View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10174_low_81 (Length: 237)
Name: NF10174_low_81
Description: NF10174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10174_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 46565533 - 46565725
Alignment:
| Q |
21 |
ataatagactggtcccatcaa-ctattctagtatatattttttcttgacacaaaatatactagtatcttgtatagagttagtgggataaaacatgaataa |
119 |
Q |
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| T |
46565533 |
ataatagactggtcccatcaaactattctagtatatattttttcttgacacaaaatatactagtatcttgtatagagttagtgggataaaacatgaataa |
46565632 |
T |
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| Q |
120 |
tttactaactagtgacaatgtcattttctattaattagtggctagctagtgggaaattaatcaaaataacaatgatgatgatgatgcataata |
212 |
Q |
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| T |
46565633 |
tttactaactagtgacagtgtcattttctattaattagtggctagctagtgggaaattaaacaaaataacaatgatgatgatgatgcataata |
46565725 |
T |
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