View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10176_high_11 (Length: 360)
Name: NF10176_high_11
Description: NF10176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10176_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 6 - 346
Target Start/End: Complemental strand, 45299653 - 45299313
Alignment:
| Q |
6 |
aggcaatttactatcaccgctagtttaatacaatttgaagcacattcattaaagacgatgcaatttgtacatctttttcgttctcagccactacataaca |
105 |
Q |
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| T |
45299653 |
aggcaatttactatcaccgctagtttaatacaatttgaagcacattcattaaagacgatgcaatttgtacatctttttcgttctcagccactacataaca |
45299554 |
T |
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| Q |
106 |
agaacgcaagcataaattgtggactttggttcttgcatttagcttatatgcttaaaattcatattgagagttgaataacagtcacattctgggggaatta |
205 |
Q |
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| T |
45299553 |
agaacgcaagcataaattgtggactttggttcttgcatttagcttatatgcttaaaattcatattgagagttgaatagcagtcacattctgggggaatta |
45299454 |
T |
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| Q |
206 |
ataaatatgccatgttcgcatacacatgaaatggatcgatcttatcttgtccatgtcgtcgtccacgaggccaaaattattgaagacattataagatacg |
305 |
Q |
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| T |
45299453 |
ataaatatgccatgttcgcatacacatgaaatggatcgatcttatcttgtccatgtcgtcgtccacgaggccaaaattattgaagacattataagatacg |
45299354 |
T |
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| Q |
306 |
ataacatcaaatactacaacgaagtccacataaattctttg |
346 |
Q |
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| T |
45299353 |
ataacatcaaatactacaacgaagtccacataaattctttg |
45299313 |
T |
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