View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_58 (Length: 250)
Name: NF10174_low_58
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_58 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 31026482 - 31026723
Alignment:
| Q |
1 |
cttcaaagtcaagcctatgcagtgctgactagttcagaaagtaaaaatggttagctatatcaatttggttattaaaatttagtgttaaaagtaattaagt |
100 |
Q |
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| T |
31026482 |
cttcaaagtcaagcctatgcagtgctgactagttcagaaagtaaatatggttagctatatcaatttggttattaaaatttagtgttaaaagtaattaagt |
31026581 |
T |
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| Q |
101 |
aacctggaagtttcataaatttaaggtccatgtagtattgaaaaatataaatacaaaaattatatcgcaattcagtatgtattctagggacgaaattgct |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
31026582 |
aacctagaagtttcataaatttaaggtccatgtagtattgaaaaatataaatacaaaaattatatcacaattcagtatgtattctagggacgaaattgct |
31026681 |
T |
|
| Q |
201 |
agctctttttgtttgaaaaattaacagtaattctttcttctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
31026682 |
agctctttttgtttgaaaaattaacagtaattctttcttctc |
31026723 |
T |
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