View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10176_high_27 (Length: 271)

Name: NF10176_high_27
Description: NF10176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10176_high_27
NF10176_high_27
[»] chr4 (9 HSPs)
chr4 (16-256)||(35533265-35533505)
chr4 (34-87)||(9680605-9680658)
chr4 (34-87)||(51098256-51098309)
chr4 (36-84)||(1404366-1404414)
chr4 (33-87)||(51044533-51044588)
chr4 (34-86)||(19691349-19691401)
chr4 (34-86)||(19701934-19701986)
chr4 (34-86)||(22684592-22684644)
chr4 (34-90)||(31038943-31038999)
[»] chr3 (13 HSPs)
chr3 (34-256)||(32702895-32703132)
chr3 (34-87)||(1395612-1395665)
chr3 (38-107)||(2128331-2128400)
chr3 (33-87)||(40122827-40122881)
chr3 (34-84)||(49586992-49587042)
chr3 (34-83)||(15304423-15304472)
chr3 (95-132)||(23785134-23785171)
chr3 (38-87)||(36189507-36189556)
chr3 (34-87)||(42809242-42809295)
chr3 (34-87)||(44374720-44374773)
chr3 (38-87)||(48397587-48397636)
chr3 (34-85)||(21862251-21862303)
chr3 (35-87)||(48364956-48365008)
[»] chr2 (8 HSPs)
chr2 (34-87)||(40837504-40837557)
chr2 (40-87)||(40842419-40842466)
chr2 (33-84)||(32098383-32098434)
chr2 (33-87)||(40672871-40672925)
chr2 (34-63)||(35223342-35223371)
chr2 (34-71)||(43141828-43141865)
chr2 (39-87)||(19977902-19977950)
chr2 (35-87)||(35755579-35755631)
[»] chr7 (12 HSPs)
chr7 (34-87)||(5006585-5006638)
chr7 (34-89)||(28178908-28178963)
chr7 (34-87)||(27121662-27121715)
chr7 (34-87)||(35536048-35536101)
chr7 (34-86)||(3802215-3802267)
chr7 (38-138)||(12110250-12110350)
chr7 (36-90)||(2894755-2894809)
chr7 (34-72)||(23918913-23918951)
chr7 (34-84)||(39591543-39591593)
chr7 (34-87)||(1417205-1417258)
chr7 (38-87)||(2223089-2223138)
chr7 (38-86)||(43152982-43153030)
[»] chr6 (7 HSPs)
chr6 (34-84)||(281924-281974)
chr6 (34-87)||(29274305-29274358)
chr6 (95-138)||(32408821-32408864)
chr6 (45-87)||(2514643-2514685)
chr6 (37-87)||(24836278-24836328)
chr6 (38-84)||(34405049-34405095)
chr6 (34-86)||(323753-323805)
[»] chr1 (14 HSPs)
chr1 (33-87)||(50319233-50319287)
chr1 (34-83)||(15942823-15942872)
chr1 (37-89)||(37841937-37841989)
chr1 (35-86)||(49517012-49517063)
chr1 (56-134)||(1725209-1725287)
chr1 (37-87)||(36151584-36151634)
chr1 (33-87)||(38651484-38651538)
chr1 (38-84)||(46499934-46499980)
chr1 (33-82)||(14737780-14737829)
chr1 (34-87)||(23544716-23544769)
chr1 (32-77)||(45234148-45234193)
chr1 (34-66)||(17628561-17628593)
chr1 (38-90)||(33186037-33186089)
chr1 (35-87)||(40357963-40358015)
[»] chr8 (10 HSPs)
chr8 (34-87)||(1470932-1470985)
chr8 (34-87)||(4558739-4558792)
chr8 (35-87)||(42597342-42597394)
chr8 (33-87)||(36643946-36644000)
chr8 (37-87)||(37444494-37444544)
chr8 (27-84)||(6918249-6918305)
chr8 (38-87)||(14482143-14482192)
chr8 (34-87)||(31915345-31915398)
chr8 (33-66)||(43907874-43907907)
chr8 (35-87)||(34770833-34770885)
[»] chr5 (5 HSPs)
chr5 (34-142)||(4855584-4855692)
chr5 (37-84)||(38831535-38831582)
chr5 (34-87)||(34112816-34112869)
chr5 (35-87)||(6738484-6738536)
chr5 (49-125)||(11054089-11054165)
[»] scaffold0110 (1 HSPs)
scaffold0110 (95-125)||(34064-34094)
[»] scaffold0459 (1 HSPs)
scaffold0459 (59-120)||(8275-8336)
[»] scaffold0366 (1 HSPs)
scaffold0366 (59-120)||(8199-8260)
[»] scaffold0024 (1 HSPs)
scaffold0024 (34-87)||(27517-27570)


Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 35533265 - 35533505
Alignment:
Q  16 aagttgctctcagcttattatgaaaacaatttgactttaatttatcttttataataggaatagcttatacatgaatggatatgctataagctcttaatta 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  35533265 aagttgctctcagcttattatgaaaacaatttgactttaatttatcttttataataggaacagcttatacatgaatggatatgctataagcgcttaatta 35533364  T
Q  116 agttgtttatggaaacatggccttaatggtaggcattgagaaatacgaaaaaatagaataataacctgagaatagcttcgcagatgaatccattctcgta 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35533365 agttgtttatggaaacatggccttaatggtaggcattgagaaatacgaaaaaagagaataataacctgagaatagcttcgcagatgaatccattctcgta 35533464  T
Q  216 gagtttatcaagtttgatggtaggcattgaagccaccatgt 256  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35533465 gagtttatcaagtttgatggtaggcattgaagccaccatgt 35533505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 9680658 - 9680605
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||| ||||||||||||||| |||||||||||| || | ||||||||||||||    
T  9680658 tatgagaacaatttgactttattttatcttttattatcgaaatagcttatacat 9680605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 51098309 - 51098256
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||| || |||||| ||| |||||||||||||||||||||| |||||||||    
T  51098309 tatgaaagcagtttgacgttattttatcttttataataggaatatcttatacat 51098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 1404414 - 1404366
Alignment:
Q  36 tgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||||||| ||| |||||||||||| |||| |||||||||||    
T  1404414 tgaaaacaatttgaccttattttatcttttattatagaaatagcttata 1404366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 51044533 - 51044588
Alignment:
Q  33 ttatgaaaacaa-tttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||| |||||||||| |||||||||| | |||| ||||||||||||||    
T  51044533 ttatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacat 51044588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 19691401 - 19691349
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    ||||||||||  ||||||||| |||| ||||||| |||| |||||||||||||    
T  19691401 tatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19691349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 19701986 - 19701934
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    ||||||||||  ||||||||| |||| ||||||| |||| |||||||||||||    
T  19701986 tatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19701934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 22684592 - 22684644
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    ||||||||||||||||||||| |||| | ||| | |||| |||||||||||||    
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagcttataca 22684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 31038943 - 31038999
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacatgaa 90  Q
    ||||||||||||||||||||| ||||||| ||||  ||| |||| | ||||||||||    
T  31038943 tatgaaaacaatttgactttattttatctattattgtagaaataacgtatacatgaa 31038999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 256
Target Start/End: Complemental strand, 32703132 - 32702895
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacatgaa---------------tggatatgctataagctcttaattaagt 118  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||               ||||||||||||| || ||||| |||||    
T  32703132 tatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaatggatatgctatatgcgcttaactaagt 32703033  T
Q  119 tgtttatggaaacatggccttaatggtaggcattgagaaatacgaaaaaatagaataataacctgagaatagcttcgcagatgaatccattctcgtagag 218  Q
    ||||||| |||||||| ||||||||||||||||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  32703032 tgtttatcgaaacatgaccttaatggtaggcattgagaaataggagaaaagagagtaataacctgagaatagcttcgcagatgaatccattctggtagag 32702933  T
Q  219 tttatcaagtttgatggtaggcattgaagccaccatgt 256  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32702932 tttatcaagtttgatggcaggcattgaagccaccatgt 32702895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1395665 - 1395612
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||| |||||||||||| |||||||||| | |||| ||||||||||||||    
T  1395665 tatgaaaataatttgactttattttatcttttgttatagaaatagcttatacat 1395612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 2128331 - 2128400
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacatgaatggatatgctataagct 107  Q
    |||||||||| |||||| |||||||||| | |||| |||||||||||||| || |  |||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaacgcttatgctataagct 2128400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 40122827 - 40122881
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||| |||||||||| |||||||||| | || | ||||||||||||||    
T  40122827 ttatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacat 40122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 49586992 - 49587042
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    |||||||||| |||||||||| |||||||||| | |||| |||||||||||    
T  49586992 tatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 15304423 - 15304472
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttat 83  Q
    |||||||||||||| |||||| |||||||||| | |||| ||||||||||    
T  15304423 tatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 23785171 - 23785134
Alignment:
Q  95 tatgctataagctcttaattaagttgtttatggaaaca 132  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  23785171 tatgctataagcacttaattaagttgtttatgcaaaca 23785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 36189556 - 36189507
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||| |||||| |||||||||| ||| || ||||||||||||||    
T  36189556 aaaacaatttaactttattttatcttttgtaagagaaatagcttatacat 36189507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 42809295 - 42809242
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||| ||| || |||||||||| | |||| ||||||||||||||    
T  42809295 tatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 44374720 - 44374773
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| |||||||||| | | ||  |||||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacat 44374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 48397636 - 48397587
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||| |||||||||||| |||  |||| |||||||||    
T  48397636 aaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 21862251 - 21862303
Alignment:
Q  34 tatgaaaacaatttgactt-taatttatcttttataataggaatagcttatac 85  Q
    ||||||||||||||||||| || |||||||||| |||||| || |||||||||    
T  21862251 tatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatac 21862303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 48364956 - 48365008
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||| |||||||||| | || | |||| |||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacat 48365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 40837504 - 40837557
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  40837504 tatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 40842419 - 40842466
Alignment:
Q  40 aacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||    
T  40842419 aacaatttgactttaatttatcttttgtaatagaaatagcttctacat 40842466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 32098383 - 32098434
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||| |||||||||| |||||||||| | |||| |||||||||||    
T  32098383 ttatgaaaacactttgactttattttatcttttgttatagaaatagcttata 32098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 40672871 - 40672925
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||| |||||||| |||||||||| | |||| |||| |||||||||    
T  40672871 ttatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacat 40672925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 35223342 - 35223371
Alignment:
Q  34 tatgaaaacaatttgactttaatttatctt 63  Q
    ||||||||||||||||||||||||||||||    
T  35223342 tatgaaaacaatttgactttaatttatctt 35223371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 43141865 - 43141828
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataata 71  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  43141865 tatggaaacaatttgactttactttatcttttataata 43141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 19977950 - 19977902
Alignment:
Q  39 aaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||  |||||||||| | |||| ||||||||||||||    
T  19977950 aaacaatttgactttgttttatcttttcttatagcaatagcttatacat 19977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 35755579 - 35755631
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||| ||| | ||| || |||| ||||||||||||||    
T  35755579 atgaaaacaatttgactttattttctatttgattatagaaatagcttatacat 35755631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 5006585 - 5006638
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||| |||||||||| |||||||||| | |||||||||||||||||||    
T  5006585 tatgaaaacagtttgactttattttatcttttgttataggaatagcttatacat 5006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 28178963 - 28178908
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacatga 89  Q
    |||||||||||| |||||||| |||||||||| | |||| ||||||||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacatga 28178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 27121662 - 27121715
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| |||||| ||||| |||| |||| |||||||||    
T  27121662 tatgaaaacaatttgactttattttatcatttattatagaaatatcttatacat 27121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 35536101 - 35536048
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| |||||||| | | |||| ||||||||||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacat 35536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 3802215 - 3802267
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    ||||||||| ||||||||||| |||| ||||||| |||| |||||||||||||    
T  3802215 tatgaaaacgatttgactttattttaccttttattatagaaatagcttataca 3802267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 12110350 - 12110250
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttgtttatggaaacatggcc 137  Q
    ||||||||||||||||| |||||||| | |||||| ||||| |||| ||| | ||  ||||||||||| |   ||||||| ||||||| |||||| ||||    
T  12110350 aaaacaatttgactttattttatcttgtgtaatagaaataggttattcataagtgcttatgctataagttgcaaattaagctgtttatcgaaacagggcc 12110251  T
Q  138 t 138  Q
    |    
T  12110250 t 12110250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 2894809 - 2894755
Alignment:
Q  36 tgaaaacaatttgactttaatttatcttttataataggaatagcttatacatgaa 90  Q
    |||||||| ||  ||||||||||||||||| | |||| |||||||||||||||||    
T  2894809 tgaaaacagttcaactttaatttatcttttgttatagaaatagcttatacatgaa 2894755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 23918951 - 23918913
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataatag 72  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  23918951 tatgaaaacaatttgactttattttatcttttgtaatag 23918913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 39591543 - 39591593
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||||||||||||| |||||||||| | |||| |||| ||||||    
T  39591543 tatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1417258 - 1417205
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| |||||||||| | |||  ||||| ||||||||    
T  1417258 tatgaaaacaatttgactttattttatcttttgttatataaatagtttatacat 1417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 2223138 - 2223089
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||  |||||||||| | |||| ||||||||||||||    
T  2223138 aaaacaatttgacttttctttatcttttgttatagaaatagcttatacat 2223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 43152982 - 43153030
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    |||||||||| |||||| |||||||||| | |||| |||||||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 281924 - 281974
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||| ||||||||| |||||||||| | ||||||||||||||||    
T  281924 tatgaaaacaagttgactttattttatcttttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 29274305 - 29274358
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| ||||||||||   |||| ||||||||||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacat 29274358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 32408864 - 32408821
Alignment:
Q  95 tatgctataagctcttaattaagttgtttatggaaacatggcct 138  Q
    |||||||||| | |||||||||||||||||| ||||||||||||    
T  32408864 tatgctataaacacttaattaagttgtttatcgaaacatggcct 32408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 2514685 - 2514643
Alignment:
Q  45 tttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacat 2514643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 24836278 - 24836328
Alignment:
Q  37 gaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||| |||||||||| | |||| |||| |||||||||    
T  24836278 gaaaacaatttgactttattttatcttttgttatagaaataacttatacat 24836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 34405095 - 34405049
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||||||||| |||| ||||||| |||| |||||||||||    
T  34405095 aaaacaatttgactttattttaacttttattatagaaatagcttata 34405049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 323805 - 323753
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    |||||||||| ||||| |||| |||||||||||  |||| |||||||||||||    
T  323805 tatgaaaacagtttgaatttattttatcttttaatatagaaatagcttataca 323753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 50319287 - 50319233
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||| ||||||||| |||||||||| | |||| ||||||||||||||    
T  50319287 ttatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacat 50319233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 15942823 - 15942872
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttat 83  Q
    ||||||||||| ||||||||| |||||||| |||||||| ||||||||||    
T  15942823 tatgaaaacaaattgactttattttatcttgtataatagaaatagcttat 15942872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 37841989 - 37841937
Alignment:
Q  37 gaaaacaatttgactttaatttatcttttataataggaatagcttatacatga 89  Q
    ||||||||||| |||||| |||||| ||| | |||||||||||||||||||||    
T  37841989 gaaaacaatttaactttattttatcatttgttataggaatagcttatacatga 37841937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 49517063 - 49517012
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttataca 86  Q
    |||||||||||||||||||| |||||||||| | |||| |||| ||||||||    
T  49517063 atgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 1725209 - 1725287
Alignment:
Q  56 tttatcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttgtttatggaaacatg 134  Q
    |||||||||||| |||| ||||| ||||||||   ||  ||||||||||||||  |||||||||||||||  |||||||    
T  1725209 tttatcttttattatagaaatagtttatacatacctgcttatgctataagctccaaattaagttgtttatacaaacatg 1725287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 36151584 - 36151634
Alignment:
Q  37 gaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||| |||||||||| | || | ||||||||||||||    
T  36151584 gaaaacaatttgactttattttatcttttgttattgaaatagcttatacat 36151634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 38651484 - 38651538
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||| ||||||| |||||||||| | |||| | ||||||||||||    
T  38651484 ttatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacat 38651538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 46499934 - 46499980
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||||||||||| |||||||||| | |||| |||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttata 46499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 14737780 - 14737829
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagctta 82  Q
    |||||||||||||||||||||| |||||||||| | |||| |||| ||||    
T  14737780 ttatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 23544716 - 23544769
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||| | ||||||||||   |||| ||||||||||||||    
T  23544716 tatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacat 23544769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 45234193 - 45234148
Alignment:
Q  32 attatgaaaacaatttgactttaatttatcttttataataggaata 77  Q
    |||||||||| |||||||||||| |||||||||||| |||| ||||    
T  45234193 attatgaaaataatttgactttattttatcttttattatagaaata 45234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 17628593 - 17628561
Alignment:
Q  34 tatgaaaacaatttgactttaatttatctttta 66  Q
    ||||||||||||||||||||| |||||||||||    
T  17628593 tatgaaaacaatttgactttactttatctttta 17628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 33186037 - 33186089
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacatgaa 90  Q
    ||||||||| ||| ||| |||||||| | |||||| |||||||||||||||||    
T  33186037 aaaacaattcgaccttattttatcttctgtaatagaaatagcttatacatgaa 33186089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 40357963 - 40358015
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||| ||||||  || | |||| ||||||||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacat 40358015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 1470932 - 1470985
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||  |||||||||||| |||||||||||| |||| ||||||||||||||    
T  1470932 tatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 4558792 - 4558739
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||| ||||| |||||| |||||||||||| |||| ||||||||||||||    
T  4558792 tatgaaaataatttaactttattttatcttttattatagaaatagcttatacat 4558739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 42597394 - 42597342
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||| |||||| |||||||||| | |||| ||||||||||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacat 42597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 36643946 - 36644000
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||| | |||||||||| | |||||||||| |||| ||||||||||||||    
T  36643946 ttatgaaaatagtttgactttactgtatcttttattatagaaatagcttatacat 36644000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 37444494 - 37444544
Alignment:
Q  37 gaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||| |||||| |||||||||| | |||| ||||||||||||||    
T  37444494 gaaaacaatttaactttactttatcttttgttatagtaatagcttatacat 37444544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 6918249 - 6918305
Alignment:
Q  27 agcttattatgaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||||| ||||||| |||||||||| |||||||||||| |||  |||||||||||    
T  6918249 agcttatta-gaaaacagtttgactttattttatcttttattatataaatagcttata 6918305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 14482192 - 14482143
Alignment:
Q  38 aaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||| |||||||||| | |||| ||||| ||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacat 14482143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 31915345 - 31915398
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| | |||||||| | ||||  |||||||||||||    
T  31915345 tatgaaaacaatttgactttattctatcttttgttatagatatagcttatacat 31915398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 43907874 - 43907907
Alignment:
Q  33 ttatgaaaacaatttgactttaatttatctttta 66  Q
    |||||||||||||||||||||| |||||||||||    
T  43907874 ttatgaaaacaatttgactttattttatctttta 43907907  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 34770885 - 34770833
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    |||||||||||||||||||| |||||||||| |||| | ||||| || |||||    
T  34770885 atgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacat 34770833  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 4855692 - 4855584
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttgtttatggaaacat 133  Q
    ||||| |||||||| |||||| ||||| |||| | |||  ||||||| |||||| | |   |||||||||||   |||||||||||||||||  ||||||    
T  4855692 tatgataacaatttaactttattttattttttgttataaaaatagctaatacataagtacttatgctataagtatttaattaagttgtttatccaaacat 4855593  T
Q  134 ggccttaat 142  Q
    |||||||||    
T  4855592 ggccttaat 4855584  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38831535 - 38831582
Alignment:
Q  37 gaaaacaatttgactttaatttatcttttataataggaatagcttata 84  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||||    
T  38831535 gaaaacagtttgactttattttatcttttataacagaaatagcttata 38831582  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 34112869 - 34112816
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||| || ||||||||| ||||||||  |||| ||||||||||||||    
T  34112869 tatgaaaacaacttaactttaattaatcttttactatagaaatagcttatacat 34112816  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 6738484 - 6738536
Alignment:
Q  35 atgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||| |||||||||||| ||| |||||||| || | ||||||||||||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacat 6738536  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 11054165 - 11054089
Alignment:
Q  49 actttaatttatcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttgtttat 125  Q
    |||||| |||||||||||| |||| |||||||||||||| |  |  ||||||||||||    |||||||||||||||    
T  11054165 actttattttatcttttattatagaaatagcttatacataagcgtttatgctataagccggaaattaagttgtttat 11054089  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 125
Target Start/End: Original strand, 34064 - 34094
Alignment:
Q  95 tatgctataagctcttaattaagttgtttat 125  Q
    |||||||||||||||||||||||||||||||    
T  34064 tatgctataagctcttaattaagttgtttat 34094  T

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Target: scaffold0459 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 8275 - 8336
Alignment:
Q  59 atcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttg 120  Q
    ||||||| | |||| |||||||||||||| | | | |||||||||||| |||||||||||||    
T  8275 atcttttgttatagaaatagcttatacataagtagttatgctataagcacttaattaagttg 8336  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 8199 - 8260
Alignment:
Q  59 atcttttataataggaatagcttatacatgaatggatatgctataagctcttaattaagttg 120  Q
    ||||||| | |||| |||||||||||||| | | | |||||||||||| |||||||||||||    
T  8199 atcttttgttatagaaatagcttatacataagtagttatgctataagcacttaattaagttg 8260  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 27570 - 27517
Alignment:
Q  34 tatgaaaacaatttgactttaatttatcttttataataggaatagcttatacat 87  Q
    ||||||||||||||||||||| |||||||| | | |||| |||| |||||||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataacttatacat 27517  T

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