View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_57 (Length: 250)
Name: NF10174_low_57
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 42015765 - 42016003
Alignment:
| Q |
1 |
ttgacgatgaagcacatatttgtgtacactgtaacagttggtgagagtggtcctttagttgagagatggaagtggtcgaggccaaatgcacgtgtttata |
100 |
Q |
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| T |
42015765 |
ttgacgatgaagcacatatttgtgtacactgtaacagttggtgagagtggtcctttagttgagagatggaagtggtcgaggccaaatgcacgtgtttata |
42015864 |
T |
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| Q |
101 |
cattgttgattcagggtttggctgcatctttgagggtttcggatgctcttagtgtggttaaatatatatgtgaggtgggcgtctctccttctgaggaggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42015865 |
cattgttgattcagggtttggctgcatctttgagggtttcggatgctcttagtgtggttaaatatatatgtgaggtgggcgtctctccttctgaggaggt |
42015964 |
T |
|
| Q |
201 |
agggttaaataattttcttgtttctcttgagttcttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
42015965 |
agggttaaataattttcttgtttctcttgagttcttcat |
42016003 |
T |
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