View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_high_26 (Length: 249)
Name: NF10174_high_26
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 4677073 - 4677298
Alignment:
| Q |
1 |
accttcatatatactacgtacaaaaataatttgtatttgactttcgaaggataggacaattattggctcaatttaatgtttgaggttgtttcatgttata |
100 |
Q |
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| T |
4677073 |
accttcatatatactacgtacaaaaataatttgtatttgactttcgaaggataggacaattatgggctcaatttaatgtttgaggttgttttatgttata |
4677172 |
T |
|
| Q |
101 |
atcatagtatattgttgagttgagggagaacatgccattcgtaataagacataatttaagagagtgtcgggtttattttattttagagttttgtaagaaa |
200 |
Q |
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| T |
4677173 |
atcatagtatatt-----gttgagggagaacatgccattcgtaataagacataatttaagagagtgtcgggtttattttattttagagttttgtaataaa |
4677267 |
T |
|
| Q |
201 |
aggtggaaaattatgtacctatatgatacct |
231 |
Q |
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|||||||| |||||||||||||||||||||| |
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| T |
4677268 |
aggtggaagattatgtacctatatgatacct |
4677298 |
T |
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