View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10169_low_3 (Length: 295)
Name: NF10169_low_3
Description: NF10169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10169_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 46 - 279
Target Start/End: Complemental strand, 27780506 - 27780273
Alignment:
| Q |
46 |
acgagaagcatcacgtactatgtggtattggtactatgatataactagttaaacaattttttagtttcttataccaaccttccctccacggaagagttga |
145 |
Q |
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| T |
27780506 |
acgagaagcatcacgtactatgtggtattggtactattatataactagttaaacaattttttagtttcttataccaaccttccctccacggaagagttga |
27780407 |
T |
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| Q |
146 |
tatgcctcggacattaaatatgagtatcttttttcattgaaagagtttgacctattttacttgaagcaactctcatcggtgaaaatggaaatttattact |
245 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27780406 |
tatgccttggacattaaatatgagtatcttttttcattgaaagagtttgacctattttacttgaagcaactctcatcggtgaaaatggaaatttattact |
27780307 |
T |
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| Q |
246 |
cacttacaagttacaactctttgctggaatgtat |
279 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
27780306 |
cacttacaagttacaactctttgctggaatgtat |
27780273 |
T |
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