View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_high_8 (Length: 413)
Name: NF10174_high_8
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10174_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 1 - 398
Target Start/End: Original strand, 7665710 - 7666107
Alignment:
Q |
1 |
agaactcatttctgaagcaattgaaagctgaacttgcaaagaatgatcacttacaaactattgtacaacaatgcctcaataatacagtcactgacagtaa |
100 |
Q |
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T |
7665710 |
agaactcatttctgaagcaattgaaagctgaacttgcaaagaatgatcacttacaaactattgtacaacaatgcctcaataatacagtcactgacagtaa |
7665809 |
T |
 |
Q |
101 |
ctacacagtgaaagaaggcttattatactggaagaacaaactagttttgccggtggatagttcattaatccaacaagtgttgcaagagtttcatgcttca |
200 |
Q |
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T |
7665810 |
ctacacagtgaaagaaggcttattatactggaagaacaaactagttttgccggtggatagttcattaatccaacaagtgttgcaagagtttcatgcttca |
7665909 |
T |
 |
Q |
201 |
ccgattggagggcatgcaggcattactaggactatggcacgaataagtgctgaattttattggccaaatatgaagacggcggttcacaagttcatcacag |
300 |
Q |
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T |
7665910 |
ccgattggagggcatgcaggcattactaggactatggcacgaataagtgctgaattttattggccaaatatgaagacggcggttcacaagttcatcacag |
7666009 |
T |
 |
Q |
301 |
aatgtctgatctgtcagcaggctaaacatatgactacactgccagcagggttgttgcagcctctaccaatacccactcaggtatgggaagatgttact |
398 |
Q |
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T |
7666010 |
aatgtctgatctgtcagcaggctaaacatatgactacactgccagcagggttgttgcagcctctgccaatacccactcaggtatgggaagatgttact |
7666107 |
T |
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Alignment Overview ]
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