View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10172_8 (Length: 351)
Name: NF10172_8
Description: NF10172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10172_8 |
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Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 43075909 - 43075560
Alignment:
| Q |
1 |
ggagctgcatgctaatagttggatacttgtatatataattaagttgttgttgtttagttgatatagtttttctatttgaacacttggaatggttgagatt |
100 |
Q |
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| T |
43075909 |
ggagctgcatgctaatagttggatacttgtatatataattaagttgttgttgtttagttgatatagtttttctatttgaacacttggaatggttgagatt |
43075810 |
T |
|
| Q |
101 |
aattcccaattctaaatttcaagtggttggtgattcagagaagcaccgtgggttgagaaggaagacttgccagaagtaactagacaaaagacaaagatga |
200 |
Q |
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| T |
43075809 |
aattcccaattttaaatttcaagtggttggtgattcagagaagcaccgtgggttgagaaggaagacttgccagaagtaactagacaaaagacaaagatga |
43075710 |
T |
|
| Q |
201 |
ggctataaattatatataacttacaattatgtgtaagaactcacagcaaagcattagtaaccactatttgtttgcattctaaagaactatcaatgtcctt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
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| T |
43075709 |
ggctataaattatatataacttacaattatgtgtaagaactcacaacaaagcattagtaaccactatttgtttgcattctaaagaaccatcaatgtactt |
43075610 |
T |
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| Q |
301 |
tcctttttgctttctttttgttctattgttgtaatttgtaaagaagtgct |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43075609 |
tcctttttgctttctttttgttctattgttgtaatttgtaaagaagtgct |
43075560 |
T |
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