View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10172_3 (Length: 412)
Name: NF10172_3
Description: NF10172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10172_3 |
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Alignment Details
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 400
Target Start/End: Original strand, 26304830 - 26305207
Alignment:
| Q |
19 |
agtcacttcaattaatggtacaaattgcatcatccacattgtgcattgtagaaaacaacttatgtgggaatgcacacacatgcataatggtatataagaa |
118 |
Q |
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| T |
26304830 |
agtcacttcaattaatggtacaaattgcatcatccacattgtgtattgtagaaaacaacttatgtgggaatacacacacatgcataatggtatataagaa |
26304929 |
T |
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| Q |
119 |
agcagcttcaacatatgataataacaaacaagtttcttctcttaaaatttgttggaaatcattattacatatacacttggccacatgcannnnnnnnnnn |
218 |
Q |
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| T |
26304930 |
agcagcttcaacatatgataataacaaacaagtttcttcccttaaaatttgttggaaatcattattacatatacaattggccacatgcatttttgttttg |
26305029 |
T |
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| Q |
219 |
nnnnngaaacaactatataaatttattgaaagcatacccaacacaagatgtgaataggcagcacaaagattacagtccttggtcacatgcatgtggaatg |
318 |
Q |
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| T |
26305030 |
tttttgaaactac----taaatttattgaaagcatacccaacacaagatgtgaataggcagcacaaagattacagtccttggtcacatgcatgtggaatg |
26305125 |
T |
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| Q |
319 |
tatatatatagtttataaatttattgaagatctcaagtttgtgaggtaaggatattggatctatgcattaaggtgtcctctc |
400 |
Q |
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| T |
26305126 |
tatatatatagtttataaatttattgagtatctcaagtttgtgaggtaaggatattggatctatgcatggaggtgtcctctc |
26305207 |
T |
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