View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_21 (Length: 370)
Name: NF10174_low_21
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 20 - 360
Target Start/End: Complemental strand, 12731831 - 12731492
Alignment:
| Q |
20 |
ggtatggtactctttgttctaattttgtagtgaaggcaagggtaaatcttgttcaagaatgaactaaattcttcaaacttgataatatactcgtcaaaac |
119 |
Q |
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| T |
12731831 |
ggtatggtagtctttgttctaattttgtagtgaaggcaagggtatatcttgttcaagaatgaactaaattcttcgaacttgataatgtact-gtcaaaac |
12731733 |
T |
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| Q |
120 |
tcacattcccctgagttggagataataattccatttctttcttgtcacgcaagttagagagaaaacacttctcaacataccttccttgaataaattgcag |
219 |
Q |
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| T |
12731732 |
tcacattcccctgagtgggagataataattccatttctttcttgtcacgcaagttagagagaaaacacttctcaacataccttccttgaataaattgcag |
12731633 |
T |
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| Q |
220 |
gtgacaagaaagaaatgaacaagtcagaatgaatagagagagtactaaacaatgttaagctaagttgaagctcaagaactatttctcacaaaggaaacag |
319 |
Q |
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| T |
12731632 |
gtgacaagaaagaaatgaacaagtcagaatgaatagagagagtactaaacaatgttaagctaagtcgaagctcaagaactatttctcacaaaggaaacag |
12731533 |
T |
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| Q |
320 |
tactctccctttcctgcaaaaatgaaactattactcctttg |
360 |
Q |
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| T |
12731532 |
tactctccctttcctgcaaaaatgaaactattactcctttg |
12731492 |
T |
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