View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10167_low_58 (Length: 238)
Name: NF10167_low_58
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10167_low_58 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 3576045 - 3575841
Alignment:
| Q |
14 |
gcataggagaattgaggttttctagttgtggaagttgtaggaaattattagcatcattattattaatgtgtatattgtattgcaattgatccaactcttg |
113 |
Q |
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| T |
3576045 |
gcataggagaattgaggttttctagttgtggaagttgtaggaaattattagcatcattattattaatgtgtatattgtattgcaattgatccaactcttg |
3575946 |
T |
|
| Q |
114 |
tttgcaagggtaatgctgttgttgatgttggtatgatgcattataagggtgatgagaagaaattctgcttggggattcaagctctgattgcatgaatgat |
213 |
Q |
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| T |
3575945 |
tttgcaaggataatgctgttgttgatgttggtatgatgcattataagggtgatgagaagaaattctgcttggggattcaagctctgattgcatgaatgat |
3575846 |
T |
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| Q |
214 |
acttg |
218 |
Q |
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| T |
3575845 |
acttg |
3575841 |
T |
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