View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10167_low_55 (Length: 239)

Name: NF10167_low_55
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10167_low_55
NF10167_low_55
[»] chr7 (41 HSPs)
chr7 (1-223)||(31377468-31377690)
chr7 (1-223)||(27595436-27595658)
chr7 (1-223)||(21441762-21441984)
chr7 (2-223)||(10227962-10228183)
chr7 (9-223)||(2940923-2941137)
chr7 (17-223)||(23670950-23671156)
chr7 (1-223)||(41902637-41902859)
chr7 (2-223)||(13391158-13391379)
chr7 (1-223)||(45470160-45470382)
chr7 (2-223)||(46191467-46191688)
chr7 (17-223)||(2196163-2196369)
chr7 (1-228)||(5667179-5667407)
chr7 (1-223)||(32584921-32585136)
chr7 (17-223)||(15757449-15757655)
chr7 (1-223)||(43595972-43596196)
chr7 (1-196)||(41631393-41631588)
chr7 (1-223)||(43341282-43341504)
chr7 (22-223)||(48829263-48829464)
chr7 (1-223)||(21806603-21806813)
chr7 (1-196)||(44848119-44848302)
chr7 (77-212)||(28489363-28489498)
chr7 (65-212)||(34002603-34002749)
chr7 (1-142)||(44409926-44410066)
chr7 (2-111)||(12419065-12419174)
chr7 (1-134)||(33450136-33450269)
chr7 (8-83)||(11410631-11410706)
chr7 (76-147)||(35709775-35709846)
chr7 (8-83)||(2732400-2732475)
chr7 (3-70)||(15943071-15943138)
chr7 (13-84)||(31673653-31673724)
chr7 (18-83)||(37807078-37807143)
chr7 (2-83)||(41892227-41892308)
chr7 (23-83)||(1411461-1411521)
chr7 (174-222)||(35709749-35709797)
chr7 (17-90)||(35516435-35516513)
chr7 (2-83)||(8485847-8485928)
chr7 (3-83)||(48214168-48214248)
chr7 (19-78)||(26574140-26574199)
chr7 (22-83)||(4067978-4068039)
chr7 (18-62)||(18533324-18533368)
chr7 (8-60)||(34521206-34521258)
[»] chr8 (33 HSPs)
chr8 (1-223)||(38600626-38600848)
chr8 (1-223)||(24580544-24580766)
chr8 (1-223)||(32983000-32983222)
chr8 (1-223)||(14921469-14921691)
chr8 (1-196)||(41478256-41478451)
chr8 (9-223)||(7960350-7960564)
chr8 (1-223)||(16364780-16365002)
chr8 (18-223)||(7382970-7383175)
chr8 (3-223)||(44710181-44710401)
chr8 (22-223)||(23444507-23444708)
chr8 (2-223)||(40680453-40680674)
chr8 (1-183)||(8000119-8000301)
chr8 (1-183)||(35056282-35056464)
chr8 (17-223)||(44755622-44755840)
chr8 (25-223)||(13450803-13451001)
chr8 (17-111)||(41478586-41478680)
chr8 (1-169)||(4376994-4377162)
chr8 (3-140)||(12638090-12638226)
chr8 (74-180)||(40860835-40860940)
chr8 (1-205)||(39506442-39506650)
chr8 (78-212)||(2121002-2121136)
chr8 (1-134)||(26106480-26106613)
chr8 (65-212)||(4158186-4158333)
chr8 (8-70)||(11989139-11989201)
chr8 (3-83)||(36054582-36054662)
chr8 (3-70)||(16383884-16383951)
chr8 (3-70)||(26241372-26241439)
chr8 (8-83)||(36684782-36684857)
chr8 (17-90)||(31519253-31519326)
chr8 (3-83)||(7323130-7323210)
chr8 (19-70)||(30577127-30577178)
chr8 (3-68)||(10921173-10921237)
chr8 (17-98)||(12939282-12939363)
[»] chr4 (40 HSPs)
chr4 (1-223)||(46903692-46903914)
chr4 (1-223)||(4422163-4422385)
chr4 (1-223)||(42431556-42431778)
chr4 (1-223)||(29590270-29590492)
chr4 (1-223)||(17981098-17981320)
chr4 (1-223)||(33239738-33239960)
chr4 (13-223)||(49389547-49389757)
chr4 (1-223)||(12582202-12582424)
chr4 (2-223)||(3095313-3095534)
chr4 (64-223)||(35041641-35041800)
chr4 (17-223)||(50636974-50637180)
chr4 (22-223)||(5258844-5259045)
chr4 (1-223)||(20392723-20392946)
chr4 (1-223)||(31842949-31843171)
chr4 (17-223)||(45783709-45783914)
chr4 (1-212)||(48659423-48659633)
chr4 (22-223)||(34553714-34553915)
chr4 (64-223)||(22270213-22270372)
chr4 (2-212)||(29525209-29525419)
chr4 (100-223)||(36488924-36489047)
chr4 (1-223)||(517651-517861)
chr4 (3-83)||(38973687-38973767)
chr4 (8-83)||(10010807-10010882)
chr4 (8-83)||(10017948-10018023)
chr4 (8-83)||(38308012-38308087)
chr4 (16-98)||(41487562-41487644)
chr4 (1-205)||(34432815-34433010)
chr4 (8-83)||(47691688-47691763)
chr4 (3-83)||(48801176-48801256)
chr4 (8-83)||(16711853-16711928)
chr4 (8-83)||(40730377-40730452)
chr4 (8-83)||(48826110-48826185)
chr4 (3-57)||(8753752-8753806)
chr4 (22-62)||(14599106-14599146)
chr4 (3-83)||(32212291-32212371)
chr4 (17-83)||(7363475-7363541)
chr4 (22-83)||(41324353-41324414)
chr4 (46-98)||(8946310-8946362)
chr4 (3-59)||(9627591-9627647)
chr4 (74-134)||(20484263-20484323)
[»] chr6 (29 HSPs)
chr6 (1-223)||(17156327-17156549)
chr6 (1-223)||(4174017-4174239)
chr6 (1-223)||(4229630-4229852)
chr6 (1-223)||(1101291-1101513)
chr6 (1-223)||(13041495-13041716)
chr6 (1-223)||(34858231-34858454)
chr6 (17-223)||(1558720-1558926)
chr6 (1-170)||(32187136-32187305)
chr6 (1-223)||(478978-479200)
chr6 (22-212)||(14500124-14500314)
chr6 (1-207)||(33042849-33043054)
chr6 (18-223)||(11982259-11982463)
chr6 (1-201)||(27797548-27797747)
chr6 (74-169)||(7458879-7458974)
chr6 (8-83)||(3027223-3027298)
chr6 (172-223)||(17607913-17607964)
chr6 (3-84)||(3728990-3729071)
chr6 (77-147)||(32158184-32158254)
chr6 (2-67)||(12296879-12296944)
chr6 (3-83)||(5153421-5153501)
chr6 (3-83)||(13276665-13276745)
chr6 (3-83)||(28890847-28890927)
chr6 (3-70)||(3257219-3257286)
chr6 (8-83)||(4111323-4111398)
chr6 (22-83)||(27613399-27613460)
chr6 (174-223)||(32158232-32158281)
chr6 (22-90)||(9283842-9283910)
chr6 (22-83)||(1449795-1449856)
chr6 (19-83)||(24848993-24849057)
[»] chr5 (31 HSPs)
chr5 (1-223)||(10017866-10018088)
chr5 (1-223)||(34855418-34855640)
chr5 (1-223)||(13916569-13916791)
chr5 (1-223)||(14949323-14949545)
chr5 (1-223)||(18295280-18295502)
chr5 (17-223)||(17869845-17870051)
chr5 (1-223)||(18158481-18158703)
chr5 (1-223)||(15397660-15397882)
chr5 (13-223)||(38254808-38255018)
chr5 (1-223)||(27054296-27054518)
chr5 (2-223)||(28210110-28210331)
chr5 (24-223)||(31624267-31624466)
chr5 (1-223)||(15677976-15678198)
chr5 (1-223)||(40084086-40084309)
chr5 (1-147)||(3880946-3881092)
chr5 (1-186)||(370259-370444)
chr5 (64-223)||(36113279-36113438)
chr5 (64-223)||(11877616-11877775)
chr5 (9-169)||(858752-858912)
chr5 (2-169)||(27332350-27332517)
chr5 (174-223)||(3880919-3880968)
chr5 (3-84)||(4049379-4049460)
chr5 (3-70)||(42062258-42062325)
chr5 (83-149)||(24427741-24427806)
chr5 (22-83)||(31271372-31271433)
chr5 (9-70)||(491340-491401)
chr5 (3-60)||(6644119-6644176)
chr5 (22-83)||(42288446-42288507)
chr5 (22-70)||(4101303-4101351)
chr5 (22-62)||(12724892-12724932)
chr5 (22-70)||(12786367-12786415)
[»] chr3 (48 HSPs)
chr3 (1-223)||(4356823-4357045)
chr3 (1-223)||(41129522-41129744)
chr3 (1-220)||(31405722-31405941)
chr3 (1-223)||(46136163-46136385)
chr3 (1-223)||(24133859-24134081)
chr3 (1-223)||(42294212-42294434)
chr3 (1-183)||(14751907-14752089)
chr3 (1-223)||(36265632-36265854)
chr3 (1-223)||(25593472-25593694)
chr3 (1-207)||(43010050-43010256)
chr3 (2-223)||(41636387-41636608)
chr3 (19-223)||(7046572-7046776)
chr3 (1-223)||(9338060-9338283)
chr3 (1-223)||(50638586-50638808)
chr3 (35-223)||(54447701-54447889)
chr3 (1-223)||(45387587-45387809)
chr3 (1-223)||(22523506-22523727)
chr3 (1-183)||(26994600-26994782)
chr3 (1-223)||(51302464-51302674)
chr3 (1-223)||(26020163-26020373)
chr3 (1-223)||(24120096-24120305)
chr3 (1-142)||(35761390-35761530)
chr3 (1-164)||(39889424-39889587)
chr3 (127-220)||(52274479-52274572)
chr3 (1-134)||(4481752-4481885)
chr3 (3-83)||(33069375-33069455)
chr3 (3-83)||(40488986-40489066)
chr3 (3-84)||(20647735-20647816)
chr3 (3-84)||(34422606-34422687)
chr3 (3-83)||(25536941-25537021)
chr3 (3-83)||(1782625-1782705)
chr3 (3-83)||(28793753-28793833)
chr3 (3-83)||(33249517-33249597)
chr3 (3-83)||(52174746-52174826)
chr3 (3-70)||(34705263-34705330)
chr3 (18-83)||(55008211-55008276)
chr3 (3-83)||(40000474-40000554)
chr3 (3-83)||(40000720-40000800)
chr3 (3-83)||(47597025-47597105)
chr3 (8-83)||(39391160-39391235)
chr3 (3-83)||(41873487-41873567)
chr3 (23-83)||(46068111-46068171)
chr3 (26-98)||(53002269-53002341)
chr3 (3-83)||(54650546-54650626)
chr3 (33-88)||(34636450-34636505)
chr3 (42-84)||(33370532-33370574)
chr3 (42-70)||(18984186-18984214)
chr3 (22-98)||(46116541-46116617)
[»] chr1 (53 HSPs)
chr1 (1-223)||(10805120-10805342)
chr1 (1-223)||(23555849-23556071)
chr1 (1-223)||(10312093-10312315)
chr1 (1-223)||(15321697-15321919)
chr1 (1-223)||(34049802-34050028)
chr1 (1-223)||(38671931-38672153)
chr1 (1-223)||(18342661-18342883)
chr1 (1-223)||(5499759-5499981)
chr1 (1-223)||(12298237-12298459)
chr1 (2-223)||(15849917-15850138)
chr1 (22-223)||(16452509-16452710)
chr1 (22-223)||(16461661-16461862)
chr1 (3-232)||(47367288-47367517)
chr1 (1-223)||(39919707-39919929)
chr1 (1-223)||(19507160-19507382)
chr1 (19-223)||(44912718-44912922)
chr1 (1-223)||(17386108-17386331)
chr1 (1-223)||(29522864-29523087)
chr1 (1-223)||(5616597-5616819)
chr1 (1-223)||(13077397-13077619)
chr1 (22-223)||(27090619-27090821)
chr1 (1-183)||(42384303-42384485)
chr1 (1-212)||(42649847-42650057)
chr1 (1-223)||(26257493-26257714)
chr1 (1-223)||(44779277-44779498)
chr1 (1-184)||(5506739-5506922)
chr1 (114-223)||(37536106-37536215)
chr1 (1-223)||(6305127-6305337)
chr1 (26-211)||(7329715-7329900)
chr1 (1-205)||(46313728-46313932)
chr1 (82-217)||(18700928-18701051)
chr1 (8-90)||(31502297-31502379)
chr1 (3-88)||(44969132-44969217)
chr1 (3-83)||(8417332-8417412)
chr1 (3-83)||(52222830-52222910)
chr1 (3-70)||(19708925-19708992)
chr1 (3-70)||(33785299-33785366)
chr1 (8-83)||(39860401-39860476)
chr1 (3-61)||(31225545-31225603)
chr1 (3-83)||(6889448-6889528)
chr1 (3-83)||(6891294-6891374)
chr1 (3-83)||(46846863-46846943)
chr1 (35-98)||(31316145-31316208)
chr1 (17-83)||(3831589-3831655)
chr1 (2-83)||(13253347-13253428)
chr1 (22-83)||(45372723-45372784)
chr1 (3-67)||(31493397-31493461)
chr1 (172-223)||(5506670-5506721)
chr1 (188-223)||(42384478-42384513)
chr1 (3-61)||(50097003-50097061)
chr1 (82-164)||(24434480-24434558)
chr1 (22-83)||(32239250-32239311)
chr1 (3-83)||(17805918-17805993)
[»] chr2 (36 HSPs)
chr2 (1-223)||(6283466-6283688)
chr2 (1-223)||(7298929-7299149)
chr2 (1-223)||(35959432-35959654)
chr2 (2-223)||(29044202-29044423)
chr2 (1-223)||(2182518-2182740)
chr2 (1-223)||(25879545-25879767)
chr2 (1-223)||(2994842-2995064)
chr2 (1-223)||(29768392-29768614)
chr2 (2-223)||(22439713-22439933)
chr2 (1-221)||(6431619-6431839)
chr2 (11-223)||(1834145-1834357)
chr2 (22-223)||(2611401-2611602)
chr2 (2-223)||(44092607-44092828)
chr2 (4-223)||(6419752-6419975)
chr2 (1-223)||(31452683-31452903)
chr2 (64-223)||(38446138-38446297)
chr2 (48-223)||(26260082-26260258)
chr2 (1-147)||(42077052-42077198)
chr2 (1-192)||(12465766-12465957)
chr2 (23-212)||(38086730-38086917)
chr2 (124-223)||(45434762-45434861)
chr2 (42-183)||(17740392-17740533)
chr2 (1-223)||(42516986-42517197)
chr2 (3-83)||(18075720-18075800)
chr2 (174-223)||(42077176-42077225)
chr2 (1-117)||(43639076-43639192)
chr2 (17-118)||(15899610-15899711)
chr2 (3-83)||(12033764-12033844)
chr2 (3-83)||(29557520-29557600)
chr2 (3-83)||(38213501-38213581)
chr2 (8-83)||(34726264-34726339)
chr2 (3-70)||(40737905-40737972)
chr2 (22-83)||(43616406-43616467)
chr2 (125-205)||(18681596-18681673)
chr2 (1-55)||(38446294-38446348)
chr2 (11-83)||(21198075-21198147)
[»] scaffold0422 (1 HSPs)
scaffold0422 (1-176)||(10710-10885)
[»] scaffold0275 (1 HSPs)
scaffold0275 (48-212)||(9274-9438)
[»] scaffold0886 (1 HSPs)
scaffold0886 (1-137)||(1672-1808)
[»] scaffold0129 (1 HSPs)
scaffold0129 (3-83)||(41005-41085)
[»] scaffold0037 (1 HSPs)
scaffold0037 (8-83)||(81279-81354)
[»] scaffold0217 (1 HSPs)
scaffold0217 (2-83)||(15671-15752)
[»] scaffold0065 (1 HSPs)
scaffold0065 (3-83)||(40079-40160)
[»] scaffold0005 (1 HSPs)
scaffold0005 (22-62)||(218232-218272)
[»] scaffold0259 (1 HSPs)
scaffold0259 (22-70)||(24901-24949)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 31377468 - 31377690
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31377468 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggtcatcaaatagttcatttgg 31377567  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31377568 cctactaaataaactaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 31377667  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  31377668 acaaagcctatttagggactaat 31377690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27595658 - 27595436
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  27595658 gtttttctaggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 27595559  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||| ||| |||||||||||||||    
T  27595558 cctactaaataggttaaacatgtcttaaagcctacttaaaattctatttcactacaagtaaatttcaactagattaaagcttacataaaagcctataaca 27595459  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  27595458 acaaagcctattaagggactaat 27595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21441984 - 21441762
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| ||||||  |||||||| ||||||| |||||||||||||||||||    
T  21441984 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggtctacttcacattaaggccatcaaatagttcatttgg 21441885  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  21441884 cctactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 21441785  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  21441784 acaaagcctattaagggactaat 21441762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 10227962 - 10228183
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| ||| |||| || ||||||||||||||||||| |||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||    
T  10227962 tttttctaggcatgacttggcctatttaaaagtctggactggcctgaaagcctacttacaggactacttcacattaaggtcatcaaatagttcatttggc 10228061  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||| |||| ||||||||||||||||    
T  10228062 ctactaaataggctaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagtctacataaaagcctataacaa 10228161  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  10228162 caaagcctattaagggactaat 10228183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 2941137 - 2940923
Alignment:
Q  9 tggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaa 108  Q
    ||||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  2941137 tggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttggcctactaa 2941038  T
Q  109 ataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcc 208  Q
    ||| | |||||||| | ||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  2941037 ataggttaaacatgtcctaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcc 2940938  T
Q  209 tatttagggactaat 223  Q
    |||||||||||||||    
T  2940937 tatttagggactaat 2940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 23671156 - 23670950
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  23671156 cctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcatattaaggttatcaaatagttcatttggcctactaaataggtta 23671057  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| |||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||    
T  23671056 aacatgtcttaaagcctacttaaaagcctatttcactacaggtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagg 23670957  T
Q  217 gactaat 223  Q
    |||||||    
T  23670956 gactaat 23670950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 41902859 - 41902637
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||| |||||||||||| ||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||     
T  41902859 gtttttctaggcctggtctggcctatttaaaagcctggactagcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttga 41902760  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  41902759 catactaaataggttaaacatgtcttaaagcctacttaaaagtctattttactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 41902660  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  41902659 acaaagcctattaagggactaat 41902637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 13391158 - 13391379
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| ||| || ||||||||||||||||| || ||| |||||||||||||| |||||| |||||| || ||||||| ||||||||||||||||||||    
T  13391158 tttttctaggcatggcctgacctatttaaaagcctagactggcctgaaagcctacttacaggcctactacacattaaggccatcaaatagttcatttggc 13391257  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||    
T  13391258 ctactaaataggttaaacatgtcttaaagcctacttaaaagactatttaactacaagtaaatttcaactagattaaagcctacataaatgcctataacaa 13391357  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  13391358 caaagcctattaagggactaat 13391379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45470382 - 45470160
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  45470382 gtttttctaggtctggcctgacctatttaaaagcctggactggccttaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttgg 45470283  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| |||||||||| |||| ||||  |||||| ||||| |||||||||||||||    
T  45470282 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtagatttcaactaaattaaatcctacataaaagcctataaca 45470183  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  45470182 acaaagcctattaagggactaat 45470160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 46191688 - 46191467
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||||  ||||||||| ||||| | ||||||||||||||||||||    
T  46191688 tttttctaggcctgacctgacctatttaaaagtctagactggcctgaaagcctacttacaagcctacttcacattaaagccatcaaatagttcatttggc 46191589  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | | || |||  |||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||| |||||||||    
T  46191588 ctactaaataggttgaatatgttttaaagcctacttaaaagcctattttactacaagtaaatttcaactagattaaagcctacataaaagtctataacaa 46191489  T
Q  202 caaagcctatttagggactaat 223  Q
    |||||| |||| ||||||||||    
T  46191488 caaagcatattaagggactaat 46191467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 2196163 - 2196369
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    ||||||||||||||||| || ||| |||||||||| ||| ||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||    
T  2196163 cctgacctatttaaaagcctagactggcctgaaagtctacttataggcctacttcacattaaggccatcaaatagttcatttggcctactaaataggtta 2196262  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    ||| || ||||||||||||||||||| |||||| ||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||    
T  2196263 aacttgtcttaaagcctacttaaaagcctatttcactacaagttaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagg 2196362  T
Q  217 gactaat 223  Q
    |||||||    
T  2196363 gactaat 2196369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 5667179 - 5667407
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||  ||||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  5667179 gtttttctaggcctggcctggtctatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 5667278  T
Q  101 cctactaaataagctaaacatgccttaaagcctactt-aaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| | ||||| |  |||||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  5667279 cctactaaataggttaaacttatcttaaagcctacttaaaaagcctatttcactacaagtaaatttcaactagattaaagcatacataaaagcctataac 5667378  T
Q  200 aacaaagcctatttagggactaattgatg 228  Q
    ||||||||||||| |||||||||| ||||    
T  5667379 aacaaagcctattaagggactaatagatg 5667407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32584921 - 32585136
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  32584921 gtttttctaggtctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 32585020  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||       ||||||| |||||||||||||||    
T  32585021 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaact-------agcctacataaaagcctataaca 32585113  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  32585114 acaaagcctattaagggactaat 32585136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 15757655 - 15757449
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| |||||||| ||| |||||| |||||||||||||| || ||| |||||| || ||||||| |||||||||||||||||||||||||||||| | ||    
T  15757655 cctggcctatttataagcctggactggcctgaaagcctacttccaggcctactacacattaaggccatcaaatagttcatttggcctactaaataggtta 15757556  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||| ||||| |||||| |||||||||||||||||||| |||    
T  15757555 aacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaaacctacataaaagtctataacaacaaagcctattaagg 15757456  T
Q  217 gactaat 223  Q
    |||||||    
T  15757455 gactaat 15757449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 43596196 - 43595972
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatatt--aaggtcatcaaatagttcattt 98  Q
    |||||||| |||||| |||| |||||||||||  |||||| |||||||||||||| |||||| ||||||||| |||  |||| |||||||||||||||||    
T  43596196 gtttttctaggcctggcctggcctatttaaaatcctggactggcctgaaagcctacttacaggcctacttcacattttaaggccatcaaatagttcattt 43596097  T
Q  99 ggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataa 198  Q
    ||||||||||||| | ||||| || ||||||||||||||||||| |||||| || |||| ||||||| |||| ||||||||||||| ||||||| |||||    
T  43596096 ggcctactaaataggttaaacttgtcttaaagcctacttaaaagcctatttcaccacaactaaatttcaactagattaaagcctacataaaagcttataa 43595997  T
Q  199 caacaaagcctatttagggactaat 223  Q
    |||||||||||||| ||||||||||    
T  43595996 caacaaagcctattaagggactaat 43595972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 41631588 - 41631393
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  41631588 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 41631489  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctat 196  Q
    ||||||||||| | |||||||| ||||||| ||||| ||||| |||||| ||||||||||||||| |||  ||||||||||||| |||||||||||    
T  41631488 cctactaaataggttaaacatgtcttaaagtctactcaaaagcctatttcactacaagtaaatttcaacaagattaaagcctacataaaagcctat 41631393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43341282 - 43341504
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||| ||  ||||||||| ||||||||||||| | ||| |||||||  || ||||||||||| | ||||||| ||||  |||||||||||||    
T  43341282 gtttttcttggcatggtctgacctatgtaaaagtctggactgacctaaaagcctgcttccagacctactttacattaaggccatcggatagttcatttgg 43341381  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||| | ||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||| || |||| ||||||||||||    
T  43341382 cctactaaataggttaaataggccttaaagcctacttaaaatcctatttcactacaagtaaattttaactagattaaagtcttcttataagcctataaca 43341481  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  43341482 acaaagcctattaagggactaat 43341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 48829263 - 48829464
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    |||||||||||| |||||| | |||||||||||| ||| ||  ||  |||| ||||| | |||||||||||||||||||||||||||||| | |||||||    
T  48829263 cctatttaaaagcctggactgacctgaaagcctacttataggtctgtttcacattaaagccatcaaatagttcatttggcctactaaataggttaaacat 48829362  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    |  ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||  |||||||||||||||||||| ||||||||    
T  48829363 gtattaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaaatctataacaacaaagcctattaagggacta 48829462  T
Q  222 at 223  Q
    ||    
T  48829463 at 48829464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21806603 - 21806813
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  21806603 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcctacttcacattaaggccatcaaatagttcatttgg 21806702  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||            |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  21806703 cctactaaataggttaaacatgtcttaaagc------------ctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 21806790  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| | ||||||||    
T  21806791 acaaagcctattaatggactaat 21806813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 44848119 - 44848302
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||            ||||| ||||||| |||||||||||||||||||    
T  44848119 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagccta------------cttcacattaaggccatcaaatagttcatttgg 44848206  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctat 196  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||    
T  44848207 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctat 44848302  T

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Target: chr7; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 28489363 - 28489498
Alignment:
Q  77 aaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggatta 176  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||| ||| |||| ||||||||||   ||||    
T  28489363 aaggtcatcaaatagttcatttgacctactaaataggctaaacatgccttaaagcctactaaaaagtttatttcacttcaagcaaattttaacaacatta 28489462  T
Q  177 aagcctacttaaaagcctataacaacaaagcctatt 212  Q
    |||||||||||||||||||| |||||||||||||||    
T  28489463 aagcctacttaaaagcctattacaacaaagcctatt 28489498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 34002749 - 34002603
Alignment:
Q  65 ctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaatt 164  Q
    |||||| | ||| ||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||||| ||| |||| |||||    
T  34002749 ctactttacatttaggccatcaaatagttcatttgacctactaaataggctaaacaggccttaaagcctacttaaaagcctatttcact-caagcaaatt 34002651  T
Q  165 ttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    |||||   ||||||||||||||||||| |  ||||||||||| |||||    
T  34002650 ttaacaacattaaagcctacttaaaagtccgtaacaacaaagtctatt 34002603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44410066 - 44409926
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||  |||||||| |||||||||||||||||| | |||||||||||| || ||| |||||||   |||||||||||||||||| |||||||     
T  44410066 gtttttcttggtttgacctgatctatttaaaagtctggactgccctgaaagcctacttccaggcctacttttcattaaggtcatcaaatag-tcatttga 44409968  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaag 142  Q
    |||||||||||  ||||||| |||||||| | ||||||||||    
T  44409967 cctactaaatagactaaacaagccttaaaacatacttaaaag 44409926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 12419174 - 12419065
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| || ||| ||||||||| || |||| ||||||||||||||||||||    
T  12419174 tttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttgcaggcctacttcacatcaaggccatcaaatagttcatttggc 12419075  T
Q  102 ctactaaata 111  Q
     |||||||||    
T  12419074 atactaaata 12419065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 33450269 - 33450136
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||||||||||||||| ||||| |||    |||||||||||||| ||  |  |||| || | |||| ||||||||||||||||||||      
T  33450269 gtttttcttggcctgacctgacctattaaaaagcctgtcttggcctgaaagcctaatttgaagcctatttaacattatggtcatcaaatagttcatttta 33450170  T
Q  101 cctactaaataagctaaacatgccttaaagccta 134  Q
    | ||||||||| |||||||| |||||||| ||||    
T  33450169 catactaaataggctaaacaggccttaaaaccta 33450136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 11410631 - 11410706
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  11410631 ttggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 11410706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 35709846 - 35709775
Alignment:
Q  76 taaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctat 147  Q
    |||| ||||||||||||||||||| | ||||||||| |||||||| | ||||||||||||||||||||||||    
T  35709846 taagatcatcaaatagttcatttgacatactaaataggctaaacaggtcttaaagcctacttaaaagtctat 35709775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 2732400 - 2732475
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  2732400 ttggcctggcctggcctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 2732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 15943138 - 15943071
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  15943138 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 15943071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 31673653 - 31673724
Alignment:
Q  13 ctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||||||| ||||||||||||||||| | ||||||||| ||||||||||| |||||||  |||||| |||||    
T  31673653 ctgacctggcctatttaaaagtctggcctggcctgaaaacctatttacaggcctacttactattaaagtcat 31673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37807078 - 37807143
Alignment:
Q  18 ctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||| ||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  37807078 ctgacctatttaaaaatctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 37807143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 41892227 - 41892308
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||| || ||||| |||| ||||||||||||||||| | ||||||||||||||||| ||| |||||||  |||||| ||||    
T  41892227 tttttttttgcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttgcaggcctacttactattaaagtca 41892308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 1411521 - 1411461
Alignment:
Q  23 ctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  1411521 ctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 1411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 35709797 - 35709749
Alignment:
Q  174 ttaaagcctacttaaaagcctataacaacaaagcctatttagggactaa 222  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  35709797 ttaaagcctacttaaaagtctataacaacaaagcatattaagggactaa 35709749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 35516513 - 35516435
Alignment:
Q  17 cctgacctatttaaaag-----tctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaata 90  Q
    |||||||||||||||||     ||||| | ||||||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  35516513 cctgacctatttaaaagcctggtctggcctggcctgaaagcctatttacaggcctactttatattaaagtcattaaata 35516435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 8485928 - 8485847
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||| || ||||| ||||||| ||||||||| |||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  8485928 tttttttttgcctggcctgacccatttaaaagcctggtctgccctgaaagcctatttacaggcctacttactattaaagtca 8485847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 48214168 - 48214248
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| ||||||||||||||||  | ||||||||| ||||||||||| ||| |||  |||||| ||||    
T  48214168 tttttttggcctggcctggcctatttaaaagtctgccctggcctgaaatcctatttacaggcctgcttactattaaagtca 48214248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 26574199 - 26574140
Alignment:
Q  19 tgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaa 78  Q
    |||||||||||||||||| | | ||||||||| |||||||||||  |||||||| |||||    
T  26574199 tgacctatttaaaagtctagtctggcctgaaaacctatttacaggtctacttcacattaa 26574140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 4067978 - 4068039
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | | |||||||||||||||||| || |||||  |||||| ||||    
T  4067978 cctatttaaaagtctggcctgacctgaaagcctatttacaaacatacttactattaaagtca 4068039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 18533368 - 18533324
Alignment:
Q  18 ctgacctatttaaaagtctggaccggcctgaaagcctatttacag 62  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||    
T  18533368 ctgacctatttaaaagcatggtctggcctgaaagcctatttacag 18533324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 34521258 - 34521206
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttac 60  Q
    |||||||| ||||||||||||||||| |||| | | |||||||||||| ||||    
T  34521258 ttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctacttac 34521206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 38600848 - 38600626
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38600848 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcatttgg 38600749  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38600748 cctactaaataaactaaacatgccttaaagcctacttaaaagcctatttaacaacaagtaaattttaactggattaaagcctacttaaaagcctataaca 38600649  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  38600648 acaaagcctatttagggactaat 38600626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24580544 - 24580766
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| ||||||||||||  ||||| |||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||||    
T  24580544 gtttttctaggcctggcctggcctatttaaaagcgtggactggcctgaaagcctacttaaagacctgcttcacattaaggtcatcaaatagttcatttgg 24580643  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  24580644 cctactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 24580743  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  24580744 acaaagcctattaagggactaat 24580766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 32983222 - 32983000
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||  ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  32983222 gtttttctaggtctggtctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 32983123  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  32983122 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 32983023  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  32983022 acaaagcctattaagggactaat 32983000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 14921469 - 14921691
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| || ||| |||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||||     
T  14921469 gtttttctaggcctggcctgacctatttaaaagcctagactggcctgaaagcctacttacatgcctacttcacattaaggtcatcaaatagttcatttga 14921568  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  14921569 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 14921668  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  14921669 acaaagcctattaagggactaat 14921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 41478451 - 41478256
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  41478451 gtttttctaagcctgacctgacctatttaaaagtctggactggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcatttgg 41478352  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctat 196  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  41478351 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaattttaactagattaaagcctacataaaagcctat 41478256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 7960564 - 7960350
Alignment:
Q  9 tggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaa 108  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  7960564 tggcctggcctgacctatttaaaagtctggactggcttgaaagcctacttatagacctacttcacattaaggtcatcaaatagttcatttcgcctactaa 7960465  T
Q  109 ataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcc 208  Q
    ||| |||||||| ||||||||||||||||| ||| || ||| |||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  7960464 ataggctaaacaagccttaaagcctacttagaagcctttttcactacaagcaaattttaactatattaaagcctacttaaaagcctatagcaacaaagcc 7960365  T
Q  209 tatttagggactaat 223  Q
    |||| ||||||||||    
T  7960364 tattaagggactaat 7960350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16365002 - 16364780
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  16365002 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttgg 16364903  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||| |||||||    
T  16364902 cctactaaataggttaaacatgtcttaaagactacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcttataaca 16364803  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| | ||||||||    
T  16364802 acaaagcctattaaaggactaat 16364780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 7383175 - 7382970
Alignment:
Q  18 ctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaa 117  Q
    ||||||||||||||||  | ||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  7383175 ctgacctatttaaaagcttagactggcctgaaagcctacaaacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataggttaa 7383076  T
Q  118 acatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttaggg 217  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  7383075 acatgtcttaaatcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcatataacaacaaagcctattaaggg 7382976  T
Q  218 actaat 223  Q
    ||||||    
T  7382975 actaat 7382970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 44710181 - 44710401
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcc 102  Q
    |||||| ||||||  ||||||||||||||||||||||| | |||||||||||| |||||  ||||||||| ||||| |||||||||||||||||||||||    
T  44710181 ttttctaggcctggtctgacctatttaaaagtctggactgccctgaaagcctacttacatgcctacttcacattaaagtcatcaaatagttcatttggcc 44710280  T
Q  103 tactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaac 202  Q
    |||||| || | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||     
T  44710281 tactaattaggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaaa 44710380  T
Q  203 aaagcctatttagggactaat 223  Q
    |||||||||| ||||||||||    
T  44710381 aaagcctattaagggactaat 44710401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 23444507 - 23444708
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    ||||||||||||||||||| |||||||||| ||| |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||| | ||||| |    
T  23444507 cctatttaaaagtctggactggcctgaaagtctacttacaggcctacttcacattaaggccatcaaatagttcatttgacctactaaataggttaaactt 23444606  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    | ||||||||||||||||||  |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  23444607 gtcttaaagcctacttaaaaacctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagggacta 23444706  T
Q  222 at 223  Q
    ||    
T  23444707 at 23444708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 40680453 - 40680674
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| ||||||||||| ||||||| |||| || ||| |||||||||| ||| |||||  ||||||| | ||||||| ||||||||||||||||||||    
T  40680453 tttttctaggcctgacctggcctatttgaaagcctagactggcctgaaagtctaattacaagcctacttaacattaaggccatcaaatagttcatttggc 40680552  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| |||||||| || ||||||||||||||||||  ||||| |||| ||||||||||||||| |||||||||||| ||||||| |||||||||    
T  40680553 ctactaaataggctaaacaagctttaaagcctacttaaaagcttatttcactataagtaaattttaactagattaaagcctaattaaaaggctataacaa 40680652  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||| ||||| ||||||||||    
T  40680653 caaagtctattaagggactaat 40680674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 8000119 - 8000301
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||||| |||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  8000119 gtttttctaggtctggcctgacttatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 8000218  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||    
T  8000219 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagccta 8000301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 35056282 - 35056464
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| | ||||||| |||||||||||||||| |||||| | |||||||||||| |||| | ||||||| | | ||||| |||||||||||||||||||    
T  35056282 gtttttttaggcctgatctgacctatttaaaagcctggactgacctgaaagcctaattacgggcctacttaacaataaggccatcaaatagttcatttgg 35056381  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||    
T  35056382 cctactaaataggctaaacaggccttaaagcctacttaaaagcctatttcactataagtaaattttaactagattaaagccta 35056464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 44755622 - 44755840
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| |||||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||    
T  44755622 cctggcctatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttggcctactaaataggtta 44755721  T
Q  117 aacatgccttaaagcctacttaaaagtctattta------------actacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaa 204  Q
    |||||| ||||||||||||||||||| |||||||            ||||||| ||||||| || | ||||||||||||| |||||||||||||||||||    
T  44755722 aacatgtcttaaagcctacttaaaagcctatttaaaagcctatttcactacaaataaatttcaattagattaaagcctacataaaagcctataacaacaa 44755821  T
Q  205 agcctatttagggactaat 223  Q
    |||||||| ||||||||||    
T  44755822 agcctattaagggactaat 44755840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 13450803 - 13451001
Alignment:
Q  25 atttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgcc 124  Q
    |||||||||| |||||  ||||||||||||| |||||   |||||||| |||||||||||||||||||||||||| ||||| ||||| |||||| | | |    
T  13450803 atttaaaagtatggacttgcctgaaagcctacttacatgtctacttcacattaaggtcatcaaatagttcatttgacctacaaaataggctaaataggtc 13450902  T
Q  125 ttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||| |||| |||||||||||||| | ||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||||| ||| ||||||    
T  13450903 ttaaaacctaattaaaagtctatttcagtacaagtaatttttaactagattaaaacctacttaaaaacctataacaacaaagtctattaaggtactaat 13451001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 41478680 - 41478586
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaata 111  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  41478680 cctgacctatttaaaagtctggactggcctgaaagcctacttaaagacctacttcacattaaggccatcaaatagttcatttggcctactaaata 41478586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4376994 - 4377162
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||||||| |||||| |||||||||| | | |||||||||||| ||  |  |||| || | |||| ||||||||||||||||||||      
T  4376994 gtttttcttggcctgacctggcctattaaaaagtctggcctgacctgaaagcctactttgaagcctatttaacattatggtcatcaaatagttcatttta 4377093  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaac 169  Q
    | ||||||||| |||||||| ||||||||||||||||||||| |||||| |||| ||  ||||||||||    
T  4377094 catactaaatatgctaaacaggccttaaagcctacttaaaagcctattttactaaaaacaaattttaac 4377162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 12638090 - 12638226
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcc 102  Q
    ||||||||||||| |||| ||| |||||||| |||||| | ||||||||||||||| ||||||||||| | ||| |||||||||||||||| ||||| ||    
T  12638090 ttttcttggcctggcctggcctgtttaaaagcctggactgacctgaaagcctattt-cagacctactttacatttaggtcatcaaatagttaatttgacc 12638188  T
Q  103 tactaaataagctaaacatgccttaaagcctacttaaa 140  Q
    ||||||||| ||||||||  |||||||| |||||||||    
T  12638189 tactaaataggctaaacaacccttaaagtctacttaaa 12638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 40860835 - 40860940
Alignment:
Q  74 attaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactgga 173  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||| | |||||||| |||||||||| |||||| | || ||||||||||||||| ||    
T  40860835 attaaggtcatcaaatagtt-atttggcctactaaataggcgaaacaagtcttaaagcatacttaaaagcctatttcagtataagtaaattttaactaga 40860933  T
Q  174 ttaaagc 180  Q
    |||||||    
T  40860934 ttaaagc 40860940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 39506650 - 39506442
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||| |||| |||| |||| | |||||||||| | |||||||||||||| ||  |  |||| || | |||| | | ||||||||||||||||      
T  39506650 gtttttcttgacctggcctggcctactaaaaagtctggtctggcctgaaagcctactttgaagcctatttaacattatgataatcaaatagttcatttta 39506551  T
Q  101 cctacta----aataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctat 196  Q
    | |||||    |||| |||||||||||||||||||||||||||||| |||||| |||| || |||||||||||   || | || ||  ||||||||||||    
T  39506550 catactaaattaataggctaaacatgccttaaagcctacttaaaagcctattttactaaaaataaattttaacaacataacaggctgtttaaaagcctat 39506451  T
Q  197 aacaacaaa 205  Q
    |||||||||    
T  39506450 aacaacaaa 39506442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 2121136 - 2121002
Alignment:
Q  78 aggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaa 177  Q
    ||||||| ||||||||||||||  |||||||||| | ||||||  | ||||  ||||||||||||||||||| ||| |||| ||||||||||   |||||    
T  2121136 aggtcattaaatagttcatttgttctactaaataggttaaacaaactttaatacctacttaaaagtctatttcactccaagcaaattttaacaacattaa 2121037  T
Q  178 agcctacttaaaagcctataacaacaaagcctatt 212  Q
    | ||||||||||| | | |||||||||||||||||    
T  2121036 aacctacttaaaatcttgtaacaacaaagcctatt 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26106480 - 26106613
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| ||| |||| |||||| |||||||||| |  ||||||||||||| ||  |  |||| || |||||| ||||||||||||||||||||      
T  26106480 gtttttcttggtctggcctggcctattaaaaagtctggcctagcctgaaagcctaatttgaagcctatttaatattatggtcatcaaatagttcatttta 26106579  T
Q  101 cctactaaataagctaaacatgccttaaagccta 134  Q
    | ||||||||| |||||| | |||||||||||||    
T  26106580 catactaaataggctaaataggccttaaagccta 26106613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 4158186 - 4158333
Alignment:
Q  65 ctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaatt 164  Q
    |||||| | ||||| |||||||||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||   | |||  || |||| |||||    
T  4158186 ctactttacattaaagtcatcaaatagttcatttgacatactaaataggctaaacatgtcgtaaagcctacttaaaaacatgtttcgctgcaagcaaatt 4158285  T
Q  165 ttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    ||||    |||||||| | ||||||||| ||||| ||||||| |||||    
T  4158286 ttaagaacattaaagcatgcttaaaagcatataaaaacaaagtctatt 4158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 11989139 - 11989201
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||||||| |||||||||||||||| ||||| | ||||||||||||||||||||| |||||||    
T  11989139 ttggcctggcctgacctatttaaaattctggcctggcctgaaagcctatttacaggcctactt 11989201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 36054662 - 36054582
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||| ||| |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  36054662 tttttttggtctggcctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 36054582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 16383951 - 16383884
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  16383951 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 16383884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 26241372 - 26241439
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  26241372 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 26241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 36684782 - 36684857
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  36684782 ttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 36684857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 31519253 - 31519326
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaata 90  Q
    |||||| ||||||||||||||| |  |||||||||||||||||||| |||||||  |||||| ||||| |||||    
T  31519253 cctgacttatttaaaagtctggcctagcctgaaagcctatttacaggcctacttattattaaagtcattaaata 31519326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 7323210 - 7323130
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||| |||| |||| |||||||||| |||||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  7323210 tttttttgacctgtcctggcctatttaaatgtctggcctgacctgaaagcctatttacaggcctacttactattaaagtca 7323130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 30577127 - 30577178
Alignment:
Q  19 tgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    ||||||||||||||| |||| | |||||||||||||||||| || |||||||    
T  30577127 tgacctatttaaaagcctggcctggcctgaaagcctatttagaggcctactt 30577178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10921173 - 10921237
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctac 68  Q
    |||| |||||||| |||| |||||||| ||| ||||||  |||||||||||||||||||| |||||    
T  10921173 tttttttggcctggcctggcctatttacaag-ctggactagcctgaaagcctatttacaggcctac 10921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 12939282 - 12939363
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    ||||| |||||||||||||||    | ||||||| ||||| |||| |||||||||| ||||| ||||| ||||| |||||||    
T  12939282 cctgatctatttaaaagtctgacatgacctgaaaacctatatacaaacctacttcacattaaagtcattaaataattcattt 12939363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46903914 - 46903692
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||    
T  46903914 gtttttcttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcatttgg 46903815  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46903814 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctataaca 46903715  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  46903714 acaaagcctatttagggactaat 46903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4422163 - 4422385
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| || ||||||| |||||||||||||||||||||||| ||||    
T  4422163 gtttttcttggcctgatctgacctatttaaaagtctggactggcctgcaagcctacttataggcctactttatattaaggtcatcaaatagttcacttgg 4422262  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  4422263 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaactgcaagtaaattttaactagattaaagcatacttaaaagcctataaca 4422362  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||||| ||||||||    
T  4422363 acaaagtctatttaaggactaat 4422385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 42431778 - 42431556
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| | ||||| ||| ||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  42431778 gtttttctagtcctgatctggcctatttaaaagtctggactggcctgaaagcctacttacaggtctacttcatattaaggtcatcaaatagttcatttgg 42431679  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  42431678 cctactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaacaagattaaagcctacataaaagcctataaca 42431579  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||||| |||| ||||||||||    
T  42431578 acaaagcatattaagggactaat 42431556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29590492 - 29590270
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| | |||||| ||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  29590492 gtttttttaggcctggcctgacctatttaaaagtctggactagcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttgg 29590393  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||  ||||| |||||||||    
T  29590392 catactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctatataaaaacctataaca 29590293  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  29590292 acaaagcctattaagggactaat 29590270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 17981320 - 17981098
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||    
T  17981320 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggtcatcaaatagttcatttgg 17981221  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  17981220 catactaaataggttaaacatatcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 17981121  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  17981120 acaaagcctattaagggactaat 17981098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33239738 - 33239960
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| ||||||||||||  ||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||     
T  33239738 gtttttctaggcctggcctggcctatttaaaagcttggactggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcatttga 33239837  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||| ||||| | ||||| || ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  33239838 cctacaaaataggttaaacttgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 33239937  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  33239938 acaaagcctattaagggactaat 33239960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 49389547 - 49389757
Alignment:
Q  13 ctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataa 112  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||| |||||||||||||||||     
T  49389547 ctgacctgacctatttaaaagtctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagtttatttggcctactaaatag 49389646  T
Q  113 gctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||| |||| ||||||| |||||||||||||||||||    
T  49389647 gttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagtctacataaaagcttataacaacaaagcctatt 49389746  T
Q  213 tagggactaat 223  Q
     ||||||||||    
T  49389747 aagggactaat 49389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12582202 - 12582424
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||| |||    
T  12582202 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatctgg 12582301  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| || | ||||||||| ||| |||||||||||||||    
T  12582302 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaattagattaaagcatacataaaagcctataaca 12582401  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| | ||||||||    
T  12582402 acaaagcctattaaaggactaat 12582424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 3095534 - 3095313
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| || ||| ||| ||||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  3095534 tttttctaggtctggcctaacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttggc 3095435  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  3095434 ctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaa 3095335  T
Q  202 caaagcctatttagggactaat 223  Q
     | |||| ||| ||||| ||||    
T  3095334 tagagccaattaagggattaat 3095313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 35041800 - 35041641
Alignment:
Q  64 cctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaat 163  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  35041800 cctactttatattaaggtcatcaaatagttcatttggcctattaaataagctaaacatgtcctaaagcctacttaaaagcctatttaactacaagtaaat 35041701  T
Q  164 tttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35041700 tttaactagattaaagcctacttaaaagcctataacaacaaagtctatttagggactaat 35041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 50637180 - 50636974
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| ||||||||||||  ||||| || ||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||    
T  50637180 cctggcctatttaaaagcatggactggtctgaaagcctacttacatgcctacttcacattaaggccatcaaatagttcatttggcctactaaataggtta 50637081  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||    
T  50637080 aacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagg 50636981  T
Q  217 gactaat 223  Q
    |||||||    
T  50636980 gactaat 50636974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 5258844 - 5259045
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    |||||||||||| ||||| || |||||||||||| |||||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||     
T  5258844 cctatttaaaagcctggaacgacctgaaagcctacttacagacctactttacattaaggtcatcaaatagtgcatttggcctactaaataggctaaacaa 5258943  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    ||||||||||||||||||||   ||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  5258944 gccttaaagcctacttaaaaacttatttcaatacaggtaaattttaactagattaaagcctacttaaaagcctataacaacaaagtctattaagggacta 5259043  T
Q  222 at 223  Q
    ||    
T  5259044 at 5259045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 20392946 - 20392723
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || | || ||||||||||||||||||||||| |||||||||||||| |||||  ||||||| | | ||||| |||||||||||||||||||    
T  20392946 gtttttctaggtcagatctgacctatttaaaagtctggactggcctgaaagcctaattacatgcctacttaacaataaggccatcaaatagttcatttgg 20392847  T
Q  101 cctactaaataagctaaacatgccttaaagcctactt-aaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| |||||||| || ||||||||||||| ||||| |||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  20392846 cctactaaataggctaaacaagcattaaagcctacttaaaaagcctatttcactataagtaaattttaactagattaaagcctaattaaaagcctataac 20392747  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||| ||||| ||||||||||    
T  20392746 aacaaagtctattaagggactaat 20392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 31842949 - 31843171
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||  ||||||||||||  ||||| | ||||||||| || |||||| | ||||||| ||||||| |||||||||||||||||||    
T  31842949 gtttttctaggcctggcctagcctatttaaaagcatggactgccctgaaagcttacttacaggcttacttcacattaaggccatcaaatagttcatttgg 31843048  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||  |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  31843049 cctactaaataggttaaacatgtcttaaagcctacttaaaaacctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 31843148  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  31843149 acaaagcctattaagggactaat 31843171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 45783914 - 45783709
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| ||| |||||||| |||||| |||||||||| ||| |||||  ||||||||| ||||||||||||||| |||||||||||||||||||||| | ||    
T  45783914 cctggcctgtttaaaagcctggactggcctgaaagtctacttacatgcctacttcacattaaggtcatcaaa-agttcatttggcctactaaataggtta 45783816  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||| |||    
T  45783815 aacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaatcctataacaacaaagcctattaagg 45783716  T
Q  217 gactaat 223  Q
    |||||||    
T  45783715 gactaat 45783709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 48659423 - 48659633
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||||| ||||||||||||||| |||||| |||||||||||||| |||||  ||||||| | ||||||| ||||||||||||||||||     
T  48659423 gtttttctaggcctgacttgacctatttaaaagcctggactggcctgaaagcctaattacaagcctacttgacattaaggccatcaaatagttcatttga 48659522  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| | |||||| |||||||||||| |||||| |||| ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  48659523 cctactaaataggctaaacaag-cttaaaacctacttaaaagcctatttcactataagtaaattttaactagattaaagcctaattagaagcctataaca 48659621  T
Q  201 acaaagcctatt 212  Q
    |||||| |||||    
T  48659622 acaaagtctatt 48659633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 22 - 223
Target Start/End: Complemental strand, 34553915 - 34553714
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    ||||||||||||  ||||| |||||||||||||| |||||  ||||||| | || |||  |||||||||||||||||| || |||||||| |||||||||    
T  34553915 cctatttaaaaggttggactggcctgaaagcctacttacatgcctactttacatcaagaccatcaaatagttcatttgacccactaaataggctaaacat 34553816  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||| ||||| ||||||||    
T  34553815 gccttaaagcctacttaaaagtctatttcactacaactaaattttaactagattaaagcatacttaaatgcctataacaacaaagtctattaagggacta 34553716  T
Q  222 at 223  Q
    ||    
T  34553715 at 34553714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 22270372 - 22270213
Alignment:
Q  64 cctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaat 163  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||| || |||||||| |||||| |||||||||||||    
T  22270372 cctactttatattaaggccatcaaatagttcatttgacctactaaataggctaaacaggccttaaagtctgcttaaaagcctatttcactacaagtaaat 22270273  T
Q  164 tttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||| ||||||| | |||||||||||||||||||| |||||||||| ||| ||||||    
T  22270272 tttaactagattaaaacatacttaaaagcctataacaataaagcctattaaggaactaat 22270213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 29525209 - 29525419
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||||| | ||||||| |||||||||||||||||   ||||||||||||||||| ||  ||||||| | ||||||||||||||||||||||||||      
T  29525209 tttttcttgacttgacctggcctatttaaaagtctggcttggcctgaaagcctatttccaagcctactttacattaaggtcatcaaatagttcatttgat 29525308  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | ||||||  |||||||||||||| |||||  ||||| ||| |||| ||||||||||  ||||||||  |||||||||| |||| || |    
T  29525309 ctactaaataggttaaacagaccttaaagcctactaaaaagcttatttcactgcaagcaaattttaacaagattaaagtttacttaaaagtctattacga 29525408  T
Q  202 caaagcctatt 212  Q
    |||||||||||    
T  29525409 caaagcctatt 29525419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 36488924 - 36489047
Alignment:
Q  100 gcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    |||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  36488924 gcctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataac 36489023  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||||||||| ||||||||||    
T  36489024 aacaaagcctattaagggactaat 36489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 517651 - 517861
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||  |||||||||||||||| |||||| |  ||||||| ||| |||||| ||||||||| |||||||||||| ||||||||||||||    
T  517651 gtttttctaggtctggtctgacctatttaaaagcctggactgatctgaaagtctacttacaggcctacttcacattaaggtcatcgaatagttcatttgg 517750  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||  |||            ||||||||||| ||| ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  517751 catactaaataggttaaacatatctt------------aaagtctatttcactgcaagtaaatttcaactagattaaagcctacataaaagcctataaca 517838  T
Q  201 acaaagcctatttagggactaat 223  Q
    | |||||||||| ||||||||||    
T  517839 ataaagcctattaagggactaat 517861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 38973687 - 38973767
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||||||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  38973687 tttttttggcctgacctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 38973767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 10010882 - 10010807
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  10010882 ttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 10010807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 10018023 - 10017948
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  10018023 ttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 10017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 38308087 - 38308012
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  38308087 ttggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 38308012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 41487562 - 41487644
Alignment:
Q  16 acctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||| |||||||  |||||| ||||| ||| | |||||||    
T  41487562 acctgacctatttaaaagtctagcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacatttcattt 41487644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 34433010 - 34432815
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| |||| |||||| ||||  |||| | |||||||||||||| ||  |  |||| || | |||| ||||||||||||||||||||      
T  34433010 gtttttcttggcctggcctggcctattaaaaaacctggtctggcctgaaagcctactttgaagcctatttaacattatggtcatcaaatagttcatttta 34432911  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||         | ||||||||||||||||||||| |||||| |||| ||  ||||||||||   || | || ||  ||||||||||||||||    
T  34432910 catactaaat---------aggccttaaagcctacttaaaagcctattttactaaaaacaaattttaacaacataacaggctctttaaaagcctataaca 34432820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 47691688 - 47691763
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  47691688 ttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 47691763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 48801256 - 48801176
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||  ||| |||||||||||||||||   ||||||||||||||||||||| |||||||  |||||| ||||    
T  48801256 tttttttggcctggtctgtcctatttaaaagtctggtttggcctgaaagcctatttacaggcctacttactattaaagtca 48801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 16711853 - 16711928
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| ||||||||||||||||| | | ||||||| ||||||||||| |||||||  |||||| ||||    
T  16711853 ttggcctggcctggcctatttaaaagtctggcctgacctgaaaacctatttacaggcctacttactattaaagtca 16711928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 40730452 - 40730377
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| || | | ||||||||||||||||||||| |||||||  |||||| ||||    
T  40730452 ttggcctggcctggcctatttaaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagtca 40730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 48826110 - 48826185
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| ||||||||||||||| | | |||||||||||||||||| || |||||||  |||||| ||||    
T  48826110 ttggcctggcctggcctatttaaaagtctagcctggcctgaaagcctatttataggcctacttactattaaagtca 48826185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 8753806 - 8753752
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatt 57  Q
    |||| ||||||||||||| ||||||||||||||||  | ||||||||||||||||    
T  8753806 tttttttggcctgacctggcctatttaaaagtctgatctggcctgaaagcctatt 8753752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 14599106 - 14599146
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacag 62  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  14599106 cctatttaaaagtctggcctggcctgaaagcctatttacag 14599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 32212291 - 32212371
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||| ||| ||| ||||||||||||| |||| | ||||||||||| |||| |||| |||||||  |||||| ||||    
T  32212291 ttttcttggtctggcctaacctatttaaaagcctggtctggcctgaaagcttattcacaggcctacttactattaaagtca 32212371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7363541 - 7363475
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||| |||||||||||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  7363541 cctggcctacttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtca 7363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 41324414 - 41324353
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | | |||||||||||||||||||  ||||||  |||||| ||||    
T  41324414 cctatttaaaagtctggtctgacctgaaagcctatttacagggctacttactattaaagtca 41324353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 8946362 - 8946310
Alignment:
Q  46 tgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    |||||| |||||||||| ||||||||||||||| ||||| || |||| |||||    
T  8946362 tgaaagtctatttacaggcctacttcatattaaagtcattaattagtccattt 8946310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 9627591 - 9627647
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctattta 59  Q
    |||| |||||||| |||  ||||||||||||||||| | | ||||||||||||||||    
T  9627591 tttttttggcctgccctagcctatttaaaagtctggcctgacctgaaagcctattta 9627647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 20484323 - 20484263
Alignment:
Q  74 attaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagccta 134  Q
    |||| ||||||||||||||||||||  | ||||||||| |||||||| | | |||||||||    
T  20484323 attatggtcatcaaatagttcattttacatactaaataggctaaacaggtcataaagccta 20484263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 17156327 - 17156549
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| |||  |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  17156327 gtttttcttggtctggtctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcatttgg 17156426  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17156427 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaacaacaagtaaattttaactggattaaagcctacttaaaagcctataaca 17156526  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  17156527 acaaagcctatttagggactaat 17156549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4174239 - 4174017
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| |||||| | ||||||| ||||||| |||||||||||||||||||    
T  4174239 gtttttctaggcctgacctggcctatttaaaagtctggactggcctgaaagcctaattacaggcttacttcacattaaggccatcaaatagttcatttgg 4174140  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| |||| |||||||||||||||    
T  4174139 cctactaaataggttaaacatgtcttaaagcctacttaaaagtctctttcactacaagtaaatttcaactagattaaagtctacataaaagcctataaca 4174040  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  4174039 acaaagcctattaagggactaat 4174017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4229852 - 4229630
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||||||| ||||||||||||  ||||| ||||||||| |||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  4229852 gtttttctaggcctgacctggcctatttaaaagcatggactggcctgaaatcctacttacagacctacttcacattaaggccatcaaatagttcatttgg 4229753  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  4229752 cctactaaataggttaaacatgccttaaatcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 4229653  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  4229652 acaaagtctattaagggactaat 4229630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 1101291 - 1101513
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| | |||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  1101291 gtttttttaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 1101390  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | ||||| || ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  1101391 cctactaaataggttaaacttgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 1101490  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  1101491 acaaagcctattaagggactaat 1101513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 13041716 - 13041495
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||||||||||||||||||||| |||||  |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  13041716 gtttttctaggtctgacctgacctatttaaaagcctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 13041617  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  13041616 c-tactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaatcctacataaaagcctataaca 13041518  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  13041517 acaaagcctattaagggactaat 13041495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34858231 - 34858454
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||     
T  34858231 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcatttga 34858330  T
Q  101 c-ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    | |||||||||| | |||||||| |||||||| |||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  34858331 cactactaaataggttaaacatgtcttaaagcttacttaaaaggctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataac 34858430  T
Q  200 aacaaagcctatttagggactaat 223  Q
    |||||||| |||| ||||||||||    
T  34858431 aacaaagcatattaagggactaat 34858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 1558720 - 1558926
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||| |||||||| ||| |||||| |||||||||||||| || ||| |||||| || ||||||| |||||||||||||||||||||||||||||| | ||    
T  1558720 cctggcctatttataagcctggactggcctgaaagcctacttccaggcctactacacattaaggccatcaaatagttcatttggcctactaaataggtta 1558819  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||| ||||| |||||| |||||||||||||||||||| |||    
T  1558820 aacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaaacctacataaaagtctataacaacaaagcctattaagg 1558919  T
Q  217 gactaat 223  Q
    |||||||    
T  1558920 gactaat 1558926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 32187305 - 32187136
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  32187305 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctacttcatattaaggccatcaaatagttcatttgg 32187206  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaact 170  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  32187205 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaact 32187136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 479200 - 478978
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||| ||| ||||||||||||  |||||  ||||||||||||| |||||  ||||||| | ||||||| |||||||||||||||||||    
T  479200 gtttttctaggcctgatctggcctatttaaaagcatggacttgcctgaaagcctaattacatgcctacttaacattaaggccatcaaatagttcatttgg 479101  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| || ||||||| |||||||||| |||||| |||| ||||||||||||||| ||||||||| || ||||||||||||||||    
T  479100 cctactaaataggctaaacaggctttaaagcatacttaaaagcctatttcactataagtaaattttaactagattaaagcttaattaaaagcctataaca 479001  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||| | ||||||||||    
T  479000 acaaagtctactaagggactaat 478978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 14500124 - 14500314
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    |||||||||||  |||||| || ||||||||||| ||||||  |||| ||| ||||||| |||||||||||||||||||||||||||||| | |||||||    
T  14500124 cctatttaaaaacctggactggtctgaaagcctacttacaggtctacatcacattaaggccatcaaatagttcatttggcctactaaataggttaaacat 14500223  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    | ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| ||||    
T  14500224 gtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcatatt 14500314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 33042849 - 33043054
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||  |||||||||||||| || ||||| | |||||||||||| || ||  ||||| | | ||||||| ||||||||||| ||||||     
T  33042849 gtttttcttggcctgggctgacctatttaaacgtatggactgacctgaaagcctacttccaagcctacattacattaaggccatcaaatagt-catttga 33042947  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  33042948 cctactaaataggctaaacaagccttaaagcctacttaaaagtctattttagtacaagtaaattttaactaaattaaagcctacttaaaaacctataaca 33043047  T
Q  201 acaaagc 207  Q
    |||||||    
T  33043048 acaaagc 33043054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 11982463 - 11982259
Alignment:
Q  18 ctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaa 117  Q
    |||||||||||||||| || |||  ||||||||||||| ||  || ||||||| | ||||||||||||||||||| |||||| |||||||||||||||||    
T  11982463 ctgacctatttaaaagcctagactagcctgaaagcctacttcaaggcctactttacattaaggtcatcaaatagt-catttgacctactaaataagctaa 11982365  T
Q  118 acatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttaggg 217  Q
    ||||||||||||| ||||||||||| |||||  | ||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  11982364 acatgccttaaagtctacttaaaagactattccagtacaaataaattttaactagattatagcctacttaaaagtctataacaacaaagcttattaaggg 11982265  T
Q  218 actaat 223  Q
    ||||||    
T  11982264 actaat 11982259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 27797747 - 27797548
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||  |||||| ||||||||||||| ||| | | ||||||| || || ||||| ||||| | |||||||||||| ||||||||||||      
T  27797747 gtttttcttggcctagcctgacttatttaaaagtctagactgacttgaaagcttactttcagac-tactt-acattaaggtcatctaatagttcatttta 27797650  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtcta-tttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||| ||| ||  |||  ||||||||||   |||||| ||||| ||||||| ||||||    
T  27797649 cctactaaataggctaaacaagccttaaaacctacttaaaagtctattttcaccgcaaacaaattttaacaacattaaaccctacctaaaagcatataac 27797550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 7458879 - 7458974
Alignment:
Q  74 attaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaac 169  Q
    |||| ||||||||||||||||||||  | ||||||||| |||||||| ||||||||||||||||||||| |||||| |||| ||  ||||||||||    
T  7458879 attatggtcatcaaatagttcattttacatactaaataggctaaacaggccttaaagcctacttaaaagcctattttactaaaaacaaattttaac 7458974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 3027298 - 3027223
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  3027298 ttggcctgacctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 3027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 17607964 - 17607913
Alignment:
Q  172 gattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17607964 gattaaagcctacttaaaaccctataacaacaaagcctatttagggactaat 17607913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 3729071 - 3728990
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||| |||||||| | || ||||||||||||||||| | |||||||||||||||||||||||||||||  |||||| |||||    
T  3729071 tttttttggcctggcttggcctatttaaaagtctggtctggcctgaaagcctatttacagacctacttactattaaagtcat 3728990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 32158184 - 32158254
Alignment:
Q  77 aaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctat 147  Q
    |||| ||||||||||||||||| || ||||||||||| ||||||  |||||||||||||||||||| ||||    
T  32158184 aaggccatcaaatagttcatttagcttactaaataagttaaacagaccttaaagcctacttaaaagcctat 32158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 12296944 - 12296879
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagaccta 67  Q
    ||||| || ||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||    
T  12296944 tttttttttgcctgacctaacctatttaaaagtctggcctggcctgaaagcctatttacaggccta 12296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 5153421 - 5153501
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  5153421 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 5153501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 13276665 - 13276745
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  13276665 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 13276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 28890927 - 28890847
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  28890927 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 28890847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 3257219 - 3257286
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| | || ||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  3257219 tttttttggcctggcttggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 3257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 4111398 - 4111323
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  4111398 ttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 4111323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 27613399 - 27613460
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  27613399 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 27613460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 32158232 - 32158281
Alignment:
Q  174 ttaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||||  ||||| | |||||||||||||||    
T  32158232 ttaaagcctacttaaaagcctataaggacaaaacatatttagggactaat 32158281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 9283910 - 9283842
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaata 90  Q
    ||||||||||||||||| | | |||  |||||||||||||| |||| |||||||||| ||||| |||||    
T  9283910 cctatttaaaagtctggcctgccctagaagcctatttacaggcctatttcatattaaagtcattaaata 9283842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 1449856 - 1449795
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||||||| |||| | ||||| ||||||||||||||| |||||||  |||||| ||||    
T  1449856 cctatttaaaagcctggtctggcctaaaagcctatttacaggcctacttactattaaagtca 1449795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 24848993 - 24849057
Alignment:
Q  19 tgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||| |||| | ||||| ||| ||||||||||| |||||||  |||||| ||||    
T  24848993 tgacctatttaaaagcctggcctggcctaaaaacctatttacaggcctacttactattaaagtca 24849057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10017866 - 10018088
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  10017866 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacatgcctacttcatattaaggccatcaaatagttcatttgg 10017965  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10017966 cctactaaataaactaaacatgccttaaagcctacttaaaagcctatttaacaacaagtaaattttaactggattaaagcctacttaaaagcctataaca 10018065  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  10018066 acaaagcctatttagggactaat 10018088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34855418 - 34855640
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||| ||||||    
T  34855418 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtcatcaaatagtttatttgg 34855517  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34855518 cctactaaataagctaaacatgccttaaagtctacttaaaagcttatttaactacaagtaaattttaactagattaaagcctacttaaaagcctataaca 34855617  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  34855618 acaaagcctatttagggactaat 34855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 13916791 - 13916569
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| || || |||| || |||||||||||||||||||||||||     
T  13916791 gtttttcttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttataggccgactttatgttaaggtcatcaaatagttcatttga 13916692  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  13916691 cctattaaataagctaaacatgccttaaagcctacttaaaagcctatttaactacaaataaattttaactagattaaagcctacttaaaagtctataaca 13916592  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||||||||| |||||||||||    
T  13916591 acaaagcctatctagggactaat 13916569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 14949545 - 14949323
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||  ||||||||||||||||||||||| | |||||||||||| |||||  ||||||| ||||||||| |||||||||||||||||||    
T  14949545 gtttttcttggcctggtctgacctatttaaaagtctggactgacctgaaagcctacttacatgcctactttatattaaggccatcaaatagttcatttgg 14949446  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14949445 catactaaataagctaaacatgtcttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagtctataaca 14949346  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||| ||||||    
T  14949345 acaaagcctatttaggcactaat 14949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18295280 - 18295502
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||||||||||||||||||||||  |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  18295280 gtttttctaggtctggcctgacctatttaaaagtctggattggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttgg 18295379  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  18295380 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 18295479  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||  ||||||||||    
T  18295480 acaaagcctatgaagggactaat 18295502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 17870051 - 17869845
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||    
T  17870051 cctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttggcctactaaataggtta 17869952  T
Q  117 aacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagg 216  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||    
T  17869951 aacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagg 17869852  T
Q  217 gactaat 223  Q
    |||||||    
T  17869851 gactaat 17869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18158481 - 18158703
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  18158481 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 18158580  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | ||||  |  ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  18158581 cctactaaataggttaaatttatcttaaagcctacttaaaagcctattttactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 18158680  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  18158681 acaaagcctattaagggactaat 18158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 15397660 - 15397882
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||| || |||| |||| ||||||| | |||| |||||||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  15397660 gtttttctaggcttggcctggcctagttaaaagcccggactggcctgaaagcctacttatagacctacttcacattaaggccatcaaatagttcatttgg 15397759  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  15397760 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 15397859  T
Q  201 acaaagcctatttagggactaat 223  Q
    | |||||||||| ||||||||||    
T  15397860 aaaaagcctattaagggactaat 15397882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 38254808 - 38255018
Alignment:
Q  13 ctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataa 112  Q
    |||||||| ||||||||||||  ||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||     
T  38254808 ctgacctggcctatttaaaagcttggactggcctgaaagcctacttacatgcctacttcatattaaggtcatcaaatagttcatttggcctactaaatag 38254907  T
Q  113 gctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||| |||| |||||||| |||||||||||| |||||    
T  38254908 gataaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagtctacataaaagccaataacaacaaagtctatt 38255007  T
Q  213 tagggactaat 223  Q
     ||||||||||    
T  38255008 aagggactaat 38255018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27054518 - 27054296
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||| |||||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||||   |||||||||||||||| |    
T  27054518 gtttttctaggcctggtctggcctatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaagactatcaaatagttcattttg 27054419  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  27054418 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 27054319  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  27054318 acaaagcctattaagggactaat 27054296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 28210331 - 28210110
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| || |||||| | ||||||||||||||||||| |||||||||||||| |||||| ||||||| | ||||||| |||||||| |||||||||||    
T  28210331 tttttctaggtctgaccaggcctatttaaaagtctggactggcctgaaagcctaattacaggcctacttaacattaaggccatcaaatcgttcatttggc 28210232  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| ||||||||  | ||||| |||||||||||| |||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  28210231 ctactaaataggctaaacagactttaaaacctacttaaaagcctatttcactataagtaaattttaactagattaaagcctaattaaaagcctataacaa 28210132  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||| ||||| ||||||||||    
T  28210131 caaagtctattaagggactaat 28210110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 31624267 - 31624466
Alignment:
Q  24 tatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgc 123  Q
    ||||||||||  ||||| | ||||||||| || |||||| ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||||     
T  31624267 tatttaaaagcttggactgacctgaaagcttacttacaggcctactttacattaaggtcatcaaatagttcatttggcctactaaataggttaaacatgt 31624366  T
Q  124 cttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  31624367 cttaaagcctagttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagggactaat 31624466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15678198 - 15677976
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||| ||||||||||||| |||||  ||||||||||||| |||||| | ||||||| ||||||| |||||||||||||||||||    
T  15678198 gtttttctaggtctggcctggcctatttaaaagtttggactagcctgaaagcctacttacaggcttacttcacattaaggccatcaaatagttcatttgg 15678099  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||| ||| ||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||| |||||||||    
T  15678098 cctactaaataggttaaacatgtcttaaagtctatttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaaacctataaca 15677999  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||||||||||  |||||||||    
T  15677998 acaaagcctattaggggactaat 15677976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 40084086 - 40084309
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||  ||||||||||| |||||  |||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||     
T  40084086 gtttttctaggcctggcctggtctatttaaaagcctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttga 40084185  T
Q  101 cctactaaataagctaaacatgccttaaagcctactt-aaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| | ||||| |  ||||||| |||||| ||||| |||||| ||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  40084186 cctactaaataggttaaacttatcttaaagtctacttaaaaagcctatttcactacaagtaaatttcaactagattaaagcatacataaaagcctataac 40084285  T
Q  200 aacaaagcctatttagggactaat 223  Q
    |||||| |||||| ||||||||||    
T  40084286 aacaaaacctattaagggactaat 40084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3881092 - 3880946
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||  ||||||| ||||||||  |||||||||||||||||||    
T  3881092 gtttttcttggcctgacctgacctatttaaaagcctggactggcctgaaagcctacttacaagcctactttatattaagaccatcaaatagttcatttgg 3880993  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctat 147  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3880992 cctactaaataagctaaacatgtcttaaagcctacttaaaagcctat 3880946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 370259 - 370444
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||| ||| |||||||||||| |||||| |||||||||| ||| |||||| ||||||| | ||||||  |||||||||||||||||||    
T  370259 gtttttctaggcctgatctggcctatttaaaagcctggactggcctgaaagtctaattacaggcctacttaacattaagaccatcaaatagttcatttgg 370358  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctactt 186  Q
    ||||||||||| ||||||||  ||||||||||||||||||||  ||||| |||| |||||||||||||||  ||||||||||||||    
T  370359 cctactaaataggctaaacagaccttaaagcctacttaaaagcatatttcactataagtaaattttaactatattaaagcctactt 370444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 36113279 - 36113438
Alignment:
Q  64 cctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaat 163  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| | ||||| || ||||||| ||||||||||| |||||| |||||||||||||    
T  36113279 cctacttcacattaaggccatcaaatagttcatttggcctactaaataggttaaacttgtcttaaagtctacttaaaagcctatttcactacaagtaaat 36113378  T
Q  164 tttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    || |||| ||||| ||||||| |||||| |||||||||||||||||||| ||||||||||    
T  36113379 ttcaactagattatagcctacataaaagtctataacaacaaagcctattaagggactaat 36113438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 11877616 - 11877775
Alignment:
Q  64 cctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaat 163  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||| | ||||| || ||||||| ||||||||||  |||||| ||||||| |||||    
T  11877616 cctacttcacattaagaccatcaaatagttcatttggcctactaaataggttaaacttgtcttaaagtctacttaaaaacctatttcactacaaataaat 11877715  T
Q  164 tttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    || |||| ||||||||||||| |||||| |||||||||||||| ||||| ||||||||||    
T  11877716 ttcaactagattaaagcctacataaaagtctataacaacaaagtctattaagggactaat 11877775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 858752 - 858912
Alignment:
Q  9 tggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaa 108  Q
    ||||||| |||| |||||| |||||||||| |  |||||||||| || || |||||||| || | ||||| |||||||||||||| ||||  | ||||||    
T  858752 tggcctggcctggcctattaaaaagtctggtctagcctgaaagcttacttccagacctattttacattaaagtcatcaaatagtttattttacatactaa 858851  T
Q  109 ataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaac 169  Q
    |||  |||||||||||||||||| ||||||||||  ||||| |||||||| ||||||||||    
T  858852 atagactaaacatgccttaaagcatacttaaaagcttattttactacaagcaaattttaac 858912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 27332517 - 27332350
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||||||||||||||| |||||| ||||| |||| | ||||||||||||||  |  |  |||| || | |||| ||||||||||||||||||||  |    
T  27332517 tttttcttggcctgacctggcctattaaaaagcctggtctggcctgaaagcctaccttgaagcctatttaacattatggtcatcaaatagttcattttac 27332418  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaac 169  Q
     ||||||||| | |||||| ||||||||||||||||||||| |||||| |||| ||  ||||||||||    
T  27332417 atactaaataggttaaacaggccttaaagcctacttaaaagcctattttactaaaaacaaattttaac 27332350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 3880968 - 3880919
Alignment:
Q  174 ttaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3880968 ttaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 3880919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 4049460 - 4049379
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||| ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| |||||    
T  4049460 tttttttggcctgatctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcat 4049379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 42062325 - 42062258
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  42062325 tttttttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 42062258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 24427806 - 24427741
Alignment:
Q  83 atcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctattt 149  Q
    ||||||||||||||||  | ||||||||| |||||||| | ||||||||||||||||||||||||||    
T  24427806 atcaaatagttcattttacatactaaataggctaaaca-gacttaaagcctacttaaaagtctattt 24427741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 31271433 - 31271372
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  31271433 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 31271372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 491340 - 491401
Alignment:
Q  9 tggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    ||||||| |||| |||||||||||| |||  | ||||||||||||||||||||| |||||||    
T  491340 tggcctggcctggcctatttaaaagcctgacctggcctgaaagcctatttacaggcctactt 491401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 6644176 - 6644119
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttac 60  Q
    |||| |||||||| ||||||||||||||||| |||  | | |||||||||||||||||    
T  6644176 tttttttggcctggcctgacctatttaaaagcctgacctgacctgaaagcctatttac 6644119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 42288507 - 42288446
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | || |||||| ||||||||||| |||||||  |||||| ||||    
T  42288507 cctatttaaaagtctggtctggtctgaaaacctatttacaggcctacttactattaaagtca 42288446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 4101303 - 4101351
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||||||||||| |||| | ||||||||||||||||||||  |||||||    
T  4101303 cctatttaaaagcctggcctggcctgaaagcctatttacaagcctactt 4101351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 12724932 - 12724892
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacag 62  Q
    ||||| ||||||||||| | |||||||||||||||||||||    
T  12724932 cctatctaaaagtctggtctggcctgaaagcctatttacag 12724892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 12786415 - 12786367
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    ||||| ||||||||||| |  |||||||||||||||||||||| |||||    
T  12786415 cctatctaaaagtctggtctagcctgaaagcctatttacagacatactt 12786367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4357045 - 4356823
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  4357045 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcatttgg 4356946  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4356945 cctactaaataaactaaacatgccttaaagcctacttaaaatcctatttaacaacaagtaaattttaactggattaaagcctacttaaaagcctataaca 4356846  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  4356845 acaaagcctatttagggactaat 4356823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 41129744 - 41129522
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  41129744 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtcatcaaatagttcatttgg 41129645  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  41129644 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagtctacttaaaagcctataaca 41129545  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||| |||||||||||||||||    
T  41129544 acaaaacctatttagggactaat 41129522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 31405941 - 31405722
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||    
T  31405941 gtttttcttagcctggcctgacctatttaaaagcctggactagcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcatttgg 31405842  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  31405841 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactaaattaaagcctacttaaaagcctataaca 31405742  T
Q  201 acaaagcctatttagggact 220  Q
    ||||||||||||||||||||    
T  31405741 acaaagcctatttagggact 31405722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46136385 - 46136163
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||     
T  46136385 gtttttcttggcctggtctgacctatttaaaagtctggactggcctgaaagcctacttacatgcctactttatattaaggtcatcaaatagttcatttga 46136286  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  46136285 cctactaaataaactaaacatgccttaaaacttacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcatataaca 46136186  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  46136185 acaaagcctatttagggactaat 46136163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24133859 - 24134081
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| ||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  24133859 gtttttctaggtctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 24133958  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  24133959 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 24134058  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  24134059 acaaagcctattaagggactaat 24134081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 42294212 - 42294434
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| | |||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||||    
T  42294212 gtttttctaggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacagacctccttcacattaaggccatcaaatagttcatttgg 42294311  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  42294312 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 42294411  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||  ||||||||||    
T  42294412 acaaagcctatcaagggactaat 42294434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 14751907 - 14752089
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  14751907 gtttttcttggcctgacctgacctatttaaaagcctagactggcctgcaagcctacttacagacctactttatattaaggccatcaaatagttcatttgg 14752006  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  14752007 catactaaataagctaaacatgtcttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagccta 14752089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36265854 - 36265632
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||||||| |||||||||||| || ||| || ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  36265854 gtttttctaggtctgacctggcctatttaaaagcctcgactggtctgaaagtctacttacagacctacttcacattaaggtcatcaaatagttcatttgg 36265755  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||| |||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||| ||    
T  36265754 cctactaaataggttaaacatgtcttatagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctatagca 36265655  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  36265654 acaaagcctattaagggactaat 36265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25593694 - 25593472
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| | |||||| |||| ||||||||||||  | ||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||     
T  25593694 gtttttttaggcctggcctggcctatttaaaagcgtagactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttga 25593595  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  25593594 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 25593495  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  25593494 acaaagcctattaagggactaat 25593472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 43010256 - 43010050
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| ||| |||||||||||||||||||||||| | |||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||     
T  43010256 gtttttcttggtctggcctgacctatttaaaagtctggactgacctgaaagcctacttacaggactacttcaaattaaggtcatcaaatagttcatttga 43010157  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| ||||||||  |||||||  ||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43010156 cctactaaataggctaaacagaccttaaaatctacttaaaaacctatttcactacaagtaaattttaactagattaaagcctacttaaaagcctataaca 43010057  T
Q  201 acaaagc 207  Q
    |||||||    
T  43010056 acaaagc 43010050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 41636387 - 41636608
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    |||||||  ||||| |||| ||||||||||||  |||||  ||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||    
T  41636387 tttttctaagcctggcctggcctatttaaaagcttggactcgcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttggc 41636486  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| ||||||||||||||||||  |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  41636487 ctactaaataggttaaacatgtcttaaagcctacttaaaaacctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaa 41636586  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  41636587 caaagcctattaagggactaat 41636608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 7046776 - 7046572
Alignment:
Q  19 tgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaa 118  Q
    |||||||||| ||||  ||||| | |||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||    
T  7046776 tgacctatttgaaagcatggactgacctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttggcgtactaaataggttaaa 7046677  T
Q  119 catgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttaggga 218  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  7046676 catgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaatcctataacaacaaagcctattaaggga 7046577  T
Q  219 ctaat 223  Q
    |||||    
T  7046576 ctaat 7046572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9338283 - 9338060
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| | |||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  9338283 gtttttctaggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcatttgg 9338184  T
Q  101 cctact-aaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    |||||| ||||| | ||||| || ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||| || ||||||||||||||    
T  9338183 cctacttaaataggttaaacttgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagccgacataaaagcctataac 9338084  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||||||||| ||||||||||    
T  9338083 aacaaagcctattaagggactaat 9338060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 50638586 - 50638808
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||| ||||||||||||||||||| | |||||||||||| ||||   ||||||| | ||||||||||||||||||||||||||     
T  50638586 gtttttctaggcctggtctggcctatttaaaagtctggactgacctgaaagcctacttacgtgcctactttacattaaggtcatcaaatagttcatttga 50638685  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||| |||||| ||| ||||    
T  50638686 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttaactacaggtaaatttcaactagattaaagcctacataaaagtctacaaca 50638785  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  50638786 acaaagcctattaagggactaat 50638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 54447701 - 54447889
Alignment:
Q  35 ctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagccta 134  Q
    |||||| |||||||||| ||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  54447701 ctggactggcctgaaagtctacttacaggcctacttcacattaaggccatcaaatagttcatttggcctactaaataggttaaacatgtcttaaagccta 54447800  T
Q  135 cttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    |||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  54447801 cttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagtctattaagggactaat 54447889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 45387587 - 45387809
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||| | ||| |||| || |||||||||||||||| |||||||||||||| ||| || ||||||| | |||||||  ||||||||||||||||||    
T  45387587 gtttttctttgtctggcctggccgatttaaaagtctggactggcctgaaagcctacttagaggcctactttaaattaaggcaatcaaatagttcatttgg 45387686  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| ||||||||||||||||| ||||  |||||| |||||| |||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  45387687 cctactaaataggctaaacatgccttaaaacctagctaaaagcctatttcactacaagtaaattttaattagattaaggcctacttaaaagactataaca 45387786  T
Q  201 acaaagcctatttagggactaat 223  Q
    || |||| |||| ||||||||||    
T  45387787 acgaagcttattaagggactaat 45387809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 22523506 - 22523727
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||| ||||||| ||| ||||||||  ||||| |||||||||||||| || ||| ||||||| | |||||||  |||||||||| |||||||    
T  22523506 gtttttcttggcttgacctggcctctttaaaagcttggactggcctgaaagcctacttccaggcctactttacattaaggctatcaaatagt-catttgg 22523604  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| || ||| | |||| ||||||||||||| |||||||||||||||||||| | ||||||    
T  22523605 cctactaaataggcttaacaagccttaaagcctacttaaaagcctcttttagtacatgtaaattttaactagattaaagcctacttaaaagtcaataaca 22523704  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||||| |||| ||||||||||    
T  22523705 acaaagcatattaagggactaat 22523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 26994782 - 26994600
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||| ||| |||||  ||||||| | ||||||| |||||||||||||||||||    
T  26994782 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagtctaattacaagcctacttaacattaaggccatcaaatagttcatttgg 26994683  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||| || | ||||||||||||||| ||||||||||||    
T  26994682 cctactaaataggctaaacaggccttaaagcctacttaaaagcctatttcaccataagtaaattttaactagattaaagccta 26994600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 51302464 - 51302674
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| ||||||||||||||            ||||| ||||||| |||||||||||||||||||    
T  51302464 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagccta------------cttcacattaaggccatcaaatagttcatttgg 51302551  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| |||| |||||||||| |||| ||||||||||||| |||||||||||||||    
T  51302552 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactagaagtaaatttcaactagattaaagcctacataaaagcctataaca 51302651  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||||| |||| ||||||||||    
T  51302652 acaaagcatattaagggactaat 51302674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 26020373 - 26020163
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||||||||||||||||  ||||| ||||||||||||||            ||||| ||||||| ||||||||||||||| | |    
T  26020373 gtttttctaggcctggcctgacctatttaaaagcatggactggcctgaaagccta------------cttcacattaaggccatcaaatagttcatatag 26020286  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  26020285 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 26020186  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  26020185 acaaagtctattaagggactaat 26020163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 24120305 - 24120096
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||||||||||||||||||||| |||||| || ||||||||||| |||||| ||||||| | ||||||| |||||||||||||||||||    
T  24120305 gtttttctaggtctgacctgacctatttaaaagcctggactggtctgaaagcctaattacaggcctacttaacattaaggccatcaaatagttcatttgg 24120206  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| | ||||||||            |||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  24120205 cctactaaataggctaaaca-ggcttaaagc------------ctatttcactataagtaaattttaactagattaaagcctaattaaaagcctataaca 24120119  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  24120118 acaaagtctattaagggactaat 24120096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 35761530 - 35761390
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |||||||     
T  35761530 gtttttcttggcctggcctgacctatttaaaagtctggaccggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatag-tcatttga 35761432  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaag 142  Q
    ||||||||||| | |||||||| | |||||||||||||||||    
T  35761431 cctactaaataggttaaacatgtcataaagcctacttaaaag 35761390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39889424 - 39889587
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||| | |||||||||| |||||| |||||||||||||| |||||  ||||||| | ||||||| |||||||||||||||||||    
T  39889424 gtttttctaggtctggcctggcttatttaaaagcctggactggcctgaaagcctaattacaagcctacttaacattaaggccatcaaatagttcatttgg 39889523  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaatt 164  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||||| || | |||||||||    
T  39889524 cctactaaataggctaaacaggccttaaagcctacttaaaagcctatttcaccataagtaaatt 39889587  T

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Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 52274479 - 52274572
Alignment:
Q  127 aaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggact 220  Q
    ||||||||||||||||  ||||| ||| ||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  52274479 aaagcctacttaaaagcttatttcactgcaagtaaatttcaactagattaaagcctacataaaagcttataacaacaaagcctattaagggact 52274572  T

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Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4481752 - 4481885
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| |||| |||||| ||||| |||| | |||||||||||||| ||  |  |||| || | |||| ||||||||||||||||||||      
T  4481752 gtttttcttggcctggcctggcctattaaaaagcctggcctggcctgaaagcctaatttgaagcctatttaacattatggtcatcaaatagttcatttta 4481851  T
Q  101 cctactaaataagctaaacatgccttaaagccta 134  Q
    | ||||||||| |||||||| ||||| |||||||    
T  4481852 cgtactaaataggctaaacaggcctttaagccta 4481885  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 33069455 - 33069375
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||  |||||| ||||    
T  33069455 tttttttggcctgacctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctccttactattaaagtca 33069375  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 40489066 - 40488986
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  40489066 tttttttggcctgacctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 40488986  T

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Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 20647816 - 20647735
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||| |||||||| |||||||||||||||||||||| | |||||||||| |||||||||| |||||||  |||||| |||||    
T  20647816 tttttttggcctggcctgacctatttaaaagtctggcctggcctgaaagtctatttacaggcctacttactattaaagtcat 20647735  T

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Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 34422687 - 34422606
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||| |||||||| |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| |||||    
T  34422687 tttttttggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcat 34422606  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 25536941 - 25537021
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||| |||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  25536941 tttttttggcatgacctgacctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttattattaaagtca 25537021  T

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Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 1782705 - 1782625
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  1782705 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 1782625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 28793753 - 28793833
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| ||||||||||||||||| | |||||||||||||||||| || |||||||  |||||| ||||    
T  28793753 tttttttggcctggcctggcctatttaaaagtctggccaggcctgaaagcctatttataggcctacttactattaaagtca 28793833  T

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Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 33249517 - 33249597
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||  |||||||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  33249517 tttttttggcctggtctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 33249597  T

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Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 52174826 - 52174746
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  52174826 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 52174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 34705330 - 34705263
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  34705330 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 34705263  T

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Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 55008211 - 55008276
Alignment:
Q  18 ctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  55008211 ctgacctatttaaaagtttggtctggcctgaaagcctatttacaggcctacttactattaaagtca 55008276  T

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Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 40000554 - 40000474
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||| ||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  40000554 tttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 40000474  T

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Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 40000800 - 40000720
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||| ||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  40000800 tttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 40000720  T

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Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 47597105 - 47597025
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | |||||||||||||| |||||| |||||||  |||||| ||||    
T  47597105 tttttttggcctggcctggcctatttaaaagcctggtctggcctgaaagcctaattacaggcctacttactattaaagtca 47597025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 39391160 - 39391235
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | || |||||||||||||||||| |||||||  |||||| ||||    
T  39391160 ttggcctggcctggcctatttaaaagcctggcctggtctgaaagcctatttacaggcctacttactattaaagtca 39391235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 41873487 - 41873567
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||| ||| |||| ||||||||||||| ||| | |||||||||| |||||||||| |||||||  |||||| ||||    
T  41873487 tttttttggtctggcctggcctatttaaaagtatggcctggcctgaaagtctatttacaggcctacttactattaaagtca 41873567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 46068111 - 46068171
Alignment:
Q  23 ctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  46068111 ctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 46068171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 53002269 - 53002341
Alignment:
Q  26 tttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    ||||||||||||| | ||||||||||||||||||||  |||||||  |||||| ||||  ||||| |||||||    
T  53002269 tttaaaagtctggtctggcctgaaagcctatttacatgcctacttactattaaagtcactaaatatttcattt 53002341  T

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Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 54650546 - 54650626
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||| ||| |||| |||||||||||| |||  | ||||||||||||||||||||| |||||||  |||||| ||||    
T  54650546 tttttttggtctggcctggcctatttaaaagcctgccctggcctgaaagcctatttacaggcctacttactattaaagtca 54650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 34636450 - 34636505
Alignment:
Q  33 gtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaa 88  Q
    |||||| | ||||||||||||||||||||| |||||||  |||||| |||||||||    
T  34636450 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcatcaaa 34636505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 33370532 - 33370574
Alignment:
Q  42 ggcctgaaagcctatttacagacctacttcatattaaggtcat 84  Q
    |||||||||||||||||||||||||||||  |||||| |||||    
T  33370532 ggcctgaaagcctatttacagacctacttactattaaagtcat 33370574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 18984214 - 18984186
Alignment:
Q  42 ggcctgaaagcctatttacagacctactt 70  Q
    |||||||||||||||||||||||||||||    
T  18984214 ggcctgaaagcctatttacagacctactt 18984186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 46116541 - 46116617
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    |||||||||||| |||  | | |||||||||||||||||| ||||||||  |||||| ||||| ||| | |||||||    
T  46116541 cctatttaaaaggctgacctgacctgaaagcctatttacatacctacttattattaaagtcattaaacatttcattt 46116617  T

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Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10805120 - 10805342
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10805120 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcatttgg 10805219  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10805220 cctactaaataaactaaacatgccttaaagcctacttaaaaacctatttaacaacaagtaaattttaactggattaaagcctacttaaaagcctataaca 10805319  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  10805320 acaaagcctatttagggactaat 10805342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23555849 - 23556071
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||| |||||| ||| ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  23555849 gtttatcttggtctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctactttatattaaggtcatcaaatagttcatttgg 23555948  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23555949 cctactaaataagctaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctataaca 23556048  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  23556049 acaaagcctatttagggactaat 23556071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10312093 - 10312315
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||    
T  10312093 gtttttcttggcctggcctgatctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcatttgg 10312192  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  10312193 cctactaaataagctaaacatgtcttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctgtaaca 10312292  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  10312293 acaaagcctatttagggactaat 10312315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15321919 - 15321697
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| ||| ||||||||||||||||||||||||  | ||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||    
T  15321919 gtttttcttggtctggcctgacctatttaaaagtctggactagtctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcatttgg 15321820  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15321819 cttactaaataagctaaacatgtcttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagtctataaca 15321720  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||| ||||||    
T  15321719 acaaagcctatttaggcactaat 15321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34050028 - 34049802
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||  | ||||| ||||||||| |||||||||||| ||||||    
T  34050028 gttttttttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaagcatactttatattaaggccatcaaatagttgatttgg 34049929  T
Q  101 cctactaaataagc----taaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctat 196  Q
    ||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34049928 cctactaaataagcctactaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctat 34049829  T
Q  197 aacaacaaagcctatttagggactaat 223  Q
    || ||||||||||||||||||||||||    
T  34049828 aataacaaagcctatttagggactaat 34049802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 38672153 - 38671931
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  38672153 gtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 38672054  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  38672053 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 38671954  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  38671953 acaaagcctattaagggactaat 38671931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18342661 - 18342883
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  18342661 gtttttctaggcctgtcctggcctatttaaaagtctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcatttgg 18342760  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  18342761 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 18342860  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  18342861 acaaagcctattaagggactaat 18342883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5499981 - 5499759
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| | || |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  5499981 gtttttctaggcctggcttggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 5499882  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  5499881 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 5499782  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  5499781 acaaagcctattaagggactaat 5499759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12298237 - 12298459
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  12298237 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 12298336  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||   ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  12298337 cctactaaataggttaaacatgtcttaaagcctacttaaaaacttatttaactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 12298436  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  12298437 acaaagcctattaagggactaat 12298459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 15849917 - 15850138
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| || ||| ||||||||||||||||| |||||| |||||||||||||| ||||||  |||||||| ||||||| ||||||||||||||||||||    
T  15849917 tttttctaggtctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggactacttcacattaaggccatcaaatagttcatttggc 15850016  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  15850017 ctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaa 15850116  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  15850117 caaagcctattaagggactaat 15850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 16452509 - 16452710
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    ||||||||||||| ||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  16452509 cctatttaaaagtttggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttggcctactaaataggttaaacat 16452608  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    | ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  16452609 gtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagggacta 16452708  T
Q  222 at 223  Q
    ||    
T  16452709 at 16452710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 16461661 - 16461862
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    ||||||||||||| ||||| |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  16461661 cctatttaaaagtttggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttggcctactaaataggttaaacat 16461760  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    | ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  16461761 gtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagggacta 16461860  T
Q  222 at 223  Q
    ||    
T  16461861 at 16461862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 47367517 - 47367288
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcc 102  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||  |||||||||||||||||||||    
T  47367517 ttttctaggcctgacctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaagaccatcaaatagttcatttggcc 47367418  T
Q  103 tactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaac 202  Q
    ||||||||| | |||||||| |||||| |||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  47367417 tactaaataggttaaacatgtcttaaaacctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaac 47367318  T
Q  203 aaagcctatttagggactaattgatgatgt 232  Q
    |||||||||| || ||||||| || |||||    
T  47367317 aaagcctattaagagactaatagaagatgt 47367288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39919707 - 39919929
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||||||||||||||||||||||| |||||||||||||| |||||  ||||||||| ||||| | |||||||||||||||||||    
T  39919707 gtttttctaggtctggcctgacctatttaaaagtctggactggcctgaaagcctacttacatgcctacttcacattaaagccatcaaatagttcatttgg 39919806  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  39919807 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 39919906  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  39919907 acaaagtctattaagggactaat 39919929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19507160 - 19507382
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||| ||||||||||||  ||||  |||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||    
T  19507160 gtttttctaggtctggcctggcctatttaaaagcatggattggcctgaaagcccacttacagacctacttcacattaaggccatcaaatagttcatttgg 19507259  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||| |||||||    
T  19507260 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcttataaca 19507359  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  19507360 acaaagcctattaagggactaat 19507382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 44912718 - 44912922
Alignment:
Q  19 tgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaa 118  Q
    ||||||||||||||| ||||||  |||| |||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||    
T  44912718 tgacctatttaaaagcctggactagcctaaaagcctacttacatgcctacttcacattaaggtcatcaaatagttcatttggcctactaaataggttaaa 44912817  T
Q  119 catgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttaggga 218  Q
    |||| ||| ||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  44912818 catgtcttcaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaaggga 44912917  T
Q  219 ctaat 223  Q
    |||||    
T  44912918 ctaat 44912922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 17386331 - 17386108
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| ||||||||||||||||| |||||| ||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  17386331 gtttttctaggcctggcctgacctatttaaaagcctggactggcttgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcatttgg 17386232  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactac-aagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| | |||| ||| |||||||||||||||||||  ||||| ||||| |||||||||| |||| ||||||||||||| |||||| |||||||    
T  17386231 cctactaaataggttaaatatgtcttaaagcctacttaaaagcttatttcactacaaagtaaatttcaactagattaaagcctacataaaagtctataac 17386132  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||| ||||| ||||||||||    
T  17386131 aacaaagtctattaagggactaat 17386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29523087 - 29522864
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  29523087 gtttttctaggcctggtctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 29522988  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaacta-caagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    ||||||||||| | |||||||| |||||||||||||||||||  ||||| |||| ||||||||||| |||| ||||||||||||| |||||| |||||||    
T  29522987 cctactaaataggttaaacatgtcttaaagcctacttaaaagcttatttcactaccaagtaaatttcaactagattaaagcctacataaaagtctataac 29522888  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||| ||||| ||||||||||    
T  29522887 aacaaagtctattaagggactaat 29522864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 5616597 - 5616819
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||||||||||||||||||||||| ||| | |||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  5616597 gtttttctaggcctggtctgacctatttaaaagtctggactggcttaaaagcctacttacaagcctacttcacattaaggccatcaaatagttcatttgg 5616696  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||| ||||| | |||||||| ||||||||||||||||||| |||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||||||    
T  5616697 cctacaaaatacgttaaacatgtcttaaagcctacttaaaagcctatttcactacaaataaatttcaactagattaaagcctacataaaagcctataaca 5616796  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||| ||||    
T  5616797 acaaagcctattaagggaataat 5616819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13077397 - 13077619
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||      
T  13077397 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcatttaa 13077496  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||| ||| |||| ||||||||||||| |||||||||||||||    
T  13077497 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctattttactacaagtaattttcaactagattaaagcctacataaaagcctataaca 13077596  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| || |||||||    
T  13077597 acaaagcctattaagagactaat 13077619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 22 - 223
Target Start/End: Complemental strand, 27090821 - 27090619
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    |||||||||||| ||||||  ||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||| | |||||||    
T  27090821 cctatttaaaagcctggactagcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgacctactaaataggttaaacat 27090722  T
Q  122 gccttaaagcctactt-aaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggact 220  Q
    | |||||| ||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27090721 gtcttaaaacctacttaaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctatttagggact 27090622  T
Q  221 aat 223  Q
    |||    
T  27090621 aat 27090619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42384303 - 42384485
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  42384303 gtttttctaggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 42384402  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||    
T  42384403 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagccta 42384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 42650057 - 42649847
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||||||| |||||||||||| |||||| |||||||||||||| |||||  ||||||| | ||||||| |||||||||||||||||||    
T  42650057 gtttttctaggcctgacctggcctatttaaaagcctggactggcctgaaagcctaattacaagcctacttgacattaaggccatcaaatagttcatttgg 42649958  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| | |||||| |||||||||||| |||||| |||| ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  42649957 cctactaaataggctaaacaag-cttaaaacctacttaaaagcctatttcactataagtaaattttaactagattaaagcctaattagaagcctataaca 42649859  T
Q  201 acaaagcctatt 212  Q
    |||||| |||||    
T  42649858 acaaagtctatt 42649847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26257493 - 26257714
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||  |||||||||||||||| |||||| || ||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  26257493 gtttttctaggtctggtctgacctatttaaaagcctggactggtctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 26257592  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| | ||||||||||||||||| |||||| ||||||||||||||| |||| ||||| || |||| |||||||||||||||    
T  26257593 cctactaaataggttaaacatgtcataaagcctacttaaaagcctatttcactacaagtaaatttcaactagattacagtctacataaaagcctataaca 26257692  T
Q  201 acaaagcctatttagggactaat 223  Q
    ||||| |||||| ||||||||||    
T  26257693 acaaa-cctattaagggactaat 26257714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44779498 - 44779277
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||  |||||||||||||||| |||||| || ||||||||||| ||| || ||||||||| ||||||| ||||||||||||||||||     
T  44779498 gtttttctaggtctggtctgacctatttaaaagcctggactggtctgaaagcctacttataggcctacttcacattaaggccatcaaatagttcatttga 44779399  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||   |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||| |||| |||||||||||||||    
T  44779398 cctactaaatagattaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaag-ctacataaaagcctataaca 44779300  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  44779299 acaaagtctattaagggactaat 44779277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 5506922 - 5506739
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  5506922 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcatttgg 5506823  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctac 184  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||    
T  5506822 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctac 5506739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 37536215 - 37536106
Alignment:
Q  114 ctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctattt 213  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37536215 ctaaacatgccttaaagcctacttaaaagcctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctattt 37536116  T
Q  214 agggactaat 223  Q
    ||||||||||    
T  37536115 agggactaat 37536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6305127 - 6305337
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || |||||||| |||||||||||| |||||| | |||||||||||| |||||| ||||||| | ||||||| |||||||||||||||||||    
T  6305127 gtttttctaggtctgacctggcctatttaaaagcctggactgccctgaaagcctaattacaggcctacttaacattaaggccatcaaatagttcatttgg 6305226  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| |||||||| || |||||||            |||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  6305227 cctactaaataggctaaacaggctttaaagc------------ctatttcactataagtaaattttaactagattaaagcctaattaaaagcctataaca 6305314  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||| ||||| ||||||||||    
T  6305315 acaaagtctattaagggactaat 6305337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 7329715 - 7329900
Alignment:
Q  26 tttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgcct 125  Q
    ||||||||||||||| |||||||||||||| ||  |  || |||| | ||| ||| |||||| ||||||||||| ||| ||||||| |||||||| || |    
T  7329715 tttaaaagtctggactggcctgaaagcctacttcaaagcccactttacatttaggccatcaagtagttcatttgacctgctaaataggctaaacaagctt 7329814  T
Q  126 taaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctat 211  Q
    ||||||||||||||||| ||||||  || |||| |||||||||| | |||||||||||| ||||||||| ||||||||||||||||    
T  7329815 taaagcctacttaaaagcctattttgctccaagcaaattttaacagcattaaagcctacctaaaagcctgtaacaacaaagcctat 7329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 46313728 - 46313932
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||||||||  ||| |||||| |||||  ||| | | ||||| |||||| ||  |  |||| || | |||| ||||||||||||||||||||      
T  46313728 gtttttcttggcctggtctggcctattaaaaagcatggtctgacctgatagcctaatttgaagcctatttaacattatggtcatcaaatagttcatttta 46313827  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||| ||||||||||||||||||||| |||||| |||| ||  ||||||||||   || |||| ||  ||||||||||||||||    
T  46313828 catactaaataggttaaacaggccttaaagcctacttaaaagcctattttactaaaaacaaattttaacaacataaaaggctgtttaaaagcctataaca 46313927  T
Q  201 acaaa 205  Q
    |||||    
T  46313928 acaaa 46313932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 18701051 - 18700928
Alignment:
Q  82 catcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcc 181  Q
    ||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||||            |||||||||||||| ||||  |||||||||    
T  18701051 catcaaatagttcatttggactactaaataggttaaacatgtcttaaagcctacttaa------------ctacaagtaaatttcaactaaattaaagcc 18700964  T
Q  182 tacttaaaagcctataacaacaaagcctatttaggg 217  Q
    ||| ||||||| ||||||||||||||||||| ||||    
T  18700963 tacataaaagcatataacaacaaagcctattaaggg 18700928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 31502379 - 31502297
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaata 90  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||| |||| || |||||||||| ||||| |||||    
T  31502379 ttggtctgacctgacctatttaaaagtctagaccgacctgaaagcctatttatagacatatttcatattaaagtcattaaata 31502297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 44969132 - 44969217
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaa 88  Q
    |||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| |||| ||||    
T  44969132 tttttttggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcaccaaa 44969217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 8417332 - 8417412
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  8417332 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 8417412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 52222830 - 52222910
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  52222830 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 52222910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 19708992 - 19708925
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  19708992 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 19708925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 33785299 - 33785366
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  33785299 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 33785366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 39860476 - 39860401
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  39860476 ttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 39860401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31225603 - 31225545
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttaca 61  Q
    |||| ||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||    
T  31225603 tttttttggcctgatctgacctatttaaaagtttggcctggcctgaaagcctatttaca 31225545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 6889528 - 6889448
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| || | ||||||||||||||||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  6889528 tttttttggcctggccaggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtca 6889448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 6891374 - 6891294
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||  ||| ||||||||||||||||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  6891374 tttttttggcctggtctggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtca 6891294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 46846863 - 46846943
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| || | | ||||||||||||||||||||| |||||||  |||||| ||||    
T  46846863 tttttttggcctggcctggcctatttaaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagtca 46846943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 31316145 - 31316208
Alignment:
Q  35 ctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcattt 98  Q
    |||||| ||| |||||||||| || |||||||| || | |||||||||||||||||||||||||    
T  31316145 ctggactggcttgaaagcctactttcagacctattttacattaaggtcatcaaatagttcattt 31316208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3831589 - 3831655
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||||||||||  | ||||||||||||||||||||| |||||||  |||||| ||||    
T  3831589 cctggcctatttaaaagtctgacctggcctgaaagcctatttacaggcctacttactattaaagtca 3831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 13253347 - 13253428
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||| |||||||| |||| ||||||||||||||||    | ||||||||||||||||||| |||||||  |||||| ||||    
T  13253347 ttttttttggcctggcctggcctatttaaaagtctgacatgacctgaaagcctatttacaggcctacttactattaaagtca 13253428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 45372784 - 45372723
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||| ||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  45372784 cctatttaaaagtttggcctggcctgaaagcctatttacaggcctacttactattaaagtca 45372723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 31493461 - 31493397
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagaccta 67  Q
    |||| |||||||  |||||||||||||||||||||| | |||| |||||| ||||||||| ||||    
T  31493461 tttttttggcctagcctgacctatttaaaagtctggtctggcccgaaagcttatttacaggccta 31493397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 5506721 - 5506670
Alignment:
Q  172 gattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||| | ||| ||||| ||||||||||||||||||||| ||||||||||    
T  5506721 gattaaatcatacataaaaccctataacaacaaagcctattaagggactaat 5506670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 42384478 - 42384513
Alignment:
Q  188 aaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42384478 aaagcctataacaacaaagcctattaagggactaat 42384513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 50097061 - 50097003
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttaca 61  Q
    |||| |||||||| |||| ||||||||||||| |||   ||||||||||||||||||||    
T  50097061 tttttttggcctggcctggcctatttaaaagtatggcttggcctgaaagcctatttaca 50097003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 24434480 - 24434558
Alignment:
Q  82 catcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaatt 164  Q
    |||||||||||||| ||| ||||||||||||| |||| | ||||    |||||| ||||||| |||||  |||||||||||||    
T  24434480 catcaaatagttcacttgacctactaaataagttaaataggcct----gcctacataaaagtatatttctctacaagtaaatt 24434558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 32239311 - 32239250
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||||||||||||   |||||||||| |||||||||| |||||||  |||||| ||||    
T  32239311 cctatttaaaagtctggcttggcctgaaagactatttacaggcctacttactattaaagtca 32239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 17805918 - 17805993
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| ||     ||||||||||||||||||||| |||||||  |||||| ||||    
T  17805918 tttttttggcctggcctggcctatttaaaagcct-----ggcctgaaagcctatttacaggcctacttactattaaagtca 17805993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6283466 - 6283688
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||| |||||| ||||||| ||||||||  ||||||||||||||||||     
T  6283466 gtttttcttggcctggcctgacctatttaaaagtctggactgacctgaaagcctacttacaggcctactttatattaagaccatcaaatagttcatttga 6283565  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  6283566 cctactaaataagctaaacatgccttaaagcctacttaaatgtctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctgtaaca 6283665  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||  ||||||||||||||||    
T  6283666 acaaaatctatttagggactaat 6283688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7298929 - 7299149
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| ||| | ||||| |||||||||||||||| |||||||||||||| |||||  ||||||| ||||||||| |||||||||||||||||||    
T  7298929 gtttttcttggtctggcttgaccgatttaaaagtctggactggcctgaaagcctacttacaagcctactttatattaaggccatcaaatagttcatttgg 7299028  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7299029 cctactaaataagctaaacatgccttaaagcctactt--aagcctatttaactacaagtaaattttaactagattaaagcctacttaaaagcctataaca 7299126  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  7299127 acaaagcctatttagggactaat 7299149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35959432 - 35959654
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| ||| ||||||||||||||||| |||||| | |||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||    
T  35959432 gtttttcttggtctggcctgacctatttaaaagcctggactgacctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcatttgg 35959531  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  35959532 cctactaaataagttaaacatacctcaaagcctacttaaaagcctatttaactacaagtaaattttaactagattaaagcatacttaaaagcctataaca 35959631  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||||||||||||||    
T  35959632 acaaagcctatttagggactaat 35959654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 29044202 - 29044423
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||    
T  29044202 tttttctaggcctgacctggcctatttaaaagcctggactggcctgaaagcctacttacaggactacttcaaattaaggtcatcaaatagttcatttggc 29044301  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  29044302 ctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaa 29044401  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  29044402 caaagcctattaagggactaat 29044423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2182740 - 2182518
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||||| || ||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  2182740 gtttttctaggcctgacttggcctatttaaaagcatggaccggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcatttgg 2182641  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  2182640 cctactaaataggttaaacatgtcttaaagtctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 2182541  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  2182540 acaaagcctattaagggactaat 2182518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25879767 - 25879545
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| ||||||||||||||||||  |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  25879767 gtttttctaggcctggcctggcctatttaaaagtctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 25879668  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  25879667 cctactaaataggttaaacatgtcttaaagcctacttaaaagtctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 25879568  T
Q  201 acaaagcctatttagggactaat 223  Q
     ||||||||||| ||||||||||    
T  25879567 gcaaagcctattaagggactaat 25879545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2995064 - 2994842
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||    
T  2995064 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggtcatcaaatagttcatttgg 2994965  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    | ||||||||| | |||||||  ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  2994964 catactaaataggttaaacatatcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 2994865  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  2994864 acaaagcctattaagggactaat 2994842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29768392 - 29768614
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| |||||| |||| |||||||||||| |||||| |||||||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||    
T  29768392 gtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcctacttcacattaaggccatcaaatagttcatttgg 29768491  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  29768492 cctactaaataggttaaacatgtcttaaagactacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataaca 29768591  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  29768592 acaaagcctattaagggactaat 29768614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 22439933 - 22439713
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||||||||||||||||||||||||||||  ||||| | ||||||| | ||||  ||| ||||||| |  ||||||||||||||||||||||||| |    
T  22439933 tttttcttggcctgacctgacctatttaaaagcatggactgacctgaaaacatattatcag-cctactttacgttaaggtcatcaaatagttcatttgac 22439835  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    ||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22439834 ctattaaataggctaaacatgccttaaagcctacttaaaagcctatttcactacaagtaaattttaactagattaaagcctacttaaaagcctataacaa 22439735  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  22439734 caaagcctattaagggactaat 22439713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6431619 - 6431839
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| || ||| |||| |||||||||||| |||||| |||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||    
T  6431619 gtttttctaggtctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggtctacttcacattaaggtcatcaaatagttcatttgg 6431718  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    ||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||| ||| |||||||||||||||    
T  6431719 cctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcttacataaaagcctataaca 6431818  T
Q  201 acaaagcctatttagggacta 221  Q
    |||||||||||| ||||||||    
T  6431819 acaaagcctattaagggacta 6431839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 1834357 - 1834145
Alignment:
Q  11 gcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaat 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||||| | | ||||| ||||||||||||||||||||||||| |||    
T  1834357 gcctgacctgacctatttaaaagcctggactggcctgaaagcctaattacaggcctacttaacaataaggccatcaaatagttcatttggcctactgaat 1834258  T
Q  111 aagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagccta 210  Q
    | |||||||| ||||||||| |||| |||||| |||||| |||| ||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||    
T  1834257 aggctaaacaggccttaaagtctacctaaaagcctatttgactataagtaaattttaactagattaaagcctaattaaaagcctatagcaacaaagtcta 1834158  T
Q  211 tttagggactaat 223  Q
    || ||||||||||    
T  1834157 ttaagggactaat 1834145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 2611401 - 2611602
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacat 121  Q
    |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||| |||||||||| | |||||||    
T  2611401 cctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttggtctactaaataggttaaacat 2611500  T
Q  122 gccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggacta 221  Q
    | ||| |||||||||||||||  ||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  2611501 gtcttcaagcctacttaaaagcttatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcatattaagggacta 2611600  T
Q  222 at 223  Q
    ||    
T  2611601 at 2611602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 44092828 - 44092607
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggc 101  Q
    ||||||| | |||| |||| |||||||||||| ||||||  ||||||||||||| ||| || || |||||| ||||||| ||||||||| ||||||||||    
T  44092828 tttttctagacctggcctggcctatttaaaagcctggacttgcctgaaagcctacttataggcccacttcacattaaggccatcaaataattcatttggc 44092729  T
Q  102 ctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaa 201  Q
    |||||||||| | |||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| |||| |||||||| ||||||||||||||||    
T  44092728 ctactaaataggttaaacatgtcttaaagcctacttaaaagtttatttcactacaagtaaatttcaactagattcaagcctacataaaagcctataacaa 44092629  T
Q  202 caaagcctatttagggactaat 223  Q
    ||||||||||| ||||||||||    
T  44092628 caaagcctattaagggactaat 44092607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 6419975 - 6419752
Alignment:
Q  4 tttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagtt----catttg 99  Q
    ||||| ||||||||||  |||||||||||| |||||| | | |||||| ||| |||||| |||| |||| ||||||| ||||||||||||    ||||||    
T  6419975 tttctaggcctgacctagcctatttaaaagcctggactgacatgaaagtctacttacaggcctaattcacattaaggccatcaaatagttagttcatttg 6419876  T
Q  100 gcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataac 199  Q
    |||||||||||| | |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  6419875 gcctactaaataggttaaacatgtcttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataac 6419776  T
Q  200 aacaaagcctatttagggactaat 223  Q
    ||||||||||||| ||||||||||    
T  6419775 aacaaagcctattaagggactaat 6419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31452903 - 31452683
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||| | ||||| | ||||||| ||||||||||| |||||||    
T  31452903 gtttttcttggcctgacctgacctatttaaaagtctg-actggcctgaaagcctactttcaggcttactttacattaaggccatcaaatagt-catttgg 31452806  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||| |||||  |||||||   | ||| | |||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  31452805 cctattaaattggctaaacggacattacatcctacttaaaagcctatttcactacaagtaaattttaactagattaaagtctacttaaaagcctataaca 31452706  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||  ||||||||||    
T  31452705 acaaagcctatcaagggactaat 31452683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 38446297 - 38446138
Alignment:
Q  64 cctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaat 163  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||| |||||| |||||||||||||    
T  38446297 cctacttcacattaaggccatcaaatagttcatttgacctactaaataggttaaacatgtcttaaagactacttaaaagcctatttcactacaagtaaat 38446198  T
Q  164 tttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    || |||| ||||| ||||||| |||||| |||||||||||||||||||| ||||||||||    
T  38446197 ttcaactagattatagcctacataaaagtctataacaacaaagcctattaagggactaat 38446138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 26260258 - 26260082
Alignment:
Q  48 aaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaa-gtcta 146  Q
    |||||||  |||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||| | ||||| |  ||||||| |||||||||| | |||    
T  26260258 aaagcctgcttacaggcctacttcacattaaggccatcaaatagttcatttagcctactaaataggttaaacttatcttaaaggctacttaaaaagccta 26260159  T
Q  147 tttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||| ||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  26260158 tttcactacaagtaaatttcaactagattaaagcatacataaaagcctataacaacaaagcctattaagggactaat 26260082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 42077052 - 42077198
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||| ||||||  ||| ||||||||||||||||||| || ||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||    
T  42077052 gtttttctaggcctggtctggcctatttaaaagtctggactggtctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatttgg 42077151  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctat 147  Q
    | ||||||||| | |||||||| ||||||||||||||||||| ||||    
T  42077152 cttactaaataggttaaacatgtcttaaagcctacttaaaagcctat 42077198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 12465766 - 12465957
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||| || |||  |||| ||||||||| ||||||| ||||| |||||||| ||||||  |||||| | |||||||||||||||||||| |||||     
T  12465766 gtttttctttgcatgatttgacgtatttaaaaatctggactggcctaaaagcctacttacaggtctactttacattaaggtcatcaaatagtttatttga 12465865  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagc 192  Q
    ||||||||||| | |||| |  | ||||| ||||||||||||||||||| |||| |||||||| |||||| |||||||| | ||||||||||    
T  12465866 cctactaaataggataaatagactttaaaacctacttaaaagtctatttcactataagtaaatgttaactagattaaagtcaacttaaaagc 12465957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 38086730 - 38086917
Alignment:
Q  23 ctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatg 122  Q
    ||||||||||||||| || | ||||||||||| ||| ||| | || || | ||||||| | ||||||||| ||||| ||||  |||||  |||||||| |    
T  38086730 ctatttaaaagtctgaactgacctgaaagccttttttcaggcttattttacattaaggccgtcaaatagt-cattttgcctgttaaattggctaaacaag 38086828  T
Q  123 ccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||  |||||||||||| |||||    
T  38086829 ccttaaagcctacttaaaag-ctatttcactacaagtaaattttaactagattaaaacctacttaaaagctgataacaacaaagtctatt 38086917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 45434762 - 45434861
Alignment:
Q  124 cttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  45434762 cttaaagcctacttaaaagcctatttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctattaagggactaat 45434861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 17740533 - 17740392
Alignment:
Q  42 ggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaa 141  Q
    ||||||||| ||||  ||||  ||||||| | ||||||| |||||||||||| ||||||||||||||||| |||| ||| |||||||| |||||||||||    
T  17740533 ggcctgaaaacctacatacatgcctactttacattaaggccatcaaatagtttatttggcctactaaataggctatacaagccttaaaacctacttaaaa 17740434  T
Q  142 gtctatttaactacaagtaaattttaactggattaaagccta 183  Q
    | |||| | |||||||||||||||||||| ||||||||||||    
T  17740433 gcctatatcactacaagtaaattttaactagattaaagccta 17740392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 42516986 - 42517197
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||| |||  |||| |||||||||||  || || | |||||||||||| || ||||||||||| | ||||||| || |||||| | |||||||    
T  42516986 gtttttcttggtctggtctgaactatttaaaagcatgaactgccctgaaagcctacttccagacctactttacattaaggccaacaaataat-catttgg 42517084  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataaca 200  Q
    |||||| || ||          ||||||||||| ||||||||  ||||| | |||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  42517085 cctacttaaaaa----------ccttaaagcctgcttaaaagcttatttcagtacaagtaaattttaactagattaaagcctacttaaaaacctaaaaca 42517174  T
Q  201 acaaagcctatttagggactaat 223  Q
    |||||||||||| ||||||||||    
T  42517175 acaaagcctattaagggactaat 42517197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 18075800 - 18075720
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  18075800 tttttttggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 18075720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 42077176 - 42077225
Alignment:
Q  174 ttaaagcctacttaaaagcctataacaacaaagcctatttagggactaat 223  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42077176 ttaaagcctacttaaaagcctataacaacaaagcctattaagggactaat 42077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43639076 - 43639192
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||||||| | || |||||| ||||||| ||||||| | |  ||||||||||| || || ||||| || | ||||||||||||||||||||||||||     
T  43639076 gtttttcttgacatggcctgacgtatttaacagtctggcctgatctgaaagcctacttccaaacctagtttaaattaaggtcatcaaatagttcatttga 43639175  T
Q  101 cctactaaataagctaa 117  Q
    |||| ||||||| ||||    
T  43639176 cctaataaataatctaa 43639192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 15899711 - 15899610
Alignment:
Q  17 cctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagcta 116  Q
    |||||| ||||||||||||||| | | ||||||||||||  | |||||||| || | ||||| ||||| |||||||||||||  ||||||||||| ||||    
T  15899711 cctgacttatttaaaagtctggtctgacctgaaagcctacatccagacctattttacattaaagtcattaaatagttcattttacctactaaataggcta 15899612  T
Q  117 aa 118  Q
    ||    
T  15899611 aa 15899610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12033844 - 12033764
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  12033844 tttttttggcctggtctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagtca 12033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 29557520 - 29557600
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||| || |||| ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  29557520 tttttttggcatggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 29557600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 38213501 - 38213581
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||||||||||||||||||||| | | |||||||||||||||||||  ||||||  |||||| ||||    
T  38213501 tttttttggcctggcctgacctatttaaaagtctggcctgacctgaaagcctatttacaggtctacttactattaaagtca 38213581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 34726339 - 34726264
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| ||||||||||||||||| |||| | | ||||||||||||||||||| |||||||  |||||| ||||    
T  34726339 ttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctatttacaggcctacttactattaaagtca 34726264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 40737905 - 40737972
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  40737905 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 40737972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 43616406 - 43616467
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  43616406 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 43616467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 18681596 - 18681673
Alignment:
Q  125 ttaaagcctacttaaaagtctatttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaa 205  Q
    ||||||||| ||||||| ||||||| ||| |||| ||||||||||   ||  |||||||||||||||||||||||||||||    
T  18681596 ttaaagcct-cttaaaattctatttcactgcaagcaaattttaacaacat--aagcctacttaaaagcctataacaacaaa 18681673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38446348 - 38446294
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagccta 55  Q
    |||||||| ||||||  ||||||||||||||||  ||||| ||||||||||||||    
T  38446348 gtttttctaggcctggtctgacctatttaaaagcttggactggcctgaaagccta 38446294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 21198147 - 21198075
Alignment:
Q  11 gcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||| |||| |||||||||||| |||  | ||||| ||||||||||||||| |||||||  |||||| ||||    
T  21198147 gcctggcctggcctatttaaaagcctgacctggcctaaaagcctatttacaggcctacttactattaaagtca 21198075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10710 - 10885
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  10710 gtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctactttatattaaggtcatcaaaaagttcatttgg 10809  T
Q  101 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactggatta 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10810 cctactaaataagctaaacatgccttaaagcctacttaaaagtctatttaactacaagtaaattttaactagatta 10885  T

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Target: scaffold0275 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 9274 - 9438
Alignment:
Q  48 aaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttggcctactaaataagctaaacatgccttaaagcctacttaaaagtctat 147  Q
    |||||||| |||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||| | ||||||||  |||||||||||||||||| ||||    
T  9274 aaagcctacttacaggcctacttcacattaaggccatcaaatagttcattcggcctactaaataggttaaacatgttttaaagcctacttaaaagcctat 9373  T
Q  148 ttaactacaagtaaattttaactggattaaagcctacttaaaagcctataacaacaaagcctatt 212  Q
    || ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  9374 ttcactacaagtaaatttcaactagattaaagcctacataaaagcctataacaacaaagcctatt 9438  T

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Target: scaffold0886 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1808 - 1672
Alignment:
Q  1 gtttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtcatcaaatagttcatttgg 100  Q
    |||||| | ||||||||||| |||||||||||| |||||| |||||||||||||| ||| |   |||||| | |||||||||||||||||||||||||||    
T  1808 gtttttttaggcctgacctggcctatttaaaagcctggactggcctgaaagcctaattataagtctacttaacattaaggtcatcaaatagttcatttgg 1709  T
Q  101 cctactaaataagctaaacatgccttaaagcctactt 137  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  1708 cctactaaataggctaaacaggccttaaagcctactt 1672  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 41005 - 41085
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  41005 tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 41085  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 81354 - 81279
Alignment:
Q  8 ttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    |||||||| |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  81354 ttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 81279  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 15671 - 15752
Alignment:
Q  2 tttttcttggcctgacctgacctatttaaaagtctggaccggcctgaaagcctatttacagacctacttcatattaaggtca 83  Q
    ||||| ||||| || |||| |||||||||||| |||| | ||||||||||||||||||||| |||||||  |||||| ||||    
T  15671 ttttttttggcttggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtca 15752  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 40079 - 40160
Alignment:
Q  3 ttttcttggcctgacctgacctatttaaaagtctggaccggcctg-aaagcctatttacagacctacttcatattaaggtca 83  Q
    |||| ||||| || ||||||||||||||||| |||| | |||||| ||||||||||||||| |||||||  |||||| ||||    
T  40079 tttttttggcatggcctgacctatttaaaagcctggcctggcctgaaaagcctatttacaggcctacttactattaaagtca 40160  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 218272 - 218232
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacag 62  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  218272 cctatttaaaagtctggcctggcctgaaagcctatttacag 218232  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 24901 - 24949
Alignment:
Q  22 cctatttaaaagtctggaccggcctgaaagcctatttacagacctactt 70  Q
    |||||||||||| |||| | | ||||||||||||||||||| |||||||    
T  24901 cctatttaaaagcctggtctgacctgaaagcctatttacaggcctactt 24949  T

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