View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10167_low_63 (Length: 221)

Name: NF10167_low_63
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10167_low_63
NF10167_low_63
[»] chr7 (41 HSPs)
chr7 (1-171)||(22795068-22795239)
chr7 (167-221)||(42508117-42508171)
chr7 (172-221)||(15074318-15074367)
chr7 (171-221)||(20566449-20566499)
chr7 (172-221)||(10098267-10098316)
chr7 (172-221)||(41880448-41880497)
chr7 (171-221)||(18105306-18105356)
chr7 (172-221)||(10168348-10168397)
chr7 (172-221)||(10175873-10175922)
chr7 (172-221)||(17465803-17465852)
chr7 (172-221)||(17587362-17587411)
chr7 (172-221)||(35610505-35610554)
chr7 (171-221)||(10097849-10097899)
chr7 (176-218)||(40141319-40141361)
chr7 (171-221)||(48403305-48403355)
chr7 (172-217)||(618819-618864)
chr7 (172-217)||(10098211-10098256)
chr7 (172-221)||(20564007-20564056)
chr7 (171-218)||(16636335-16636382)
chr7 (171-218)||(17459256-17459303)
chr7 (171-218)||(17593911-17593958)
chr7 (171-221)||(603712-603762)
chr7 (172-221)||(9371477-9371527)
chr7 (176-221)||(9365584-9365629)
chr7 (169-218)||(13921356-13921405)
chr7 (172-221)||(35606723-35606772)
chr7 (172-217)||(45763313-45763358)
chr7 (181-217)||(30786489-30786525)
chr7 (169-221)||(41884216-41884268)
chr7 (177-217)||(43624240-43624280)
chr7 (171-218)||(10524449-10524496)
chr7 (171-218)||(49141710-49141757)
chr7 (172-218)||(7004-7050)
chr7 (170-216)||(7975704-7975750)
chr7 (172-218)||(18109867-18109913)
chr7 (172-218)||(42795172-42795218)
chr7 (181-211)||(43032916-43032946)
chr7 (176-221)||(30791098-30791143)
chr7 (176-221)||(43619643-43619688)
chr7 (170-218)||(42582048-42582096)
chr7 (170-218)||(46907472-46907520)
[»] chr8 (36 HSPs)
chr8 (170-221)||(25624-25675)
chr8 (171-221)||(2416136-2416186)
chr8 (172-221)||(489716-489765)
chr8 (172-221)||(42485628-42485677)
chr8 (167-221)||(23022377-23022431)
chr8 (169-221)||(1052489-1052541)
chr8 (175-221)||(26659391-26659437)
chr8 (172-221)||(21720-21769)
chr8 (172-221)||(184309-184358)
chr8 (172-217)||(184646-184691)
chr8 (176-221)||(483721-483766)
chr8 (173-218)||(15036795-15036840)
chr8 (176-221)||(22510486-22510531)
chr8 (172-221)||(36677646-36677695)
chr8 (172-217)||(36678023-36678068)
chr8 (170-218)||(15030816-15030864)
chr8 (171-218)||(45066454-45066501)
chr8 (172-218)||(2335240-2335286)
chr8 (171-221)||(17924373-17924423)
chr8 (172-221)||(22014180-22014229)
chr8 (172-221)||(22519685-22519734)
chr8 (181-217)||(30305638-30305674)
chr8 (181-217)||(32379016-32379052)
chr8 (181-217)||(32432971-32433007)
chr8 (172-218)||(915727-915773)
chr8 (171-221)||(1114676-1114726)
chr8 (181-211)||(8423890-8423920)
chr8 (171-221)||(26663123-26663173)
chr8 (172-218)||(31185537-31185583)
chr8 (171-221)||(32375584-32375634)
chr8 (172-221)||(1056291-1056340)
chr8 (168-217)||(7339996-7340045)
chr8 (176-221)||(7344647-7344692)
chr8 (172-221)||(23018619-23018668)
chr8 (181-221)||(17924044-17924084)
chr8 (170-218)||(44841966-44842014)
[»] chr5 (19 HSPs)
chr5 (170-221)||(11027027-11027078)
chr5 (172-221)||(28241889-28241938)
chr5 (172-221)||(38860258-38860307)
chr5 (172-221)||(19041207-19041256)
chr5 (169-221)||(11033552-11033604)
chr5 (172-218)||(37820940-37820986)
chr5 (172-221)||(38853413-38853462)
chr5 (167-221)||(19035134-19035188)
chr5 (181-218)||(28886486-28886523)
chr5 (175-221)||(28876580-28876626)
chr5 (169-218)||(8580572-8580621)
chr5 (172-221)||(37814516-37814565)
chr5 (181-217)||(14279792-14279828)
chr5 (172-218)||(27659874-27659920)
chr5 (171-221)||(28238072-28238122)
chr5 (171-221)||(39743238-39743288)
chr5 (161-218)||(5700-5757)
chr5 (172-221)||(27867910-27867959)
chr5 (173-221)||(34124025-34124073)
[»] chr4 (43 HSPs)
chr4 (171-221)||(13182188-13182238)
chr4 (172-221)||(1089674-1089723)
chr4 (172-221)||(6181881-6181930)
chr4 (172-221)||(13173168-13173217)
chr4 (172-221)||(40352300-40352349)
chr4 (172-221)||(49090381-49090430)
chr4 (171-221)||(6175780-6175830)
chr4 (171-221)||(30726831-30726881)
chr4 (171-221)||(41801027-41801077)
chr4 (168-221)||(41793261-41793314)
chr4 (171-221)||(1305341-1305390)
chr4 (172-218)||(51037560-51037606)
chr4 (172-221)||(1087794-1087843)
chr4 (176-221)||(9893354-9893399)
chr4 (169-218)||(26932515-26932564)
chr4 (172-221)||(31421640-31421689)
chr4 (172-221)||(31425408-31425457)
chr4 (172-221)||(49096441-49096490)
chr4 (172-217)||(52529147-52529192)
chr4 (172-217)||(54634109-54634154)
chr4 (172-221)||(55799650-55799699)
chr4 (173-221)||(1309204-1309252)
chr4 (170-221)||(30723053-30723104)
chr4 (170-217)||(37563374-37563421)
chr4 (172-218)||(26792337-26792383)
chr4 (171-221)||(39773631-39773681)
chr4 (172-217)||(38368166-38368211)
chr4 (172-221)||(49169187-49169236)
chr4 (171-218)||(40833702-40833749)
chr4 (171-217)||(7485754-7485800)
chr4 (172-218)||(21022980-21023026)
chr4 (172-218)||(23220613-23220659)
chr4 (172-218)||(46253421-46253467)
chr4 (172-218)||(46254540-46254586)
chr4 (172-221)||(49164997-49165044)
chr4 (171-221)||(54633745-54633795)
chr4 (171-217)||(55587292-55587338)
chr4 (172-221)||(9889928-9889977)
chr4 (172-217)||(23221760-23221805)
chr4 (169-218)||(29307554-29307603)
chr4 (172-221)||(37562999-37563048)
chr4 (181-217)||(49566544-49566580)
chr4 (169-217)||(55588377-55588425)
[»] chr2 (48 HSPs)
chr2 (171-221)||(30497039-30497089)
chr2 (172-221)||(15831061-15831110)
chr2 (171-221)||(17426488-17426538)
chr2 (171-221)||(39800742-39800792)
chr2 (171-221)||(42505852-42505902)
chr2 (176-221)||(3940819-3940864)
chr2 (172-221)||(17420502-17420551)
chr2 (172-221)||(39793897-39793946)
chr2 (172-221)||(5351897-5351947)
chr2 (167-221)||(15835301-15835355)
chr2 (172-221)||(28468575-28468624)
chr2 (172-217)||(38945696-38945741)
chr2 (172-221)||(42499687-42499736)
chr2 (176-221)||(43978474-43978519)
chr2 (172-221)||(45428550-45428599)
chr2 (176-221)||(3935768-3935813)
chr2 (175-220)||(43539828-43539873)
chr2 (172-221)||(44100888-44100937)
chr2 (171-218)||(3085970-3086017)
chr2 (171-221)||(5355621-5355671)
chr2 (172-218)||(20937832-20937878)
chr2 (172-218)||(21998148-21998194)
chr2 (172-214)||(28477163-28477205)
chr2 (171-221)||(30493292-30493342)
chr2 (171-221)||(43536035-43536085)
chr2 (169-218)||(29074095-29074144)
chr2 (176-221)||(41564582-41564627)
chr2 (176-221)||(43984424-43984469)
chr2 (181-217)||(213547-213583)
chr2 (181-217)||(10624560-10624596)
chr2 (172-216)||(26543238-26543282)
chr2 (177-217)||(41559980-41560020)
chr2 (175-218)||(30803110-30803153)
chr2 (171-221)||(5351822-5351872)
chr2 (171-221)||(7267534-7267584)
chr2 (172-218)||(10424774-10424820)
chr2 (171-221)||(27276464-27276514)
chr2 (172-218)||(39033033-39033079)
chr2 (172-218)||(43619235-43619281)
chr2 (176-221)||(208948-208993)
chr2 (172-221)||(7262970-7263019)
chr2 (169-218)||(39490055-39490104)
chr2 (172-217)||(44100636-44100681)
chr2 (169-221)||(1149403-1149455)
chr2 (181-217)||(5334519-5334555)
chr2 (181-221)||(10619942-10619982)
chr2 (181-217)||(18003367-18003403)
chr2 (172-216)||(39947534-39947578)
[»] chr3 (42 HSPs)
chr3 (172-221)||(29008820-29008869)
chr3 (167-221)||(34045337-34045391)
chr3 (171-221)||(46388891-46388941)
chr3 (172-221)||(2968015-2968064)
chr3 (171-221)||(34051436-34051486)
chr3 (171-221)||(42904272-42904322)
chr3 (172-221)||(16444542-16444591)
chr3 (172-221)||(46702115-46702164)
chr3 (172-221)||(49144546-49144595)
chr3 (168-221)||(54392118-54392171)
chr3 (171-221)||(54386066-54386116)
chr3 (172-217)||(1835084-1835129)
chr3 (172-221)||(2858046-2858095)
chr3 (172-217)||(35743352-35743397)
chr3 (172-217)||(41844458-41844503)
chr3 (172-221)||(46406714-46406763)
chr3 (172-221)||(49138515-49138564)
chr3 (172-221)||(50481473-50481522)
chr3 (172-218)||(3493523-3493569)
chr3 (172-218)||(3497217-3497263)
chr3 (171-221)||(3501985-3502035)
chr3 (168-218)||(4002671-4002721)
chr3 (168-218)||(12897755-12897805)
chr3 (172-221)||(2950267-2950316)
chr3 (172-217)||(16851061-16851106)
chr3 (172-221)||(35743670-35743719)
chr3 (172-221)||(42900111-42900160)
chr3 (172-221)||(46697645-46697694)
chr3 (181-217)||(3948671-3948707)
chr3 (181-217)||(8161064-8161100)
chr3 (170-218)||(34543228-34543276)
chr3 (167-218)||(27739659-27739710)
chr3 (170-221)||(41844081-41844132)
chr3 (171-221)||(6745416-6745466)
chr3 (172-218)||(26245270-26245316)
chr3 (172-218)||(50998772-50998818)
chr3 (176-221)||(3953305-3953350)
chr3 (171-216)||(3975665-3975710)
chr3 (176-221)||(8156446-8156491)
chr3 (176-221)||(30943127-30943172)
chr3 (172-221)||(50477114-50477163)
chr3 (181-217)||(30947748-30947784)
[»] chr1 (31 HSPs)
chr1 (172-221)||(30889995-30890044)
chr1 (172-221)||(3732443-3732492)
chr1 (172-221)||(19924689-19924738)
chr1 (172-221)||(26879385-26879434)
chr1 (172-218)||(38633246-38633292)
chr1 (171-221)||(44621207-44621257)
chr1 (172-221)||(13629338-13629387)
chr1 (172-221)||(22397754-22397803)
chr1 (172-221)||(8473717-8473766)
chr1 (171-221)||(3728668-3728718)
chr1 (172-218)||(19914401-19914447)
chr1 (172-221)||(8548759-8548808)
chr1 (172-221)||(19928935-19928984)
chr1 (172-221)||(26875627-26875676)
chr1 (181-217)||(3983029-3983065)
chr1 (181-217)||(20349400-20349436)
chr1 (181-217)||(31945956-31945992)
chr1 (181-217)||(38776221-38776257)
chr1 (170-218)||(46319682-46319730)
chr1 (171-218)||(4883167-4883214)
chr1 (171-218)||(15047215-15047262)
chr1 (172-218)||(253370-253416)
chr1 (172-218)||(2365169-2365215)
chr1 (172-218)||(30195476-30195522)
chr1 (172-218)||(43011762-43011808)
chr1 (176-221)||(3993933-3993978)
chr1 (172-221)||(5077875-5077924)
chr1 (176-221)||(20354025-20354070)
chr1 (176-221)||(20556836-20556881)
chr1 (176-221)||(38771567-38771612)
chr1 (170-218)||(32161385-32161433)
[»] chr6 (17 HSPs)
chr6 (171-221)||(11688047-11688097)
chr6 (172-221)||(27616649-27616698)
chr6 (172-221)||(11694150-11694199)
chr6 (170-217)||(18346973-18347020)
chr6 (176-221)||(30829741-30829786)
chr6 (170-218)||(13382561-13382609)
chr6 (170-221)||(6207183-6207234)
chr6 (172-218)||(13164349-13164395)
chr6 (172-218)||(14012467-14012513)
chr6 (172-221)||(30825984-30826033)
chr6 (181-217)||(1612842-1612878)
chr6 (172-218)||(2109452-2109498)
chr6 (172-218)||(6760964-6761010)
chr6 (168-218)||(8707912-8707962)
chr6 (172-218)||(25554640-25554686)
chr6 (171-221)||(27641841-27641891)
chr6 (172-221)||(18351733-18351782)
[»] scaffold1606 (1 HSPs)
scaffold1606 (172-221)||(51-100)
[»] scaffold0101 (1 HSPs)
scaffold0101 (172-221)||(41146-41195)
[»] scaffold0293 (1 HSPs)
scaffold0293 (175-221)||(812-858)
[»] scaffold0744 (1 HSPs)
scaffold0744 (172-221)||(512-561)
[»] scaffold0014 (1 HSPs)
scaffold0014 (172-221)||(84481-84530)
[»] scaffold0094 (1 HSPs)
scaffold0094 (167-218)||(250-301)
[»] scaffold0494 (2 HSPs)
scaffold0494 (172-218)||(11546-11592)
scaffold0494 (167-221)||(760-814)
[»] scaffold0260 (1 HSPs)
scaffold0260 (181-217)||(11723-11759)
[»] scaffold0634 (1 HSPs)
scaffold0634 (169-216)||(7349-7396)
[»] scaffold0016 (1 HSPs)
scaffold0016 (167-218)||(69313-69364)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22795239 - 22795068
Alignment:
Q  1 ttaggaatgtgatgcgattgaaatgggtttagagtgagggtttagaagaacacgagtttcttcccctaggtttaggatt-gattcaaatgagtttgttgc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  22795239 ttaggaatgtgatgcgattgaaatgggtttagagtgagggtttagaagaacacgagtttcttcccctaggtttaggatttgattcaaatgagtttgatgc 22795140  T
Q  100 tttgtttaggtgtggcaaattcttaggttgagctagtgttttggtacaatacaacaaagaccaattcattta 171  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22795139 tttgtttaggtgtgacaaattcttaggttgagctagtgttttggtacaatacaacaaagaccaattcattta 22795068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 42508171 - 42508117
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42508171 attttgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 42508117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 15074367 - 15074318
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15074367 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 15074318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 20566499 - 20566449
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20566499 agagaattgttgttcccacatatagtttggctgtgccacacgagtaaaata 20566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 10098267 - 10098316
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10098267 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaata 10098316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 41880448 - 41880497
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41880448 gagaattgttgttcccacatatagtatggttgtgccacacgagtaaaata 41880497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 18105306 - 18105356
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18105306 agagaattgttgttcccacatatagtatggccgtaccacacgagtaaaata 18105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 10168397 - 10168348
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10168397 gagaattgttgttcccacatatagtatggatgtgctacacgagtaaaata 10168348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 10175922 - 10175873
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10175922 gagaattgttgttcccacatatagtatggatgtgctacacgagtaaaata 10175873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 17465852 - 17465803
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17465852 gagaattgatgttcccacatatagtatggctgtgccacaccagtaaaata 17465803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 17587362 - 17587411
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17587362 gagaattgatgttcccacatatagtatggctgtgccacaccagtaaaata 17587411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 35610554 - 35610505
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  35610554 gagaattgctgttcccacatatagtatggctgtgccacaccagtaaaata 35610505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 10097849 - 10097899
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  10097849 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 10097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 40141361 - 40141319
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  40141361 attgttgttcccacatatagtttggctgtgccacacgagtaaa 40141319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 48403305 - 48403355
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||    
T  48403305 agagtattgctgttcccacatatagtatggctgtgccacaccagtaaaata 48403355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 618864 - 618819
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| | |||||||||||||||||||||||||||||||||||    
T  618864 gagaattgctcttcccacatatagtatggctgtgccacacgagtaa 618819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 10098256 - 10098211
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  10098256 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 10098211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 20564007 - 20564056
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  20564007 gagaattgctgttcccacatatagtatggttgtgccatacgagtaaaata 20564056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 16636382 - 16636335
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  16636382 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 16636335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 17459256 - 17459303
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  17459256 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 17459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 17593958 - 17593911
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  17593958 agagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 17593911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 603712 - 603762
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  603712 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 603762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 9371527 - 9371477
Alignment:
Q  172 gagaattgttgttcccacatata-gtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  9371527 gagaattgttgttcccacatataggtatggttgtgccacacaagtaaaata 9371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 9365584 - 9365629
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||    
T  9365584 attgctgttcctacatatagtttggctgtgccacacgagtaaaata 9365629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 13921405 - 13921356
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||    
T  13921405 ttagagaattgttgttcccacatttggtttggttgtgccacacgagtaaa 13921356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 35606723 - 35606772
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || || |||||||||||||||||||||    
T  35606723 gagaattgttgttcccacatgttgtttgcctgtgccacacgagtaaaata 35606772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 45763313 - 45763358
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||    
T  45763313 gagatttgctgttcccacatatagtatggctgtgccacaccagtaa 45763358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 30786489 - 30786525
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30786489 tgttcccacatatagtatggctgtgccacaccagtaa 30786525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 41884268 - 41884216
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| | ||||||||| | || ||||||||||||||||||||||||    
T  41884268 ttagagaattgctattcccacatgttgtgtggctgtgccacacgagtaaaata 41884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 43624280 - 43624240
Alignment:
Q  177 ttgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  43624280 ttgttgttcccacatatagtatggttgtgccacaccagtaa 43624240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 10524496 - 10524449
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||||    
T  10524496 agagaattgttgttcccacatttggtttggctgtgtcacacgagtaaa 10524449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 49141757 - 49141710
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || ||||| |||||||||||||||    
T  49141757 agagaattgttgttcccacatttggtttggctatgccacacgagtaaa 49141710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 7004 - 7050
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  7004 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaa 7050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 7975750 - 7975704
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagta 216  Q
    |||||||||||||||||||||| | || ||| |||||||||||||||    
T  7975750 tagagaattgttgttcccacatttggtttggttgtgccacacgagta 7975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 18109913 - 18109867
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || ||||||||| |||||||||||    
T  18109913 gagaattgttgttcccacatttggtttggctgtgctacacgagtaaa 18109867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 42795218 - 42795172
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  42795218 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 42795172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 43032916 - 43032946
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacac 211  Q
    |||||||||||||||||||||||||||||||    
T  43032916 tgttcccacatatagtatggctgtgccacac 43032946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 30791143 - 30791098
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  30791143 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 30791098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 43619643 - 43619688
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  43619643 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 43619688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 42582048 - 42582096
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||    
T  42582048 tagagaattgctgttcccacatttggtttggctatgccacacgagtaaa 42582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 46907472 - 46907520
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||    
T  46907472 tagagaattgctgttcccacatttggtttggctatgccacacgagtaaa 46907520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 25675 - 25624
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25675 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 25624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 2416136 - 2416186
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2416136 agagaattgttgttcccacatatagtatggctgtgccacacaagtaaaata 2416186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 489765 - 489716
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  489765 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 489716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 42485677 - 42485628
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42485677 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 42485628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 23022431 - 23022377
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  23022431 attttgagaattgttgttcccacatatagtatggctgtgccacatcagtaaaata 23022377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 1052489 - 1052541
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  1052489 ttagagaattgctgttcccacatatagtatggatgtgccacaccagtaaaata 1052541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 26659391 - 26659437
Alignment:
Q  175 aattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  26659391 aattgctgttcccacatatagtatggctgtgccacaccagtaaaata 26659437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 21720 - 21769
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  21720 gagaattgttgttcccacatcttgtttggctgtgccacacgagtaaaata 21769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 184309 - 184358
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  184309 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 184358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 184691 - 184646
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  184691 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 483721 - 483766
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  483721 attgttgttcccacatatagtttggttgtgccacacgagtaaaata 483766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 15036840 - 15036795
Alignment:
Q  173 agaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  15036840 agaattgttgttcccacacatagtttggctgtgccacacgagtaaa 15036795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 22510486 - 22510531
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  22510486 attgctgttctcacatatagtatggctgtgccacacgagtaaaata 22510531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 36677646 - 36677695
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  36677646 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 36677695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 36678068 - 36678023
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  36678068 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 36678023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 15030816 - 15030864
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||    
T  15030816 tagagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 15030864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 45066501 - 45066454
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  45066501 agagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 45066454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 2335286 - 2335240
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || |||||||||||||||||||||    
T  2335286 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 2335240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 17924423 - 17924373
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||| | || ||||||||||||||||||||||||    
T  17924423 agagtattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 17924373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 22014180 - 22014229
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  22014180 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 22014229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 22519734 - 22519685
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  22519734 gagaattactgttcccacatatagtttggttgtgccacacgagtaaaata 22519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 30305674 - 30305638
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30305674 tgttcccacatatagtatggctgtgccacaccagtaa 30305638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 32379052 - 32379016
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32379052 tgttcccacatatagtatggctgtgccacaccagtaa 32379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 32433007 - 32432971
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32433007 tgttcccacatatagtatggctgtgccacaccagtaa 32432971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 915773 - 915727
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  915773 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 915727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 1114676 - 1114726
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  1114676 agagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaata 1114726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 8423920 - 8423890
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacac 211  Q
    |||||||||||||||||||||||||||||||    
T  8423920 tgttcccacatatagtatggctgtgccacac 8423890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 26663173 - 26663123
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| | ||||||||| | || ||||||||||||||||||||||||    
T  26663173 agagaattgctattcccacattttgtttggctgtgccacacgagtaaaata 26663123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 31185583 - 31185537
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  31185583 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 31185537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 32375584 - 32375634
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||| ||||||||||| | || ||||||||||||||||||||||||    
T  32375584 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 32375634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 1056340 - 1056291
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || || ||||| |||||||||||||||    
T  1056340 gagaattgttgttcccacatcttgtttgactgtgtcacacgagtaaaata 1056291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 7339996 - 7340045
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||  ||| |||| |||||||||||||||||||||||||| |||||    
T  7339996 tttagagttttgctgtttccacatatagtatggctgtgccacaccagtaa 7340045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 7344692 - 7344647
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  7344692 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 7344647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 23018619 - 23018668
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||| |||||| | || ||||||||||||||||||||||||    
T  23018619 gagaattgctgtttccacatcttgtttggctgtgccacacgagtaaaata 23018668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 17924044 - 17924084
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  17924044 tgttcccacatgttgtttggctgtgccacacgagtaaaata 17924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 44842014 - 44841966
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | | || |||||||||||||| ||||||    
T  44842014 tagagaattgttgttcccacttttggtttggctgtgccacacaagtaaa 44841966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 11027027 - 11027078
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11027027 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 11027078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 28241938 - 28241889
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28241938 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 28241889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 38860307 - 38860258
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38860307 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 38860258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 19041256 - 19041207
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19041256 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 19041207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 11033604 - 11033552
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  11033604 ttagagaattgctgttcccacatatagtatggctgtgccacatgagtaaaata 11033552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 37820986 - 37820940
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  37820986 gagaattgttgttcccacatatagtatggttgtgccacacgagtaaa 37820940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 38853413 - 38853462
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||    
T  38853413 gagaattgttgttctcatatatagtatggctgtgccacacgagtaaaata 38853462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 19035134 - 19035188
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||| |||||||||||||||| || |||||||||||||||||||||    
T  19035134 attttgagaattgctgttcccacatatagtttgactgtgccacacgagtaaaata 19035188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 28886523 - 28886486
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28886523 tgttcccacatatagtatggctgtgccacacgagtaaa 28886486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 28876580 - 28876626
Alignment:
Q  175 aattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||    
T  28876580 aattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 28876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 8580621 - 8580572
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||| | |||||||||||||| | |||||||||||||||||||    
T  8580621 ttagagaattgctattcccacatatagtttagctgtgccacacgagtaaa 8580572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 37814516 - 37814565
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  37814516 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 37814565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 14279792 - 14279828
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14279792 tgttcccacatatagtatggctgtgccacaccagtaa 14279828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 27659874 - 27659920
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  27659874 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 27659920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 28238072 - 28238122
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| | ||||||||| | || ||||||||||||||||||||||||    
T  28238072 agagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaata 28238122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39743288 - 39743238
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  39743288 agagaattgttgttcccacatttgataaggctgtgccacactagtaaaata 39743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 5700 - 5757
Alignment:
Q  161 caattcatttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||  ||| |||||||||||||||| | || | |||||||||||||||||||    
T  5700 caattcattctgagtattgttgttcccacatttggtttagctgtgccacacgagtaaa 5757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 27867959 - 27867910
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  27867959 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaaata 27867910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 34124073 - 34124025
Alignment:
Q  173 agaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||| || || || |||||||||| |||||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaaata 34124025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 13182238 - 13182188
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13182238 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 13182188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 1089723 - 1089674
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1089723 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 1089674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 6181930 - 6181881
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6181930 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 6181881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 13173168 - 13173217
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13173168 gagaattgatgttcccacatatagtatggctgtgccacacgagtaaaata 13173217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 40352300 - 40352349
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40352300 gagaattgttgttcccacatatagtatggttgtgccacacgagtaaaata 40352349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 49090381 - 49090430
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49090381 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 49090430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 6175780 - 6175830
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6175780 agagtattgttgttcccacatatagtttggctgtgccacacgagtaaaata 6175830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 30726881 - 30726831
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30726881 agagaattgctgttcccacatatagtatggatgtgccacacgagtaaaata 30726831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 41801077 - 41801027
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  41801077 agagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaata 41801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 41793261 - 41793314
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  41793261 tttagagaattgctgttcccacatatagtttggctgtgccatacgagtaaaata 41793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 1305341 - 1305390
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  1305341 agagaattgttcttcccacatatagtatggctgtg-cacacgagtaaaata 1305390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 51037606 - 51037560
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||    
T  51037606 gagaattgttgttcccacatttagtttggctgtgccacacgagtaaa 51037560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 1087794 - 1087843
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  1087794 gagaattgctgttcccacatatagtatggctgtgccacatcagtaaaata 1087843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 9893399 - 9893354
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  9893399 attgctgttcccacatatagtatggctgtgccacacaagtaaaata 9893354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 26932515 - 26932564
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  26932515 ttagagaattgctgttcccacatatagtttggctgtgtcacacgagtaaa 26932564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 31421640 - 31421689
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  31421640 gagaattgctgttctcacatatagtatggctgtgccacaccagtaaaata 31421689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 31425457 - 31425408
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  31425457 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 31425408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 49096490 - 49096441
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  49096490 gagaattgctgttcccacatatagtttggttgtgccacacgagtaaaata 49096441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 52529147 - 52529192
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  52529147 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 52529192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 54634154 - 54634109
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  54634154 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 54634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 55799699 - 55799650
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  55799699 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 55799650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 1309252 - 1309204
Alignment:
Q  173 agaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  1309252 agaattgctgctcccacatatagtatggttgtgccacacgagtaaaata 1309204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 30723053 - 30723104
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  30723053 tagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 30723104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 37563421 - 37563374
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  37563421 tagagaattgctgttcccacatatggtaaggctgtgccacacgagtaa 37563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 26792383 - 26792337
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || |||||||||||||||||||||    
T  26792383 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 26792337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39773681 - 39773631
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  39773681 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 39773631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 38368166 - 38368211
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  38368166 gagaattgttgttcccacatttagtttggctatgccacacgagtaa 38368211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 49169236 - 49169187
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  49169236 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 49169187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 40833749 - 40833702
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||| | || | |||||||||||||||||||||    
T  40833749 agagaattgttgttcccacttttactttggctgtgccacacgagtaaa 40833702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 7485800 - 7485754
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||| | || ||||| ||||||||||||||    
T  7485800 agagaattgttgttcccacatttggtttggctatgccacacgagtaa 7485754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 21023026 - 21022980
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  21023026 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 21022980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 23220613 - 23220659
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  23220613 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 23220659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 46253421 - 46253467
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||  |||||||||||||||| ||| |||||||||||||||||    
T  46253421 gagaattactgttcccacatatagtttggttgtgccacacgagtaaa 46253467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 46254586 - 46254540
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | |||| |||||||||||||| ||||||    
T  46254586 gagaattgttgttcccacttttagtttggctgtgccacacaagtaaa 46254540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 49164997 - 49165044
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  49164997 gagaattgctgttccca--tatagtatggttgtgccacacgagtaaaata 49165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 54633745 - 54633795
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || || |||||||||||||||||||||    
T  54633745 agagaattgctgttcccacatgttgtttgactgtgccacacgagtaaaata 54633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 55587292 - 55587338
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||| | || ||||| ||||||||||||||    
T  55587292 agagaattgttgttcccacatttggtttggctatgccacacgagtaa 55587338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 9889928 - 9889977
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  9889928 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaata 9889977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 23221805 - 23221760
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||| | || ||||| ||||||||||||||    
T  23221805 gagaattgttgttcccacatttggtttggctatgccacacgagtaa 23221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 29307603 - 29307554
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||| ||||| | || ||| |||||||||||||||||    
T  29307603 ttagagaattgttgttctcacatttggtttggttgtgccacacgagtaaa 29307554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 37562999 - 37563048
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || |||||||| |||||||||||||||    
T  37562999 gagaattgctgttcccacatgttgtttggctgtgtcacacgagtaaaata 37563048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 49566580 - 49566544
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||| |||||||||| |||||    
T  49566580 tgttcccacatatagtatggttgtgccacaccagtaa 49566544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 55588425 - 55588377
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||| ||||||||||| | || ||||| ||||||||||||||    
T  55588425 ttagagaattgctgttcccacatttggtttggctatgccacacgagtaa 55588377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 30497089 - 30497039
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30497089 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 30497039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 15831061 - 15831110
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831061 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 15831110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 17426538 - 17426488
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17426538 agagaattgttgttcccacatatagtttggctgtgccacacgagtaaaata 17426488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39800792 - 39800742
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39800792 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 39800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 42505902 - 42505852
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42505902 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 42505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 3940864 - 3940819
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3940864 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 3940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 17420502 - 17420551
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17420502 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 17420551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 39793897 - 39793946
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39793897 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 39793946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 5351897 - 5351947
Alignment:
Q  172 gagaattgttgttcccacatatagtatg-gctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5351897 gagaattgttgttcccacatatagtatgcgctgtgccacacgagtaaaata 5351947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 15835355 - 15835301
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  15835355 atttagagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 15835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 28468575 - 28468624
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  28468575 gagaattgttgttcccacgtatagtttggctgtgccacacgagtaaaata 28468624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 38945696 - 38945741
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  38945696 gagaattgctgttcccacatatagtatggctgtgccacacgagtaa 38945741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 42499687 - 42499736
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42499687 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaata 42499736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 43978474 - 43978519
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  43978474 attgctgttcccacatatagtatggctgtgccacacgagtaaaata 43978519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 45428550 - 45428599
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  45428550 gagaattgttgttcccacatataatatggctgtgtcacacgagtaaaata 45428599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 3935768 - 3935813
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  3935768 attgctgttcccacatatagtttggctgtgccacacgagtaaaata 3935813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 43539873 - 43539828
Alignment:
Q  175 aattgttgttcccacatatagtatggctgtgccacacgagtaaaat 220  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  43539873 aattgttgttcccacatatagtatggttgtgccacaccagtaaaat 43539828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 44100937 - 44100888
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  44100937 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 44100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 3085970 - 3086017
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  3085970 agagaattgttgttcccacatttagtttggttgtgccacacgagtaaa 3086017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 5355671 - 5355621
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  5355671 agagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 5355621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 20937832 - 20937878
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || |||||||||||||||||||||    
T  20937832 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 20937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 21998148 - 21998194
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||    
T  21998148 gagaattgatgttcccacatatagtttggttgtgccacacgagtaaa 21998194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 28477205 - 28477163
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgag 214  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  28477205 gagaattgttgttcccacatatagtttggttgtgccacacgag 28477163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 30493292 - 30493342
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  30493292 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaata 30493342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 43536035 - 43536085
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  43536035 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaata 43536085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 29074144 - 29074095
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||| | || ||| |||||||||||||||||    
T  29074144 ttagagaattgttgttcccacatttggtttggttgtgccacacgagtaaa 29074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 41564627 - 41564582
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  41564627 attgttgttcccacatgttgtttggctgtgccacacgagtaaaata 41564582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 43984469 - 43984424
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  43984469 attgctgttcccacatatagtttggctgtgccacatgagtaaaata 43984424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 213583 - 213547
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  213583 tgttcccacatatagtatggctgtgccacaccagtaa 213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 10624596 - 10624560
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10624596 tgttcccacatatagtatggctgtgccacaccagtaa 10624560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 26543238 - 26543282
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagta 216  Q
    |||||||||||||||||||| | || |||||||||||||||||||    
T  26543238 gagaattgttgttcccacatttggtttggctgtgccacacgagta 26543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 41559980 - 41560020
Alignment:
Q  177 ttgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  41559980 ttgttgttcccacatatactatggctgtgccacaccagtaa 41560020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 30803153 - 30803110
Alignment:
Q  175 aattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||| | || |||||||||||||||||||||    
T  30803153 aattgttgttcccacatttggtttggctgtgccacacgagtaaa 30803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 5351872 - 5351822
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||| ||||||||||| | || ||||||||||||||||||||||||    
T  5351872 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 5351822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 7267584 - 7267534
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||| |||||| | || ||||||||||||||||||||||||    
T  7267584 agagaattgctgtttccacatgttgtttggctgtgccacacgagtaaaata 7267534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 10424774 - 10424820
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  10424774 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 10424820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 27276514 - 27276464
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  27276514 agagaattgttgttcccacatgtgataaggctgtgccacactagtaaaata 27276464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 39033033 - 39033079
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || ||||||| |||||||||||||    
T  39033033 gagaattgttgttcccacatttggtttggctgtaccacacgagtaaa 39033079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 43619281 - 43619235
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  43619281 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 43619235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 208948 - 208993
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  208948 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 208993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 7262970 - 7263019
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  7262970 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaata 7263019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 39490104 - 39490055
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||| | || ||||| ||||||||| |||||    
T  39490104 ttagagaattgttgttcccacatttggtttggctatgccacacgggtaaa 39490055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 44100636 - 44100681
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||||||    
T  44100636 gagaattgctgttctcacatatggtatggctgtgccacatgagtaa 44100681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 1149403 - 1149455
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||| |  || || |||||||||| |||||||||    
T  1149403 ttagagaattgttgttcccacatttgataaggttgtgccacactagtaaaata 1149455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 5334519 - 5334555
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  5334519 tgttcccacatatagtagggctgtgccacaccagtaa 5334555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 10619942 - 10619982
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  10619942 tgttcccacatgttgtttggctgtgccacacgagtaaaata 10619982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 18003403 - 18003367
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||||||||||| || |||||    
T  18003403 tgttcccacatatagtatggctgtgccaaaccagtaa 18003367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 39947534 - 39947578
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagta 216  Q
    |||||||||||||||||||| | || | |||||||||||||||||    
T  39947534 gagaattgttgttcccacatttggttttgctgtgccacacgagta 39947578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 29008820 - 29008869
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29008820 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 29008869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 34045337 - 34045391
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34045337 atttggagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 34045391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 46388891 - 46388941
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46388891 agagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 46388941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 2968064 - 2968015
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2968064 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 2968015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 34051486 - 34051436
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  34051486 agagaattgctgttcccacatatagtttggctgtgccacacgagtaaaata 34051436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 42904322 - 42904272
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  42904322 agagaattgctgttcccacatatagtatggctgtgccacaccagtaaaata 42904272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 16444542 - 16444591
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  16444542 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaata 16444591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 46702164 - 46702115
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  46702164 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaata 46702115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 49144595 - 49144546
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  49144595 gagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaata 49144546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 54392171 - 54392118
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  54392171 tttagagtattgctgttcccacatatagtttggctgtgccacacgagtaaaata 54392118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 54386066 - 54386116
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||    
T  54386066 agagaattgctcttctcacatatagtatggctgtgccacacgagtaaaata 54386116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 1835084 - 1835129
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  1835084 gagaattgctgttcccacatatggtatggctgtgccacacgagtaa 1835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 2858095 - 2858046
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  2858095 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaata 2858046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 35743352 - 35743397
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  35743352 gagaattgttgttgctacatatagtatggctgtgccacacgagtaa 35743397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 41844503 - 41844458
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  41844503 gagaattgttgttcctacatatggtatggctgtgccacacgagtaa 41844458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 46406763 - 46406714
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  46406763 gagaattgctgttcccacatatagtttggctgtgtcacacgagtaaaata 46406714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 49138515 - 49138564
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  49138515 gagaattgctgttcccacatatagtttggctgtgccacatgagtaaaata 49138564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 50481522 - 50481473
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  50481522 gagaattgctgttcccacatatagtatggttgtgccacaccagtaaaata 50481473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 3493523 - 3493569
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||    
T  3493523 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaa 3493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 3497217 - 3497263
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||    
T  3497217 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaa 3497263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 3502035 - 3501985
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||| | || ||| ||||||||||||||||||||    
T  3502035 agagaattgttgttcccacatgttgtttggttgtgccacacgagtaaaata 3501985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 4002671 - 4002721
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||||||| | || |||||||||||||||||||||    
T  4002671 tttagagagttgttgttcccacatttggtttggctgtgccacacgagtaaa 4002721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 12897755 - 12897805
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||||| | | || |||||||||||||||||||||    
T  12897755 tttagagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 12897805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 2950267 - 2950316
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||| |||| |||||||||||||||    
T  2950267 gagaattgctgttcccacatatagtttggttgtgtcacacgagtaaaata 2950316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 16851061 - 16851106
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16851061 gagaattgttgttcccacatttagtttggctatgccacacgagtaa 16851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 35743719 - 35743670
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  35743719 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 35743670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 42900111 - 42900160
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||||||| | || ||||||||||||||||||||||||    
T  42900111 gagagttgttgttcccacatgttgtttggctgtgccacacgagtaaaata 42900160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 46697645 - 46697694
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  46697645 gagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaata 46697694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 3948671 - 3948707
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3948671 tgttcccacatatagtatggctgtgccacaccagtaa 3948707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 8161100 - 8161064
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8161100 tgttcccacatatagtatggctgtgccacaccagtaa 8161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 34543276 - 34543228
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||||| | || ||||||||||||| |||||||    
T  34543276 tagagaattgttgttcccacatttggtttggctgtgccacatgagtaaa 34543228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 27739710 - 27739659
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||| |||||||||||||||||| | | || |||||||||||||||||||||    
T  27739710 attttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 27739659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 41844081 - 41844132
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||| | ||||||||| | || ||||||||||||||||||||||||    
T  41844081 tagagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaata 41844132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 6745466 - 6745416
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||| ||||||||||| | || ||||||||||||||||||||||||    
T  6745466 agagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 6745416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 26245270 - 26245316
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | |  |||||||||||||||||||||||    
T  26245270 gagaattgttgttcccacttttgatatggctgtgccacacgagtaaa 26245316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 50998818 - 50998772
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||| ||| | || |||||||||||||||||||||    
T  50998818 gagaattgttgttcccgcatttggtttggctgtgccacacgagtaaa 50998772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 3953350 - 3953305
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  3953350 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 3953305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 3975665 - 3975710
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagta 216  Q
    ||||||||||||| ||||||| | || |||||||||||||||||||    
T  3975665 agagaattgttgtacccacatttggtttggctgtgccacacgagta 3975710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 8156446 - 8156491
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  8156446 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 8156491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 30943127 - 30943172
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  30943127 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 30943172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 50477114 - 50477163
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| | || || |||||||||| ||||||||||    
T  50477114 gagaattgttgttcccacatcttgtttgactgtgccacatgagtaaaata 50477163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 30947784 - 30947748
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    |||||||||||||||||||| |||||||||| |||||    
T  30947784 tgttcccacatatagtatggttgtgccacaccagtaa 30947748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 30889995 - 30890044
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30889995 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 30890044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 3732492 - 3732443
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3732492 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 3732443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 19924689 - 19924738
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19924689 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 19924738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 26879434 - 26879385
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26879434 gagaattgttgttcccacatatagtatggctgtgccacaccagtaaaata 26879385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 38633292 - 38633246
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  38633292 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaa 38633246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 44621257 - 44621207
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  44621257 agagaattgttgttcccacgtatagtatggttgtgccacacgagtaaaata 44621207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 13629338 - 13629387
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  13629338 gagaattgctgttcccacatatagtatggttgtgccacacgagtaaaata 13629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 22397754 - 22397803
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  22397754 gagaattgttgttcccacgtatagtaaggctgtgccacacgagtaaaata 22397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 8473717 - 8473766
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  8473717 gagaattactgttcccacatatagtatggatgtgccacacgagtaaaata 8473766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 3728668 - 3728718
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  3728668 agagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaata 3728718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 19914401 - 19914447
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || |||||||||||||||||||||    
T  19914401 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaa 19914447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 8548808 - 8548759
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  8548808 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 8548759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 19928984 - 19928935
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  19928984 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 19928935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 26875627 - 26875676
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| | ||||||| ||||||||||||||||||||| |||||||||    
T  26875627 gagaattgctattcccacgtatagtatggctgtgccacaccagtaaaata 26875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 3983029 - 3983065
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3983029 tgttcccacatatagtatggctgtgccacaccagtaa 3983065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 20349400 - 20349436
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20349400 tgttcccacatatagtatggctgtgccacaccagtaa 20349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 31945992 - 31945956
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31945992 tgttcccacatatagtatggctgtgccacaccagtaa 31945956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 38776257 - 38776221
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  38776257 tgttcccacatatagtatggctgtgccacaccagtaa 38776221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 46319682 - 46319730
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||    
T  46319682 tagagaattgttgttcccacattacatatggctgtgccacacgagtaaa 46319730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 4883167 - 4883214
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||||    
T  4883167 agagaattgttgttcccacatttggtttggctgtgtcacacgagtaaa 4883214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 15047215 - 15047262
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||| ||| ||| |||||||||||||||||||||| |||||    
T  15047215 agagaattgttcttctcacgtatagtatggctgtgccacacgggtaaa 15047262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 253416 - 253370
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||    
T  253416 gagaattgttgttcccacattacgtaaggctgtgccacacgagtaaa 253370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 2365169 - 2365215
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||  | || |||||||||||||||||||||    
T  2365169 gagaattgttgttcccacaattggtttggctgtgccacacgagtaaa 2365215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 30195522 - 30195476
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || ||||| |||||||||||||||    
T  30195522 gagaattgttgttcccacatttggtttggctatgccacacgagtaaa 30195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 43011762 - 43011808
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  43011762 gagaattgttgttcccacttttggtttggctgtgccacacgagtaaa 43011808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 3993978 - 3993933
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  3993978 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 3993933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 5077875 - 5077924
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||| |  || ||||||||||||| |||||||||    
T  5077875 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaata 5077924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 20354070 - 20354025
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  20354070 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 20354025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 20556836 - 20556881
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  20556836 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 20556881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 38771567 - 38771612
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| ||||||||||| | || ||||||||||||||||||||||||    
T  38771567 attgctgttcccacatgttgtttggctgtgccacacgagtaaaata 38771612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 32161433 - 32161385
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||    || ||||||||||||||||||||    
T  32161433 tagagaattgttgttcccacattacataaggctgtgccacacgagtaaa 32161385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 11688047 - 11688097
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11688047 agagaattgttgttcccacatacagtatggctgtgccacacgagtaaaata 11688097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 27616649 - 27616698
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27616649 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 27616698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 11694199 - 11694150
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11694199 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaata 11694150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 18346973 - 18347020
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  18346973 tagagaattgttgttcccacatatagtatggttgtgccacatgagtaa 18347020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 30829786 - 30829741
Alignment:
Q  176 attgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  30829786 attgctgttcccacatatagtatggttgtgccacacgagtaaaata 30829741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 13382561 - 13382609
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||    
T  13382561 tagagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 13382609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 6207234 - 6207183
Alignment:
Q  170 tagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||| | |||||||||||||| || |||||||||||||||||||||    
T  6207234 tagagaattgcttttcccacatatagtttgactgtgccacacgagtaaaata 6207183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 13164395 - 13164349
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  13164395 gagaattgttgttcccacatttagtttggctatgccacacgagtaaa 13164349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 14012513 - 14012467
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| || || ||||||||||||||||||||    
T  14012513 gagaattgttgttcccacatttaataaggctgtgccacacgagtaaa 14012467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 30825984 - 30826033
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||||||||| | || ||||||||||||||||||||||||    
T  30825984 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaata 30826033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 1612878 - 1612842
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1612878 tgttcccacatatagtatggctgtgccacaccagtaa 1612842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 2109452 - 2109498
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | | || |||||||||||||||||||||    
T  2109452 gagaattgttgttcccactttttgtttggctgtgccacacgagtaaa 2109498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 6761010 - 6760964
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||| ||||||||||| | || |||||||||||||||||||||    
T  6761010 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 6760964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 8707912 - 8707962
Alignment:
Q  168 tttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||| ||||||||||||||||||| | || |||| ||||||||||||||||    
T  8707912 tttacagaattgttgttcccacatttggtttggccgtgccacacgagtaaa 8707962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 25554640 - 25554686
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||| | || | |||||||||||||||||||||    
T  25554640 gagaattgttgttcccacttttactttggctgtgccacacgagtaaa 25554686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 27641891 - 27641841
Alignment:
Q  171 agagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||| ||||||||||| | || |||||||||||||| |||||||||    
T  27641891 agagaattgctgttcccacatgttgtttggctgtgccacactagtaaaata 27641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 18351782 - 18351733
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| ||||| ||||| | || ||||||||||||||||||||||||    
T  18351782 gagaattgctgttctcacatgttgtttggctgtgccacacgagtaaaata 18351733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 100 - 51
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  100 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaata 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 41195 - 41146
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41195 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaata 41146  T

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Target: scaffold0293 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 858 - 812
Alignment:
Q  175 aattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  858 aattgttgttcccacatatagtatggctgtgccacatgagtaaaata 812  T

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Target: scaffold0744 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 561 - 512
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  561 gagaattgttgttcccacatatagtatggttgtgccacaccagtaaaata 512  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 84481 - 84530
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  84481 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaata 84530  T

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Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 301 - 250
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||||||||||||||| | || |||||||||||||| ||||||    
T  301 atttagagaattgttgttcccacatttggtttggctgtgccacacaagtaaa 250  T

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Target: scaffold0494 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 11592 - 11546
Alignment:
Q  172 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    |||||||||||||||||||| | || |||||||||||||||||||||    
T  11592 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaa 11546  T

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Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 760 - 814
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaaata 221  Q
    ||||||||||||| ||||||||||| |  || ||||||||||||| |||||||||    
T  760 atttagagaattgctgttcccacatgtgataaggctgtgccacaccagtaaaata 814  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 11723 - 11759
Alignment:
Q  181 tgttcccacatatagtatggctgtgccacacgagtaa 217  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11723 tgttcccacatatagtatggctgtgccacaccagtaa 11759  T

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Target: scaffold0634 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 7349 - 7396
Alignment:
Q  169 ttagagaattgttgttcccacatatagtatggctgtgccacacgagta 216  Q
    ||||||||||||||||||||||| | || |||||||| ||||||||||    
T  7349 ttagagaattgttgttcccacatctggtttggctgtgacacacgagta 7396  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 69364 - 69313
Alignment:
Q  167 atttagagaattgttgttcccacatatagtatggctgtgccacacgagtaaa 218  Q
    ||||||||||||| ||||||||| | | || |||||||||||||||||||||    
T  69364 atttagagaattgatgttcccacttttggtttggctgtgccacacgagtaaa 69313  T

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