View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10170_low_12 (Length: 256)

Name: NF10170_low_12
Description: NF10170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10170_low_12
NF10170_low_12
[»] chr8 (24 HSPs)
chr8 (1-245)||(22904466-22904710)
chr8 (5-245)||(24221527-24221770)
chr8 (31-208)||(14162161-14162340)
chr8 (144-209)||(26012992-26013057)
chr8 (142-212)||(19792239-19792309)
chr8 (37-199)||(23221529-23221693)
chr8 (144-199)||(25396947-25397002)
chr8 (144-209)||(18162012-18162077)
chr8 (30-219)||(24341953-24342141)
chr8 (30-209)||(18008037-18008220)
chr8 (144-199)||(23193979-23194034)
chr8 (160-224)||(17515806-17515870)
chr8 (144-209)||(6279739-6279804)
chr8 (181-245)||(9317880-9317944)
chr8 (144-199)||(14351659-14351714)
chr8 (144-194)||(14878317-14878367)
chr8 (142-219)||(26854079-26854157)
chr8 (187-240)||(24967303-24967356)
chr8 (30-88)||(21139561-21139620)
chr8 (142-196)||(23503156-23503211)
chr8 (37-103)||(26853972-26854038)
chr8 (208-245)||(31469640-31469677)
chr8 (142-198)||(15636052-15636108)
chr8 (181-225)||(15759615-15759659)
[»] chr2 (33 HSPs)
chr2 (18-240)||(20852006-20852230)
chr2 (18-220)||(19124333-19124536)
chr2 (18-209)||(23257021-23257215)
chr2 (18-245)||(24321680-24321905)
chr2 (18-240)||(19013015-19013231)
chr2 (54-245)||(24371416-24371609)
chr2 (31-199)||(20281949-20282119)
chr2 (144-221)||(24820599-24820676)
chr2 (144-224)||(24824981-24825061)
chr2 (144-209)||(16134203-16134268)
chr2 (142-199)||(23340591-23340648)
chr2 (144-224)||(42767369-42767449)
chr2 (17-199)||(15583691-15583876)
chr2 (144-209)||(19929397-19929462)
chr2 (142-209)||(539207-539274)
chr2 (144-209)||(5499785-5499850)
chr2 (161-209)||(25481412-25481460)
chr2 (161-209)||(25489018-25489066)
chr2 (144-220)||(24023858-24023930)
chr2 (181-245)||(24507347-24507411)
chr2 (188-240)||(25858640-25858692)
chr2 (144-198)||(22578380-22578434)
chr2 (187-245)||(32441346-32441404)
chr2 (187-240)||(24366302-24366355)
chr2 (181-240)||(11391146-11391208)
chr2 (181-240)||(11407807-11407869)
chr2 (141-219)||(25337156-25337236)
chr2 (61-198)||(21436-21574)
chr2 (181-235)||(23139982-23140036)
chr2 (181-235)||(23551772-23551826)
chr2 (144-198)||(24018636-24018690)
chr2 (188-224)||(23295743-23295779)
chr2 (37-73)||(25858786-25858822)
[»] chr7 (50 HSPs)
chr7 (18-240)||(4983132-4983355)
chr7 (23-240)||(38877290-38877509)
chr7 (18-240)||(4541043-4541265)
chr7 (5-209)||(17911462-17911668)
chr7 (19-209)||(30063962-30064157)
chr7 (39-240)||(679481-679685)
chr7 (18-212)||(17206405-17206600)
chr7 (142-245)||(4460739-4460842)
chr7 (31-240)||(33609612-33609821)
chr7 (144-224)||(782773-782853)
chr7 (144-224)||(12561949-12562029)
chr7 (144-224)||(16076825-16076905)
chr7 (144-224)||(5840677-5840757)
chr7 (144-224)||(12567644-12567724)
chr7 (142-209)||(3376509-3376576)
chr7 (144-199)||(41722715-41722770)
chr7 (145-199)||(9264406-9264460)
chr7 (5-209)||(35964233-35964438)
chr7 (144-209)||(8787293-8787358)
chr7 (144-209)||(14941741-14941806)
chr7 (144-209)||(15369334-15369399)
chr7 (144-209)||(15707252-15707317)
chr7 (144-209)||(33612281-33612346)
chr7 (144-209)||(48355597-48355662)
chr7 (181-240)||(13434906-13434965)
chr7 (144-199)||(17946737-17946792)
chr7 (136-198)||(4465812-4465874)
chr7 (144-209)||(648798-648863)
chr7 (144-209)||(9004637-9004702)
chr7 (144-199)||(8780430-8780485)
chr7 (144-199)||(48340615-48340670)
chr7 (147-209)||(16097427-16097489)
chr7 (187-240)||(10204710-10204763)
chr7 (142-240)||(11483846-11483944)
chr7 (181-240)||(21005537-21005596)
chr7 (181-245)||(4313253-4313317)
chr7 (181-240)||(4307883-4307942)
chr7 (166-209)||(13731837-13731880)
chr7 (181-238)||(9193998-9194055)
chr7 (5-121)||(13434756-13434872)
chr7 (142-224)||(1613979-1614063)
chr7 (144-220)||(4316994-4317066)
chr7 (37-103)||(9264503-9264569)
chr7 (181-234)||(6257525-6257578)
chr7 (21-121)||(15522950-15523054)
chr7 (195-240)||(15523084-15523129)
chr7 (181-240)||(1462587-1462647)
chr7 (45-89)||(4465886-4465930)
chr7 (188-224)||(15173896-15173932)
chr7 (37-73)||(19515509-19515545)
[»] chr3 (32 HSPs)
chr3 (5-240)||(11869817-11870053)
chr3 (18-219)||(8685849-8686051)
chr3 (18-240)||(8531775-8531999)
chr3 (18-209)||(16703677-16703872)
chr3 (5-198)||(41545776-41545970)
chr3 (145-240)||(17023247-17023341)
chr3 (31-245)||(42244526-42244740)
chr3 (142-209)||(13069781-13069848)
chr3 (136-240)||(11577778-11577882)
chr3 (144-224)||(43842064-43842144)
chr3 (31-209)||(11398788-11398968)
chr3 (144-224)||(19656101-19656180)
chr3 (142-209)||(6236871-6236938)
chr3 (144-209)||(14494828-14494893)
chr3 (144-209)||(14976312-14976377)
chr3 (144-211)||(2721944-2722012)
chr3 (181-240)||(25765825-25765884)
chr3 (144-199)||(34053625-34053680)
chr3 (144-209)||(14660795-14660860)
chr3 (187-240)||(36076224-36076277)
chr3 (31-240)||(7908418-7908629)
chr3 (5-195)||(17041605-17041796)
chr3 (18-88)||(14659198-14659269)
chr3 (37-162)||(25054940-25055067)
chr3 (181-240)||(25055059-25055118)
chr3 (202-240)||(27992694-27992732)
chr3 (168-209)||(13605073-13605114)
chr3 (181-245)||(22038888-22038952)
chr3 (144-195)||(17050755-17050806)
chr3 (145-240)||(20225211-20225306)
chr3 (37-73)||(20225409-20225445)
chr3 (188-224)||(43496252-43496288)
[»] scaffold1559 (1 HSPs)
scaffold1559 (18-233)||(1286-1502)
[»] chr5 (20 HSPs)
chr5 (5-240)||(24166129-24166366)
chr5 (60-240)||(23029560-23029742)
chr5 (18-204)||(22170669-22170857)
chr5 (146-224)||(24214757-24214835)
chr5 (146-224)||(24220380-24220458)
chr5 (144-209)||(22942370-22942435)
chr5 (30-204)||(16676976-16677152)
chr5 (31-197)||(12410424-12410591)
chr5 (144-209)||(15059387-15059452)
chr5 (144-199)||(20915972-20916027)
chr5 (143-209)||(24165262-24165328)
chr5 (144-209)||(20169471-20169536)
chr5 (144-209)||(20967761-20967826)
chr5 (144-209)||(23343555-23343620)
chr5 (160-224)||(31057716-31057780)
chr5 (144-240)||(23114276-23114367)
chr5 (144-245)||(31758097-31758199)
chr5 (37-103)||(2953655-2953721)
chr5 (142-219)||(20738361-20738439)
chr5 (51-88)||(34223259-34223296)
[»] chr4 (32 HSPs)
chr4 (18-240)||(9487024-9487247)
chr4 (18-198)||(5513663-5513845)
chr4 (18-240)||(33330981-33331203)
chr4 (51-204)||(23793614-23793768)
chr4 (51-198)||(5675373-5675521)
chr4 (142-240)||(38652154-38652251)
chr4 (30-240)||(11922431-11922642)
chr4 (154-240)||(17168863-17168949)
chr4 (154-240)||(17174435-17174521)
chr4 (37-209)||(31593797-31593971)
chr4 (144-224)||(6518379-6518459)
chr4 (144-224)||(21102228-21102308)
chr4 (145-209)||(24125233-24125297)
chr4 (144-199)||(11888993-11889048)
chr4 (142-209)||(20059168-20059235)
chr4 (100-209)||(11902628-11902738)
chr4 (144-209)||(3355270-3355335)
chr4 (18-209)||(12345960-12346156)
chr4 (144-209)||(16951909-16951974)
chr4 (144-209)||(21275245-21275310)
chr4 (144-209)||(43701578-43701643)
chr4 (144-209)||(18287005-18287070)
chr4 (152-199)||(3772202-3772249)
chr4 (181-240)||(13622331-13622390)
chr4 (18-88)||(10731038-10731109)
chr4 (18-88)||(10944807-10944878)
chr4 (31-88)||(13622215-13622273)
chr4 (181-224)||(10731176-10731219)
chr4 (181-224)||(10944945-10944988)
chr4 (208-245)||(12347446-12347483)
chr4 (188-224)||(3391995-3392031)
chr4 (188-224)||(18080955-18080991)
[»] chr1 (30 HSPs)
chr1 (18-209)||(20860759-20860953)
chr1 (30-198)||(23298787-23298956)
chr1 (17-190)||(20899426-20899599)
chr1 (69-195)||(26194180-26194308)
chr1 (144-240)||(25405064-25405159)
chr1 (31-208)||(13799464-13799643)
chr1 (144-224)||(2386234-2386314)
chr1 (144-224)||(21792346-21792426)
chr1 (144-224)||(21784220-21784300)
chr1 (151-212)||(30819061-30819122)
chr1 (31-209)||(17716649-17716829)
chr1 (144-224)||(28206359-28206439)
chr1 (18-198)||(16384974-16385157)
chr1 (31-199)||(48256209-48256378)
chr1 (146-199)||(17986584-17986637)
chr1 (144-209)||(41802283-41802348)
chr1 (145-199)||(8648876-8648930)
chr1 (145-199)||(39286642-39286696)
chr1 (144-209)||(26134537-26134601)
chr1 (144-209)||(28207904-28207969)
chr1 (144-209)||(44538253-44538318)
chr1 (181-245)||(16431590-16431654)
chr1 (145-204)||(15346876-15346935)
chr1 (144-195)||(20412277-20412328)
chr1 (5-74)||(26192140-26192209)
chr1 (37-98)||(30819193-30819254)
chr1 (142-198)||(20493488-20493543)
chr1 (181-224)||(52235873-52235916)
chr1 (140-198)||(24680119-24680177)
chr1 (5-88)||(16431440-16431523)
[»] scaffold0014 (1 HSPs)
scaffold0014 (30-245)||(168089-168305)
[»] scaffold0855 (1 HSPs)
scaffold0855 (21-240)||(3352-3573)
[»] scaffold0847 (1 HSPs)
scaffold0847 (21-240)||(3517-3738)
[»] chr6 (62 HSPs)
chr6 (24-240)||(29682479-29682699)
chr6 (64-195)||(31965575-31965708)
chr6 (91-240)||(20222860-20223011)
chr6 (91-240)||(22116844-22116995)
chr6 (5-197)||(23348176-23348369)
chr6 (18-209)||(15172125-15172318)
chr6 (20-205)||(18973551-18973738)
chr6 (20-209)||(24392888-24393079)
chr6 (18-204)||(15471100-15471288)
chr6 (144-239)||(20221190-20221285)
chr6 (144-239)||(22115174-22115269)
chr6 (71-194)||(16207759-16207883)
chr6 (18-205)||(15162087-15162276)
chr6 (37-199)||(17793991-17794149)
chr6 (31-199)||(25949222-25949392)
chr6 (144-224)||(24218729-24218809)
chr6 (144-224)||(25402458-25402538)
chr6 (142-212)||(12660476-12660546)
chr6 (31-199)||(25963822-25963992)
chr6 (31-199)||(25968469-25968639)
chr6 (144-224)||(210137-210217)
chr6 (144-224)||(18448784-18448864)
chr6 (144-224)||(18844475-18844555)
chr6 (18-198)||(26821762-26821929)
chr6 (144-224)||(18854633-18854713)
chr6 (144-199)||(17743527-17743582)
chr6 (144-199)||(18233834-18233889)
chr6 (151-240)||(12658022-12658109)
chr6 (144-198)||(20464386-20464440)
chr6 (144-209)||(18195539-18195604)
chr6 (37-240)||(19612718-19612922)
chr6 (147-209)||(18184403-18184465)
chr6 (21-98)||(20221110-20221186)
chr6 (21-98)||(22115094-22115170)
chr6 (18-240)||(25339227-25339450)
chr6 (144-199)||(30245243-30245298)
chr6 (60-240)||(25923367-25923548)
chr6 (181-240)||(17284061-17284120)
chr6 (181-240)||(32543282-32543341)
chr6 (142-204)||(3923656-3923718)
chr6 (144-198)||(9414358-9414412)
chr6 (174-240)||(13217329-13217394)
chr6 (181-238)||(5399257-5399314)
chr6 (31-240)||(18627324-18627532)
chr6 (142-204)||(25031232-25031295)
chr6 (5-162)||(32543132-32543290)
chr6 (31-103)||(18993091-18993164)
chr6 (200-240)||(31965500-31965540)
chr6 (181-236)||(2197262-2197317)
chr6 (181-240)||(6794978-6795037)
chr6 (34-73)||(23524094-23524133)
chr6 (147-182)||(25507616-25507651)
chr6 (142-204)||(28734154-28734217)
chr6 (60-162)||(29093486-29093589)
chr6 (37-103)||(12658152-12658218)
chr6 (37-103)||(18396623-18396689)
chr6 (37-98)||(5399138-5399199)
chr6 (60-89)||(29686786-29686815)
chr6 (37-73)||(12660616-12660652)
chr6 (142-217)||(23517346-23517422)
chr6 (37-73)||(29253886-29253922)
chr6 (145-240)||(29253995-29254089)
[»] scaffold0001 (3 HSPs)
scaffold0001 (60-198)||(82631-82771)
scaffold0001 (144-224)||(425024-425104)
scaffold0001 (54-204)||(520669-520821)
[»] scaffold0074 (1 HSPs)
scaffold0074 (20-205)||(22753-22940)
[»] scaffold0088 (1 HSPs)
scaffold0088 (144-218)||(38505-38578)
[»] scaffold1323 (1 HSPs)
scaffold1323 (144-224)||(1903-1983)
[»] scaffold0123 (2 HSPs)
scaffold0123 (144-224)||(2521-2601)
scaffold0123 (37-199)||(14007-14165)
[»] scaffold1208 (1 HSPs)
scaffold1208 (144-223)||(1943-2022)
[»] scaffold0018 (1 HSPs)
scaffold0018 (144-221)||(18765-18842)
[»] scaffold0075 (1 HSPs)
scaffold0075 (144-224)||(19443-19523)
[»] scaffold0026 (1 HSPs)
scaffold0026 (144-224)||(13734-13814)
[»] scaffold0138 (2 HSPs)
scaffold0138 (142-224)||(27380-27462)
scaffold0138 (142-224)||(39376-39458)
[»] scaffold0447 (2 HSPs)
scaffold0447 (144-209)||(6431-6496)
scaffold0447 (144-209)||(11045-11110)
[»] scaffold0383 (1 HSPs)
scaffold0383 (144-209)||(9040-9105)
[»] scaffold0142 (2 HSPs)
scaffold0142 (144-221)||(21699-21776)
scaffold0142 (144-221)||(26846-26923)
[»] scaffold0471 (1 HSPs)
scaffold0471 (145-209)||(9821-9885)
[»] scaffold0037 (1 HSPs)
scaffold0037 (144-224)||(48407-48487)
[»] scaffold0031 (4 HSPs)
scaffold0031 (144-199)||(23277-23332)
scaffold0031 (142-209)||(100380-100447)
scaffold0031 (144-199)||(199-254)
scaffold0031 (144-199)||(77851-77906)
[»] scaffold0371 (1 HSPs)
scaffold0371 (144-209)||(9102-9167)
[»] scaffold0211 (1 HSPs)
scaffold0211 (144-209)||(17657-17722)
[»] scaffold0064 (1 HSPs)
scaffold0064 (144-209)||(48803-48868)
[»] scaffold0011 (2 HSPs)
scaffold0011 (144-209)||(163927-163992)
scaffold0011 (31-219)||(172633-172821)
[»] scaffold0362 (2 HSPs)
scaffold0362 (149-199)||(9235-9285)
scaffold0362 (37-88)||(9293-9345)
[»] scaffold0197 (1 HSPs)
scaffold0197 (151-209)||(8877-8935)
[»] scaffold0168 (2 HSPs)
scaffold0168 (145-199)||(8878-8932)
scaffold0168 (37-73)||(9005-9041)
[»] scaffold0251 (1 HSPs)
scaffold0251 (144-209)||(18956-19021)
[»] scaffold0058 (1 HSPs)
scaffold0058 (144-224)||(61857-61937)
[»] scaffold0006 (1 HSPs)
scaffold0006 (149-209)||(33972-34032)
[»] scaffold0213 (1 HSPs)
scaffold0213 (142-209)||(21658-21726)
[»] scaffold0096 (1 HSPs)
scaffold0096 (144-224)||(37948-38028)
[»] scaffold0916 (1 HSPs)
scaffold0916 (144-199)||(3525-3580)
[»] scaffold0084 (1 HSPs)
scaffold0084 (146-240)||(31666-31760)
[»] scaffold0012 (2 HSPs)
scaffold0012 (145-199)||(49904-49958)
scaffold0012 (37-73)||(49794-49830)
[»] scaffold0264 (2 HSPs)
scaffold0264 (181-245)||(22404-22468)
scaffold0264 (37-73)||(22551-22587)
[»] scaffold0098 (1 HSPs)
scaffold0098 (181-240)||(44285-44344)
[»] scaffold0057 (1 HSPs)
scaffold0057 (181-236)||(21202-21257)
[»] scaffold0673 (1 HSPs)
scaffold0673 (188-224)||(3215-3251)
[»] scaffold0231 (1 HSPs)
scaffold0231 (141-224)||(21330-21413)


Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 22904466 - 22904710
Alignment:
Q  1 tgcattttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904466 tgcattttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaa 22904565  T
Q  101 agtagttataggctataaataagcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904566 agtagttataggctataaataagcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcat 22904665  T
Q  201 ctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  22904666 ctttattttcttgttatttactttcatattcttcttcttcttctc 22904710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 24221770 - 24221527
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgttt-agtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    ||||||||||  | |||||||||| ||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  24221770 ttttgcttcctgatcaagctgccttttttagtttatttctgacctaaagcccatggtttcttgtggaacattctattgatggatttcttagggcttaagt 24221671  T
Q  104 -agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc 201  Q
     |||| ||| ||||||||| |||| |||||||||||||  |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||     
T  24221670 tagttttagactataaatagagcaactagcaaacatatacaatcattttttgttcttggaaattctaagtgacaattatttctttgaataaaagttcata 24221571  T
Q  202 tttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    |||||||||||||||||||||||||| || ||||||||| ||||    
T  24221570 tttattttcttgttatttactttcatgttattcttcttcttctc 24221527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 14162340 - 14162161
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| |||| |||||||| | ||||||| ||||||||||||||||||| |||| ||||| || || || ||||  || ||  ||||||||| || ||||    
T  14162340 ttagtttattcctgacctaaaagcccatggtttcttgtggaacattctagtgatatatttcttaggtcttaagtcattgtaaactataaatagagtagct 14162241  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattt 208  Q
    ||||  || |   ||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  14162240 agcagtcacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 14162161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 26012992 - 26013057
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  26012992 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 26013057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 19792309 - 19792239
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttctt 212  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  19792309 aatcatctttagttcttggaaataataagtgacaattgtttctttaaataaaaattcatctttattttctt 19792239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 199
Target Start/End: Complemental strand, 23221693 - 23221529
Alignment:
Q  37 tatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaa 134  Q
    ||||||||||||| | ||||||| |||| |||||||||||||| |||||||||  ||  |||| |||| | ||||  ||||||||| || ||||| | |     
T  23221693 tatttctgacctaaaagcccatggtttcatgtggaacattctagtgatgtattgcttatggcttaagtcgatataaactataaatagagtagctaactat 23221594  T
Q  135 catattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||   | ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  23221593 cataacaattcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaagttca 23221529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 25396947 - 25397002
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25396947 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 25397002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 18162012 - 18162077
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  18162012 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 18162077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 24341953 - 24342141
Alignment:
Q  30 tttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaata-agcagc 127  Q
    |||||| ||||||||||||| |||| ||| | ||||||| |||| | || |||| ||||| || ||||| |||| | |  ||||||||||||| |||||     
T  24341953 tttagtttatttctgacctaaagcctatggtgtcttgtgcaacactttagtgatttatttcttagggcttaagtcaatgttaggctataaatagagcagt 24342052  T
Q  128 tagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattt 219  Q
     | ||| | | |  ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||   |||||||||||||| |||||    
T  24342053 catcaagcttgtataatcatcttttgttcttagaaataataagtgacaattgtttcttttaataaaagt---tctttattttcttgctattt 24342141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 18008037 - 18008220
Alignment:
Q  30 tttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtattta--ttggggctaaagtagttataggctataaata-agcag 126  Q
    |||||| ||||||||| ||| |||||||| || ||||||||||||||||||||| ||| ||  |||||||| |||| ||| ||| ||||||||| || ||    
T  18008037 tttagtttatttctgaactaaagcccatggttccttgtggaacattctattgatatatatatcttggggcttaagttgttgtagactataaatagagtag 18008136  T
Q  127 ctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattg-tttctttgaataaaagttcatctttatttt 209  Q
    ||||||| |  |   ||||||||||||||||||||| | |  ||| ||||| | ||||||| ||||||||||| | ||||||||    
T  18008137 ctagcaatcgcaacaaatcatcttttgttcttggaattcaacagtaacaatggttttcttttaataaaagttcttttttatttt 18008220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 23194034 - 23193979
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23194034 tcatcttttgttcttggaaataataactgacaattgtttctttgaataaaagttca 23193979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 17515870 - 17515806
Alignment:
Q  160 gaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  17515870 gaaataataagtgacaattgtttctttgaataaaagttcacctttactttctcgttattttcttt 17515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 6279739 - 6279804
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  6279739 tcatcttttgctctctgaaataataagtgacaattgtttctttgaataaaagttctcctttatttt 6279804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 9317880 - 9317944
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| ||||    
T  9317880 ttcttggaataaaagttcacctttattttattgttatttacttttatgttcttcttcttcttctc 9317944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 14351714 - 14351659
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||||||||||||||    
T  14351714 tcatcttttgttctatgaaataataagtgacaattgttcctttgaataaaagttca 14351659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 14878367 - 14878317
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaa 194  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  14878367 tcatcttttcttcttgaaaataataagtgacaattgtttctttgaataaaa 14878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 26854079 - 26854157
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc-atctttattttcttgttattt 219  Q
    ||||||||||||||||||||| | |  ||||||||||||||  || |||||||||||  | ||||||||||||||||||    
T  26854079 aatcatcttttgttcttggaattcaatagtgacaattgttttctttaataaaagttctttttttattttcttgttattt 26854157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 24967303 - 24967356
Alignment:
Q  187 gaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||| ||||||||| || ||||||||||| || ||||||||||||    
T  24967303 gaataaaagttcacctttattttattcttatttacttttatgttcttcttcttc 24967356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 21139561 - 21139620
Alignment:
Q  30 tttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    |||||| ||||||||||||| | | ||||| ||||||||||||||||||| |||||||||    
T  21139561 tttagtttatttctgacctaaaagtccatggtttcttgtggaacattctagtgatgtatt 21139620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 23503156 - 23503211
Alignment:
Q  142 aatcatcttttgttcttggaaatta-taagtgacaattgtttctttgaataaaagt 196  Q
    ||||||||||||||||||||||| |  ||| ||||||||||| |||||||||||||    
T  23503156 aatcatcttttgttcttggaaataacaaagggacaattgtttgtttgaataaaagt 23503211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 26853972 - 26854038
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||||||||||||| ||||||||| |||| | || |||| || || |||||||| ||||    
T  26853972 tatttctgacctagagcccatgttttcttgtgcaacactttagtgatttaattcttggggctcaagt 26854038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 31469677 - 31469640
Alignment:
Q  208 ttcttgttatttactttcatattcttcttcttcatctc 245  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  31469677 ttcttgttatttactttcatgttcttcttcttaatctc 31469640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 15636052 - 15636108
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    ||||||||||||||||| | |||| |  ||||||||| ||||||||||| |||||||    
T  15636052 aatcatcttttgttcttaggaattctttgtgacaattatttctttgaatcaaagttc 15636108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 15759615 - 15759659
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttc 225  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||||    
T  15759615 ttcttggaataaaagttcacctttattttattattatttactttc 15759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 20852006 - 20852230
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  20852006 acaagctgcctgtttagtttatttctgacctaaagcccatggtttcttgtggaacattctattgatgtatttcttggggcttaagtagttataggctata 20852105  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaat-aaaagttcatctttattttcttgtt 215  Q
    |||| |||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20852106 aatagagcagcgagcaaacatattgtatcatcttttgttcttcgaaataataagtgacaattgtttctttgaataaaaagttcatctttattttcttgtt 20852205  T
Q  216 atttactttcatattcttcttcttc 240  Q
    |||||||||||| || |||||||||    
T  20852206 atttactttcatgttattcttcttc 20852230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 19124536 - 19124333
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||||||| |||||| ||||| |||| || |||||||| ||||||||| ||||||||||||||| |||| |||||||| |||||||| ||| |||||    
T  19124536 acaagctgcctatttagtttatttatgacataaagcccatggtttcttgtgaaacattctattgatgcatttcttggggcttaagtagttttagactata 19124437  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| || |||||||||||||||| | ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19124436 aatagagtagctagcaaacatattcattcatcttttgttcatgaaaataataagtgacaattgtttctttgaataaaagttcatctttattttcttgttg 19124337  T
Q  217 ttta 220  Q
    ||||    
T  19124336 ttta 19124333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 23257215 - 23257021
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| |||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||| ||| |||| |||||||| ||  |||||    
T  23257215 acaagcttcctgtttagtttatttctgacctaaagtccatggtttcttgtggaacattctattgatgtatttcttgtggcttaagtagttgtaaactata 23257116  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttcatctttatttt 209  Q
    |||| || ||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||||  |||||||||||||||||||||||||||    
T  23257115 aatagagtagctagcaaacatattgaatcatctcttgttcttggaatttaatagtgacaattgttttgctttgaataaaagttcatctttatttt 23257021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 24321680 - 24321905
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    |||||||||||||||| | |||||||||| || |||||||| |||||||||||| ||||||||||||||||| |||||| | |||||||| ||| |||||    
T  24321680 acaagctgcctgtttaatttatttctgacgtaaagcccatggtttcttgtggaatattctattgatgtatttgttggggtttaagtagttgtagactata 24321779  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaatt-ataagtgacaattgtttctttgaataaaagttcatctttattttcttgtt 215  Q
    |||| |||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||| || |    ||    
T  24321780 aatagagcacctggcaaacatattcaatcatcttttgttcttggaaattaataagtgacaattgtttatttgagtaaaagttcttcttttttgt----tt 24321875  T
Q  216 atttactttcatattcttcttcttcatctc 245  Q
    |||| ||||||| |||||||||||| ||||    
T  24321876 attttctttcatgttcttcttcttcttctc 24321905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 19013231 - 19013015
Alignment:
Q  18 acaagctgcctgttt-agtctatttctgacctagagcccatgatttcttgtggaacattc-tattgatgtatttattggggctaaagtagttataggcta 115  Q
    ||||||||||| ||| ||| ||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||| ||| |||    
T  19013231 acaagctgcctattttagtttatttctgacctaaagtccatggtttcttgtggaacattcctattgatgtatttcttggggcttaagtagttgtagacta 19013132  T
Q  116 taaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgt 214  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||  |    
T  19013131 taaatagagcagctaacaaacatattcaatcatcttttgttcttgg-------aagtgacaattgtttctttgaataaaagttcatcattattttct--t 19013041  T
Q  215 tatttactttcatattcttcttcttc 240  Q
    |||||  ||| || ||||||||||||    
T  19013040 tattttattttatgttcttcttcttc 19013015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 245
Target Start/End: Complemental strand, 24371609 - 24371416
Alignment:
Q  54 ccatgatttcttgtggaacattctattgatgtatttatt-ggggctaaagt-agttataggctataaata-agcagctagcaaacatattgaatcatctt 150  Q
    ||||| |||||||||||||||||||||||||||||| || |||||| |||| |||| ||| ||||||||| |||| |||||||||||||    |||||||    
T  24371609 ccatggtttcttgtggaacattctattgatgtatttctttggggcttaagttagttttagactataaatagagcatctagcaaacatatattttcatctt 24371510  T
Q  151 ttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||| || || ||||||||| ||||    
T  24371509 ttgttcttggaatttataagtgacaattgtttctttgaataaaatttc-tctctattttcttgttaattacttttatgttgttcttcttcttctc 24371416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 20281949 - 20282119
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | |||| || ||||||||||||||||||| |||||||||  || ||| | |||| | ||||| ||||||||| || ||||    
T  20281949 ttagtttatttctgacctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttagggtttaagtcgatatagactataaatagagtagct 20282048  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
     || | || |   | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20282049 ggctatcacaacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 20282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 24820676 - 24820599
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttac 221  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24820676 tcatcttttgttctttgaaataataagggacaattgtttctttgaataaaagttcacctttactttcttgttatttac 24820599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 24825061 - 24824981
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24825061 tcatcttttgttctctgaaataataagggacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 24824981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 16134268 - 16134203
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  16134268 tcatcttttgttctttgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 16134203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 23340591 - 23340648
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23340591 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 23340648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 42767449 - 42767369
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  42767449 tcatcttttgttatctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 42767369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 15583691 - 15583876
Alignment:
Q  17 aacaagctgcctgttt-agtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttat-aggct 114  Q
    |||||||||||| ||| ||| ||||||||||||| |||||||| ||||||||| |||| |  | |||| ||||| || ||| | ||||  || | || ||    
T  15583691 aacaagctgcctattttagtttatttctgacctaaagcccatggtttcttgtgcaacacttcagtgatttatttcttagggtttaagtcattgttagact 15583790  T
Q  115 ataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||| |||||| | ||||| | |    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  15583791 ataaatagagcagcgaccaaacttgtattctcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttca 15583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 19929397 - 19929462
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  19929397 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 19929462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 539207 - 539274
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  539207 aatcatcttttgttttctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 539274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 5499850 - 5499785
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||   |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  5499850 tcatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 5499785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 25481412 - 25481460
Alignment:
Q  161 aaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  25481412 aaataataagtgacaattgtttctttgaataaaagttcacctttatttt 25481460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 25489018 - 25489066
Alignment:
Q  161 aaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  25489018 aaataataagtgacaattgtttctttgaataaaagttcacctttatttt 25489066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 24023930 - 24023858
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattta 220  Q
    |||||||||||||||||||||| || ||||||| | |||||||||||||||||||    ||||||||||||| ||||    
T  24023930 tcatcttttgttcttggaaattttatgtgacaactatttctttgaataaaagttc----ttattttcttgttcttta 24023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 24507347 - 24507411
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| || ||||| |||||| ||||    
T  24507347 ttcttggaataaaagttcatctttattttattgttatttccttttatgttctttttcttcttctc 24507411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 25858692 - 25858640
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  25858692 aataaaagttcacctttattttattgttatttacttttatgttcttcttcttc 25858640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 22578434 - 22578380
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||||||||| ||||||||| || ||||||| | |||||||||||||||||||    
T  22578434 tcatcttttgtttttggaaattttatgtgacaactatttctttgaataaaagttc 22578380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 32441404 - 32441346
Alignment:
Q  187 gaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||||||||||| ||||||||| |||||||||||||| |  |||||||||||| ||||    
T  32441404 gaataaaagttcacctttattttattgttatttacttttacgttcttcttcttcttctc 32441346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 24366355 - 24366302
Alignment:
Q  187 gaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||| | ||||||| |||||||||||||| || ||||||||||||    
T  24366355 gaataaaagttcaccattattttattgttatttacttttatgttcttcttcttc 24366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 11391146 - 11391208
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttca---tattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| |   ||||||||||||||    
T  11391146 ttcttggaataaaagttcacctttattttattgttatttacttttacgttattcttcttcttc 11391208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 11407807 - 11407869
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttca---tattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| |   ||||||||||||||    
T  11407807 ttcttggaataaaagttcacctttattttattgttatttacttttacgttattcttcttcttc 11407869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 25337236 - 25337156
Alignment:
Q  141 gaatcatcttttgttcttggaaattataagtgacaattg-tttctttgaataaaagttcatc-tttattttcttgttattt 219  Q
    |||||||||||||||||||||| | |  ||||||||||| ||||| | ||||||||||| || |||| |||||||||||||    
T  25337236 gaatcatcttttgttcttggaattcaatagtgacaattgttttctcttaataaaagttcttcttttaatttcttgttattt 25337156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 21574 - 21436
Alignment:
Q  61 ttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttg 159  Q
    |||||||||||||||||| || | ||||| || ||||| ||||  || ||| ||||||||| || ||||||| | || |  || ||||||||||||||||    
T  21574 ttcttgtggaacattctagtgttatatttcttagggcttaagtcattgtagactataaatagagtagctagctatcacaacgattcatcttttgttcttg 21475  T
Q  160 gaaattataagtgacaattgt-ttctttgaataaaagttc 198  Q
    ||| | |  |||||||||||| |||||| |||||||||||    
T  21474 gaattaaatagtgacaattgtcttcttt-aataaaagttc 21436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 23140036 - 23139982
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttct 235  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||| | |||||||    
T  23140036 ttcttggaataaaagttcccctttattttattgttatttactttcttcttcttct 23139982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 23551826 - 23551772
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttct 235  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||| | |||||||    
T  23551826 ttcttggaataaaagttcccctttattttattgttatttactttcttcttcttct 23551772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 24018690 - 24018636
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||| |||||||||||| |||| || ||||||| | |||||||||||||||||||    
T  24018690 tcatgttttgttcttgggaattttatgtgacaactatttctttgaataaaagttc 24018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 23295779 - 23295743
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  23295779 aataaaagttcacctttactttcttgttatttacttt 23295743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 25858822 - 25858786
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  25858822 tatttctgacctagagcccatggtttcttgtgcaaca 25858786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 4983355 - 4983132
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    |||||||||||||||||| ||||||||||||| ||||| || |||||||||||||||| ||||||||||||| |||||||| |||||||| ||| |||||    
T  4983355 acaagctgcctgtttagtttatttctgacctaaagcccgtggtttcttgtggaacattatattgatgtatttcttggggcttaagtagttgtagcctata 4983256  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4983255 aatagagcagctagcaaacatattcaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 4983156  T
Q  217 tttactttcatattcttcttcttc 240  Q
    ||||| || || ||||||||||||    
T  4983155 tttacctttatgttcttcttcttc 4983132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 38877290 - 38877509
Alignment:
Q  23 ctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaat 120  Q
    |||||| |||||| || ||||||| || | ||||||| ||||||||||||||||||||||||||| || |||||||| |||| |||| ||||||||||||    
T  38877290 ctgcctttttagtgtaattctgacttaaaagcccatggtttcttgtggaacattctattgatgtaattcttggggcttaagttagttttaggctataaat 38877389  T
Q  121 a-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattt 219  Q
    | ||||| ||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  38877390 agagcagatagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc-tctttactttcttgttattt 38877488  T
Q  220 actttcatattcttcttcttc 240  Q
    ||||| || ||||| ||||||    
T  38877489 acttttatcttctttttcttc 38877509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 4541043 - 4541265
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||| ||||| |||||| ||||| ||||||| || ||||  |||||||||||||| ||||||||||||||| |||||||| |||||||| ||| |||||    
T  4541043 acaaggtgcctatttagtttatttgtgacctaaagtccatagtttcttgtggaacactctattgatgtatttcttggggcttaagtagttgtagactata 4541142  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| ||||| ||||||||| ||| | |||||||| |||| || |||| |||||||||||||||||||||||||||||||||| | ||||||| || |||    
T  4541143 aatagagcagttagcaaacacattcattcatctttcgttcgtgcaaataataagtgacaattgtttctttgaataaaagttca-ccttattttattatta 4541241  T
Q  217 tttactttcatattcttcttcttc 240  Q
    ||||||| ||| ||||||||||||    
T  4541242 tttacttccatgttcttcttcttc 4541265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 17911462 - 17911668
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagta 104  Q
    ||||||||| |  ||||||||||| |||||| ||||||||||||| |||   || |||||||||||||||||||||||||||||| |||||||| |||||    
T  17911462 ttttgcttctctgacaagctgcctatttagtttatttctgacctaaagcttgtggtttcttgtggaacattctattgatgtatttcttggggcttaagta 17911561  T
Q  105 gttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatct 202  Q
    ||  ||  ||||||||| || |||||||||| |||||||||||||| ||||||||||||||||  ||| |||||||||| ||||||||||||||||||||    
T  17911562 gtcgtaaactataaatagagtagctagcaaatatattgaatcatctcttgttcttggaaattaatagttacaattgtttcctttgaataaaagttcatct 17911661  T
Q  203 ttatttt 209  Q
    |||||||    
T  17911662 ttatttt 17911668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 30064157 - 30063962
Alignment:
Q  19 caagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataa 118  Q
    |||||| ||| || ||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||| ||| ||||||||  || ||||||    
T  30064157 caagcttcctattaagtatatttctgacctaaagcccatggtttcttgtggaacattccattgatgtatttcttggtgcttaagtagttgcagactataa 30064058  T
Q  119 ata-agcagctagcaaacatattgaatca--tcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttcatctttatttt 209  Q
    ||| |  |||||||||||||||||||| |  |||| ||||||||||| |||  ||||||||||||||  |||||||||||||||||||||||||||    
T  30064057 atagaatagctagcaaacatattgaattatctcttgtgttcttggaatttaatagtgacaattgttttcctttgaataaaagttcatctttatttt 30063962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 240
Target Start/End: Complemental strand, 679685 - 679481
Alignment:
Q  39 tttctgacctagagcccatgattt-cttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaata-agcagctagcaaac 135  Q
    ||||| ||||| ||||||||  || |||||||||||||||| ||||  |||| || ||||| |||| |||| |||||||||||   ||||||||||| ||    
T  679685 tttctaacctaaagcccatgggttgcttgtggaacattctagtgattaatttcttagggcttaagttagttttaggctataaaaggagcagctagcagac 679586  T
Q  136 atattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttct 235  Q
     | |    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  679585 ttgtaatctcatcttttgttcttgaaaattctaagtgacaattatttctttgaataaaagttcttctttattttcttgttatttacttttatgttcttct 679486  T
Q  236 tcttc 240  Q
    |||||    
T  679485 tcttc 679481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 17206600 - 17206405
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctat 116  Q
    ||||||| |||||| ||| ||||||||||||| | |||| || ||||||||||||||||||| |||| ||||| || ||||| ||||  || ||  ||||    
T  17206600 acaagctacctgtt-agtttatttctgacctaaatgcccgtggtttcttgtggaacattctagtgatatatttcttagggcttaagtcattgtaaactat 17206502  T
Q  117 aaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttctt 212  Q
    ||||| || ||||||||| || |   | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17206501 aaatagagtagctagcaatcacaacaattcatcttttgttcttggaaataataagtgacaattgtctctttgaataaaagttcatctttattttctt 17206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 4460842 - 4460739
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttca 241  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||| || ||||||||||||     
T  4460842 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttattgttattttattttatgttcttcttcttct 4460743  T
Q  242 tctc 245  Q
    ||||    
T  4460742 tctc 4460739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 33609612 - 33609821
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaataa-gcagct 128  Q
    ||||| |||||| |||||| | || |||| |||||| |||||||||||| |||||||||  || ||||| |||| | ||||| |||||||||| | || |    
T  33609612 ttagtttatttcagacctaaaagcacatggtttcttttggaacattctagtgatgtattgcttagggcttaagtcgatatagactataaataaagtagat 33609711  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcata 228  Q
    ||| | ||||   | ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||| ||     
T  33609712 agctatcataacaattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttattttct--ttattttattttatg 33609809  T
Q  229 ttcttcttcttc 240  Q
    ||||||||||||    
T  33609810 ttcttcttcttc 33609821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 782853 - 782773
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  782853 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 782773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 12561949 - 12562029
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12561949 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 12562029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 16076905 - 16076825
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16076905 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 16076825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 5840677 - 5840757
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5840677 tcatattttgttctcggaaataataagtgacaactgtttctttgaataaaagttcacctttactttcttgttatttacttt 5840757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 12567644 - 12567724
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||||  |||| ||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12567644 tcatcttttgttcttttaaataatatgtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 12567724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 3376576 - 3376509
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  3376576 aatcatcttttgttcttggaagtaataagtgacaattgtttctttgaataaaagttcacctttatttt 3376509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 41722715 - 41722770
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41722715 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 41722770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 9264460 - 9264406
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9264460 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 9264406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 35964438 - 35964233
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||| ||  ||||||||||| || ||| ||||||||||||| | |||| || ||| ||||||||||||||| |||||||||  || ||  | ||||    
T  35964438 ttttgctttccggacaagctgcctatt-agtttatttctgacctaaaagcccttggttttttgtggaacattctagtgatgtattgcttaggttttaagt 35964340  T
Q  104 agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatct 202  Q
     | ||||  ||||||||| || ||||||| | || |   | ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||  ||    
T  35964339 cgatatatactataaatagagtagctagccatcacaaatattcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcccct 35964240  T
Q  203 ttatttt 209  Q
    |||||||    
T  35964239 ttatttt 35964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 8787358 - 8787293
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  8787358 tcatcttttgttcttgaaaataataagtgacaattgtttctttgaataaaatttcacctttatttt 8787293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14941806 - 14941741
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  14941806 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 14941741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 15369399 - 15369334
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  15369399 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 15369334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 15707317 - 15707252
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  15707317 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 15707252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 33612346 - 33612281
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  33612346 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 33612281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 48355662 - 48355597
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  48355662 tcatcttttgttctttgaaataataagtgacaattgtttatttgaataaaagttcacctttatttt 48355597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 13434906 - 13434965
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  13434906 ttctttgaataaaagttcatctttattttattgttatttacttttatgttcttcttcttc 13434965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 17946737 - 17946792
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  17946737 tcatcttttgttcttggaaataataagtgtcaattgtttctttgaataaaagttca 17946792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 4465874 - 4465812
Alignment:
Q  136 atattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    ||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||    
T  4465874 atattgaatcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagttc 4465812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 648863 - 648798
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||| | |||||||||    
T  648863 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttaacctttatttt 648798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 9004637 - 9004702
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  9004637 tcatcttttgttctctgaaataataagtgacaattggttctttgaataaaagttcacctttatttt 9004702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 8780485 - 8780430
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  8780485 tcatcttttgttcttggaaataataagttataattgtttctttgaataaaagttca 8780430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 48340670 - 48340615
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  48340670 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttca 48340615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 16097489 - 16097427
Alignment:
Q  147 tcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||  ||||| | |||||||||||||||||||||||||||||||| |||||||||    
T  16097489 tcttttgttctctgaaataagaagtgacaattgtttctttgaataaaagttcacctttatttt 16097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 10204710 - 10204763
Alignment:
Q  187 gaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  10204710 gaataaaagttcatctttattttattgttatttacttttatgttcttcttcttc 10204763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 11483944 - 11483846
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||||| | |  | |||||||||||| |||| || |||||||| ||||||||||||||||||||  ||| || ||||||||||||    
T  11483944 aatcatcttttgttcttggaattcaataatgacaattgttttctttcaacaaaagttcttctttattttcttgttattttattt-atgttcttcttcttc 11483846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 21005596 - 21005537
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  21005596 ttcttggaataaaagttcacctttattttattgttatttacttttatcttcttcttcttc 21005537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 4313253 - 4313317
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||||| | |||||||||||| ||||    
T  4313253 ttcttggaataaaatttcacctttattttattgttatttactttcttcttcttcttcttcttctc 4313317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 4307883 - 4307942
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||||| |||| || ||||||||||||||| | ||||||||||||    
T  4307883 ttcttggaataaaagttcatcattatgttattgttatttactttcttcttcttcttcttc 4307942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 13731837 - 13731880
Alignment:
Q  166 ataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  13731837 ataagtgacaattgtttctttgaataaaagttcaccgttatttt 13731880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 9194055 - 9193998
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttct 238  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| ||  |||||||||    
T  9194055 ttcttggaataaaagttcacctttattttattgttatttacttttatggtcttcttct 9193998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 13434756 - 13434872
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||  ||||||| ||| || ||| ||||||||||||| | |||| || ||| ||||||||||||||| |||||||||  || ||  ||||||    
T  13434756 ttttgcttcccggacaagctacctatt-agtttatttctgacctataagcccttggtttattgtggaacattctagtgatgtattgcttaggtttaaagt 13434854  T
Q  104 agttataggctataaata 121  Q
     ||||||| |||||||||    
T  13434855 cgttatagactataaata 13434872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 1613979 - 1614063
Alignment:
Q  142 aatcatcttttgttcttggaaat-tataagtgacaattgtttctttgaataaaagttc-atctttattttcttgttatttacttt 224  Q
    ||||||||||||||||||||| |  ||||||||||||||| | | | |||||||||||  |||||||||  ||||||||||||||    
T  1613979 aatcatcttttgttcttggaattcaataagtgacaattgtctttcttaataaaagttctttctttatttctttgttatttacttt 1614063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 4317066 - 4316994
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattta 220  Q
    |||||||||||| |||| |||| |  ||||||||| ||||||||||||||||||    |||| ||||||||||||||    
T  4317066 tcatcttttgttattgggaattttctgtgacaattatttctttgaataaaagtt----tttagtttcttgttattta 4316994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 9264569 - 9264503
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||||||||||||| ||||||||| |||| | || |||| || || |||||||| ||||    
T  9264569 tatttctgacctagagcccatggtttcttgtgcaacaatttagtgatttaattcttggggctcaagt 9264503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 6257578 - 6257525
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttc 234  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||| || ||||||    
T  6257578 ttcttggaataaaagttcacctttattttattattatttacttttatgttcttc 6257525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 15522950 - 15523054
Alignment:
Q  21 agctgcctgtttagtctatttctgacctaga-gcccatgattt--cttgtggaacattctattgatgtatttattggggctaaag-tagttataggctat 116  Q
    |||||||| |||||| ||||| ||||||| | |||||||  ||  |||||||||||||| |||||||||||| |||||| | ||| | ||| ||||||||    
T  15522950 agctgcctttttagtttatttttgacctaaaagcccatgggtttccttgtggaacattcaattgatgtatttcttggggtttaagtttgttttaggctat 15523049  T
Q  117 aaata 121  Q
    |||||    
T  15523050 aaata 15523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 15523084 - 15523129
Alignment:
Q  195 gttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||| ||||||||| ||||||||||||||| || ||||||||||||    
T  15523084 gttcttctttatttgcttgttatttacttttatgttcttcttcttc 15523129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 1462587 - 1462647
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttac-tttcatattcttcttcttc 240  Q
    ||||| ||| ||||||||| ||||||||| ||||||||||| ||| || ||||||||||||    
T  1462587 ttcttggaagaaaagttcacctttattttattgttatttactttttatgttcttcttcttc 1462647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 4465930 - 4465886
Alignment:
Q  45 acctagagcccatgatttcttgtggaacattctattgatgtattt 89  Q
    ||||| |||||||| ||||| | ||||||||||||||||||||||    
T  4465930 acctaaagcccatggtttctcgaggaacattctattgatgtattt 4465886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 15173932 - 15173896
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  15173932 aataaaagttcacctttactttcttgttatttacttt 15173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 19515545 - 19515509
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  19515545 tatttctggcctagagcccatgatttcttgtgcaaca 19515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 11870053 - 11869817
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagta 104  Q
    ||||||||| |  |||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||||  ||||||| |||||    
T  11870053 ttttgcttctcggacaagctgcctgtttagtttatttctgacctaaagcccatagtttcttgtggaacattctattgatgtatttcctggggcttaagta 11869954  T
Q  105 gttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctt 203  Q
    ||| ||| ||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  11869953 gttgtagactataaatagagtagctagcaagcatattgaatcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcatctt 11869854  T
Q  204 tattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||  |||  ||||||||||||    
T  11869853 tattttcttgttatttacagtcacgttcttcttcttc 11869817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 8686051 - 8685849
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| ||| |||||| || |||||||||| |||   || |||||||||||||||| ||||||||||||| |||||||| |||||||| ||| |||||    
T  8686051 acaagctacctatttagtttacttctgacctaaagcatgtggtttcttgtggaacattttattgatgtatttcttggggcttaagtagttgtagactata 8685952  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| || |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8685951 aatagagtagctagaaaacatattgaatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcacctttattttattgtta 8685852  T
Q  217 ttt 219  Q
    |||    
T  8685851 ttt 8685849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 8531775 - 8531999
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| ||| ||| || ||||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||    
T  8531775 acaagctacctattttgtttatttatgacctaaagcccatgctttcttgtggaacattctattgatgtatttcttggggcttaagtagttatagactata 8531874  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaa--attataagtgacaattgtttctttgaataaaagttcatctttattttcttgt 214  Q
    |||| || |||||||||||||||| | ||||||||| || || |||  || |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8531875 aatagagtagctagcaaacatattcattcatcttttatttttagaaatataataagtgacatttgtttctttgaataaaagttcatctttattttcttgt 8531974  T
Q  215 tatttactttcatattcttcttcttc 240  Q
    |||||  ||| || ||||||||||||    
T  8531975 tattttattt-atgttcttcttcttc 8531999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 16703677 - 16703872
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    |||||||||||| ||||| ||||| ||||||| |||||||  |||||||||||| ||||||||||||||||| |||||||| |||||||||||| |||||    
T  16703677 acaagctgcctggttagtttatttttgacctaaagcccatagtttcttgtggaaaattctattgatgtatttcttggggcttaagtagttatagactata 16703776  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaatt-ataagtgacaattgttt-ctttgaataaaagttcat-ctttatttt 209  Q
    |||| ||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  16703777 aatagagcagctagcaaacaaattgaatcatctcttgtttttggaaattaataagtgacaattgtttcctttgaataaaagttcatcctttatttt 16703872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 41545970 - 41545776
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagta 104  Q
    ||||||||| |  ||||||||||| |||||| ||||||||||||| ||    || |||||||||||||||| ||||||||||||| |||||||| |||||    
T  41545970 ttttgcttctccgacaagctgcctatttagtttatttctgacctaaagtttgtggtttcttgtggaacattttattgatgtatttcttggggcttaagta 41545871  T
Q  105 gttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    ||| ||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41545870 gttgtagactataaatagagtacctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaaatgtttctttgaataaaagttc 41545776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 17023247 - 17023341
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  17023247 catcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattta-ttttatgttcttcttcttc 17023341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 245
Target Start/End: Complemental strand, 42244740 - 42244526
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| |||| |||||||| | ||||||| ||||||||||||||||||| |||| ||||| || || || ||||  || ||  ||||||||| || ||||    
T  42244740 ttagtttattcctgacctaaaagcccatggtttcttgtggaacattctagtgatatatttcttaggtcttaagtcattgtaaactataaatagagtagct 42244641  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcata 228  Q
    ||||  || |   ||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||  ||| ||     
T  42244640 agcagccacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattttct--ttattttattttatg 42244543  T
Q  229 ttcttcttcttcatctc 245  Q
    |||||||||||| ||||    
T  42244542 ttcttcttcttcttctc 42244526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 13069781 - 13069848
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13069781 aatcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 13069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 11577882 - 11577778
Alignment:
Q  136 atattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttct 235  Q
    ||||||||||||||||||||||||| |||| || ||||||||| |||| ||||||||||| ||| ||||||||| ||||| |||||||| || |||||||    
T  11577882 atattgaatcatcttttgttcttgggaattctaggtgacaattatttcattgaataaaagatcacctttattttattgttgtttacttttatgttcttct 11577783  T
Q  236 tcttc 240  Q
    |||||    
T  11577782 tcttc 11577778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 43842144 - 43842064
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  43842144 tcattttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 43842064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 11398788 - 11398968
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaataa-gcagct 128  Q
    ||||| ||||||||||||| | |||| || ||||||||||||||||||| | |||||||  || ||  | |||| | ||||| |||||||||| | ||||    
T  11398788 ttagtttatttctgacctaaaagcccttggtttcttgtggaacattctagtaatgtattgtttaggttttaagtcggtatagactataaataaagtagct 11398887  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||| | || |   | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||    
T  11398888 agctatcacaacaattcatcttttgttcttggaaataataagggacaaatgtttctttgaataaaagttcacctttatttt 11398968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 19656180 - 19656101
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  19656180 tcatcttttgttctcggaaataataagtgacaattgtt-ctttgaataaaagttcacctttactttcttgtcatttacttt 19656101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 6236871 - 6236938
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  6236871 aatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 6236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14494893 - 14494828
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  14494893 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 14494828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14976377 - 14976312
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  14976377 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 14976312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 2721944 - 2722012
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc-atctttattttct 211  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  2721944 tcatcttttattcttggaaataataagtgacaattgtttctttgaataaaagttcaacctttattttct 2722012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 25765884 - 25765825
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  25765884 ttcttggaataaaagttcatctttattttattgttatttacttttatgttcttcttcttc 25765825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 34053680 - 34053625
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34053680 tcatcttctgttcttggaaataataagtgacaattgtttctttgaatcaaagttca 34053625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14660860 - 14660795
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||| || | |||||||||    
T  14660860 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaattttacctttatttt 14660795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 36076224 - 36076277
Alignment:
Q  187 gaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  36076224 gaataaaagttcacctttattttattgttatttacttttatgttcttcttcttc 36076277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 7908418 - 7908629
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | | || || ||||||||||||||||||| || | ||||| || ||||| ||||  || ||  ||||||||| || ||||    
T  7908418 ttagtttatttctgacctaaaagtccgtggtttcttgtggaacattctagtgttatatttcttagggcttaagtcattgtaaactataaatagagtagct 7908517  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgttatttactttcat 227  Q
    ||| | ||||   ||||||||||||||||||||| | |  |||||||||||| | | | ||||||||||  || |||| |||||||||||||  ||| ||    
T  7908518 agctatcataacaaatcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagtttttcatttactttcttgttattttattt-at 7908616  T
Q  228 attcttcttcttc 240  Q
     ||||||||||||    
T  7908617 gttcttcttcttc 7908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 17041605 - 17041796
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    ||||||||||| |||||||| ||| || ||| ||||||||||||| | |||| || ||||||||||||||||||| |  | ||||| || ||||| ||||    
T  17041605 ttttgcttcccgaacaagctacctatt-agtttatttctgacctaaaagcccgtggtttcttgtggaacattctactcttatatttcttagggcttaagt 17041703  T
Q  104 agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaag 195  Q
      || ||  ||||||||| || ||||||| | ||     | ||||||||||||||| ||||| |||||||||||||||||  || ||||||||    
T  17041704 cattgtaaactataaatagagtagctagctatcactacaattcatcttttgttcttcgaaataataagtgacaattgttttctttaataaaag 17041796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 14659198 - 14659269
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    ||||||| ||| |||||| ||||||||||||| | |||| || ||||||||||||||||||| |||||||||    
T  14659198 acaagctacctatttagtttatttctgacctaaaagcccgtggtttcttgtggaacattctagtgatgtatt 14659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 25054940 - 25055067
Alignment:
Q  37 tatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaa 134  Q
    ||||||||||||||| |||| || ||||||||||||||||||| |||||||||  || ||  | |||| ||||||| ||||||||| || || |||| |     
T  25054940 tatttctgacctagaagcccttggtttcttgtggaacattctagtgatgtattgtttaggttttaagtcgttatagactataaatagagtagttagctat 25055039  T
Q  135 catattgaatcatcttttgttcttggaa 162  Q
    ||||   | |||||||||||||||||||    
T  25055040 cataacaattcatcttttgttcttggaa 25055067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 25055059 - 25055118
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| |  ||||||||||||    
T  25055059 ttcttggaataaaagttcacctttattttattgttatttacttttacgttcttcttcttc 25055118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 27992732 - 27992694
Alignment:
Q  202 tttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  27992732 tttattttcttgttatttactttcatgttcttcttcttc 27992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 13605073 - 13605114
Alignment:
Q  168 aagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  13605073 aagtgacaattgtttctttgaataaaatttcacctttatttt 13605114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 22038888 - 22038952
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| ||||||||||||| ||||||||| | ||||||| |||| || |||||||||||| ||||    
T  22038888 ttcttggaataaaagttcacctttattttatcgttatttgcttttatgttcttcttcttcttctc 22038952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 17050755 - 17050806
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaag 195  Q
    ||||||||||||||||||||| ||||||| |||||||||  || ||||||||    
T  17050755 tcatcttttgttcttggaaataataagtggcaattgttttctttaataaaag 17050806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 20225306 - 20225211
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||||||| | |  |||||||||||| | | | ||||||||||| || |||| |||||||||||||  ||| || ||||||||||||    
T  20225306 catcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttcttcttttactttcttgttattttattt-atgttcttcttcttc 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 20225445 - 20225409
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  20225445 tatttctgacctagagcccatggtttcttgtgcaaca 20225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 43496252 - 43496288
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  43496252 aataaaagttcacctttactttcttgttatttacttt 43496288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 1286 - 1502
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||||  || ||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||| ||||| |   |||| ||||||||||||| ||||    
T  1286 acaagctgtttggttagtttatttttgacctaaagcccacaatttcttgtggaacattctattgatatatttctcaaggcttaagtagttataggttata 1385  T
Q  118 aataa-gcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  1386 aataaagcagctagcaaatatattgaatcatcttttgttcttggaaataataagtgacaactgtttctttgaataaaagttcatctctattttcttgtta 1485  T
Q  217 tttactttcatattctt 233  Q
    ||||||||||| |||||    
T  1486 tttactttcatgttctt 1502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 24166129 - 24166366
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt- 103  Q
    ||||||||||  | |||||||||| |||||| ||||| |||| || |||| | | ||||||||| |||||||||||||||||||| |||||||| ||||     
T  24166129 ttttgcttcctgatcaagctgcctttttagtttatttttgacataaagcctacggtttcttgtgcaacattctattgatgtatttcttggggcttaagtt 24166228  T
Q  104 agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatct 202  Q
    |||| || |||||||||| ||||||||| ||||||||    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24166229 agttttatgctataaatagagcagctaggaaacatatattttcatcttttgttcttggaaatgataagtgacaattgtttctttgaataaaagttcatct 24166328  T
Q  203 ttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  24166329 ttatttgcttgttatttactttcatgttcttcttcttc 24166366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 23029742 - 23029560
Alignment:
Q  60 tttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttct 157  Q
    |||||||||||||||||||||||||||||| |||||||| | || |||| ||||||||||||| ||||||||||| ||||||  | ||||||||||||||    
T  23029742 tttcttgtggaacattctattgatgtatttcttggggcttatgttagttttaggctataaatagagcagctagcagacatatctattcatcttttgttct 23029643  T
Q  158 tggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||    
T  23029642 tggaaattataagtgaagattgtttctttgaataaaagttcttctttattttcttgttatttacttctatgttcttcttcttc 23029560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 22170669 - 22170857
Alignment:
Q  18 acaagctgcctgtttagt-ctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctat 116  Q
    |||||||||||||||| | |||||||||||||| |||||||  ||||||||| ||||||||||| |||||||| ||| |||| |||||||| ||| ||||    
T  22170669 acaagctgcctgtttaattctatttctgacctaaagcccatagtttcttgtgaaacattctattaatgtatttcttgaggcttaagtagttgtagactat 22170768  T
Q  117 aaat-aagcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatcttt 204  Q
    |||| ||||||||||||| |||||| | |||||||||||| |  |||||||  |||||||||||||||||||||||||||||| |||||    
T  22170769 aaataaagcagctagcaatcatattcattcatcttttgttatctgaaattaatagtgacaattgtttctttgaataaaagttcttcttt 22170857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 24214757 - 24214835
Alignment:
Q  146 atcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  24214757 atcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 24214835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 24220380 - 24220458
Alignment:
Q  146 atcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  24220380 atcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 24220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 22942370 - 22942435
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  22942370 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaatttcacctttatttt 22942435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 16676976 - 16677152
Alignment:
Q  30 tttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaata-agcagc 127  Q
    |||||| ||||||||||||| |||||||||||||||||| |||| |  | |||| ||||| || ||||| |||| | |  ||||||||||||| ||||||    
T  16676976 tttagtttatttctgacctaaagcccatgatttcttgtgcaacacttcagtgatttatttcttagggcttaagtcaatgttaggctataaatagagcagc 16677075  T
Q  128 tagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatcttt 204  Q
     | ||| | | |  ||||||||||| ||||  |||||||  |||||||||||||||||||||||||||||| |||||    
T  16677076 catcaagcttgtataatcatcttttcttctctgaaattaatagtgacaattgtttctttgaataaaagttcttcttt 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 12410424 - 12410591
Alignment:
Q  31 ttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagcta 129  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||| |||| ||||| || ||||| ||||  || ||  ||||||||| || |||||    
T  12410424 ttagtttatttctgacctaaagcccatggtttcttgtggaacattctagtgatttatttcttagggcttaagtcattgtaaactataaatagagtagcta 12410523  T
Q  130 gcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagtt 197  Q
    |||| ||||   | ||||||||||||||||||| | |  | ||||||||||||  || ||||||||||    
T  12410524 gcaatcataacaattcatcttttgttcttggaattcaataatgacaattgttttctttaataaaagtt 12410591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 15059387 - 15059452
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  15059387 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 15059452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 20916027 - 20915972
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20916027 tcatcttttgttcttggaaataataagtgacaattatttctttgaataaaagttca 20915972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 24165262 - 24165328
Alignment:
Q  143 atcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  24165262 atcatcttttgttctcttaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 24165328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 20169536 - 20169471
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||| || |||||||||    
T  20169536 tcatcttttgttattggaaagaataagtgacaattgtttctttgaataaaagtccacctttatttt 20169471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 20967761 - 20967826
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  20967761 tcatcttttgttctctgaaataataagtgacaattttttctttgaataaaagttcaactttatttt 20967826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 23343620 - 23343555
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  23343620 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacttttatttt 23343555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 31057780 - 31057716
Alignment:
Q  160 gaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||    
T  31057780 gaaataataagtgacaattttttctttgaataaaagttcacctttactttcttattatttacttt 31057716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 23114276 - 23114367
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||  |||| || ||||||||||||||  | ||||||||||| ||     ||||||||||||||||||||| ||||||||||||    
T  23114276 tcatcttttgttcttgagaattttatgtgacaattgtttccattaataaaagttcttc-----tttcttgttatttactttcatgttcttcttcttc 23114367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 31758199 - 31758097
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaa-gttcat-ctttattttcttgttatttactttcatattcttcttcttca 241  Q
    ||||||||||||||||||| | |  |||||||||||| | | | ||||||| |||| | |||||||||||||||||||||||| || ||||||||||||     
T  31758199 tcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaaagttctttctttattttcttgttatttacttt-atgttcttcttcttct 31758101  T
Q  242 tctc 245  Q
    ||||    
T  31758100 tctc 31758097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 2953721 - 2953655
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||||||||||||  ||||||||| |||| | || |||| || ||||||||||| ||||    
T  2953721 tatttctgacctagagcccatcgtttcttgtgcaacactttaatgatttaattattggggctcaagt 2953655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 20738361 - 20738439
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcat-ctttattttcttgttattt 219  Q
    ||||||||||||||||||||| | |  |||| ||||||| | | | ||||||||||| | |||||||||||||||||||    
T  20738361 aatcatcttttgttcttggaattcaatagtggcaattgtctttcttaataaaagttcttcctttattttcttgttattt 20738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 34223296 - 34223259
Alignment:
Q  51 agcccatgatttcttgtggaacattctattgatgtatt 88  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  34223296 agcccatggtttcttgtggaacattctagtgatgtatt 34223259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 9487247 - 9487024
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||||||| |||||||||||||| ||||| ||||| |  |||||||||||||| ||||||||||||||| |||||||| |||||||| ||| |||||    
T  9487247 acaagctgcctatttagtctatttctaacctaaagcccgtagtttcttgtggaacactctattgatgtatttcttggggcttaagtagttgtagactata 9487148  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| ||||| ||||||||||||| | ||||||||||||||||  |||| |||||||||||| |||||||||| ||||  ||| ||||||||| ||||||    
T  9487147 aatagagcaggtagcaaacatattcattcatcttttgttcttgagaattctaagtgacaattatttctttgaaaaaaatatcacctttattttattgtta 9487048  T
Q  217 tttactttcatattcttcttcttc 240  Q
    ||||||||| | ||||||||||||    
T  9487047 tttactttcttcttcttcttcttc 9487024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 5513845 - 5513663
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    |||||||| ||||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||| || |||||||| |||||||| ||| |||||    
T  5513845 acaagctgtctgtttagtttatttctgacctaaagcccatggtttcttatggaacattctattgatgtaattcttggggcttaagtagttttagactata 5513746  T
Q  118 aat-aagcagctagcaaacatattgaatcatcttttgttcttggaaatt-ataagtgacaattgtttctttgaataaaagttc 198  Q
    ||| |||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5513745 aataaagcagctagaaaacatattcaatcatcttttgttcttgtaaattaataagtgacaattgtttctttgaataaaagttc 5513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 33331203 - 33330981
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||||||| |||||| ||||| ||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||| |||||||| ||  |||||    
T  33331203 acaagctgcctatttagtttatttatgacctaaagcccatagtttcttgtggaacattctactgatgtatttcttggggcttaagtagttgtaaactata 33331104  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgtta 216  Q
    |||| || |||||||||||||||  |||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| || || || | |  |||    
T  33331103 aatagagtagctagcaaacatatcaaatcatctattgttctctgaaattataagtgacaattatttctttgaataaaagttc-tcctttttatttattta 33331005  T
Q  217 tttactttcatattcttcttcttc 240  Q
    ||| ||||||| ||||||||||||    
T  33331004 ttttctttcatgttcttcttcttc 33330981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 204
Target Start/End: Complemental strand, 23793768 - 23793614
Alignment:
Q  51 agcccatgatttcttgtggaacattctattgatgtatttattggggctaaag-tagttataggctataaata-agcagctagcaaacatattgaatcatc 148  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||| |||||||| |||||||||    |||||    
T  23793768 agcccatggtttcttgtggaacattctattgatgtatttcttggggcttaagttagttttaggctataaatagagcagctaacaaacatatattctcatc 23793669  T
Q  149 ttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatcttt 204  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23793668 ttttgttcttggaaattataagtg-caattgtttctttgaataaaagttcatcttt 23793614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 198
Target Start/End: Original strand, 5675373 - 5675521
Alignment:
Q  51 agcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatct 149  Q
    |||||||  |||||||||||||||||||||||||||||| |||||| | |||||||| ||| ||||||||| || |||||||||||||||||||||||||    
T  5675373 agcccatagtttcttgtggaacattctattgatgtatttcttggggtttaagtagttgtagactataaatagagaagctagcaaacatattgaatcatct 5675472  T
Q  150 tttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    ||||||||  ||||||||||||||||| |||||||||||||||| ||||    
T  5675473 tttgttctctgaaattataagtgacaactgtttctttgaataaatgttc 5675521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 38652154 - 38652251
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| || ||||||||||||    
T  38652154 aatcatcttttgttattggaaataataagtgacaattgtttctttgaataaaagttcatccttatttccttgttattta-ttttatgttcttcttcttc 38652251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 11922642 - 11922431
Alignment:
Q  30 tttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttat-aggctataaata-agcagc 127  Q
    |||||| ||||||||||||| ||||| || ||||||||| |||| | || |||| ||||| || ||||| ||||  || | |||||||||||| || |||    
T  11922642 tttagtttatttctgacctaaagcccttggtttcttgtgcaacactttagtgatctatttcttagggcttaagtcattgttaggctataaatagagtagc 11922543  T
Q  128 tagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcat 227  Q
     | ||||| | |  | | || |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||| ||    
T  11922542 catcaaacttgtatattaatattttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttattttcttgttattttattt-at 11922444  T
Q  228 attcttcttcttc 240  Q
     ||||||||||||    
T  11922443 gttcttcttcttc 11922431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 17168863 - 17168949
Alignment:
Q  154 ttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  17168863 ttcttggaaattctaagtgacaattatttctttgaataaaagttcttctctattttcttgttatttacttttatgttcttcttcttc 17168949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 17174435 - 17174521
Alignment:
Q  154 ttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  17174435 ttcttggaaattctaagtgacaattatttctttgaataaaagttcttctctattttcttgttatttacttttatgttcttcttcttc 17174521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 31593797 - 31593971
Alignment:
Q  37 tatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaa 134  Q
    ||||||||||||| | |||| || ||||||||||||||||||| |||||||||  || ||  | |||| ||||||| ||||||||| || | ||||| |     
T  31593797 tatttctgacctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatagactataaatagagtaactagctat 31593896  T
Q  135 catattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||   | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  31593897 cataacaattcatcttttgttctttgaaataataagtgacaattgtttctttgaataaaagttcacttttatttt 31593971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 6518379 - 6518459
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6518379 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 6518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 21102308 - 21102228
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||   |||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  21102308 tcatcttttgttctcttaaataataagtgacaattatttctttgaataaaagttcacctttactttcttgttatttacttt 21102228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 24125297 - 24125233
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24125297 catcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 24125233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 11889048 - 11888993
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11889048 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 11888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 20059235 - 20059168
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  20059235 aatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 20059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 11902738 - 11902628
Alignment:
Q  100 aagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||| ||||||| ||||||||| || ||||||| | ||||   | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  11902738 aagtcgttatagactataaatagagtagctagctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttaaataaaagttc 11902639  T
Q  199 atctttatttt 209  Q
    |  ||||||||    
T  11902638 acatttatttt 11902628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 3355270 - 3355335
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||   |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  3355270 tcatcttttgttctataaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 3355335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 12346156 - 12345960
Alignment:
Q  18 acaagctgcctgttta-gtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttata-ggcta 115  Q
    |||||||| ||||||| || ||||||||||||| |||||||| ||||||||| |||| | || | || ||||| || ||||| || |   |||  |||||    
T  12346156 acaagctgtctgtttaagtttatttctgacctaaagcccatggtttcttgtgtaacactgtagtaatttatttcttagggcttaaatcaatatttggcta 12346057  T
Q  116 taaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttcatctttatttt 209  Q
    |||||| |||||| | ||||| |||    |||||| |||||||||||| |||  ||||||||||||||  |||||||||||||||||||||||||||    
T  12346056 taaatagagcagccatcaaacttatattttcatctcttgttcttggaatttaatagtgacaattgttttcctttgaataaaagttcatctttatttt 12345960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 16951909 - 16951974
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  16951909 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataacagttcacctttatttt 16951974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 21275245 - 21275310
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||| |||||||||    
T  21275245 tcatcttttgttctctgaaataataagggacaattgtttctttgaataaaagttcacctttatttt 21275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 43701643 - 43701578
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  43701643 tcatcttttgttatctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 43701578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 18287005 - 18287070
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||  ||||||||    
T  18287005 tcatcttttgttctctgaaataataagtgacaattctttctttgaataaaagttcacttttatttt 18287070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 3772249 - 3772202
Alignment:
Q  152 tgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  3772249 tgttcttggaaataataagtgacaattgcttctttgaataaaagttca 3772202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 13622331 - 13622390
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  13622331 ttcttggaataaaagttcacctttattttattgttatttacttttatgttcttcttcttc 13622390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 10731038 - 10731109
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    ||||||| ||| || ||| || |||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  10731038 acaagctacctattaagtttacttctgacctaaaagcccatgatttcttgtggaacattctaatgatgtatt 10731109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 10944807 - 10944878
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    ||||||| ||| || ||| || |||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  10944807 acaagctacctattaagtttacttctgacctaaaagcccatgatttcttgtggaacattctaatgatgtatt 10944878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 13622215 - 13622273
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    ||||| ||||||||||||| | |||| |||||||||||||||||||||| |||||||||    
T  13622215 ttagtttatttctgacctaaaagcccttgatttcttgtggaacattctagtgatgtatt 13622273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 10731176 - 10731219
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  10731176 ttcttggaataaaagttcacctttattttattgttatttacttt 10731219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 10944945 - 10944988
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  10944945 ttcttggaataaaagttcacctttattttattgttatttacttt 10944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 12347446 - 12347483
Alignment:
Q  208 ttcttgttatttactttcatattcttcttcttcatctc 245  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  12347446 ttcttgttatttactttcatgttcttcttcttaatctc 12347483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 3391995 - 3392031
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  3391995 aataaaagttcacctttactttcttgttatttacttt 3392031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 18080991 - 18080955
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  18080991 aataaaagttcacctttactttcttgttatttacttt 18080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 20860953 - 20860759
Alignment:
Q  18 acaagctgcctgttta-gtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctat 116  Q
    |||||||| ||||||| || ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||    
T  20860953 acaagctgtctgtttaagtttatttctgacctaaagcccatggtttcttgtggaacattccattgatgtatttcttggggcttaagtagttgtagactat 20860854  T
Q  117 aaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatctttatttt 209  Q
    ||||| ||||||||||||||||||  |||||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  20860853 aaatagagcagctagcaaacatatacaatcatctcttgttcttggaaattaatagtgacaattgtttcctttgaataaaagttcatctttatttt 20860759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 198
Target Start/End: Original strand, 23298787 - 23298956
Alignment:
Q  30 tttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    |||||| ||||||||||||| |||||||| ||| |||||||||||| ||||||||||||| |||||||| |||| ||  ||| ||||||||| || ||||    
T  23298787 tttagtttatttctgacctaaagcccatggttttttgtggaacattttattgatgtatttcttggggcttaagttgtcgtagactataaatagagtagct 23298886  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||||||||||||||||||||||||||| |||||||  || || |||| |||||||||||||||||||    
T  23298887 agcaaacatattgaatcatcttttgttctttgaaattaatagcgagaattatttctttgaataaaagttc 23298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 20899599 - 20899426
Alignment:
Q  17 aacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctat 116  Q
    |||||||||||| |||||| ||||||| ||||| |||| ||| |||| ||| |||||||||||| |||||||| |||||||| |||||||| ||| ||||    
T  20899599 aacaagctgcctatttagtttatttctaacctaaagcc-atggtttcctgtagaacattctatttatgtatttcttggggcttaagtagttgtagactat 20899501  T
Q  117 aaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaat 190  Q
    ||||| |  |||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  20899500 aaatagaatagctagaaaacatattcattcatcttttgttcttggaaataataagtgacaattgtttctttgaat 20899426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 195
Target Start/End: Original strand, 26194180 - 26194308
Alignment:
Q  69 gaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattat 167  Q
    |||||||||||| |||||||| || || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||     
T  26194180 gaacattctattaatgtatttcttcggacttaagtagttatagactataaatagagcaactagcaaacatattgaatcatcttttgttcttggaaattaa 26194279  T
Q  168 aagtgacaattgtt-tctttgaataaaag 195  Q
     ||||||||||||| ||||||||||||||    
T  26194280 tagtgacaattgttatctttgaataaaag 26194308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 25405159 - 25405064
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  ||| || ||||||||||||    
T  25405159 tcatcttttgttcttggaaataataagtgacaattgtttcttttaataaaagttcttctttattttcttgttattttattt-atgttcttcttcttc 25405064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 13799643 - 13799464
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| |||| |||||||| | ||||||| ||||||||||||||||||| |||| ||||| || || || ||||  || ||  ||||||||| || ||||    
T  13799643 ttagtttattcctgacctaaaagcccatggtttcttgtggaacattctagtgatatatttcttaggtcttaagtcattgtaaactataaatagagtagct 13799544  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattt 208  Q
    |||| ||| |   ||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  13799543 agcagacacaacaaatcatcttttgttctctgaaataataagtgacaattgtttatttgaataaaagttcatctttattt 13799464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 2386234 - 2386314
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  2386234 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagtttacctttactttcttgttatttacttt 2386314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 21792426 - 21792346
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  21792426 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 21792346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 21784300 - 21784220
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||   |||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  21784300 tcatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 21784220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 30819122 - 30819061
Alignment:
Q  151 ttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttctt 212  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  30819122 ttgttcttggaaataataagtgacaattgtttctttgaataaaagttcatctttactttctt 30819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 17716649 - 17716829
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | |||| ||  |||||||||| ||||||| |||||||||  || ||  | |||| ||||||| ||||||||| || ||||    
T  17716649 ttagtttatttctgacctaaaagcccttggcttcttgtggaccattctagtgatgtattgcttaggttttaagttgttatagactataaatagagtagct 17716748  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||| | ||||   | | ||||||||||||   |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  17716749 agctatcataacaatttatcttttgttctctaaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 17716829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 28206439 - 28206359
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||    
T  28206439 tcatcttttgttctcagaaataataagtgacaattgtttctttgaataaaaattcacctttactttcttgtcatttacttt 28206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 16385157 - 16384974
Alignment:
Q  18 acaagctgcctgttt-agtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggcta 115  Q
    ||||||| ||||||| ||| ||||||||||||| ||||||   ||||||||| |||| |||| |||| |||||  | ||||| |||| | |  ||| |||    
T  16385157 acaagcttcctgtttgagtttatttctgacctaaagcccacagtttcttgtgtaacactctagtgatttatttcgtagggcttaagtcaatgttagacta 16385058  T
Q  116 taaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||| |||||| | ||| | | |  |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16385057 taaatagagcagccatcaaccttgtataatcgtcttttgttctttgaaattataagtgacaattgtttctttgaataaaagttc 16384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 48256209 - 48256378
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | |||| || |||||| |||||||||||| |||||||||  || ||  | |||| ||||||| ||||||||| || ||||    
T  48256209 ttagtttatttctgacctaaaagcccttggtttcttatggaacattctagtgatgtattacttaggttttaagtcgttatagactataaatagagtagct 48256308  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||| |  |||   | ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  48256309 agctattataacaattcatcttttgttcttggaa-taataagtaacaattgtttctttgaataaaagttca 48256378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 17986584 - 17986637
Alignment:
Q  146 atcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17986584 atcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 17986637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 41802283 - 41802348
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  41802283 tcatcttttgttctatgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 41802348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 8648876 - 8648930
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  8648876 catcttttgttcttgaaaataataagtgacaattgtttctttgaataaaagttca 8648930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 39286696 - 39286642
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  39286696 catcttttgttcttggaaaaaataagtgacaattgtttctttgaataaaagttca 39286642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 26134601 - 26134537
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  26134601 tcatcttttgttctctgaaataataagtgacaattgttt-tttgaataaaagttcacctttatttt 26134537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 28207904 - 28207969
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||| ||| |||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  28207904 tcatcttttgtttttgcaaataataagtgaccattgtttatttgaataaaagttcacctttatttt 28207969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44538253 - 44538318
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||   ||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  44538253 tcatcttttgttctcaaaaatattaagtgacaattgtttctttgaataaaagttcacctttatttt 44538318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 16431590 - 16431654
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| | |||||||||||| ||||    
T  16431590 ttcttggaataaaagttcacctttattttattgttatttactttcttcttcttcttcttcttctc 16431654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 15346935 - 15346876
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatcttt 204  Q
    |||||||||||||||| ||||||| ||||||||||||||  | ||||||||||| |||||    
T  15346935 catcttttgttcttgggaattatatgtgacaattgtttccataaataaaagttcttcttt 15346876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 20412277 - 20412328
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaag 195  Q
    ||||||||||||||||||||| |||||||||||||||||  || ||||||||    
T  20412277 tcatcttttgttcttggaaataataagtgacaattgttttctttaataaaag 20412328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 26192140 - 26192209
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacat 74  Q
    ||||||||| |  ||||||| |||||||||| ||||||||||||| || ||||| |||||||| ||||||    
T  26192140 ttttgcttctcggacaagcttcctgtttagtttatttctgacctaaagtccatggtttcttgtagaacat 26192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 30819254 - 30819193
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggct 98  Q
    |||||||||||||||||||||| ||||||||| |||||| || |||| || || ||||||||    
T  30819254 tatttctgacctagagcccatggtttcttgtgcaacattttagtgatttaattcttggggct 30819193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 20493488 - 20493543
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||| ||||||| ||||||||||||||||||| || |||| ||||||||||||||    
T  20493488 aatcatattttgtttttggaaattataagtgacactt-tttcattgaataaaagttc 20493543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 52235916 - 52235873
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||    
T  52235916 ttcttggaataaaagtacatctttattttattgttatttacttt 52235873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 24680119 - 24680177
Alignment:
Q  140 tgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||||||||||||||||||  ||| || ||||||| | |||||||||| ||||||||    
T  24680119 tgaatcatcttttgttcttggggattttatgtgacaactatttctttgaacaaaagttc 24680177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16431440 - 16431523
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccat-gatttcttgtggaacattctattgatgtatt 88  Q
    |||||||| ||| ||||||| ||| || ||| ||||||||||||| |  |||| | ||||||||||||||||||| |||||||||    
T  16431440 ttttgctttccagacaagctacctatt-agtttatttctgacctaaaagccattggtttcttgtggaacattctagtgatgtatt 16431523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 30 - 245
Target Start/End: Original strand, 168089 - 168305
Alignment:
Q  30 tttagtctatttctgacctaga-gcccatga-tttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaataagcag 126  Q
    |||||| ||||||||||||| | |||||||| |||||||||||||||||||||||||||||| || ||||| |||| |||| |||||||||||  |||||    
T  168089 tttagtttatttctgacctaaaagcccatgagtttcttgtggaacattctattgatgtatttctttgggcttaagttagttttaggctataaaagagcag 168188  T
Q  127 ctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttca 226  Q
    |||||| ||||||  |||||||||||||||||||||||| |||||||||||| ||||||| ||||||  ||| ||||||||||||||||||||||||| |    
T  168189 ctagcagacatatctaatcatcttttgttcttggaaattctaagtgacaattatttctttaaataaa--ttcttctttattttcttgttatttactttta 168286  T
Q  227 tattcttcttcttcatctc 245  Q
    | |||||||||||| ||||    
T  168287 tgttcttcttcttcttctc 168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 3352 - 3573
Alignment:
Q  21 agctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataa 118  Q
    |||||||| || ||| || |||||||||| | || |||| |||||||||||||||||||||||||||||| || ||||| |||| |||| ||||||||||    
T  3352 agctgccttttaagtgtaattctgacctaaaagctcatggtttcttgtggaacattctattgatgtatttcttagggcttaagttagttttaggctataa 3451  T
Q  119 ata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttat 217  Q
    ||| ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3452 atagagcagctagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttattgttat 3550  T
Q  218 ttactttcatattcttcttcttc 240  Q
    ||||||| || ||||| ||||||    
T  3551 ttacttttatgttcttattcttc 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 3517 - 3738
Alignment:
Q  21 agctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataa 118  Q
    |||||||| || ||| || |||||||||| | || |||| |||||||||||||||||||||||||||||| || ||||| |||| |||| ||||||||||    
T  3517 agctgccttttaagtgtaattctgacctaaaagctcatggtttcttgtggaacattctattgatgtatttcttagggcttaagttagttttaggctataa 3616  T
Q  119 ata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttat 217  Q
    ||| ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3617 atagagcagctagcaaacatatattttcatcttttgttcttggaaattataagtgacaattgtttcttagaataaaagttc-tctttattttattgttat 3715  T
Q  218 ttactttcatattcttcttcttc 240  Q
    ||||||| || ||||| ||||||    
T  3716 ttacttttatgttcttattcttc 3738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 29682479 - 29682699
Alignment:
Q  24 tgcctgtttagtctatttctgacctaga-gcccatga-tttcttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaat 120  Q
    ||||| |||||| ||||||||||||| | |||||||  |||||||||||||||||||||||| ||||| |||||||| |||| |||| |  |||||||||    
T  29682479 tgcctttttagtttatttctgacctaaaagcccatgggtttcttgtggaacattctattgatatatttcttggggcttaagttagtttttagctataaat 29682578  T
Q  121 a-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttattt 219  Q
    | || |||||||| ||||||    ||||||||| |||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||||| |||||    
T  29682579 agagaagctagcagacatatattttcatcttttattcttggaaattctaagtgacaattatttctttggataaaagttcttctttattttcttgctattt 29682678  T
Q  220 actttcatattcttcttcttc 240  Q
    ||||| || ||||||||||||    
T  29682679 acttttatgttcttcttcttc 29682699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 31965708 - 31965575
Alignment:
Q  64 ttgtggaacattctattgatgtatttattggggctaaagt-agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttgga 161  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||||||    ||||||||||||||||||    
T  31965708 ttgtggaacattctattgatgtatttcttggggcttaagttagttttaggctataaatagagcagctagcaaacatatattgtcatcttttgttcttgga 31965609  T
Q  162 aattataagtgacaattgtttctttgaataaaag 195  Q
    ||||||||||||||||||||||||||||||||||    
T  31965608 aattataagtgacaattgtttctttgaataaaag 31965575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 20222860 - 20223011
Alignment:
Q  91 ttggggctaaagt-agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttga 188  Q
    |||||||| |||| |||| ||||||||||||| |||| |||| ||||||||    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20222860 ttggggcttaagttagttttaggctataaatagagcaactagaaaacatatattctcatcttttgttcttggaaataataagtgacaattgtttctttga 20222959  T
Q  189 ataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  20222960 ataaaagttcatctttattttcttgttatttacttttatgttcttcgtcttc 20223011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 22116844 - 22116995
Alignment:
Q  91 ttggggctaaagt-agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttga 188  Q
    |||||||| |||| |||| ||||||||||||| |||| |||| ||||||||    ||||||||||||||||||||| |||||||||||||||||||||||    
T  22116844 ttggggcttaagttagttttaggctataaatagagcaactagaaaacatatattctcatcttttgttcttggaaataataagtgacaattgtttctttga 22116943  T
Q  189 ataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  22116944 ataaaagttcatctttattttcttgttatttacttttatgttcttcgtcttc 22116995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 23348369 - 23348176
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagta 104  Q
    ||||||||| |  ||||| | ||| |||||| ||||| ||||||| |||||||| |||| ||||||||||| ||||||||||||| |||||||| |||||    
T  23348369 ttttgcttctcgtacaagttacctatttagtttatttatgacctaaagcccatggtttcatgtggaacattatattgatgtatttcttggggcttaagta 23348270  T
Q  105 gttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagtt 197  Q
    ||| ||| ||||||||| || ||||||||| || ||| | ||||||||||||||  |||||||  |||||||||||||||||||||||||||||    
T  23348269 gttgtagactataaatagagtagctagcaatcacatttattcatcttttgttctctgaaattaatagtgacaattgtttctttgaataaaagtt 23348176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 15172125 - 15172318
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| | |||||||| ||||||| ||||| |||| | | ||||| |||||||||||||||||||||||| || ||||| |||||||| ||| |||||    
T  15172125 acaagcttcttgtttagtttatttctaacctaaagccgacggtttctcgtggaacattctattgatgtatttctt-gggcttaagtagttgtagactata 15172223  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttcatctttatttt 209  Q
    |||| || |||||||||||||||||| |||||| ||| |||||||| |||  | |||||| |||||  |||||||||||||||||||||||||||    
T  15172224 aatagagtagctagcaaacatattgattcatctcttggtcttggaatttaataatgacaactgttttcctttgaataaaagttcatctttatttt 15172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 18973551 - 18973738
Alignment:
Q  20 aagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaa 119  Q
    ||||||||| |||||| || ||||| |||| ||||  || |||||||||||| |||||||| |||||||| |||||| |  ||||||| ||  |||||||    
T  18973551 aagctgcctatttagtttacttctgtcctaaagcctgtggtttcttgtggaatattctattaatgtatttcttggggttttagtagttgtaaactataaa 18973650  T
Q  120 ta-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttc-tttgaataaaagttcatcttta 205  Q
    || || |||||||||||||||| ||| |||| |||||||||||||||   ||||||||||||||| ||||||||||||||||||||||    
T  18973651 tagagtagctagcaaacatattcaattatctcttgttcttggaaatttatagtgacaattgtttcttttgaataaaagttcatcttta 18973738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 24393079 - 24392888
Alignment:
Q  20 aagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaa 119  Q
    |||||||||  ||||| || |||||||||| |||   || |||||||||||| ||||||||||||||||| ||||||||  ||||||| ||  |||||||    
T  24393079 aagctgcctacttagtttacttctgacctaaagcatgtggtttcttgtggaatattctattgatgtatttcttggggctttagtagttgtaaactataaa 24392980  T
Q  120 ta-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatctttatttt 209  Q
    || || ||||| |||| ||||| |||||||| |||||||||||||||   ||||| |||||||| |||||||||||||||||||||||||||    
T  24392979 tagagtagctaccaaaaatattcaatcatctcttgttcttggaaatttatagtgataattgtttcctttgaataaaagttcatctttatttt 24392888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 15471288 - 15471100
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| | |||||||| ||||||| ||||| |||||| | ||||| ||| |||||||||||||||||||| || ||||| ||||| || ||| |||||    
T  15471288 acaagctacttgtttagtttatttctaacctaaagcccacggtttctcgtgcaacattctattgatgtatttctt-gggcttaagtatttgtagactata 15471190  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattg--tttctttgaataaaagttcatcttt 204  Q
    |||| || |||||||||||||||||| |||||| ||| |||||||| |||  | |||||||||  |||||||||||||||||||||||||    
T  15471189 aatagagtagctagcaaacatattgattcatctcttggtcttggaatttaataatgacaattgtttttctttgaataaaagttcatcttt 15471100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 20221190 - 20221285
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttctt 239  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| || |||||||||||    
T  20221190 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttattttcttgttatttacttttatgttcttcttctt 20221285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 22115174 - 22115269
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttctt 239  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| || |||||||||||    
T  22115174 tcatcttttgttcttggaaataataagtgacaattgtttttttgaataagtgttcatctttattttcttgttatttacttttatgttcttcttctt 22115269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 16207883 - 16207759
Alignment:
Q  71 acattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataa 169  Q
    ||||||||||||||||||| || | | | |||||||| ||| ||| ||||| ||||||||||||||||||||| |||||||||||| |  ||||||||||    
T  16207883 acattctattgatgtatttcttagagattaagtagttgtagactacaaatagagcagctagcaaacatattgagtcatcttttgttttcagaaattataa 16207784  T
Q  170 gtgacaattgtttctttgaataaaa 194  Q
    |||||||||||||||||||||||||    
T  16207783 gtgacaattgtttctttgaataaaa 16207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 15162087 - 15162276
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| |||||||||| ||||||| ||||| |||||  | ||||| |||||||||||||||||||||||| || ||||| |||||||| ||| |||||    
T  15162087 acaagcttcctgtttagtttatttctaacctaaagcccgcggtttctcgtggaacattctattgatgtatttctt-gggcttaagtagttgtagactata 15162185  T
Q  118 aata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttcatcttta 205  Q
    |||| |  |||||||| |||| |||| |||||| ||| |||||||| |||  |  |||||||||||  |||||||||||||||||||||||    
T  15162186 aatagaatagctagcatacatgttgattcatctcttggtcttggaagttaataaagacaattgttttcctttgaataaaagttcatcttta 15162276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 199
Target Start/End: Complemental strand, 17794149 - 17793991
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaataagcagctagcaaaca 136  Q
    ||||||||||||| |||||||  ||||||||||||||||||| |||||||||| ||||| || |||||||| ||  ||||  |      |||||||||||    
T  17794149 tatttctgacctaaagcccatagtttcttgtggaacattctactgatgtatttcttgggtcttaagtagttgtaaactattta------gctagcaaaca 17794056  T
Q  137 tattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttca 199  Q
    |||| |||||||| |||||||||||| |||  ||||||||||||||  |||||||||||||||||    
T  17794055 tattcaatcatctcttgttcttggaatttaatagtgacaattgtttacctttgaataaaagttca 17793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 25949222 - 25949392
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||| ||||| | |||| || ||||||||||||||||||| |||||||||  || ||  | ||||  |||||| ||||||||| || ||||    
T  25949222 ttagtttatttcttacctaaaagcccttggtttcttgtggaacattctagtgatgtattgcttaggttttaagtcattatagactataaatagagtagct 25949321  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||| | ||||   | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25949322 agctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 25949392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 24218729 - 24218809
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24218729 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 24218809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 25402538 - 25402458
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  25402538 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 25402458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 12660546 - 12660476
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttctt 212  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12660546 aatcatctttttttcttgaaaataataagtgacaattgtttctttgaataaaagttcatctttattttctt 12660476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 25963822 - 25963992
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | |||| |  ||||||||||||||||||| |||||||||  || ||  | |||| ||||| | ||||||||| || ||||    
T  25963822 ttagtttatttctgacctaaaagcccttagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatcgactataaatagagtagct 25963921  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||| | ||||   | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25963922 agctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttca 25963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 199
Target Start/End: Original strand, 25968469 - 25968639
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | |||| |  ||||||||||||||||||| |||||||||  || ||  | |||| ||||| | ||||||||| || ||||    
T  25968469 ttagtttatttctgacctaaaagcccttagtttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatcgactataaatagagtagct 25968568  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||| | ||||   | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25968569 agctatcataacaattcatcttttgttcttggaaataataagtgacaattgtttctttgaattaaagttca 25968639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 210217 - 210137
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  210217 tcatcttttgttctctgaaataatgagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 210137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18448784 - 18448864
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  18448784 tcatcttttgttctctgtaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 18448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18844475 - 18844555
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  18844475 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 18844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 26821762 - 26821929
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctata 117  Q
    ||||||| ||| |||||| ||||||| ||||| |||||||| ||||||||| |||||||||||||||||||| || ||||| |||||||| |||          
T  26821762 acaagctacctatttagtttatttctaacctaaagcccatggtttcttgtgaaacattctattgatgtatttcttagggcttaagtagttgtag------ 26821855  T
Q  118 aataagcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
           | ||||||| |||| | |||||| |||||||||||||| | ||||||||||||| ||||||| |||||||||||    
T  26821856 -------acctagcaatcataataaatcatattttgttcttggaattaataagtgacaattatttcttttaataaaagttc 26821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 18854633 - 18854713
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  |||||  ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  18854633 tcatcttttgttctctgaaatattaagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 18854713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 17743527 - 17743582
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17743527 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 17743582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 18233889 - 18233834
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18233889 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 18233834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 12658109 - 12658022
Alignment:
Q  151 ttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||  ||| || ||||||||||||    
T  12658109 ttgttgttggaaataataagcgacaattgtttctttgaataaaagttcatctttattttct--ttattttattttatgttcttcttcttc 12658022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 20464386 - 20464440
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20464386 tcatcttttgttcttgaaaattataagtgacaattgtttctttgaataaaagttc 20464440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 18195604 - 18195539
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  18195604 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 18195539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 19612922 - 19612718
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtag-----ttataggctataaata-agcagctag 130  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| |||||  ||||||| ||||||     || ||| ||||||| | ||   ||||    
T  19612922 tatttctgacctaaagcccatggtttcttgtggaacattctattgatatatttcatggggcttaagtagttgtattgtagactataaagagagtgtctag 19612823  T
Q  131 caaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactttcatatt 230  Q
    ||| || |   |||||||||||||||||| || | |  ||||||||||||||  || |||||||||||   |||||||||||||||||||  || |||||    
T  19612822 caatcaca-acaatcatcttttgttcttgaaattcaatagtgacaattgttttctttaataaaagttc--ttttattttcttgttattta--tttatatt 19612728  T
Q  231 cttcttcttc 240  Q
    ||||||||||    
T  19612727 cttcttcttc 19612718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 18184465 - 18184403
Alignment:
Q  147 tcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  18184465 tcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 18184403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 20221110 - 20221186
Alignment:
Q  21 agctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggct 98  Q
    |||||||| |||||| || |||||||||| || ||||| |||||||||||||||||||||||||||||| ||||||||    
T  20221110 agctgcctttttagtataattctgaccta-agaccatgttttcttgtggaacattctattgatgtatttcttggggct 20221186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 22115094 - 22115170
Alignment:
Q  21 agctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggct 98  Q
    |||||||| |||||| || |||||||||| || ||||| |||||||||||||||||||||||||||||| ||||||||    
T  22115094 agctgcctttttagtataattctgaccta-agaccatgttttcttgtggaacattctattgatgtatttcttggggct 22115170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 25339450 - 25339227
Alignment:
Q  18 acaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctat 116  Q
    ||||||||||| || ||| ||||||||||||| | |||| || ||||||||||||||||||| |||| ||||| || ||||| ||||  || ||  ||||    
T  25339450 acaagctgcctatt-agtttatttctgacctaaaagcccgtggtttcttgtggaacattctagtgatatatttcttagggcttaagtcattgtaaactat 25339352  T
Q  117 aaata-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgt 214  Q
    ||||| || ||||||||| || |   | ||||||||||||||||||| | |  |||||||||||| | | | ||||||||||| || |||| ||||||||    
T  25339351 aaatagagtagctagcaatcacaacaattcatcttttgttcttggaattcaatagtgacaattgtctttcttaataaaagttcttcttttactttcttgt 25339252  T
Q  215 tatttactttcatattcttcttcttc 240  Q
    |||||  ||| || ||||||||||||    
T  25339251 tattttattt-atgttcttcttcttc 25339227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 30245243 - 30245298
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  30245243 tcatattttgttcttggaaataataagtgacaattgtttatttgaataaaagttca 30245298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 25923548 - 25923367
Alignment:
Q  60 tttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttctt 158  Q
    ||||||||||||||||||| |||||||||| || ||||| ||||   | ||  ||||||||| || ||||||||| ||||   | |||||||||||||||    
T  25923548 tttcttgtggaacattctagtgatgtatttcttagggcttaagtcaatgtaaactataaatagagtagctagcaatcataacaattcatcttttgttctt 25923449  T
Q  159 ggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||| | |  |||||||||||| | | | ||||||||||| || |||| |||||||||||||  ||| || ||||||||||||    
T  25923448 ggaattcaatagtgacaattgtctttcttaataaaagttcttcttttactttcttgttattttattt-atgttcttcttcttc 25923367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 17284120 - 17284061
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||    
T  17284120 ttcttggaataaaagttcacctttattttattgttatttactttcttcttcttcttcttc 17284061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 32543282 - 32543341
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  32543282 ttcttggaataaaagttcacctttattttattgttatttacttttatgttcttcttcttc 32543341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 3923656 - 3923718
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatcttt 204  Q
    ||||||||||||||||  |||||||  ||||||||||||| |||||||||||||||| |||||    
T  3923656 aatcatcttttgttctctgaaattaatagtgacaattgttactttgaataaaagttcttcttt 3923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 9414358 - 9414412
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc 198  Q
    ||||||||||||||||| |||| | |||||||||| |||||||||||||||||||    
T  9414358 tcatcttttgttcttgggaattcttagtgacaattatttctttgaataaaagttc 9414412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 13217394 - 13217329
Alignment:
Q  174 caattgtttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||  ||| || ||||||||||||    
T  13217394 caattgtttcttttaataaaagttcttctttattttcttgttattttattt-atgttcttcttcttc 13217329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 5399257 - 5399314
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttct 238  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || ||||||||||    
T  5399257 ttcttggaataaaagttcacctttattttattgttatttacttttatgttcttcttct 5399314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 18627324 - 18627532
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||||||||||| | ||||||| ||| ||||||||||||||| |||| ||||| || ||||| ||||  || ||  ||||||||| || ||||    
T  18627324 ttagtttatttctgacctaaaagcccatggttttttgtggaacattctaatgatatatttcttagggcttaagtcattgtaaactataaatagagtagct 18627423  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgt-ttctttgaataaaagttcatctttattttcttgttatttactttcat 227  Q
    ||||| || |   | |||||||||||| |||||| | |  |||||||||||| |||||| |||||||||||   |||| |||||||||||||  ||| ||    
T  18627424 agcaatcacaacaattcatcttttgttattggaattcaatagtgacaattgtcttcttt-aataaaagttc--ttttactttcttgttattttattt-at 18627519  T
Q  228 attcttcttcttc 240  Q
     ||||||||||||    
T  18627520 gttcttcttcttc 18627532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 25031295 - 25031232
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattg-tttctttgaataaaagttcatcttt 204  Q
    ||||||||||||||||  |||||||  ||||||||||| ||||||||||||||||||| |||||    
T  25031295 aatcatcttttgttctctgaaattaatagtgacaattgttttctttgaataaaagttcttcttt 25031232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 32543132 - 32543290
Alignment:
Q  5 ttttgcttcccaaacaagctgcctgtttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||| ||| ||||||| ||| || ||| ||||||||||||| | |||| || ||||||||||||||| ||| |||||||||  || ||  | ||||    
T  32543132 ttttgctttccagacaagctacctatt-agtttatttctgacctaaaagcccttggtttcttgtggaacatcctagtgatgtattgcttaggttttaagt 32543230  T
Q  104 agttataggctataaata-agcagctagcaaacatattgaatcatcttttgttcttggaa 162  Q
     ||||||| ||||||||| || ||||||| | |||| | | ||||||||| |||||||||    
T  32543231 cgttatagactataaatagagtagctagctatcataataattcatcttttattcttggaa 32543290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 18993091 - 18993164
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    ||||| ||||||||||||| | ||||||| ||||||||||||||||||| |||| ||||| || ||||| ||||    
T  18993091 ttagtttatttctgacctaaaagcccatggtttcttgtggaacattctagtgatatatttcttagggcttaagt 18993164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 31965540 - 31965500
Alignment:
Q  200 tctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  31965540 tctttattttcttgttatttacttttatgttcttcttcttc 31965500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 2197317 - 2197262
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttctt 236  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||||| | ||||||||    
T  2197317 ttcttggaataaaatttcacctttattttattgttatttactttcttcttcttctt 2197262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 6794978 - 6795037
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| |||||||||  | ||||||||||| || ||||||||||||    
T  6794978 ttcttggaataaaagttcacctttattttactattatttacttttatgttcttcttcttc 6795037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 23524133 - 23524094
Alignment:
Q  34 gtctatttctgacctagagcccatgatttcttgtggaaca 73  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  23524133 gtctatttctgacctagagcccatgttttcttgtgcaaca 23524094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 25507616 - 25507651
Alignment:
Q  147 tcttttgttcttggaaattataagtgacaattgttt 182  Q
    |||||||||||||||||| |||||||||||||||||    
T  25507616 tcttttgttcttggaaataataagtgacaattgttt 25507651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 28734217 - 28734154
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattg-tttctttgaataaaagttcatcttt 204  Q
    |||||||||||||||| |||| |||  ||||||||||| ||||||||||||||| ||| |||||    
T  28734217 aatcatcttttgttctcggaatttaatagtgacaattgctttctttgaataaaatttcttcttt 28734154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 29093486 - 29093589
Alignment:
Q  60 tttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttctt 158  Q
    ||||||||||||||||||| |||||||||  || ||  | |||| ||||||| ||||||||| || ||||||| | ||||   | |||||||||||||||    
T  29093486 tttcttgtggaacattctagtgatgtattgcttaggttttaagtcgttatagactataaatagagtagctagctatcataacaattcatcttttgttctt 29093585  T
Q  159 ggaa 162  Q
    ||||    
T  29093586 ggaa 29093589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 12658218 - 12658152
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||||||||||||| ||||||||| |||| | || |||| ||||| || ||||| ||||    
T  12658218 tatttctgacctagagcccatggtttcttgtgcaacactttagtgatttatttcttagggctcaagt 12658152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 18396689 - 18396623
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagt 103  Q
    |||||||||||||||||||||| ||||||||| |||| | || |||| ||||| || ||||| ||||    
T  18396689 tatttctgacctagagcccatggtttcttgtgcaacactttagtgatttatttcttagggctcaagt 18396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 5399138 - 5399199
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggct 98  Q
    |||||||||||||||||||||| ||||||||| |||| | || |||| || || ||||||||    
T  5399138 tatttctgacctagagcccatggtttcttgtgcaacactttagtgatttaattcttggggct 5399199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 29686786 - 29686815
Alignment:
Q  60 tttcttgtggaacattctattgatgtattt 89  Q
    ||||||||||||||||||||||||||||||    
T  29686786 tttcttgtggaacattctattgatgtattt 29686815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 12660652 - 12660616
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  12660652 tatttctgacctagagcccatggtttcttgtgcaaca 12660616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 23517422 - 23517346
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgttat 217  Q
    |||||| |||||||| ||||| | |  ||||||||||||||  || ||||||||||| || ||||||||||||||||    
T  23517422 aatcatattttgttcatggaattcaatagtgacaattgttttctttaataaaagttcttcttttattttcttgttat 23517346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 29253886 - 29253922
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  29253886 tatttctgacctagagcccatggtttcttgtgcaaca 29253922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 29253995 - 29254089
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatc-tttattttcttgttatttactttcatattcttcttcttc 240  Q
    |||||||||||||| ||| | |  ||||||||||||||  || ||||||||||| || ||||||||||||||||||  ||| || ||||||||||||    
T  29253995 catcttttgttcttagaattcaatagtgacaattgttttctt-aataaaagttcttcctttattttcttgttattttattt-atgttcttcttcttc 29254089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 82771 - 82631
Alignment:
Q  60 tttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatcttttgttctt 158  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| || | |||||||||||||| |||||||||||||| ||    
T  82771 tttcttgtggaacattctattgatgtatttcttggggcttaagtagttatagactataaatagagtatctagcaaacatattcaatcatcttttgttttt 82672  T
Q  159 ggaaatt-ataagtgacaattgtttctttgaataaaagttc 198  Q
    ||||||| ||||||||| |||||||||||||||||| ||||    
T  82671 ggaaattaataagtgaccattgtttctttgaataaaggttc 82631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 425104 - 425024
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||   ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  425104 tcatcttttgttccctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 425024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 520669 - 520821
Alignment:
Q  54 ccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagctagcaaacatattgaatcatctttt 152  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||||| |||| ||||||  ||||||||| || ||||||||| || |   | |||||||||    
T  520669 ccatggtttcttgtggaacattctagtgatatatttcttggggcttaagttgttataaactataaatagagtagctagcaatcacaacaattcatctttt 520768  T
Q  153 gttcttggaaattataagtgacaattg-tttctttgaataaaagttcatcttt 204  Q
    ||| |||||| | |  ||||||||||| ||||| | ||||||||||| |||||    
T  520769 gttattggaattcaatagtgacaattgttttctcttaataaaagttcttcttt 520821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 22940 - 22753
Alignment:
Q  20 aagctgcctgtttagtctatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaa 119  Q
    ||||||||| |||||| || |||||||||| ||||  || |||||||||||| |||||||| ||||| || |||||| |  ||||||| ||  |||||||    
T  22940 aagctgcctatttagtttacttctgacctaaagcctgtggtttcttgtggaatattctattaatgtacttcttggggttttagtagttgtaaactataaa 22841  T
Q  120 ta-agcagctagcaaacatattgaatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatcttta 205  Q
    || || |||| |||||| |||| |||||||| |||||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  22840 tagagtagcttgcaaacgtattcaatcatctcttgttcttggaaatttatagtgacaattgtttcctttgaataaaagttcatcttta 22753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 38505 - 38578
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38505 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc-tctttattttcttgttatt 38578  T

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Target: scaffold1323 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 1983 - 1903
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  1983 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 1903  T

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Target: scaffold0123 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 2521 - 2601
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2521 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgttatttacttt 2601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 14007 - 14165
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaataagcagctagcaaaca 136  Q
    ||||||| ||||| | |||||  ||||||||||||||||||| |||||||| | ||||| || |||||||| ||  ||||  |      |||||||||||    
T  14007 tatttctaacctaaaacccatagtttcttgtggaacattctactgatgtatatcttgggacttaagtagttgtaaactattta------gctagcaaaca 14100  T
Q  137 tattgaatcatcttttgttcttggaaattataagtgacaattgttt--ctttgaataaaagttca 199  Q
    |||| |||||||| |||||||||||| |||  ||||||||||||||  |||||||||||||||||    
T  14101 tattcaatcatctcttgttcttggaatttaatagtgacaattgtttacctttgaataaaagttca 14165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 2022 - 1943
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttactt 223  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  2022 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttactttcatgttatttactt 1943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 18842 - 18765
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttac 221  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18842 tcatcttttgttctttgaaataataagggacaattgtttctttgaataaaagttcacctttactttcttgttatttac 18765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 19443 - 19523
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  19443 tcatcttttgttctcggaaataataagtgacaattggttctttgaacaaaagttcacctttactttcttgttatttacttt 19523  T

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Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 13734 - 13814
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||| |||||| | ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  13734 tcatcttttgttctcggaaataaaaagtgacaattgtttatttgaataaaagttcaactttactttcttgttatttacttt 13814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 27380 - 27462
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||    
T  27380 aatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttttcatttacttt 27462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 39376 - 39458
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||    
T  39376 aatcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttttcatttacttt 39458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 6431 - 6496
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  6431 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 6496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 11045 - 11110
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  11045 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 9040 - 9105
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  9040 tcatcttttgttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 9105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 21776 - 21699
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttac 221  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  21776 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttac 21699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 26923 - 26846
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttac 221  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  26923 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttac 26846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 9885 - 9821
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9885 catcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 9821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 48407 - 48487
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    |||||||||||||   ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  48407 tcatcttttgttccctgaaataataagtgacaattgtttctttgaataaaagttcacctttactttcttgtcatttacttt 48487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 23277 - 23332
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23277 tcatcttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 23332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 100380 - 100447
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  100380 aatcatcttttgttctctgaaataataagtgataattgtttctttgaataaaagttcacctttatttt 100447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 199 - 254
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  199 tcatcttttgttcttggaaatattaagtgacaattgtttctttgaataaaatttca 254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 77851 - 77906
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||| |||||||| ||||||||| |||||||||||  |||||||||||    
T  77851 tcatcttttgttattggaaataataagtgaccattgtttctttatataaaagttca 77906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 9167 - 9102
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  9167 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 9102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 17722 - 17657
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  17722 tcatctttggttctcggaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 17657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 48803 - 48868
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  48803 tcatcttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 48868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 163992 - 163927
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  163992 tcatcttttgttctgtgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 163927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 219
Target Start/End: Original strand, 172633 - 172821
Alignment:
Q  31 ttagtctatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatttattggggctaaagtagttataggctataaata-agcagct 128  Q
    ||||| ||||| ||||||| | |||| || |||||| |||||||||||| |||| ||||| |||||||| ||||  || ||  ||||||||| || ||||    
T  172633 ttagtttatttatgacctaaaagcccgtggtttcttctggaacattctagtgatatatttcttggggcttaagtcattgtaaactataaatagagtagct 172732  T
Q  129 agcaaacatattgaatcatcttttgttcttggaaattataagtgacaattg-tttctttgaataaaagttcatctttattttcttgttattt 219  Q
    ||||| || |   | ||||||||||||||||||| | |  ||||||||||| ||||| | |||||||||   |||||| |||||||||||||    
T  172733 agcaatcacaacaattcatcttttgttcttggaattcaatagtgacaattgttttctcttaataaaagt---tctttactttcttgttattt 172821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 9285 - 9235
Alignment:
Q  149 ttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9285 ttttgttcttggaaataataagtgacaattgtttctttgaataaaagttca 9235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 9345 - 9293
Alignment:
Q  37 tatttctgacctaga-gcccatgatttcttgtggaacattctattgatgtatt 88  Q
    ||||||||||||| | |||| || ||||||||||||||||||| |||||||||    
T  9345 tatttctgacctaaaagcccgtggtttcttgtggaacattctagtgatgtatt 9293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 8935 - 8877
Alignment:
Q  151 ttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8935 ttgttctatgaaataataagtgacaattgtttctttgaataaaagttcatctttatttt 8877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 8932 - 8878
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  8932 catcttttgttcgtggaaataataagtgacaattgtttctttgaataaaagttca 8878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 9041 - 9005
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  9041 tatttctgacctagagcccatggtttcttgtgcaaca 9005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 19021 - 18956
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||| |||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  19021 tcatctttagttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 18956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 61857 - 61937
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||| ||||  ||||| ||||||||||||||||||||||||||||| || | ||||| |||||||| |||||||||    
T  61857 tcatcttttcttctctgaaataataagtgacaattgtttctttgaataaaaattgacctttactttcttgtcatttacttt 61937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 33972 - 34032
Alignment:
Q  149 ttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttatttt 209  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  33972 ttttgttctctgaaataataagtgacaattgtttctttgaataaaagttcacctttatttt 34032  T

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Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 21658 - 21726
Alignment:
Q  142 aatcatcttttgttcttggaaattataagtgacaattgttt-ctttgaataaaagttcatctttatttt 209  Q
    ||||||||||||||||| ||| |||  |||||||||||||| |||| ||||||||||||||||||||||    
T  21658 aatcatcttttgttctttgaatttaatagtgacaattgttttcttttaataaaagttcatctttatttt 21726  T

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Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 38028 - 37948
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||||||||||  | ||| ||||||||||||||||||||| || ||||||||| ||||| |||||||| |||| ||||    
T  38028 tcatcttttgttctctgtaataataagtgacaattgtttctttaaacaaaagttcacctttactttcttgtcattttcttt 37948  T

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Target: scaffold0916 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 3525 - 3580
Alignment:
Q  144 tcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  3525 tcatcttttcttcttggaaataataagtgacaattgtctctttgaataatagttca 3580  T

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Target: scaffold0084 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 31666 - 31760
Alignment:
Q  146 atcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttcat-ctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||||||||||||||| | |  ||| |||||||| | ||| ||||||||||| | |||||||||||||||||||||||| || ||||||||||||    
T  31666 atcttttgttcttggaattaagtagtaacaattgtcttttttaataaaagttctttctttattttcttgttatttacttt-atgttcttcttcttc 31760  T

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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 49904 - 49958
Alignment:
Q  145 catcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttca 199  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||    
T  49904 catcttttgttcttggaaataataagtgacaattgttcctttgagtaaaaattca 49958  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 49794 - 49830
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  49794 tatttctgacctagagcccatggtttcttgtgcaaca 49830  T

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Target: scaffold0264 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 22468 - 22404
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttcatctc 245  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| || || ||||||||| ||||    
T  22468 ttcttggaataaaagttcacctttattttattgttatttacttttatgttattcttcttcttctc 22404  T

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Target: scaffold0264; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 22587 - 22551
Alignment:
Q  37 tatttctgacctagagcccatgatttcttgtggaaca 73  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  22587 tatttctgacctagagtccatgatttcttgtgcaaca 22551  T

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Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 44344 - 44285
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttcttcttc 240  Q
    ||||| ||||||||||||| ||||||||| ||||| |||||||| || ||||||||||||    
T  44344 ttcttggaataaaagttcacctttattttattgttgtttacttttatgttcttcttcttc 44285  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 21202 - 21257
Alignment:
Q  181 ttctttgaataaaagttcatctttattttcttgttatttactttcatattcttctt 236  Q
    ||||| |||||||||| || ||||||||| |||||||||||||| || ||||||||    
T  21202 ttcttggaataaaagtacacctttattttattgttatttacttttatcttcttctt 21257  T

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Target: scaffold0673 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 3251 - 3215
Alignment:
Q  188 aataaaagttcatctttattttcttgttatttacttt 224  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  3251 aataaaaattcatctttactttcttgttatttacttt 3215  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 21330 - 21413
Alignment:
Q  141 gaatcatcttttgttcttggaaattataagtgacaattgtttctttgaataaaagttc-atctttattttcttgttatttacttt 224  Q
    |||||||||||||||||||||| | |  | |||||||||| | | | |||||||||||  |||||| ||||||||||||||||||    
T  21330 gaatcatcttttgttcttggaattcaataatgacaattgtctttcttaataaaagttctttcttta-tttcttgttatttacttt 21413  T

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