View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10171_low_4 (Length: 343)

Name: NF10171_low_4
Description: NF10171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10171_low_4
NF10171_low_4
[»] chr7 (27 HSPs)
chr7 (9-296)||(18873133-18873420)
chr7 (9-291)||(15167948-15168230)
chr7 (9-287)||(10895795-10896073)
chr7 (9-295)||(14422758-14423043)
chr7 (13-302)||(13122904-13123193)
chr7 (18-302)||(12709833-12710117)
chr7 (9-291)||(16009351-16009631)
chr7 (13-302)||(13743487-13743774)
chr7 (9-302)||(12590633-12590924)
chr7 (9-302)||(13007207-13007497)
chr7 (95-289)||(16677152-16677348)
chr7 (95-289)||(17651388-17651584)
chr7 (236-328)||(21230923-21231015)
chr7 (236-291)||(11382871-11382926)
chr7 (236-291)||(11389348-11389403)
chr7 (236-315)||(20311026-20311107)
chr7 (172-291)||(13679428-13679548)
chr7 (236-320)||(148619-148703)
chr7 (237-292)||(2971254-2971309)
chr7 (277-328)||(14945072-14945123)
chr7 (277-328)||(15372665-15372716)
chr7 (237-292)||(20906461-20906516)
chr7 (237-291)||(11311059-11311113)
chr7 (256-297)||(831628-831669)
chr7 (256-297)||(1196808-1196849)
chr7 (256-297)||(34958578-34958619)
chr7 (235-291)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (9-296)||(22750914-22751201)
chr5 (9-328)||(38144500-38144817)
chr5 (9-291)||(28370055-28370335)
chr5 (9-291)||(19512160-19512441)
chr5 (9-296)||(23528405-23528690)
chr5 (227-291)||(18407944-18408008)
chr5 (236-315)||(22438723-22438803)
chr5 (227-291)||(23111200-23111264)
chr5 (236-328)||(42961566-42961658)
chr5 (276-328)||(1856445-1856497)
chr5 (276-328)||(21674415-21674467)
chr5 (237-292)||(19236900-19236955)
chr5 (177-302)||(34830024-34830149)
chr5 (239-292)||(22461158-22461211)
chr5 (239-292)||(22467782-22467835)
[»] chr3 (29 HSPs)
chr3 (9-291)||(14762758-14763040)
chr3 (9-289)||(38310802-38311082)
chr3 (9-289)||(20247791-20248063)
chr3 (9-289)||(24192728-24193009)
chr3 (9-291)||(9534102-9534382)
chr3 (9-292)||(23370505-23370787)
chr3 (7-289)||(55499104-55499385)
chr3 (9-292)||(24933828-24934109)
chr3 (123-315)||(16801444-16801635)
chr3 (83-302)||(41455087-41455304)
chr3 (230-291)||(18929239-18929300)
chr3 (227-291)||(17240513-17240577)
chr3 (276-328)||(24122221-24122273)
chr3 (32-292)||(10389443-10389702)
chr3 (237-292)||(13302240-13302295)
chr3 (237-292)||(13323787-13323842)
chr3 (178-292)||(10414532-10414646)
chr3 (178-292)||(10421202-10421316)
chr3 (276-328)||(13967762-13967814)
chr3 (276-328)||(13973237-13973289)
chr3 (237-292)||(12033444-12033499)
chr3 (237-292)||(13312896-13312951)
chr3 (237-292)||(17131732-17131787)
chr3 (237-292)||(51301589-51301644)
chr3 (277-315)||(18127695-18127733)
chr3 (277-315)||(18135465-18135503)
chr3 (277-305)||(14543478-14543506)
chr3 (277-305)||(16829104-16829132)
chr3 (277-305)||(16837626-16837654)
[»] scaffold0026 (2 HSPs)
scaffold0026 (9-302)||(11840-12133)
scaffold0026 (9-292)||(111460-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (13-299)||(956-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-299)||(49957-50241)
[»] chr4 (13 HSPs)
chr4 (13-302)||(8045822-8046110)
chr4 (15-315)||(11847886-11848191)
chr4 (103-292)||(53483573-53483760)
chr4 (236-328)||(15408139-15408231)
chr4 (102-292)||(27906130-27906321)
chr4 (235-291)||(8834895-8834951)
chr4 (235-291)||(13888641-13888697)
chr4 (208-289)||(14486632-14486713)
chr4 (235-291)||(15245215-15245271)
chr4 (235-286)||(22724691-22724742)
chr4 (277-313)||(1650182-1650219)
chr4 (256-297)||(15747551-15747592)
chr4 (235-291)||(15308120-15308176)
[»] chr8 (17 HSPs)
chr8 (9-289)||(8727735-8728015)
chr8 (9-292)||(44477397-44477678)
chr8 (9-292)||(44492555-44492836)
chr8 (13-302)||(23866391-23866680)
chr8 (17-328)||(27940815-27941127)
chr8 (9-302)||(17054366-17054656)
chr8 (182-291)||(18614217-18614327)
chr8 (227-291)||(23482053-23482117)
chr8 (236-328)||(14056527-14056619)
chr8 (235-291)||(39364919-39364975)
chr8 (236-302)||(25111976-25112042)
chr8 (237-291)||(29643386-29643440)
chr8 (276-328)||(30765873-30765925)
chr8 (237-292)||(24320670-24320725)
chr8 (267-327)||(21325730-21325791)
chr8 (268-327)||(21321132-21321192)
chr8 (235-291)||(21931696-21931752)
[»] chr6 (23 HSPs)
chr6 (58-291)||(23057760-23057993)
chr6 (9-315)||(29614124-29614429)
chr6 (9-291)||(23838972-23839253)
chr6 (9-302)||(10986170-10986462)
chr6 (7-328)||(18800210-18800529)
chr6 (9-291)||(4477631-4477912)
chr6 (7-289)||(21565214-21565494)
chr6 (157-302)||(930085-930229)
chr6 (9-315)||(12168138-12168440)
chr6 (9-315)||(19785847-19786149)
chr6 (9-315)||(19878231-19878533)
chr6 (9-302)||(19287047-19287337)
chr6 (9-315)||(19884007-19884309)
chr6 (103-292)||(34639986-34640173)
chr6 (103-292)||(34646660-34646847)
chr6 (178-292)||(25469704-25469816)
chr6 (236-328)||(24512807-24512899)
chr6 (95-291)||(9187352-9187550)
chr6 (235-291)||(25397172-25397228)
chr6 (235-291)||(19471335-19471391)
chr6 (235-291)||(25348486-25348542)
chr6 (208-292)||(31252394-31252478)
chr6 (235-289)||(25598643-25598697)
[»] chr2 (19 HSPs)
chr2 (9-291)||(19661454-19661734)
chr2 (9-291)||(6483492-6483772)
chr2 (9-291)||(6486959-6487239)
chr2 (7-315)||(26583600-26583904)
chr2 (7-289)||(23089057-23089337)
chr2 (7-289)||(23878781-23879060)
chr2 (7-291)||(23101463-23101745)
chr2 (178-292)||(5706023-5706137)
chr2 (227-291)||(23265133-23265197)
chr2 (227-291)||(23280201-23280265)
chr2 (230-291)||(21908353-21908414)
chr2 (235-291)||(24661576-24661632)
chr2 (277-328)||(6260135-6260186)
chr2 (284-328)||(19665037-19665081)
chr2 (237-292)||(10577-10632)
chr2 (111-302)||(23168288-23168483)
chr2 (111-302)||(23579545-23579740)
chr2 (237-292)||(25180929-25180984)
chr2 (220-301)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-289)||(14398-14678)
[»] scaffold0924 (1 HSPs)
scaffold0924 (13-302)||(740-1029)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-315)||(111674-111960)
[»] chr1 (12 HSPs)
chr1 (9-291)||(20437024-20437305)
chr1 (83-315)||(41111884-41112112)
chr1 (227-291)||(32651563-32651627)
chr1 (236-291)||(19663517-19663572)
chr1 (227-291)||(18712790-18712854)
chr1 (235-291)||(20805320-20805376)
chr1 (236-291)||(11158093-11158148)
chr1 (235-289)||(10811785-10811839)
chr1 (237-292)||(20851132-20851187)
chr1 (237-292)||(20857759-20857814)
chr1 (237-292)||(21706276-21706331)
chr1 (237-292)||(21710818-21710873)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-328)||(11116-11433)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-292)||(10195-10477)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-292)||(1525-1807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (9-302)||(1887-2179)
scaffold0117 (9-302)||(8564-8856)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-328)||(17946-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (9-315)||(65-368)
[»] scaffold0154 (1 HSPs)
scaffold0154 (95-328)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (7-289)||(3295-3576)
[»] scaffold0077 (1 HSPs)
scaffold0077 (7-289)||(3624-3904)
[»] scaffold0634 (1 HSPs)
scaffold0634 (9-132)||(3435-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (9-297)||(1727-2013)
scaffold0796 (101-297)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (209-296)||(904-991)
scaffold0456 (209-296)||(8049-8136)
scaffold0456 (52-148)||(806-901)
scaffold0456 (52-148)||(7951-8046)
[»] scaffold0129 (1 HSPs)
scaffold0129 (180-298)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (236-328)||(40495-40587)
[»] scaffold0235 (1 HSPs)
scaffold0235 (238-328)||(22556-22646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (236-321)||(135473-135558)
[»] scaffold0310 (1 HSPs)
scaffold0310 (236-315)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (227-291)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (227-291)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (236-291)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (227-291)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (227-291)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (227-291)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (240-302)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (102-302)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (203-302)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (208-292)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (172-291)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (235-291)||(12296-12352)
[»] scaffold0139 (2 HSPs)
scaffold0139 (236-291)||(14997-15052)
scaffold0139 (277-315)||(26892-26930)
[»] scaffold0001 (1 HSPs)
scaffold0001 (220-301)||(493019-493099)
[»] scaffold0790 (1 HSPs)
scaffold0790 (270-302)||(5487-5519)
[»] scaffold0249 (1 HSPs)
scaffold0249 (284-328)||(2212-2256)
[»] scaffold0096 (1 HSPs)
scaffold0096 (235-295)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (102-289)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (237-292)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (237-292)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (237-292)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (237-291)||(1913-1967)
[»] scaffold0067 (3 HSPs)
scaffold0067 (277-315)||(46708-46746)
scaffold0067 (277-305)||(55733-55761)
scaffold0067 (277-305)||(62119-62147)
[»] scaffold0453 (1 HSPs)
scaffold0453 (208-292)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (235-291)||(2628-2684)
[»] scaffold0005 (1 HSPs)
scaffold0005 (277-305)||(266108-266136)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 18873133 - 18873420
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  18873133 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 18873232  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18873233 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 18873332  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873333 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 15167948 - 15168230
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  15167948 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 15168047  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15168048 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 15168147  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168148 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 9 - 287
Target Start/End: Complemental strand, 10896073 - 10895795
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  10896073 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 10895974  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||    
T  10895973 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaat 10895875  T
Q  209 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttac 287  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10895874 ttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 295
Target Start/End: Original strand, 14422758 - 14423043
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  14422758 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 14422856  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  14422857 atatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 14422955  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 295  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14422956 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 13123193 - 13122904
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaaca 111  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||||||||||||||    
T  13123193 aacagcaacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca 13123094  T
Q  112 tagattaagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 210  Q
     |||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  13123093 -agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 13122995  T
Q  211 atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    || ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122994 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 302
Target Start/End: Complemental strand, 12710117 - 12709833
Alignment:
Q  18 caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagat 116  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| ||||    
T  12710117 caacaatcacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agat 12710019  T
Q  117 taagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt 215  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  12710018 taagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttatttt 12709919  T
Q  216 ccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709918 ccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 16009351 - 16009631
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||    
T  16009351 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaaca 16009449  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| ||||    
T  16009450 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaat 16009548  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16009549 ttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 13 - 302
Target Start/End: Original strand, 13743487 - 13743774
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    |||| ||||||| |||  ||| |||||||| |||||   ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| |||||    
T  13743487 aacagcaacaatcacatatcactccaccattatacaattattcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacat 13743585  T
Q  113 agattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 212  Q
    ||||||||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  13743586 agattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttat 13743685  T
Q  213 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
     ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743686 tttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 12590924 - 12590633
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||||||  |||||| |||||||| || | ||||||||||  || ||||   ||  || | |||||||||| ||| || |||||||    
T  12590924 catcaacaacaacaattacagaatcattctaccatcatccaaatattcatcaataaatacaattcatccaaaat-tcaatcaattaatggattacagcaa 12590826  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  12590825 caacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 12590728  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12590727 tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 302
Target Start/End: Original strand, 13007207 - 13007497
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  13007207 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 13007305  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  13007306 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 13007402  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13007403 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  95 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 194  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  195 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  95 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 194  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  195 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaagaattacacagca 315  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||||  ||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  172 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 270  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  271 gatagtctcacccttacctta 291  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 148619 - 148703
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatc 320  Q
    |||||||||||||  ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||  |||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatc 148703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 14945123 - 14945072
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||||||    
T  14945123 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttccta 14945072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 15372716 - 15372665
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||||||    
T  15372716 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttccta 15372665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  256 ttatgattatcgagagatagtctcacccttaccttagttttg 297  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  256 ttatgattatcgagagatagtctcacccttaccttagttttg 297  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  256 ttatgattatcgagagatagtctcacccttaccttagttttg 297  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 22750914 - 22751201
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  22750914 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 22751013  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22751014 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 22751113  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751114 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 328
Target Start/End: Complemental strand, 38144817 - 38144500
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||| |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||    
T  38144817 catcaagaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaaca 38144719  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| ||||||| |||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  38144718 gtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 38144620  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatta 308  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||    
T  38144619 ttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgatta 38144520  T
Q  309 cacagcacaatcgtttccta 328  Q
    ||||||||||||| ||||||    
T  38144519 cacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 28370335 - 28370055
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  28370335 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 28370237  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  28370236 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 28370138  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370137 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 19512160 - 19512441
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  19512160 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 19512258  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  19512259 gtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 19512357  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19512358 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 23528405 - 23528690
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||| ||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  23528405 catcaacaacaacaattatagaatcattctaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 23528503  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  23528504 caacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttca 23528601  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 296  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23528602 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 315  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 328
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 302
Target Start/End: Original strand, 34830024 - 34830149
Alignment:
Q  177 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 275  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  276 tctcacccttaccttagttttgcagaa 302  Q
    || ||||||||||||||  ||||||||    
T  34830123 tcccacccttaccttagaattgcagaa 34830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  239 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  239 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 14763040 - 14762758
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  14763040 catcaacaacaacaattacagatcactccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagca 14762941  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14762940 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 14762841  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762840 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 9 - 289
Target Start/End: Complemental strand, 38311082 - 38310802
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  38311082 catcaacaacaacaattacagatcattccaccttcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagca 38310983  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38310982 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 38310883  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310882 ttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 9 - 289
Target Start/End: Complemental strand, 20248063 - 20247791
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||        ||||| ||||||||| ||||||||||||||||||||||| ||    
T  20248063 catcaacaacaacaattacagatcattccaccatcatacacaaattcatc--------caatcactcataattttcaatcaatttatgatcacagcagca 20247972  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20247971 acaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 20247872  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20247871 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 289
Target Start/End: Original strand, 24192728 - 24193009
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaac 107  Q
    |||||||||||| || ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||    
T  24192728 catcaacaacaagaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaac 24192826  T
Q  108 aacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa 207  Q
    | ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24192827 agcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaa 24192926  T
Q  208 tttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24192927 tttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 9534102 - 9534382
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||    
T  9534102 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaaca 9534200  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| | || ||||||||||||||||||||||||||||||    
T  9534201 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaat 9534299  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9534300 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 23370787 - 23370505
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  23370787 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 23370689  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  23370688 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 23370590  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  23370589 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 55499385 - 55499104
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || || ||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  55499385 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttgatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 55499288  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |   |||||||||| |||||||| |||||| | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  55499287 ctgtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctca 55499189  T
Q  207 a-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattat-gattatcgagagatagtctcacccttacct 289  Q
    | |||||| | |||   || ||| ||||||||||||| | ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  55499188 attttatcct-caaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 24934109 - 24933828
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||| ||||||||||||  |||||| ||||||||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  ||||||    
T  24934109 catcaacagcaacaattacagaatcattctaccatcatacaaatattcatcaattcatacaatacatcaaaaat-tcaatcaattaatggattgcagcaa 24934011  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||    
T  24934010 caacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttca 24933913  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933912 tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 123 - 315
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  123 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 221  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  222 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagca 315  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 302
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  83 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 181  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  182 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 281  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  282 ccttaccttagttttgcagaa 302  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  230 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 292
Target Start/End: Complemental strand, 10389702 - 10389443
Alignment:
Q  32 cattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaacaacatagattaagttttcattct 130  Q
    ||||| |||| |||||| | |||||||||||||| ||||   ||| || | |||||||||| ||| ||  |||||||||||| | ||||| |||||||||    
T  10389702 cattctaccaacatacaaatattcatcaattcatacaattcatcaaaaat-tcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T
Q  131 gaacattatattacaacagaat-taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaa 229  Q
     ||| ||| ||| | | | ||  |||||| ||  |||||||||  || |||||||||||||||||||||||   |||  ||||  |  |||||||| |||    
T  10389603 taacgttaaattccgagaaaaactaacatcatctttacccatt--ccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaa 10389506  T
Q  230 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    |||| | | ||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  10389505 ttagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  178 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 277  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  278 tcacccttaccttag 292  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  178 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 277  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  278 tcacccttaccttag 292  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 18127733 - 18127695
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagca 315  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18127733 ctcacccttaccttagttttgcagaaaaaatacacagca 18127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 18135503 - 18135465
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagca 315  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18135503 ctcacccttaccttagttttgcagaaaaaatacacagca 18135465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 14543506 - 14543478
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  14543506 ctcacccttaccttagttttgcagaagaa 14543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 16829132 - 16829104
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  16829132 ctcacccttaccttagttttgcagaagaa 16829104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 16837654 - 16837626
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  16837654 ctcacccttaccttagttttgcagaagaa 16837626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 12133 - 11840
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||    
T  12133 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaaca 12034  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12033 acaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaat 11934  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11933 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 111460 - 111741
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  111460 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 111558  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  111559 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 111657  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111658 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 299
Target Start/End: Original strand, 956 - 1240
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||     
T  956 aacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca- 1054  T
Q  113 agattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  1055 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 1154  T
Q  213 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 299  Q
     ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1155 tttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 299
Target Start/End: Original strand, 49957 - 50241
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||     
T  49957 aacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca- 50055  T
Q  113 agattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 212  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  50056 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 50155  T
Q  213 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 299  Q
     ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50156 tttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 8046110 - 8045822
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||     
T  8046110 aacagcaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa 8046011  T
Q  113 agattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 212  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||  || |||||||||||||||||||||||    
T  8046010 ggattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttat 8045911  T
Q  213 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
     ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045910 tttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 315
Target Start/End: Original strand, 11847886 - 11848191
Alignment:
Q  15 caacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatag 114  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||    
T  11847886 caacaacaattacagatcattccatcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaag 11847985  T
Q  115 attaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------t 208  Q
    ||||||||||||||||||||||||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      |    
T  11847986 attaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattt 11848085  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatta 308  Q
    | || || ||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11848086 taatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aatta 11848184  T
Q  309 cacagca 315  Q
     ||||||    
T  11848185 gacagca 11848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 103 - 292
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  103 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 202  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  203 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 328
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||  ||| ||||| | ||||| ||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 292
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  102 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 201  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  202 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  208 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 286  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 1650219 - 1650182
Alignment:
Q  277 ctcacccttaccttagttttgcag-aagaattacacag 313  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1650219 ctcacccttaccttagttttgcagaaagaattacacag 1650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  256 ttatgattatcgagagatagtctcacccttaccttagttttg 297  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 9 - 289
Target Start/End: Complemental strand, 8728015 - 8727735
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  8728015 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaaca 8727916  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||    
T  8727915 gtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaat 8727817  T
Q  209 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727816 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 44477397 - 44477678
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  44477397 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 44477495  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  44477496 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 44477594  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477595 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 292
Target Start/End: Original strand, 44492555 - 44492836
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  44492555 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 44492653  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  44492654 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 44492752  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492753 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 13 - 302
Target Start/End: Original strand, 23866391 - 23866680
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaaca 111  Q
    |||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| ||||||||||    
T  23866391 aacagcaacaatcacagattattccaccatcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca 23866490  T
Q  112 tagattaagttttcattctgaacattatattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 210  Q
     |||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  23866491 -agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 23866589  T
Q  211 atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    || ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866590 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 27941127 - 27940815
Alignment:
Q  17 acaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagat 116  Q
    ||||||| || || ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||    
T  27941127 acaacaaatatagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagat 27941029  T
Q  117 taagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatct 214  Q
    ||| |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| |    
T  27941028 taaattttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttattt 27940930  T
Q  215 tccaa-aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacag 313  Q
    | ||| ||| || | | |    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||  |||||||||    
T  27940929 ttcaagaacaattctaatcaaacaattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacag 27940830  T
Q  314 cacaatcgtttccta 328  Q
    |||||||| ||||||    
T  27940829 cacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 9 - 302
Target Start/End: Original strand, 17054366 - 17054656
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctc-ataattctcaatcaatttatg-atcacagca 105  Q
    |||||||||||||||||| ||  |||||||||||||  |||  | ||||||||||||| ||||   || | |||||  |||||||| ||| || ||||||    
T  17054366 catcaacaacaacaattatagaatcattccaccatctcacaatatttcatcaattcatacaattcatccacaattc--aatcaattcatggattacagca 17054463  T
Q  106 acaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctc 205  Q
    ||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  ||    
T  17054464 acaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttc 17054560  T
Q  206 aatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  17054561 atcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  182 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 280  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  281 cccttacctta 291  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||||||||  ||| |||| || ||||| ||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  276 tctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 21325791 - 21325730
Alignment:
Q  267 gagagatagtctcacccttaccttagttttgcag-aagaattacacagcacaatcgtttcct 327  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  21325791 gagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  268 agagatagtctcacccttaccttagttttgcag-aagaattacacagcacaatcgtttcct 327  Q
    |||| ||||||| |||||||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 58 - 291
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  58 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 157  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  158 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 257  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  258 atgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 315
Target Start/End: Complemental strand, 29614429 - 29614124
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||    
T  29614429 catcaacaacaacacttacagattattccaccatcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaaca 29614330  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||| ||||||  | ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  29614329 acaaagattaagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaat 29614231  T
Q  209 tta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatt 307  Q
    ||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  29614230 ttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aatt 29614132  T
Q  308 acacagca 315  Q
    | ||||||    
T  29614131 agacagca 29614124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 23838972 - 23839253
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||| ||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  23838972 catcaacgacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 23839070  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||    
T  23839071 gtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaat 23839169  T
Q  209 ttatcttccaaa-actatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23839170 ttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 10986462 - 10986170
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||| |||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||    
T  10986462 catcaagaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaaca 10986364  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||    
T  10986363 gtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaat 10986265  T
Q  209 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986264 ttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 7 - 328
Target Start/End: Original strand, 18800210 - 18800529
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    ||||| ||||||||||||  ||| |||||||||||||||||  || |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||    
T  18800210 gacattaacaacaacaatg-cagatcattccaccatcataccaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaa 18800307  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||| |||||||||| ||||||| ||||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||    
T  18800308 caatatagattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctca 18800406  T
Q  207 att-tatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaa 305  Q
    ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  18800407 attctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaagga 18800506  T
Q  306 ttacacagcacaatcgtttccta 328  Q
    |||||||||| ||||| ||||||    
T  18800507 ttacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 4477631 - 4477912
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  || ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||    
T  4477631 catcaacaacaacaaatacagatcactccaccatcatacaaatctttatcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 4477729  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    | |||||||||||||||||||| ||||||| ||||||||||||||| |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  4477730 atatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 4477828  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4477829 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 21565494 - 21565214
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  21565494 gacatcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 21565397  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  21565396 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctca 21565298  T
Q  207 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 289  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  21565297 attttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  157 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 256  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  257 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 12168138 - 12168440
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  12168138 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 12168236  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  12168237 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 12168333  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaat 306  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  12168334 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aat 12168431  T
Q  307 tacacagca 315  Q
    || ||||||    
T  12168432 tagacagca 12168440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 315
Target Start/End: Complemental strand, 19786149 - 19785847
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19786149 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19786051  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19786050 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19785954  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaat 306  Q
     ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  19785953 ttttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aat 19785856  T
Q  307 tacacagca 315  Q
    || ||||||    
T  19785855 tagacagca 19785847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 19878231 - 19878533
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19878231 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19878329  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19878330 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19878426  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaat 306  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  19878427 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aat 19878524  T
Q  307 tacacagca 315  Q
    || ||||||    
T  19878525 tagacagca 19878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 302
Target Start/End: Original strand, 19287047 - 19287337
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19287047 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19287145  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19287146 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19287242  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19287243 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 19884007 - 19884309
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||| ||  |||||||||||||| |||  | ||||||||||||| ||||   ||  || | |||||||||| ||| || |||||||    
T  19884007 catcaacaacaacaattatagaatcattccaccatcacacaatatttcatcaattcatacaattcatccaaaat-tcaatcaattcatggattacagcaa 19884105  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    |||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  19884106 caacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttca 19884202  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaat 306  Q
      |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||    
T  19884203 tcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagttttgcagaa-aat 19884300  T
Q  307 tacacagca 315  Q
    || ||||||    
T  19884301 tagacagca 19884309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 292
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  103 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 202  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  203 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 103 - 292
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  103 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 202  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  203 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  178 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 277  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  278 tcacccttaccttag 292  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| |||||||||  ||| ||||||| ||||| ||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  95 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 194  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  195 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  208 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 19661734 - 19661454
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  19661734 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 19661636  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    | |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  19661635 atatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 19661537  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19661536 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 6483492 - 6483772
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  6483492 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 6483590  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  6483591 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 6483689  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6483690 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 6486959 - 6487239
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  6486959 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaaca 6487057  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| |||||||  ||||||||||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||    
T  6487058 gtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaat 6487156  T
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6487157 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 7 - 315
Target Start/End: Original strand, 26583600 - 26583904
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||| |||||||||||| |  |  |||||   | |||| || ||||||||||||    
T  26583600 gacatcaacaacaacaat-acagatcattccaccatcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaa 26583698  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| |||||||||||||||| ||||||||||||    
T  26583699 cattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctca 26583797  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaat 306  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  26583798 atttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aat 26583895  T
Q  307 tacacagca 315  Q
    || ||||||    
T  26583896 tagacagca 26583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 23089337 - 23089057
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||||||||||||||||    
T  23089337 gacatcaacaacaacaat-acagatcattccaccatcatacagaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaa 23089240  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  23089239 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctca 23089141  T
Q  207 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 289  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  23089140 attttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 23878781 - 23879060
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  |  || || |||||||||||||||||||| |||    
T  23878781 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaa 23878878  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||||| ||||||||||||||| | ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | ||||||||||||||    
T  23878879 cagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctca 23878977  T
Q  207 attt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||| ||| | |||   || |||||||||||||||||  ||||||||| || || ||||  |||||||||||||||||||||||    
T  23878978 atttaatcct-caaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 7 - 291
Target Start/End: Complemental strand, 23101745 - 23101463
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| || | |||||||||||||||||| || ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||    
T  23101745 gacatcaacaacaacaat-actgatcattccaccatcatacagaacttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaa 23101648  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||||| |||||||| |||| | | ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  23101647 cagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctca 23101549  T
Q  207 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacctta 291  Q
    | |||||| | |||   ||  ||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||||    
T  23101548 attttatcct-caaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  178 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 276  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  277 ctcacccttaccttag 292  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  230 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  284 ttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  111 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 210  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  211 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  111 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 210  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  211 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  220 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 301  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 9 - 289
Target Start/End: Complemental strand, 14678 - 14398
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||  | ||||||||||| ||||||||  ||||| || ||||||| ||||||||||||||||||    
T  14678 catcaacaacaacaaatacagatcattccaccatcataccaatattcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaaca 14580  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
     |||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14579 gcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 14480  T
Q  209 ttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14479 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 1029 - 740
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    |||||||||||| |||  || |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| ||||||||     
T  1029 aacaacaacaatcacaaatctttccaccatcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca- 931  T
Q  113 agattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 212  Q
    |||||||||||| || |||||||||||||||||| || |||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  930 agattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 831  T
Q  213 cttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  830 tttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 111674 - 111960
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||| ||    
T  111674 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaatt--------------------tcaatcaatttatgatcacagcagca 111753  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  111754 acaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 111853  T
Q  209 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatt 307  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  111854 ttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aatt 111952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 20437305 - 20437024
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  20437305 catcaacaacaacaaatacagatcattccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 20437207  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||    
T  20437206 gtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaat 20437108  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20437107 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 315
Target Start/End: Original strand, 41111884 - 41112112
Alignment:
Q  83 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 181  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  182 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 281  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  282 ccttaccttagttttgcagaagaattacacagca 315  Q
    ||||||||||||||||||||| ||||| ||||||    
T  41112080 ccttaccttagttttgcagaa-aattagacagca 41112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 328
Target Start/End: Original strand, 11116 - 11433
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||||||||||||| |||| ||| |||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||    
T  11116 catcaacaacaacaat-acagatcaatccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaaca 11213  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      || ||||||| ||||||| ||||||| | |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||    
T  11214 gtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaat 11312  T
Q  209 t-tatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatt 307  Q
    | ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  11313 tctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggatt 11412  T
Q  308 acacagcacaatcgtttccta 328  Q
    |||||||| ||||| ||||||    
T  11413 acacagcaaaatcggttccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 10477 - 10195
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  10477 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 10379  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  10378 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 10280  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10279 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 9 - 292
Target Start/End: Complemental strand, 1807 - 1525
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |  |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  1807 catcaacaacaacaaatacagatcactccaccatcatacaaatcttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaaca 1709  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
      |||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||    
T  1708 gtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaat 1610  T
Q  209 ttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  1609 ttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 2179 - 1887
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| ||||| | | |||||||| |||||||||||||||||    
T  2179 catcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaaca 2080  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    |||  ||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| ||||||||||||||||||||||||||     
T  2079 acaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaa 1982  T
Q  209 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1981 ttattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 9 - 302
Target Start/End: Complemental strand, 8856 - 8564
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    |||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||| ||||| || || | | |||||||| |||||||||||||||||    
T  8856 catcaacaacaacatttacagattattccaccatcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaaca 8757  T
Q  109 acatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat 208  Q
    |||  ||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||  || ||| ||||||||||||||||||||||||||     
T  8756 acaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaa 8659  T
Q  209 ttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8658 ttattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 166; Significance: 8e-89; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 13 - 328
Target Start/End: Original strand, 17946 - 18261
Alignment:
Q  13 aacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacat 112  Q
    ||||||||||||||||| ||||  |||||||||||| | ||||||||||| ||||||||  ||  |||| |||||||||| |||||||||||||||||||    
T  17946 aacaacaacaattacagatcatcacaccatcatacaaatattcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacat 18044  T
Q  113 agattaagttttcattctgaacattatattacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattta 211  Q
    || |||||||||||||||| |||| | ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||    
T  18045 aggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaattta 18143  T
Q  212 tcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattaca 310  Q
    | |||| ||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||    
T  18144 ttttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattaca 18243  T
Q  311 cagcacaatcgtttccta 328  Q
    || |||||||| ||||||    
T  18244 caacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 65 - 368
Alignment:
Q  9 catcaacaa-caacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaac 107  Q
    ||||||||| |||||| ||||| ||| |||||||| |||||   ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| |||     
T  65 catcaacaatcaacaaatacagatcactccaccattatacaattattcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaat 163  T
Q  108 aacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa 207  Q
    |||||||||||||| |||| ||||||||  ||| ||||| | |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  164 aacatagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaa 262  T
Q  208 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaatt 307  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  263 tttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa-aatt 360  T
Q  308 acacagca 315  Q
    | ||||||    
T  361 agacagca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 95 - 328
Target Start/End: Original strand, 30715 - 30949
Alignment:
Q  95 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 194  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  195 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 293  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  294 tttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||| ||||||||||| ||||| ||||||    
T  30915 tttgcagaaggattacacagcaaaatcgattccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 3576 - 3295
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||    
T  3576 gacatcaacaacaacaat-acagatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaa 3479  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctc 205  Q
    ||  |||||||||| ||||||||||||||| | ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  3478 cagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctc 3380  T
Q  206 aa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 289  Q
    || ||||||  ||||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3379 aattttatc-cccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 289
Target Start/End: Complemental strand, 3904 - 3624
Alignment:
Q  7 gacatcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaa 106  Q
    |||||||||||||||||| |||  |||||||||||||||||| || |||||||||||||||||||  | ||| || |||||||||||||||||||| |||    
T  3904 gacatcaacaacaacaat-acaaatcattccaccatcatacaaaacttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaa 3807  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    ||  |||||||||| |||||||| |||||| | ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||    
T  3806 cagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctca 3708  T
Q  207 a-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattatcgagagatagtctcacccttacct 289  Q
    | |||||| | |||   || |||||||||||||||||| ||||||| | |||||  ||||  |||||||||||||||||||||||    
T  3707 attttatcct-caaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 3435 - 3558
Alignment:
Q  9 catcaacaacaacaattacagctcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaaca 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||    
T  3435 catcaacaacaacaattacagatcattccaccatcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaaca 3534  T
Q  109 acatagattaagttttcattctga 132  Q
    ||| ||||||||||||||||||||    
T  3535 acaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 297
Target Start/End: Complemental strand, 2013 - 1727
Alignment:
Q  9 catcaacaacaacaattacagc-tcattccaccatcatacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatg-atcacagcaa 106  Q
    |||||||||||||||||||||  |||||| |||||||| |  | |||||||||||||| ||||   ||| || | ||||||| || ||| ||  ||||||    
T  2013 catcaacaacaacaattacagaatcattctaccatcatcccaatattcatcaattcatacaattcatcacaaat-tcaatcagttaatggattgcagcaa 1915  T
Q  107 caacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctca 206  Q
    || ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || ||||||||||||||||||||||||  |||    
T  1914 cagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttca 1817  T
Q  207 atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 297  Q
      |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1816 tattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  101 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 200  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  201 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 297  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 904 - 991
Alignment:
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 296  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

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Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  209 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 296  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 806 - 901
Alignment:
Q  52 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 148  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  52 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 148  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  180 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 278  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  279 cacccttaccttagttttgc 298  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  238 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||| ||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 135473 - 135558
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 321  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||||  ||| ||||||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcg 135558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 315  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  227 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  240 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 302  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 302
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  102 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 201  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  202 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 300  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  301 aa 302  Q
    ||    
T  23560 aa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 680 - 780
Alignment:
Q  203 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 301  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  302 a 302  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  208 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  172 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 270  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  271 gatagtctcacccttacctta 291  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  236 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 26892 - 26930
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagca 315  Q
    |||||||||||||||||||||||||| || |||||||||    
T  26892 ctcacccttaccttagttttgcagaaaaaatacacagca 26930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  220 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 301  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0790 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 5487 - 5519
Alignment:
Q  270 agatagtctcacccttaccttagttttgcagaa 302  Q
    |||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaa 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  284 ttaccttagttttgcagaagaattacacagcacaatcgtttccta 328  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 295  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 289
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  102 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 201  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  202 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 289  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  237 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 46746 - 46708
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaattacacagca 315  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagca 46708  T

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Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 55761 - 55733
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  55761 ctcacccttaccttagttttgcagaagaa 55733  T

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Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 62147 - 62119
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  62147 ctcacccttaccttagttttgcagaagaa 62119  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  208 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 292  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  235 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 291  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 266108 - 266136
Alignment:
Q  277 ctcacccttaccttagttttgcagaagaa 305  Q
    |||||||||||||||||||||||||||||    
T  266108 ctcacccttaccttagttttgcagaagaa 266136  T

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