View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10172_11 (Length: 321)
Name: NF10172_11
Description: NF10172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10172_11 |
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Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 22569467 - 22569175
Alignment:
| Q |
4 |
cagattctccaacgcagcaacaagaatcaatgcaagactctccttctcccccacaccaacaaccaccatccgactctcttccaccgccacagcaacaacc |
103 |
Q |
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| T |
22569467 |
cagattctccaacgcagcaacaagaatcaatgcaagactctccttctcccccacaccaacaaccaccatccgactctcttccactgccacagcaacaacc |
22569368 |
T |
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| Q |
104 |
acgtgactctcctcagcagaaaatacaatctgcacaatactcaccagaataatggctgccgcatccaagagtatccagggaggttcttacattggaaata |
203 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22569367 |
acgtgactctcctcagcagaaaatacaatctgcacaaaactcaccagaataatggctgccgcatccaagagtatccagggaggttcttacattggaaata |
22569268 |
T |
|
| Q |
204 |
gcttttcaatcgcactcacggctgacatatcgaagggtgtatagggtcctcgtctttatgaggattctcggtcatcatcgccaagaccaacac |
296 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
22569267 |
gcttttcaatcgcactcacggctgacatatggaagggtgtatagggtcctcgtctttatgaggattctcggtcatcatcaccaagaccaacac |
22569175 |
T |
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