View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_73 (Length: 241)
Name: NF10174_low_73
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_73 |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 33392055 - 33392278
Alignment:
| Q |
1 |
acacattatgaaaaaactttctttatgagaacaaatttgttacattcaaacaaaggttttctgtaagcattttattttcggctcatacacactacagtag |
100 |
Q |
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| T |
33392055 |
acacattatgaaaaaactttctttatgagaacaaatttgttacattcaaacaaaggttttctgtaagcattttattttcggctcatacacactacagtag |
33392154 |
T |
|
| Q |
101 |
atgtttgattattcttagtaaagtatggctgagtttattacttgttaattgttatgaagcaacaaattaatgtgatgttggtgcatgatgagaatgttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33392155 |
atgtttgattattcttagtaaagtatggctgagtttattacttgttaattgttatgaagcaacaaattaatgtgatgttggtgcatgatgagaatgttta |
33392254 |
T |
|
| Q |
201 |
aaaatatatataaatgaacatttt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
33392255 |
aaaatatatataaatgaacatttt |
33392278 |
T |
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