View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10167_low_7 (Length: 540)

Name: NF10167_low_7
Description: NF10167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10167_low_7
NF10167_low_7
[»] chr1 (11 HSPs)
chr1 (309-526)||(45684920-45685137)
chr1 (1-125)||(45684730-45684854)
chr1 (126-217)||(20186849-20186940)
chr1 (126-217)||(30339636-30339727)
chr1 (126-217)||(51787272-51787363)
chr1 (132-214)||(9672981-9673062)
chr1 (250-308)||(9672889-9672947)
chr1 (252-306)||(20186760-20186814)
chr1 (250-308)||(51787396-51787453)
chr1 (250-308)||(30339760-30339818)
chr1 (126-217)||(43740415-43740506)
[»] chr7 (17 HSPs)
chr7 (126-217)||(48057707-48057798)
chr7 (126-217)||(496683-496774)
chr7 (126-217)||(11765707-11765798)
chr7 (250-310)||(496807-496867)
chr7 (126-217)||(2286458-2286549)
chr7 (126-217)||(42535222-42535313)
chr7 (250-308)||(11765831-11765889)
chr7 (126-216)||(25185942-25186032)
chr7 (250-310)||(42535130-42535189)
chr7 (133-217)||(23844642-23844726)
chr7 (130-217)||(7527272-7527359)
chr7 (252-306)||(40855070-40855124)
chr7 (252-317)||(23844761-23844826)
chr7 (252-308)||(2286584-2286640)
chr7 (126-217)||(31427268-31427361)
chr7 (261-306)||(31427170-31427215)
chr7 (252-308)||(7527181-7527237)
[»] chr3 (9 HSPs)
chr3 (130-217)||(49786397-49786484)
chr3 (125-217)||(8436904-8436996)
chr3 (126-217)||(47940826-47940917)
chr3 (250-308)||(8436813-8436871)
chr3 (126-217)||(8152977-8153070)
chr3 (252-316)||(49786519-49786583)
chr3 (126-210)||(29836784-29836868)
chr3 (132-216)||(48778982-48779066)
chr3 (252-298)||(47940952-47940998)
[»] chr2 (4 HSPs)
chr2 (126-217)||(13922185-13922276)
chr2 (129-217)||(11828960-11829048)
chr2 (250-311)||(13922309-13922370)
chr2 (252-308)||(11829083-11829139)
[»] chr5 (11 HSPs)
chr5 (127-217)||(38280281-38280371)
chr5 (126-217)||(25955968-25956059)
chr5 (250-311)||(38280187-38280248)
chr5 (126-217)||(42250116-42250207)
chr5 (126-217)||(1501377-1501468)
chr5 (259-306)||(1501287-1501334)
chr5 (252-309)||(25955876-25955933)
chr5 (126-208)||(7886355-7886437)
chr5 (260-306)||(38951524-38951570)
chr5 (252-309)||(42250242-42250299)
chr5 (261-302)||(7886489-7886530)
[»] chr4 (4 HSPs)
chr4 (126-217)||(52055156-52055247)
chr4 (126-217)||(1158263-1158354)
chr4 (272-308)||(49866785-49866821)
chr4 (252-308)||(52055065-52055121)
[»] chr8 (4 HSPs)
chr8 (126-217)||(4076952-4077043)
chr8 (131-217)||(3780367-3780453)
chr8 (252-308)||(3780276-3780332)
chr8 (252-308)||(4076861-4076917)
[»] chr6 (2 HSPs)
chr6 (126-217)||(33594527-33594618)
chr6 (252-308)||(33594436-33594492)


Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-119; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 309 - 526
Target Start/End: Original strand, 45684920 - 45685137
Alignment:
309 attgaataaaatatgtacagaaatttatcaacgacacaagtggtagatatatggatcccttaaccatttgtcaacccctaaaacaaatctcaattatctt 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
45684920 attgaataaaatatgtacagaaatttatcaacgacacaagtggtagatatatggatcccttaaccatttgtcaacccctaaaacaaatctcaattatctt 45685019  T
409 gcaattatgtaatcttacaactttagtttgcccataaaaatatgtacagaagtttgatatcttgtattagtttagtttttatcctattcaaaaatgtata 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
45685020 gcaattatgtaatcttacaactttagtttgcccataaaaatatgtacagaagtttgatatcttgtattagtttagtttttatcctattcaaaaatgtata 45685119  T
509 tatccatgtattttttga 526  Q
    ||||||||||||||||||    
45685120 tatccatgtattttttga 45685137  T

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Target: chr1; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45684730 - 45684854
Alignment:
1 gtgttacagtacagctcagagttgaatctattgttttctttgacagaaagctgaagttagttagacagttaattcccagctatagtagttagtgtctgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
45684730 gtgttacagtacagctcagagttgaatctattgttttctttgacagaaagctgaagttagttagacagttaattcccagctatattagttagtgtctgat 45684829  T
101 atattctcgatagctagttaagtgg 125  Q
    |||||||||||||||||||||||||    
45684830 atattctcgatagctagttaagtgg 45684854  T

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Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 20186940 - 20186849
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
20186940 gagtggtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagatcccacaaacactttg 20186849  T

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Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 30339636 - 30339727
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
30339636 gagtggtgatacatgtacacccataggtggcatacacacttaaacctctacataaacatgtgacacgtgtcctagaccccacaaacactttg 30339727  T

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Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 51787272 - 51787363
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||  |||||||||||||||||||||    
51787272 gagtggtgatacatgtacatccataggtggcatacacacttaaaccttcacataaacatgtgacacgtgctctagaccccacaaacactttg 51787363  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 9673062 - 9672981
Alignment:
132 tgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacact 214  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||    
9673062 tgatacatgtacacctataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctaga-tccacaaacact 9672981  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 9672947 - 9672889
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
9672947 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 9672889  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 20186814 - 20186760
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20186814 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 20186760  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 51787396 - 51787453
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
51787396 agaatatgtgggg-tgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 51787453  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 30339760 - 30339818
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
30339760 agaatatgtgagggtgtatgagtggtataaaaatatgagtggtctaccaatcattttcc 30339818  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 43740506 - 43740415
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||| |||| ||| |||||| |  ||| ||||||||||| |||||| |||||||||| | ||| |||| ||| |||||||||||||    
43740506 gagtggtgatccatgaacatccatagatcacatgcacacttaaacctccacacaaacatgtgatatgtggcctaaacctcacaaacactttg 43740415  T

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Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 48057798 - 48057707
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
48057798 gagtggtgatacatgtacacccataggtggcatacatatttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 48057707  T

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Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 496683 - 496774
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
496683 gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatatgacacgtgtcctagaccccacaaacactttg 496774  T

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Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 11765707 - 11765798
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
11765707 gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtccttgaccccacaaacactttg 11765798  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 496807 - 496867
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
496807 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat 496867  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 2286458 - 2286549
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||| |||||||||| ||||| || |||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||    
2286458 gagtagtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg 2286549  T

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Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 42535313 - 42535222
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||    
42535313 gagtgatgatatatgtacactcataggtgacatacacacttaaacctccacataaacatgtgacacgtgtcttatatcccacaaacactttg 42535222  T

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Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 11765831 - 11765889
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
11765831 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 11765889  T

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Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 25186032 - 25185942
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacacttt 216  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||| |||||    
25186032 gagtggtgatgcatgcacactcataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaatacttt 25185942  T

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Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 42535189 - 42535130
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccat 310  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
42535189 agaatatgtgggg-tgtatgagtggtatggaaatatgagtggtctaccaatcattttccat 42535130  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 23844642 - 23844726
Alignment:
133 gatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||| ||| ||||||||  |||||||||| |||  ||||||||||||||||||| ||| |||||||| |||||||||||||    
23844642 gatacatgcacatccataggtaacatacacactcaaatctccacataaacatgtgacatgtgccctagacctcacaaacactttg 23844726  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 7527359 - 7527272
Alignment:
130 ggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||| | |  ||| |||||||||||||||||||| |||||| |||||||||||| ||| ||||||| ||| ||||||||||    
7527359 ggtgatacatgcatattcattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagactccataaacactttg 7527272  T

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Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 40855124 - 40855070
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 306  Q
    |||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||    
40855124 aatatgtgggggtgtatgggtggtatgaaaatataagtggtctaacaatcatttt 40855070  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 23844761 - 23844826
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccattgaataa 317  Q
    ||||| |||||||||||  |||||||| ||||||||||||| || ||||||||||||||| |||||    
23844761 aatatatgggggtgtataggtggtatgaaaatatgagtggtttatcaatcattttccattaaataa 23844826  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 2286584 - 2286640
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||| || ||||||||| |||||||| || ||||||||||||||||||||||||||    
2286584 aatatatgagggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc 2286640  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 31427361 - 31427268
Alignment:
126 gagtggtgatacatgtacacccataggtg--gcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||| ||| |||||||||  ||||||| | |||||| ||| |||||| |||||||| |||   ||||| ||||||||||||||    
31427361 gagtggtgatacatgcacatccataggtgtggcatacataattaaacctccgcataaatatgtgacatgtggtttagactccacaaacactttg 31427268  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 31427215 - 31427170
Alignment:
261 gggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 306  Q
    |||||| || |||||||| |||||||||||||||||||||||||||    
31427215 gggtgtttgggtggtatgaaaatatgagtggtctaccaatcatttt 31427170  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 7527237 - 7527181
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||| ||||| |||||| |||||| | || ||||||||||||||||||||||||||    
7527237 aatatatggggctgtatgggtggtacgaaattatgagtggtctaccaatcattttcc 7527181  T

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Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 49786397 - 49786484
Alignment:
130 ggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
49786397 ggtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttg 49786484  T

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Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 8436996 - 8436904
Alignment:
125 ggagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| || ||||||| || ||||||||||| ||||||||||||||||||||    
8436996 ggagtggtgatatatgtacacccataggtggcatacacatttaaacctctacataaatatatgacacgtgtcttagaccccacaaacactttg 8436904  T

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Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 47940826 - 47940917
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||| |||||||||| ||||| || |||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||    
47940826 gagtagtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg 47940917  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 8436871 - 8436813
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
8436871 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 8436813  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 8152977 - 8153070
Alignment:
126 gagtggtgatacatgt--acacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||||||| |  ||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||    
8152977 gagtggtgatacatatgcacacctataggtggcatacacacctaaacctccacataaacatgtgacatgtggcctagactccacaaacactttg 8153070  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 49786519 - 49786583
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccattgaata 316  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
49786519 aatatgtgggggtgtatgagtggtatgaaaatatgagtggtctaccaatcatttttcatagaata 49786583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 29836868 - 29836784
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaa 210  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| |||||| ||| |||| |||  || |||| ||||||||||    
29836868 gagtggtgatacatgcacactcataggtggcatacacacttaaacctccacacaaatatgtaacatatgacctacaccccacaaa 29836784  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 48779066 - 48778982
Alignment:
132 tgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacacttt 216  Q
    ||||||||| ||||| ||||||||||||| || |||||| |||||||||| |||||||| |||  |||||| ||| |||||||||    
48779066 tgatacatgcacacctataggtggcatactcatttaaacatccacataaatatgtgacatgtggtctagactccataaacacttt 48778982  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 47940952 - 47940998
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctacca 298  Q
    ||||| |||||||||||| |||||||| || ||||||||||||||||    
47940952 aatatatgggggtgtatgggtggtatgaaattatgagtggtctacca 47940998  T

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Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 13922185 - 13922276
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
13922185 gagtggtgatacatgtacatccataggtggcatacacacttaaacctccacgtaaacatgtgacacgtgtcctagaccccacaaacactttg 13922276  T

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Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 11828960 - 11829048
Alignment:
129 tggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||| ||||| |||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
11828960 tggtgagacatgcacactcataggtggcatacacacttaaacctccacataaatatgtgacatgtgtcctagaccccacaaacactttg 11829048  T

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Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 13922309 - 13922370
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
13922309 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt 13922370  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 11829083 - 11829139
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||    
11829083 aatatgtgggggtgtatgggtggtatgaaaatataagtggtctaccaatcattttcc 11829139  T

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Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 38280371 - 38280281
Alignment:
127 agtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
38280371 agtggtgatacatgtacatccataggtggtatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttg 38280281  T

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Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 25956059 - 25955968
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||| |||||| |||||||||||| ||| ||||||||||||||||||||||    
25956059 gagtggtgatacatgcacactcataggtggcatacacatttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttg 25955968  T

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Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 38280248 - 38280187
Alignment:
250 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
38280248 agaatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttccatt 38280187  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 42250116 - 42250207
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||| |||||||||  || |||| |||||||||| |||||| |||||||||||| ||| | ||||||||||||||||||||    
42250116 gagtggtgatacatgcacacccataaatgacatagacacttaaacctccacacaaacatgtgacatgtggcttagaccccacaaacactttg 42250207  T

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Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 1501468 - 1501377
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||| | | ||||||||| ||||||||||||||| ||||||||||||| ||||| ||  ||||||||||| | ||||||||    
1501468 gagtggtgatacatgcagatccataggtgacatacacacttaaacctccacataaacatatgacatgtagcctagaccccatatacactttg 1501377  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 1501334 - 1501287
Alignment:
259 gggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 306  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
1501334 gggggtgtatgtgtggtatgaaaatatgagtggtctaccaatcatttt 1501287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 25955933 - 25955876
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcca 309  Q
    ||||||| |||||||||| ||| |||| || |||||||||||||||||||||||||||    
25955933 aatatgtaggggtgtatgggtgatatgaaattatgagtggtctaccaatcattttcca 25955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 7886355 - 7886437
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccaca 208  Q
    |||||||||| |||| | ||  ||||||| ||||||||||||||| |||||| |||||||||||| ||| |||| | ||||||    
7886355 gagtggtgattcatgcatacttataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctaaatcccaca 7886437  T

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Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 38951524 - 38951570
Alignment:
260 ggggtgtatgagtggtatggaaatatgagtggtctaccaatcatttt 306  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||    
38951524 ggggtgtatgggtggtatgaaaatatgagtggtctatcaatcatttt 38951570  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 42250242 - 42250299
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcca 309  Q
    |||||||||||||| | | ||| |||| || |||||||||||||||||||||||||||    
42250242 aatatgtgggggtgcacgggtgatatgaaattatgagtggtctaccaatcattttcca 42250299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 7886489 - 7886530
Alignment:
261 gggtgtatgagtggtatggaaatatgagtggtctaccaatca 302  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
7886489 gggtgtatgggtggtatgaaaatattagtggtctaccaatca 7886530  T

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Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 52055247 - 52055156
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| || ||| |||||||||||| ||| ||||||||||||||||||||||    
52055247 gagtggtgatacatgcacattcataggtggcatacacacttaaacctctacacaaacatgtgacatgtggcctagaccccacaaacactttg 52055156  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 1158354 - 1158263
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||| ||||||||| ||| | ||||  ||| ||||||||||||| |||||| |||||||||||| ||| ||||||||| ||||||| ||||    
1158354 gagtgatgatacatgcacatcgatagaaggcgtacacacttaaacctccacacaaacatgtgacatgtggcctagaccctacaaacattttg 1158263  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 49866785 - 49866821
Alignment:
272 tggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||||| |||||||||||||||||||||||||||||    
49866785 tggtatgaaaatatgagtggtctaccaatcattttcc 49866821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 52055121 - 52055065
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||||||| |||||||||  || |||| || ||||||||||||||||||||||||||    
52055121 aatatgtgagggtgtatggatgttatgaaattatgagtggtctaccaatcattttcc 52055065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 4077043 - 4076952
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||| ||  ||||||||||||||||| ||||    
4077043 gagtgatgatacatgcatacccataggtggcatacacacttaaacctccacacaaacatgtgacatgtagcctagaccccacaaacaatttg 4076952  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 3780453 - 3780367
Alignment:
131 gtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||| ||  |||| |||| | ||||||||||    
3780453 gtgatacatgtacatccataggtggcatacacactcaaacctccacacaaacatgtgacatgtagcctaaacccgagaaacactttg 3780367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 3780332 - 3780276
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
3780332 aatatgtaggggtgtatgggtggtatgaaaatatgagtggtctaccaatcattttcc 3780276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 4076917 - 4076861
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    |||| |||| |||||||| |||||||| || ||||||||||||||||||||||||||    
4076917 aataagtggaggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc 4076861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 33594618 - 33594527
Alignment:
126 gagtggtgatacatgtacacccataggtggcatacacacttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttg 217  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||| | |||| |||||||||||| ||| ||||||||||||||| ||||||    
33594618 gagtagtgatacatgcacatccattggtggcatacacacttaaaccttcacacaaacatgtgacatgtggcctagaccccacaaatactttg 33594527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 33594492 - 33594436
Alignment:
252 aatatgtgggggtgtatgagtggtatggaaatatgagtggtctaccaatcattttcc 308  Q
    ||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||    
33594492 aatatatgggggtgtatgggtggtatgaaattatgagtggtctaccaatcattttcc 33594436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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