View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_41 (Length: 291)
Name: NF10174_low_41
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 10467514 - 10467242
Alignment:
| Q |
1 |
aagaatatataatgtgaattaaaaagtcagcgttaaaatatatttgaccataccactttcttcaattaaataataggcagacttatttggttaaagggtc |
100 |
Q |
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| T |
10467514 |
aagaatatataatgtgaattaaaaagtcagcgttaaaatatatttgaccataccactttcttcaattaaataataggcagacttatttggttaaagggtc |
10467415 |
T |
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| Q |
101 |
aatgtgtaaaatataatttcaagttatgatcagctgccatgtatgtaggataaaatcattcttaaatatttcgaattaagaaaacttctacgtgtacaaa |
200 |
Q |
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| T |
10467414 |
aatgtgtaaaatataatttcaagttatgatcagctgccatgtatgtaggataaaatcattcttaaatattt-gagttaagaaaacttctacgtgtacaaa |
10467316 |
T |
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| Q |
201 |
caatttaagcatagaagatttgaatgattttttaatttgagcatattatgaatggtttttctcatgacacaatt |
274 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
10467315 |
caatttaaggatagaagatttgaatgattttttaatttgagcatattctgaatggtttttctcatgacacaatt |
10467242 |
T |
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