View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10167_low_7 (Length: 540)
Name: NF10167_low_7
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10167_low_7 |
 |  |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-119; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 309 - 526
Target Start/End: Original strand, 45684920 - 45685137
Alignment:
Q |
309 |
attgaataaaatatgtacagaaatttatcaacgacacaagtggtagatatatggatcccttaaccatttgtcaacccctaaaacaaatctcaattatctt |
408 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45684920 |
attgaataaaatatgtacagaaatttatcaacgacacaagtggtagatatatggatcccttaaccatttgtcaacccctaaaacaaatctcaattatctt |
45685019 |
T |
 |
Q |
409 |
gcaattatgtaatcttacaactttagtttgcccataaaaatatgtacagaagtttgatatcttgtattagtttagtttttatcctattcaaaaatgtata |
508 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45685020 |
gcaattatgtaatcttacaactttagtttgcccataaaaatatgtacagaagtttgatatcttgtattagtttagtttttatcctattcaaaaatgtata |
45685119 |
T |
 |
Q |
509 |
tatccatgtattttttga |
526 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
45685120 |
tatccatgtattttttga |
45685137 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45684730 - 45684854
Alignment:
Q |
1 |
gtgttacagtacagctcagagttgaatctattgttttctttgacagaaagctgaagttagttagacagttaattcccagctatagtagttagtgtctgat |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
45684730 |
gtgttacagtacagctcagagttgaatctattgttttctttgacagaaagctgaagttagttagacagttaattcccagctatattagttagtgtctgat |
45684829 |
T |
 |
Q |
101 |
atattctcgatagctagttaagtgg |
125 |
Q |
|
|
||||||||||||||||||||||||| |
|
|
T |
45684830 |
atattctcgatagctagttaagtgg |
45684854 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 20186940 - 20186849
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
20186940 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagatcccacaaacactttg |
20186849 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 30339636 - 30339727
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30339636 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacctctacataaacatgtgacacgtgtcctagaccccacaaacactttg |
30339727 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 51787272 - 51787363
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
51787272 |
gagtggtgatacatgtacatccataggtggcatacacacttaaaccttcacataaacatgtgacacgtgctctagaccccacaaacactttg |
51787363 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 9673062 - 9672981
Alignment:
Q |
132 |
tgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacact |
214 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
9673062 |
tgatacatgtacacctataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctaga-tccacaaacact |
9672981 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 9672947 - 9672889
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
9672947 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
9672889 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 20186814 - 20186760
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
306 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20186814 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
20186760 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 51787396 - 51787453
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
51787396 |
agaatatgtgggg-tgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
51787453 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 30339760 - 30339818
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
30339760 |
agaatatgtgagggtgtatgagtggtataaaaatatgagtggtctaccaatcattttcc |
30339818 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 43740506 - 43740415
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||| |||| ||| |||||| | ||| ||||||||||| |||||| |||||||||| | ||| |||| ||| ||||||||||||| |
|
|
T |
43740506 |
gagtggtgatccatgaacatccatagatcacatgcacacttaaacctccacacaaacatgtgatatgtggcctaaacctcacaaacactttg |
43740415 |
T |
 |
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 48057798 - 48057707
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48057798 |
gagtggtgatacatgtacacccataggtggcatacatatttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
48057707 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 496683 - 496774
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
496683 |
gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatatgacacgtgtcctagaccccacaaacactttg |
496774 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 11765707 - 11765798
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
11765707 |
gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtccttgaccccacaaacactttg |
11765798 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 496807 - 496867
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat |
310 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
496807 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat |
496867 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 2286458 - 2286549
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||| |||||||||| ||||| || |||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |
|
|
T |
2286458 |
gagtagtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg |
2286549 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 42535313 - 42535222
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||| ||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||| |
|
|
T |
42535313 |
gagtgatgatatatgtacactcataggtgacatacacacttaaacctccacataaacatgtgacacgtgtcttatatcccacaaacactttg |
42535222 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 11765831 - 11765889
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11765831 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
11765889 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 25186032 - 25185942
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacacttt |
216 |
Q |
|
|
|||||||||| |||| |||| |||||||| ||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||| ||||| |
|
|
T |
25186032 |
gagtggtgatgcatgcacactcataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaatacttt |
25185942 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 42535189 - 42535130
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat |
310 |
Q |
|
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
42535189 |
agaatatgtgggg-tgtatgagtggtatggaaatatgagtggtctaccaatcattttccat |
42535130 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 23844642 - 23844726
Alignment:
Q |
133 |
gatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||| ||| |||||||| |||||||||| ||| ||||||||||||||||||| ||| |||||||| ||||||||||||| |
|
|
T |
23844642 |
gatacatgcacatccataggtaacatacacactcaaatctccacataaacatgtgacatgtgccctagacctcacaaacactttg |
23844726 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 7527359 - 7527272
Alignment:
Q |
130 |
ggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||| | | ||| |||||||||||||||||||| |||||| |||||||||||| ||| ||||||| ||| |||||||||| |
|
|
T |
7527359 |
ggtgatacatgcatattcattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagactccataaacactttg |
7527272 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 40855124 - 40855070
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
306 |
Q |
|
|
|||||||||||||||||| |||||||| |||||| ||||||||| |||||||||| |
|
|
T |
40855124 |
aatatgtgggggtgtatgggtggtatgaaaatataagtggtctaacaatcatttt |
40855070 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 23844761 - 23844826
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccattgaataa |
317 |
Q |
|
|
||||| ||||||||||| |||||||| ||||||||||||| || ||||||||||||||| ||||| |
|
|
T |
23844761 |
aatatatgggggtgtataggtggtatgaaaatatgagtggtttatcaatcattttccattaaataa |
23844826 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 2286584 - 2286640
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||| || ||||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
T |
2286584 |
aatatatgagggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc |
2286640 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 31427361 - 31427268
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtg--gcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||| ||| ||||||||| ||||||| | |||||| ||| |||||| |||||||| ||| ||||| |||||||||||||| |
|
|
T |
31427361 |
gagtggtgatacatgcacatccataggtgtggcatacataattaaacctccgcataaatatgtgacatgtggtttagactccacaaacactttg |
31427268 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 31427215 - 31427170
Alignment:
Q |
261 |
gggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
306 |
Q |
|
|
|||||| || |||||||| ||||||||||||||||||||||||||| |
|
|
T |
31427215 |
gggtgtttgggtggtatgaaaatatgagtggtctaccaatcatttt |
31427170 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 7527237 - 7527181
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||| ||||| |||||| |||||| | || |||||||||||||||||||||||||| |
|
|
T |
7527237 |
aatatatggggctgtatgggtggtacgaaattatgagtggtctaccaatcattttcc |
7527181 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 49786397 - 49786484
Alignment:
Q |
130 |
ggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
49786397 |
ggtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
49786484 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 8436996 - 8436904
Alignment:
Q |
125 |
ggagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||||| |||||||||||||||||||||||||| |||||| || ||||||| || ||||||||||| |||||||||||||||||||| |
|
|
T |
8436996 |
ggagtggtgatatatgtacacccataggtggcatacacatttaaacctctacataaatatatgacacgtgtcttagaccccacaaacactttg |
8436904 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 47940826 - 47940917
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||| |||||||||| ||||| || |||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |
|
|
T |
47940826 |
gagtagtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg |
47940917 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 8436871 - 8436813
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
8436871 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
8436813 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 8152977 - 8153070
Alignment:
Q |
126 |
gagtggtgatacatgt--acacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||||||| | ||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||| |
|
|
T |
8152977 |
gagtggtgatacatatgcacacctataggtggcatacacacctaaacctccacataaacatgtgacatgtggcctagactccacaaacactttg |
8153070 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 49786519 - 49786583
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccattgaata |
316 |
Q |
|
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |
|
|
T |
49786519 |
aatatgtgggggtgtatgagtggtatgaaaatatgagtggtctaccaatcatttttcatagaata |
49786583 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 29836868 - 29836784
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaa |
210 |
Q |
|
|
||||||||||||||| |||| |||||||||||||||||||||||| |||||| ||| |||| ||| || |||| |||||||||| |
|
|
T |
29836868 |
gagtggtgatacatgcacactcataggtggcatacacacttaaacctccacacaaatatgtaacatatgacctacaccccacaaa |
29836784 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 48779066 - 48778982
Alignment:
Q |
132 |
tgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacacttt |
216 |
Q |
|
|
||||||||| ||||| ||||||||||||| || |||||| |||||||||| |||||||| ||| |||||| ||| ||||||||| |
|
|
T |
48779066 |
tgatacatgcacacctataggtggcatactcatttaaacatccacataaatatgtgacatgtggtctagactccataaacacttt |
48778982 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 47940952 - 47940998
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctacca |
298 |
Q |
|
|
||||| |||||||||||| |||||||| || |||||||||||||||| |
|
|
T |
47940952 |
aatatatgggggtgtatgggtggtatgaaattatgagtggtctacca |
47940998 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 13922185 - 13922276
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13922185 |
gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacgtaaacatgtgacacgtgtcctagaccccacaaacactttg |
13922276 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 11828960 - 11829048
Alignment:
Q |
129 |
tggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||| ||||| |||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
T |
11828960 |
tggtgagacatgcacactcataggtggcatacacacttaaacctccacataaatatgtgacatgtgtcctagaccccacaaacactttg |
11829048 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 13922309 - 13922370
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt |
311 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13922309 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt |
13922370 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 11829083 - 11829139
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
|||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |
|
|
T |
11829083 |
aatatgtgggggtgtatgggtggtatgaaaatataagtggtctaccaatcattttcc |
11829139 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 38280371 - 38280281
Alignment:
Q |
127 |
agtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38280371 |
agtggtgatacatgtacatccataggtggtatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
38280281 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 25956059 - 25955968
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |
|
|
T |
25956059 |
gagtggtgatacatgcacactcataggtggcatacacatttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg |
25955968 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 38280248 - 38280187
Alignment:
Q |
250 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt |
311 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38280248 |
agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt |
38280187 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 42250116 - 42250207
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||| ||||||||| || |||| |||||||||| |||||| |||||||||||| ||| | |||||||||||||||||||| |
|
|
T |
42250116 |
gagtggtgatacatgcacacccataaatgacatagacacttaaacctccacacaaacatgtgacatgtggcttagaccccacaaacactttg |
42250207 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 1501468 - 1501377
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||| | | ||||||||| ||||||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||||| |
|
|
T |
1501468 |
gagtggtgatacatgcagatccataggtgacatacacacttaaacctccacataaacatatgacatgtagcctagaccccatatacactttg |
1501377 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 1501334 - 1501287
Alignment:
Q |
259 |
gggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
306 |
Q |
|
|
||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
T |
1501334 |
gggggtgtatgtgtggtatgaaaatatgagtggtctaccaatcatttt |
1501287 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 25955933 - 25955876
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcca |
309 |
Q |
|
|
||||||| |||||||||| ||| |||| || ||||||||||||||||||||||||||| |
|
|
T |
25955933 |
aatatgtaggggtgtatgggtgatatgaaattatgagtggtctaccaatcattttcca |
25955876 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 7886355 - 7886437
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccaca |
208 |
Q |
|
|
|||||||||| |||| | || ||||||| ||||||||||||||| |||||| |||||||||||| ||| |||| | |||||| |
|
|
T |
7886355 |
gagtggtgattcatgcatacttataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctaaatcccaca |
7886437 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 38951524 - 38951570
Alignment:
Q |
260 |
ggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt |
306 |
Q |
|
|
|||||||||| |||||||| |||||||||||||||| |||||||||| |
|
|
T |
38951524 |
ggggtgtatgggtggtatgaaaatatgagtggtctatcaatcatttt |
38951570 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 42250242 - 42250299
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcca |
309 |
Q |
|
|
|||||||||||||| | | ||| |||| || ||||||||||||||||||||||||||| |
|
|
T |
42250242 |
aatatgtgggggtgcacgggtgatatgaaattatgagtggtctaccaatcattttcca |
42250299 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 7886489 - 7886530
Alignment:
Q |
261 |
gggtgtatgagtggtatggaaatatgagtggtctaccaatca |
302 |
Q |
|
|
||||||||| |||||||| |||||| |||||||||||||||| |
|
|
T |
7886489 |
gggtgtatgggtggtatgaaaatattagtggtctaccaatca |
7886530 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 52055247 - 52055156
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||||||||||||| ||| |||||||||||||||||||||||| || ||| |||||||||||| ||| |||||||||||||||||||||| |
|
|
T |
52055247 |
gagtggtgatacatgcacattcataggtggcatacacacttaaacctctacacaaacatgtgacatgtggcctagaccccacaaacactttg |
52055156 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 1158354 - 1158263
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||| ||||||||| ||| | |||| ||| ||||||||||||| |||||| |||||||||||| ||| ||||||||| ||||||| |||| |
|
|
T |
1158354 |
gagtgatgatacatgcacatcgatagaaggcgtacacacttaaacctccacacaaacatgtgacatgtggcctagaccctacaaacattttg |
1158263 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 49866785 - 49866821
Alignment:
Q |
272 |
tggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||| |
|
|
T |
49866785 |
tggtatgaaaatatgagtggtctaccaatcattttcc |
49866821 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 52055121 - 52055065
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
|||||||| ||||||||| || |||| || |||||||||||||||||||||||||| |
|
|
T |
52055121 |
aatatgtgagggtgtatggatgttatgaaattatgagtggtctaccaatcattttcc |
52055065 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 4077043 - 4076952
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
||||| ||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| |||| |
|
|
T |
4077043 |
gagtgatgatacatgcatacccataggtggcatacacacttaaacctccacacaaacatgtgacatgtagcctagaccccacaaacaatttg |
4076952 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 3780453 - 3780367
Alignment:
Q |
131 |
gtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
|
|||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||| || |||| |||| | |||||||||| |
|
|
T |
3780453 |
gtgatacatgtacatccataggtggcatacacactcaaacctccacacaaacatgtgacatgtagcctaaacccgagaaacactttg |
3780367 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 3780332 - 3780276
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
T |
3780332 |
aatatgtaggggtgtatgggtggtatgaaaatatgagtggtctaccaatcattttcc |
3780276 |
T |
 |
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 4076917 - 4076861
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
|||| |||| |||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
T |
4076917 |
aataagtggaggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc |
4076861 |
T |
 |
Back To:
[
HSP Overview ] [
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Alignment Overview ]
Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 33594618 - 33594527
Alignment:
Q |
126 |
gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg |
217 |
Q |
|
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|||| |||||||||| ||| |||| |||||||||||||||||||| | |||| |||||||||||| ||| ||||||||||||||| |||||| |
|
|
T |
33594618 |
gagtagtgatacatgcacatccattggtggcatacacacttaaaccttcacacaaacatgtgacatgtggcctagaccccacaaatactttg |
33594527 |
T |
 |
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HSP Overview ] [
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Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 33594492 - 33594436
Alignment:
Q |
252 |
aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc |
308 |
Q |
|
|
||||| |||||||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
T |
33594492 |
aatatatgggggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc |
33594436 |
T |
 |
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Alignment Overview ]
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