View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10175_low_14 (Length: 205)
Name: NF10175_low_14
Description: NF10175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10175_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 29140163 - 29140337
Alignment:
| Q |
20 |
atatccacttacattaagaaagtatagacaattaattagaccaattttttcttgtagatttatatacattcttgtttttaaaatcatattcatgaacatc |
119 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29140163 |
atatccacttatattaagaaagtatagacaattaattagaccaattttttcttgtagatttatatacattcttgtttttaaaatcatattcatgaacatc |
29140262 |
T |
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| Q |
120 |
tattgccgattttttcatgtatcgttattcaaatttttcaagtgcacatttcctgcaaacatattccccgtctct |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
29140263 |
tattgccgattttttcatgtatcgttattcaaatttttcaagtgcacatttcctgcaaacatattcaccgtctct |
29140337 |
T |
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