View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_low_54 (Length: 239)
Name: NF10167_low_54
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_low_54 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4408781 - 4408556
Alignment:
| Q |
1 |
aaaataccagatgacctatattatgtaaaaaagttatacaagtagagtatttggaaagagacgttgataattctttatta---atatataattgtaatga |
97 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
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| T |
4408781 |
aaaataccagatgacctatattatgtaaaaaagttatacaagtagagtatttggaaagagacgttgataattctttattactaatatataattgtaaaga |
4408682 |
T |
|
| Q |
98 |
taatgatctcgaagaaagtaaaaatagtgttgtgtattttatgtgaaagagcttgctttcaaaattttcacaagatgctatctaatattgcggtcttaca |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4408681 |
taatgatctcgaagaaagtaaaaatagtgttgtgtattttatgtgaaagagcttgctttcaaaattttcacaagatgctatctaatattgcggtcttaca |
4408582 |
T |
|
| Q |
198 |
aaaataactagcttgaaacttattaa |
223 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
4408581 |
aaaataactagcttgaaacttattaa |
4408556 |
T |
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