View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_32 (Length: 328)
Name: NF10174_low_32
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 37326060 - 37325767
Alignment:
| Q |
17 |
attatcaatctcatcagtgnnnnnnncgtacttgactcgcagagattcatttccttcgaatgtaacactgacggtgtaccaagcgtcatctaagaagtta |
116 |
Q |
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| T |
37326060 |
attatcaatctcatcagtgtttttttcgtacttgactcgcagagattcatttccttcgaatgtaacactgacggtgtaccaagcgtcatctaagaagtta |
37325961 |
T |
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| Q |
117 |
cgaaactcggtgacgtaattctccttctgctcgtgaacgatcaactgcatttcttcgttgctaggcgtcatgttttcggtttgttgagaagctgagaggg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
37325960 |
cgaaactcggtgacgtaattctccttctgctcgtgaacgatcaactgcatttcttcgttgctaggcgtcatgttttccgtttgttgagaagctgagaggg |
37325861 |
T |
|
| Q |
217 |
ataaaacaacctcgcgtttactaggtttggtttgttttgacggtgtcgttttgcacttctccaccatttcaacgcttagtgatgaatgtgtgag |
310 |
Q |
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||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37325860 |
ataaaacgacatcgcgtttactaggtttggtttgttttgacggtgtcgttttgcacttctccaccatttcaacgcttagtgatgaatgtgtgag |
37325767 |
T |
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