View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10173_low_14 (Length: 252)
Name: NF10173_low_14
Description: NF10173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10173_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 47485499 - 47485260
Alignment:
| Q |
2 |
ccccttatttgtcaatctgcataatatatttatatctttgtgctcgtgcattgctcaaataagtgaaaaactatttacacttttgttagaatgacaaacc |
101 |
Q |
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| T |
47485499 |
ccccttatttgtcaatctgcataatatatttatatctttgtgctcgtgcattgctcaaataagtgaaaaactatatacacttttgttagaatgacaaacc |
47485400 |
T |
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| Q |
102 |
tgactctagagaaaacagataaataaacacatataagtaattaaacatttgaccaccgagttcagtcaattgtgcctacgtcttttatagttgagtggct |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47485399 |
tgactctagagaaaacagataaataaacacatataagtaattaaacatttgaccaccgagttcagtcaattgtgcctacgtcttttatagttgagtggct |
47485300 |
T |
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| Q |
202 |
gctgtacattgtggtgtttatatttatctatttacctatg |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
47485299 |
gctgtacattgtggtgtttatatttatctatttacctatg |
47485260 |
T |
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