900 tccttggaa 29135892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 49543616 - 49543492
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || |||| ||||||||||||||||| ||  ||| |||||||||||||| ||||| |||| ||||||||||| ||||||||||||||| ||||     
T  49543616 agtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattc 49543517  T
Q  207 tccggatacatccttggaatgagct 231  Q
     | |||||| ||||||||| |||||    
T  49543516 ccgggatacgtccttggaaggagct 49543492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 51682960 - 51683088
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||||||  |||||||||||||||||  ||| | | ||||||||||||||||| |||||||||||||||||| |||||||||| |||    
T  51682960 cactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggt 51683059  T
Q  203 attttccggatacatccttggaatgagct 231  Q
    |||  |||||||| || |||||| |||||    
T  51683060 attccccggatacgtctttggaaggagct 51683088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 47219240 - 47219117
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||| ||||||||| |||||||||||  ||  ||||||||||||||||||| ||||||||||||| ||| || |||||||||| ||||||      
T  47219240 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtattcc 47219141  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||||||| ||||||||| |||||    
T  47219140 ccggatacgtccttggaaagagct 47219117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 48342116 - 48341993
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||||| ||| ||||||||| | |||  ||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||      
T  48342116 gtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattcc 48342017  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  48342016 ccaggtacgtccttggaaggagct 48341993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 50405614 - 50405705
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    ||||| || ||||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||  |||||||||||    
T  50405614 gtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 53649823 - 53649700
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||| ||||||||  |||||||||||  ||  |||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||      
T  53649823 gtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtattcc 53649724  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||| ||||||||| |||||    
T  53649723 ccgaatacgtccttggaaggagct 53649700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 10040643 - 10040530
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| |||| | ||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |||| |||     
T  10040643 ccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt-cccctgagaatcgaacccgatattccccgggtacg 10040545  T
Q  217 tccttggaatgagct 231  Q
    ||||| ||| |||||    
T  10040544 tccttagaaggagct 10040530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 10855459 - 10855357
Alignment:
Q  129 ggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatga 228  Q
    |||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||||| ||   ||||||||||||| ||    
T  10855459 ggcgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaagga 10855360  T
Q  229 gct 231  Q
    |||    
T  10855359 gct 10855357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 25295047 - 25294933
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||| ||||| |||||||||||  ||  || ||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||  ||||||||     
T  25295047 ccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacg 25294948  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  25294947 tccttggaaggagct 25294933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42412802 - 42412908
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||| ||||||||||||  ||  ||||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||  |||||||| ||||||||    
T  42412802 ggtgagcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttgga 42412901  T
Q  225 atgagct 231  Q
    | |||||    
T  42412902 aggagct 42412908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 47749127 - 47749232
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    |||||||||||||||||||| ||  ||| |||||||||||||||||||||||||| |||||| |||||  |||||||||||||||||  | |||||| ||    
T  47749127 accaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgtt-cccctaggaatcgaacccggtattccctggatacgtc 47749225  T
Q  219 cttggaa 225  Q
    |||||||    
T  47749226 cttggaa 47749232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 3507544 - 3507641
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || |||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||| ||||||||| ||  ||||| |||||||||||    
T  3507544 gtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtatt 3507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 29128015 - 29127898
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||||||||||||||||  ||  |||||||||||||||||||| ||||| ||||||| |||||  ||||||||||| ||||      
T  29128015 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattcc 29127916  T
Q  208 ccggatacatccttggaa 225  Q
    || ||||| |||||||||    
T  29127915 ccagatacgtccttggaa 29127898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 49082906 - 49082797
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcctt 221  Q
    ||||||||| |||||||| |||||| | ||||| |||||||||||||| ||||||||||| ||||| ||||||||| |||||||  |||||||| |||||    
T  49082906 aaaggtgggtgactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtcctt 49082807  T
Q  222 ggaatgagct 231  Q
     ||| |||||    
T  49082806 agaaggagct 49082797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 7650314 - 7650226
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||||||||||  ||| |||||||| ||| || |||||||||| |||||||||||||  ||||||||||||||||    
T  7650314 ccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtatt 7650226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 26207835 - 26207935
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagc 230  Q
    |||||||||||  ||  |||||||||||||| |||||| ||||||||||||||| || |||||||||||||||||  |||| ||||||||||||| ||||    
T  26207835 cgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagc 26207934  T
Q  231 t 231  Q
    |    
T  26207935 t 26207935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 29762166 - 29762289
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||| ||||| ||||||||||   ||  || ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||      
T  29762166 gtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattcc 29762265  T
Q  208 ccggatacatccttggaatgagct 231  Q
    ||| |||||||||||||| |||||    
T  29762266 ccgaatacatccttggaaggagct 29762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 40944976 - 40944854
Alignment:
Q  110 ttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttcc 209  Q
    |||||| |||||||||||| |||||||||||| | |  ||||||||||||||  |||||  ||| ||||||||||||| ||||||||| ||||||| ||     
T  40944976 ttctgacccaccaaaggtgagcgactaatccgct-catgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctct 40944878  T
Q  210 ggatacatccttggaatgagcttc 233  Q
    |||||| ||||||||| |||||||    
T  40944877 ggatacgtccttggaaggagcttc 40944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 54261322 - 54261199
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||| |||||||  |||||||||||  ||  ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||      
T  54261322 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattcc 54261223  T
Q  208 ccggatacatccttggaatgagct 231  Q
    || | ||| ||||||||| |||||    
T  54261222 ccaggtacgtccttggaaggagct 54261199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 3136716 - 3136829
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| |||||||||||| ||  |||||||||||||||||||| ||||| |||||| ||||||| ||||||| ||||||||  |||| ||| ||    
T  3136716 accaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgtt-cccctgaaaatcgaatccggtattccccgggtacgtc 3136814  T
Q  219 cttggaatgagcttc 233  Q
    |||| || |||||||    
T  3136815 cttgaaaggagcttc 3136829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 928686 - 928573
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacat 217  Q
    ||||||||||||  ||||||||||  ||| |||||| |||||||||||||| |||| |||||||||||||||||||||| | ||||||  |  | ||| |    
T  928686 caccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattccctaggtacgt 928587  T
Q  218 ccttggaatgagct 231  Q
    ||||||||||||||    
T  928586 ccttggaatgagct 928573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 31072963 - 31072851
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||| ||| ||||| |  ||| ||||||||||||| |||||| |||||||||||||||||||  ||||||||| |||||| ||||| ||| ||    
T  31072963 accaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattctccgggtacgtc 31072864  T
Q  219 cttggaatgagct 231  Q
    |||| || |||||    
T  31072863 cttgaaaggagct 31072851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 15795522 - 15795627
Alignment:
Q  125 ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgga 224  Q
    |||||||||||||| |   ||| |||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||  |||| ||| ||||||||    
T  15795522 ggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgtt-cccctgggaatcgaactcggtattccccgggtacgtccttgga 15795620  T
Q  225 atgagct 231  Q
    | |||||    
T  15795621 aggagct 15795627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 45877527 - 45877433
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaa 225  Q
    |||||||||||  ||  ||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||  |||||||| |||||||||    
T  45877527 cgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaa 45877433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 3763144 - 3763024
Alignment:
Q  110 ttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttcc 209  Q
    |||||||| | ||| ||||| ||||||||||  |||| |||||||| ||||| ||||| |||||||||||| || ||| |||||||| ||||||||| ||    
T  3763144 ttctgatctatcaatggtggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgtt-cctctgtgaatcgaatccggtatttccc 3763046  T
Q  210 ggatacatccttggaatgagct 231  Q
    |||||| |||||| || |||||    
T  3763045 ggatacgtccttgaaaggagct 3763024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 7310714 - 7310811
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||| || ||||||||||||  ||| |||||||||||||| ||| || |||| ||||||||| ||| |||||||||||||||||    
T  7310714 gtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtatt 7310811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 47303512 - 47303617
Alignment:
Q  120 ccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcc 219  Q
    |||||||| | |||||||||||  ||  | ||||||||||| |||||| ||||| |||||||| |||| ||||| |||||| |||||||||||||| |||    
T  47303512 ccaaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtcc 47303611  T
Q  220 ttggaa 225  Q
    ||||||    
T  47303612 ttggaa 47303617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 32873571 - 32873682
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||||||||||||||| |  ||   |||||||||||| ||||||| |||||||||||| ||||  |||||||||| |||| || |||| ||| ||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggta-ttcccgggtacgtc 32873669  T
Q  219 cttggaatgagct 231  Q
    |||||||||||||    
T  32873670 cttggaatgagct 32873682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 43330743 - 43330815
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    |||| ||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||    
T  43330743 gtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 7648823 - 7648756
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctga 188  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  7648823 caaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctga 7648756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 52364851 - 52364934
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||||||||| |||||||  |||| ||| ||||||||| |||||    
T  52364851 gcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggagct 52364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 33251745 - 33251635
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcct 220  Q
    |||| |||| |||||||||||  ||  |||||||||||||| |||||||||| |||||||||| | | |||||||||||||||||  ||  |||| ||||    
T  33251745 caaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtcct 33251646  T
Q  221 tggaatgagct 231  Q
    ||||| |||||    
T  33251645 tggaaggagct 33251635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 26590319 - 26590368
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  26590319 gtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaaccc 26590368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 47471927 - 47471831
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||||||||| |||||||| ||  ||  ||||||| ||||||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  47471927 gtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgtt-cccctgggaatcgaacccggtatt 47471831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 3755655 - 3755543
Alignment:
Q  119 accaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatc 218  Q
    ||||||||| | |||||||||||  ||  |||||||| |||||||||||| ||| ||||||||| |||| ||||||||  |||||||  |||||||| ||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtc 3755556  T
Q  219 cttggaatgagct 231  Q
    |||| || |||||    
T  3755555 cttgaaaagagct 3755543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 4638236 - 4638160
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||||| |||||||||  ||| ||||||||| ||||||||||| ||||||||||| | |||| ||||||||||    
T  4638236 aaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 23511650 - 23511566
Alignment:
Q  121 caaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||| ||| |||||||| ||  ||||||||||||||||||||| ||| ||||| ||||| || |||||||||||| ||||    
T  23511650 caaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaacccgatatt 23511566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 7612987 - 7613034
Alignment:
Q  158 atgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtatt 7613034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 41219682 - 41219599
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaac 197  Q
    ||||||||||||||| | || ||||||   ||| ||| |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  41219682 gatccaccaaaggtgagtgattaatccagctcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaac 41219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 55069690 - 55069765
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccc 183  Q
    ||||| || |||||||||||| |||| |||||||  ||| ||||||||||||| ||||||||||| ||||||||||    
T  55069690 gtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccc 55069765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 26361978 - 26362068
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    ||||| || ||| |||||||| ||||||||||||  ||| |||||||||||||| ||||| |||| ||||||||||| || ||||| ||||    
T  26361978 gtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaacc 26362068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 39849149 - 39849076
Alignment:
Q  126 gtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    ||||||||||||||||  ||  |||||||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgtt-cctctgggaatcgaacccg 39849076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 54237504 - 54237430
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttg 222  Q
    |||||||| ||||||||||| ||||| ||||||| |||||| |||||| |||| ||||| |||||||| ||||||    
T  54237504 gcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcgaccccgatatttcccggatacgtccttg 54237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 8362673 - 8362576
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| ||||||| |||||||| ||||||||  |  ||  ||||||||||||||| ||||||||| ||||||| || ||| |||| ||||||||||||    
T  8362673 gtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtatt 8362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 24506659 - 24506751
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccgg 201  Q
    ||||| || ||||||| |||| |||||||||| || ||  ||||||||||||| ||||||| |||||||||||  |||||| ||||||||||||    
T  24506659 gtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtt-tccctgaaaatcgaacccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 28242352 - 28242251
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgag 229  Q
    ||||||||||||  ||  || |||||||||| ||||||||||| | ||||||| ||||  |||| ||||||||||| ||||||||| || |||||| |||    
T  28242352 gcgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggag 28242253  T
Q  230 ct 231  Q
    ||    
T  28242252 ct 28242251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 35998582 - 35998698
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    |||||||| |||| |||||||| ||| |||||| | ||| ||||||||||||| ||||||  ||||||||||| |||  || |||| ||||||||||| |    
T  35998582 gtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtttccctcga-aatcaaacccggtattct 35998680  T
Q  208 ccggatacatccttggaa 225  Q
    |||| ||| || ||||||    
T  35998681 ccgggtacgtctttggaa 35998698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 40660347 - 40660444
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggata 214  Q
    ||||||||||||   || ||||||| |||  |||||||||||||||||||| ||||  |||||||| |||  |||||||| ||||||||| |||||||    
T  40660347 ccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccggtatttcccggata 40660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 19147057 - 19146969
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||| || ||||||||||||| ||||||||||   ||| || |||||| || | |||||||||||||||||||| ||||| |||||||    
T  19147057 gtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaatcgaa 19146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 45402361 - 45402473
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| || |||| |||||||  |||||||||||  ||  |||||||||||||||||| |||| || ||||||||| ||  |||||||||||| ||||     
T  45402361 agtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattc 45402460  T
Q  207 tccggatacatcc 219  Q
     |||| |||||||    
T  45402461 cccgggtacatcc 45402473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 46529924 - 46529978
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||| ||||||| |||| ||||| || |||||||||||||||||||||    
T  46529924 tagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtatt 46529978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 22909884 - 22909772
Alignment:
Q  103 cactagtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggt 202  Q
    |||| ||||| || ||| ||||||||  |||||||| ||  ||  ||||||| | ||||||||| ||| ||||||||||| | ||||||||||||||| |    
T  22909884 cactggtttccgacccatcaaaggtgcacgactaattcggctcatgcgtagaagtatgcgcactagcctagcgttgttcctc-tgagaatcgaacccgat 22909786  T
Q  203 attttccggataca 216  Q
    ||| ||||||||||    
T  22909785 attctccggataca 22909772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 30735018 - 30735079
Alignment:
Q  170 caagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||||||||||||||| |||||||  |||  | | |||||||||||||||    
T  30735018 caagcgttgttccccctgagaatcgaactcggtattccccgagtgcgtccttggaatgagct 30735079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 34374453 - 34374533
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctga 188  Q
    ||||| || |||||||||  ||||||||||||||| |   |||| ||||||||||||||| ||||| |||||| |||||||    
T  34374453 gtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtttcccctga 34374533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 44064640 - 44064584
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgca 164  Q
    ||||| || |||||||||||| |||||||||||| |||  |||||||||||||||||    
T  44064640 gtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgcgca 44064584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 2668148 - 2668085
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    |||| ||||||| |||||||||||   ||  |||||||||||||||||||||||||| ||||||    
T  2668148 ccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaagtgttgtt 2668085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 33689007 - 33688932
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttgg 223  Q
    |||||||||||||||||||||||||| ||| |||||| |  |||| ||||||| ||||  || ||||| |||||||    
T  33689007 gcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccgatattcccccgatacgtccttgg 33688932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 45450498 - 45450579
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||| ||||| ||||| ||||||  |||| ||||| ||||| | ||||||| | |||||||||||||    
T  45450498 gcgtagaggcatgcgcactggtcaagcattgtt-cccctggaaatcaaacccagtattctacggatacgt-cttggaatgagct 45450579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 13167497 - 13167551
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||| |||||||||||||||||||||   || |||||||||||| ||||    
T  13167497 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatatt 13167551  T

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Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 38394189 - 38394301
Alignment:
Q  111 tctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccg 210  Q
    ||||| ||||||  |||||| ||||||||||  ||  |||||||  ||| ||||||| || ||||||||| ||||||||||||||| |||||||| | |     
T  38394189 tctgacccaccactggtgggtgactaatccggctcatgcgtagaaacatacgcactg-ccgagcgttgtttcccctgagaatcgaa-ccggtattcttca 38394286  T
Q  211 gatacatccttggaa 225  Q
    ||||| |||||||||    
T  38394287 gatacgtccttggaa 38394301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 50682522 - 50682448
Alignment:
Q  159 tgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagcttc 233  Q
    ||||||||||||||||||||||| ||||   ||||||||||  ||||||||| |||| || || ||| |||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccctatattttccgaatacgtcattcgaaggagcttc 50682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 5549346 - 5549270
Alignment:
Q  154 aggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||| ||| ||||||||||||   |||  |||||||||| |||||  || |||||||||||||||||||||    
T  5549346 aggcatgcgcattggtcaagcgttgttcttactggaaatcgaacccagtattc-cctgatacatccttggaatgagct 5549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 22405564 - 22405661
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    |||||||| ||| ||| |||||||  ||| || || |||||| |||| |||  |||||||||||| ||||||||| ||| |||||||||  |||||||    
T  22405564 caccaaagatggacgattaatccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctgagaatagaatccggtatttcacggatac 22405661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 19873420 - 19873388
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttcc 182  Q
    ||||||||||||||||||||||||| |||||||    
T  19873420 gtagaggcatgcgcactggccaagcattgttcc 19873388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 41223089 - 41223140
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccg 200  Q
    ||||||||||||||||| ||||||| |||||||  |||||| |||||||||||    
T  41223089 gcgtagaggcatgcgcattggccaaacgttgtt-tccctgataatcgaacccg 41223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 49021214 - 49021274
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactgg 168  Q
    ||||| || ||||||| ||||| |||||||||||  ||  |||||||||||||||||||||    
T  49021214 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 68604 - 68493
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||   ||||||||||||||||||| |||||||||||| ||||| |||| |||     
T  68604 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacg 68508  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  68507 tccttggaaggagct 68493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 6954 - 6857
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || |||||||||||| ||||||||||||  ||  |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  6954 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 155730 - 155809
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  155730 ccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 25794 - 25884
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacc 198  Q
    |||||||| |||  ||||||||| |||||||| | |||  |||||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  25794 gtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaacc 25884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 8710 - 8808
Alignment:
Q  107 agtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||| || ||||||||||||| ||||||||||   ||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  8710 agtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 271103 - 271207
Alignment:
Q  127 tgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaat 226  Q
    ||||||||||| |||  ||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||| ||| |||||||||     
T  271103 tgggcgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaag 271202  T
Q  227 gagct 231  Q
    |||||    
T  271203 gagct 271207  T

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Target: scaffold0005; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 249337 - 249412
Alignment:
Q  130 gcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||| ||| ||||||||| ||| ||||||| |||||||| ||| |||||||||||||||| ||||||    
T  249337 gcgactaatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtatt 249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 219462 - 219404
Alignment:
Q  114 gatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    |||||| ||||||||| ||||||||||  |||| |||||||||||||||||||||||||    
T  219462 gatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 219404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 250044 - 250099
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaa 172  Q
    |||||||||| | ||||||||||||  ||| |||||||||||||||||||||||||    
T  250044 ccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 250099  T

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Target: scaffold0209 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 12672 - 12576
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattt 206  Q
    |||||| ||||| |||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||  ||||  ||||||||||||||||||    
T  12672 gtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt--ccctaggaatcgaacccggtattt 12576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 7845 - 7961
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| |||||||||||||||||||||||||||   |   |||||||||||||||||||||||||| ||| |||||| || ||||| |||||||||||      
T  7845 gtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattcc 7944  T
Q  208 ccggatacatccttgga 224  Q
    |||| ||| ||||||||    
T  7945 ccgggtacgtccttgga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 94999 - 95063
Alignment:
Q  117 ccaccaaa-ggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgtt 180  Q
    |||||||| |||||||||||||||||  ||  ||||| ||||||||||||||| ||| |||||||    
T  94999 ccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt 95063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 41133 - 41046
Alignment:
Q  118 caccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||| |||||||||||||||  ||| |||||||||||||| ||||| ||||| |||||||||| ||||||||||||||| ||||    
T  41133 caccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatatt 41046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 319512 - 319398
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggataca 216  Q
    ||||||||||||| ||||||||||   ||  || |||||| |||||||||||||||||||||||||||||   |||| |||||||||||  ||||||||     
T  319512 ccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccggatacg 319413  T
Q  217 tccttggaatgagct 231  Q
    ||||||||| |||||    
T  319412 tccttggaaggagct 319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 669 - 546
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || |||||||||||| |||||||||| |  ||   ||||||||||||| |||||  |||| ||||||||||||| |||||||||||||||||      
T  669 gtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattcc 570  T
Q  208 ccggatacatccttggaatgagct 231  Q
    |||| ||| ||||||||| |||||    
T  569 ccgggtacgtccttggaaggagct 546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 412091 - 412159
Alignment:
Q  163 cactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||  |||||||| ||||||||| |||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagct 412159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 139491 - 139437
Alignment:
Q  151 tagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||| |||||||||||||||||||||   || |||||||||||| ||||    
T  139491 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatatt 139437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 18691 - 18608
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||| |||| |||||||||||||||||||||||||  |||||||||||||| || | ||| ||||||||||||| |||||    
T  18691 gcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagct 18608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 26264 - 26185
Alignment:
Q  126 gtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||| |||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||    
T  26264 gtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtatt 26185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 8231 - 8151
Alignment:
Q  150 gtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||  |||| ||| ||||||||| |||||    
T  8231 gtagaggcatgcgcactggccaagcgttgtt-cccttgggaatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

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Target: scaffold0009 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 42842 - 42939
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || |||||||||||||||||||||||||  ||  | |||||||||||||||||| |||||| |||||| ||||  |||||||||||| ||||    
T  42842 gtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaacccgatatt 42939  T

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Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 9479 - 9438
Alignment:
Q  164 actggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtatt 9438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 1633 - 1721
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||||||||||||||||||||  |  ||  |||||||||||||||||||||| || ||||||||||||||  ||||||||| ||||||    
T  1633 ccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtatt 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 149484 - 149396
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    |||||||| ||||||  |||||||||||||||    |||  ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  149484 gtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttccccctgagaatcgaa 149396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 16969 - 16887
Alignment:
Q  117 ccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaaccc 199  Q
    |||||||||||| |||||||||| |  ||| |||||||| ||| ||||||| |||||||||||| ||||||||||| ||||||    
T  16969 ccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaaccc 16887  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 51826 - 51735
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggta 203  Q
    ||||| |||||| ||||||||||||||| |||||  ||| ||    || ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  51826 gtttcagatccatcaaaggtgggcgactgatccggctcgtgc----agacatgcgcactggccaagcgttgttccctctgggaatcgaacccggta 51735  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 72686 - 72609
Alignment:
Q  153 gaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatccttggaatgagct 231  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||| || || ||||| ||||||||| |||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggta-ttccctgatacgtccttggaaggagct 72609  T

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Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 6071 - 5975
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatt 205  Q
    ||||| || ||||||| ||||| |||||||| ||  ||  ||||||||||||| ||||||||||||||||| ||||||||  |||||||||| |||||    
T  6071 gtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagtatt 5975  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 224416 - 224303
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtatttt 207  Q
    ||||| || ||||||||| ||| |||||||||||  ||| ||||||||| ||| ||||||  ||| |||| ||| |||||||| ||||||||| |||| |    
T  224416 gtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaacccgatattct 224317  T
Q  208 ccggatacatcctt 221  Q
    ||| |||| |||||    
T  224316 ccgaatacgtcctt 224303  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 186593 - 186504
Alignment:
Q  131 cgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatacatcctt 221  Q
    |||||||||||  ||| ||||||||||||| |||||| |||| | || ||| |||||| ||||||||||| |||| |||  ||||||||||    
T  186593 cgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattctccctga-aatcgaacccgatattctccaaatacatcctt 186504  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 17489 - 17401
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaa 196  Q
    ||||| || ||| ||| |||||||||||||||||  ||| | ||||| ||||||||||||| ||||| || || |||||||||||||||    
T  17489 gtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttcccctgagaatcgaa 17401  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 25184 - 25108
Alignment:
Q  108 gtttctgatccaccaaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    ||||| |||||||||||||||| ||| ||||| |||||  |||||||  ||||||||||| ||||  ||||||||||    
T  25184 gtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactgtccaaatgttgttcccc 25108  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 65202 - 65238
Alignment:
Q  148 gcgtagaggcatgcgcactggccaagcgttgttcccc 184  Q
    |||||||| ||||||||||||||||||||||||||||    
T  65202 gcgtagagacatgcgcactggccaagcgttgttcccc 65238  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 2114 - 2207
Alignment:
Q  122 aaaggtgggcgactaatccgattcgagcgtagaggcatgcgcactggccaagcgttgttccccctgagaatcgaacccggtattttccggatac 215  Q
    |||||||| |||||||||||| |   || |||| |||||||| ||   |||||||||||||  |||||||||||| |||||||||  |||||||    
T  2114 aaaggtggacgactaatccgacttatgcatagaagcatgcgcgctaatcaagcgttgttccttctgagaatcgaatccggtatttctcggatac 2207  T

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