View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10175_low_5 (Length: 352)
Name: NF10175_low_5
Description: NF10175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10175_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 328
Target Start/End: Original strand, 34958458 - 34958767
Alignment:
| Q |
19 |
taatatttatcaagtattattatatgatcttgggattgaatagaagaaaatgtggtttcttttaaagactatatatgcgcatattctcactcttactagt |
118 |
Q |
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| T |
34958458 |
taatatttatcaagtattgttatatgatctttggattgaatagaagaaaatgtggtttcttttaaagactatatatgcgcatattctcactcttactagt |
34958557 |
T |
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| Q |
119 |
tcaggatatgtcagtagggtcgaaaaaagtcataattttgttttttgaaaatgaaaaacatatagaaattgtaattaagtaattaagtacaagaacaaag |
218 |
Q |
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| T |
34958558 |
tcaggatatgtcagtagggtcgaaaaaagtcataattttgttttttgaaaatgaaaaacatatagaaattgtaattaagtaattaagtacaataacaaag |
34958657 |
T |
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| Q |
219 |
tggaagcaagctttgtttgcaaggctttaaattgtgttagcaatccattaatggtactatgaataaaacggtgttcattgattgatgagaagatgaatat |
318 |
Q |
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| T |
34958658 |
tggaagcaagctttgtttgcaaggctttaaattgtgttagcaatccattaatggtactatgaataaaacagtgttcattgattgatgagaagatgaatat |
34958757 |
T |
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| Q |
319 |
atatcatcat |
328 |
Q |
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|||||||||| |
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| T |
34958758 |
atatcatcat |
34958767 |
T |
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