View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10175_low_7 (Length: 292)
Name: NF10175_low_7
Description: NF10175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10175_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 283
Target Start/End: Original strand, 32965275 - 32965539
Alignment:
| Q |
19 |
actggagtgttgattaatgggttagtcgaagcagaattcaacaaaaagcaggcaacattgctaaaacctaaagaaccaatctagagtagtaagatatata |
118 |
Q |
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| T |
32965275 |
actggagtgttgattaatgggttagtcgaagcagaattcaacaaaaagcaggcaacattgctaaaacctaaagaaccaatctagagtagtaagatatata |
32965374 |
T |
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| Q |
119 |
aatataattccaatatggaacctagtactagtagcaatgttacagattcagagttcgtggaaatacaattggatgtacatgaagttgttccaccacccca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32965375 |
aatataattccaatatggaacctagtactagtagcaatgttacagattcagagttcgtggaaatacaattggatgtacatgaagttgttccaccacccca |
32965474 |
T |
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| Q |
219 |
catgagcactgtacaaaaagtcaggaccaaattcaaggaaacatttttccctgatgatcctatgc |
283 |
Q |
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| T |
32965475 |
catgagcactgtacaaaaagtcaggaccaaattcaaggaaacatttttccctgatgatcctatgc |
32965539 |
T |
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