View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10176_low_22 (Length: 318)

Name: NF10176_low_22
Description: NF10176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10176_low_22
NF10176_low_22
[»] chr4 (24 HSPs)
chr4 (14-318)||(2365472-2365776)
chr4 (87-245)||(9777909-9778067)
chr4 (79-312)||(55725082-55725315)
chr4 (79-222)||(8935605-8935748)
chr4 (87-315)||(48805517-48805745)
chr4 (149-312)||(3129365-3129528)
chr4 (87-219)||(2072079-2072211)
chr4 (123-174)||(4551330-4551381)
chr4 (149-315)||(23872849-23873015)
chr4 (131-222)||(19115019-19115110)
chr4 (126-276)||(55464285-55464435)
chr4 (152-243)||(42952950-42953041)
chr4 (155-255)||(53810448-53810548)
chr4 (79-222)||(23657828-23657971)
chr4 (87-190)||(29553238-29553341)
chr4 (88-258)||(7099022-7099192)
chr4 (149-315)||(20675623-20675789)
chr4 (168-222)||(26694548-26694602)
chr4 (79-227)||(54482620-54482768)
chr4 (88-198)||(9690962-9691072)
chr4 (152-222)||(19648306-19648376)
chr4 (88-198)||(54685150-54685260)
chr4 (275-315)||(19648422-19648462)
chr4 (122-170)||(38445613-38445661)
[»] chr2 (19 HSPs)
chr2 (76-287)||(20004486-20004698)
chr2 (92-317)||(32191609-32191825)
chr2 (154-256)||(36804725-36804827)
chr2 (154-297)||(35488443-35488586)
chr2 (152-315)||(11233863-11234026)
chr2 (143-312)||(12646116-12646285)
chr2 (180-243)||(9409673-9409736)
chr2 (154-258)||(8065691-8065795)
chr2 (140-315)||(13550709-13550884)
chr2 (140-315)||(13551162-13551337)
chr2 (131-222)||(28400016-28400107)
chr2 (79-164)||(43310790-43310875)
chr2 (87-243)||(9668451-9668607)
chr2 (131-222)||(15018260-15018351)
chr2 (124-203)||(28598519-28598598)
chr2 (153-219)||(22724908-22724974)
chr2 (76-154)||(37445621-37445699)
chr2 (79-164)||(26146746-26146831)
chr2 (184-317)||(33583798-33583931)
[»] chr3 (32 HSPs)
chr3 (79-316)||(5342584-5342821)
chr3 (169-274)||(38774893-38774998)
chr3 (154-258)||(15481188-15481292)
chr3 (154-258)||(24926118-24926222)
chr3 (87-199)||(25024333-25024445)
chr3 (154-258)||(36709516-36709620)
chr3 (127-318)||(40513094-40513285)
chr3 (79-243)||(44888435-44888599)
chr3 (114-222)||(53941869-53941977)
chr3 (122-227)||(9510326-9510431)
chr3 (122-227)||(9518301-9518406)
chr3 (79-164)||(52250648-52250733)
chr3 (93-318)||(55367155-55367379)
chr3 (86-222)||(6825360-6825496)
chr3 (154-315)||(21739896-21740057)
chr3 (145-315)||(22734096-22734266)
chr3 (79-299)||(14863854-14864074)
chr3 (149-318)||(34829994-34830163)
chr3 (154-258)||(42674869-42674973)
chr3 (20-55)||(38774266-38774301)
chr3 (131-222)||(45684759-45684850)
chr3 (145-227)||(12341716-12341798)
chr3 (129-227)||(48569500-48569598)
chr3 (87-204)||(35537307-35537424)
chr3 (79-227)||(962624-962772)
chr3 (131-227)||(10868186-10868282)
chr3 (123-195)||(52907708-52907780)
chr3 (77-164)||(48930255-48930342)
chr3 (93-174)||(19875788-19875869)
chr3 (114-211)||(31675497-31675594)
chr3 (114-211)||(31920828-31920925)
chr3 (143-195)||(18381653-18381705)
[»] chr7 (32 HSPs)
chr7 (87-318)||(20918499-20918729)
chr7 (117-297)||(23811557-23811737)
chr7 (87-269)||(19544821-19545003)
chr7 (114-204)||(23054455-23054545)
chr7 (79-255)||(18671701-18671877)
chr7 (123-199)||(4344393-4344469)
chr7 (79-243)||(17056060-17056224)
chr7 (114-198)||(20349529-20349613)
chr7 (87-227)||(34104016-34104156)
chr7 (89-251)||(11341337-11341500)
chr7 (88-243)||(13553629-13553784)
chr7 (154-250)||(18768014-18768110)
chr7 (126-315)||(45993153-45993342)
chr7 (155-243)||(5327370-5327458)
chr7 (79-162)||(25018844-25018927)
chr7 (154-256)||(34457590-34457692)
chr7 (155-258)||(36227580-36227683)
chr7 (155-222)||(41340140-41340207)
chr7 (123-189)||(29916671-29916737)
chr7 (144-222)||(33821025-33821103)
chr7 (114-211)||(39658864-39658962)
chr7 (114-195)||(12308615-12308696)
chr7 (144-229)||(32815774-32815859)
chr7 (88-180)||(6335912-6336004)
chr7 (87-183)||(17504064-17504160)
chr7 (87-183)||(17549054-17549150)
chr7 (276-315)||(6335777-6335816)
chr7 (93-219)||(27218591-27218717)
chr7 (152-221)||(19735122-19735191)
chr7 (138-227)||(32482470-32482559)
chr7 (114-198)||(8752886-8752970)
chr7 (123-159)||(22819246-22819282)
[»] chr8 (28 HSPs)
chr8 (167-318)||(26774617-26774768)
chr8 (118-318)||(18187716-18187915)
chr8 (123-312)||(8902402-8902591)
chr8 (107-312)||(16048292-16048498)
chr8 (123-318)||(36025096-36025291)
chr8 (154-258)||(23942693-23942797)
chr8 (79-311)||(28992606-28992838)
chr8 (114-242)||(15439683-15439811)
chr8 (114-242)||(15530987-15531115)
chr8 (87-211)||(25193627-25193751)
chr8 (79-219)||(37165590-37165730)
chr8 (123-318)||(12341142-12341337)
chr8 (145-256)||(20824896-20825007)
chr8 (145-315)||(5585286-5585456)
chr8 (152-243)||(24794350-24794441)
chr8 (79-222)||(36492912-36493055)
chr8 (126-312)||(4987441-4987627)
chr8 (129-219)||(27288657-27288747)
chr8 (124-222)||(29721376-29721474)
chr8 (146-227)||(17700078-17700159)
chr8 (152-240)||(43249252-43249340)
chr8 (116-210)||(4992175-4992269)
chr8 (152-243)||(11393793-11393884)
chr8 (79-150)||(42649750-42649821)
chr8 (154-213)||(44082487-44082546)
chr8 (170-256)||(37434391-37434477)
chr8 (129-221)||(13878954-13879046)
chr8 (143-227)||(25090982-25091066)
[»] chr5 (31 HSPs)
chr5 (114-313)||(26262251-26262450)
chr5 (123-303)||(26262816-26262996)
chr5 (81-259)||(380434-380612)
chr5 (123-315)||(26261690-26261885)
chr5 (123-313)||(35637710-35637899)
chr5 (114-243)||(26263431-26263560)
chr5 (87-198)||(19838156-19838267)
chr5 (79-222)||(22094716-22094859)
chr5 (114-227)||(23923452-23923564)
chr5 (143-315)||(22437811-22437983)
chr5 (168-250)||(38358087-38358169)
chr5 (114-228)||(476779-476893)
chr5 (149-198)||(31864835-31864884)
chr5 (145-224)||(8299646-8299725)
chr5 (145-227)||(10780798-10780880)
chr5 (152-198)||(31864393-31864439)
chr5 (149-315)||(34481549-34481715)
chr5 (140-204)||(588099-588163)
chr5 (79-163)||(41590627-41590711)
chr5 (145-224)||(25856903-25856982)
chr5 (95-198)||(29572362-29572465)
chr5 (95-198)||(29573739-29573842)
chr5 (95-198)||(29575116-29575219)
chr5 (95-198)||(29576493-29576596)
chr5 (95-198)||(29577870-29577973)
chr5 (95-198)||(29579247-29579350)
chr5 (176-227)||(33170286-33170337)
chr5 (79-164)||(4297833-4297918)
chr5 (154-243)||(35122151-35122240)
chr5 (79-227)||(42928662-42928810)
chr5 (129-221)||(27796065-27796157)
[»] chr1 (20 HSPs)
chr1 (109-258)||(27393379-27393528)
chr1 (122-242)||(20987729-20987849)
chr1 (149-315)||(32352683-32352849)
chr1 (123-243)||(33142658-33142778)
chr1 (79-211)||(52692002-52692134)
chr1 (79-314)||(25504368-25504603)
chr1 (79-318)||(38070363-38070601)
chr1 (79-229)||(21405368-21405518)
chr1 (114-318)||(3544471-3544675)
chr1 (127-219)||(13867302-13867394)
chr1 (79-243)||(22191227-22191391)
chr1 (127-318)||(45795854-45796045)
chr1 (79-229)||(3074276-3074426)
chr1 (93-198)||(28358435-28358540)
chr1 (154-255)||(34853081-34853182)
chr1 (114-222)||(1248052-1248160)
chr1 (153-309)||(20796262-20796418)
chr1 (114-166)||(25252182-25252234)
chr1 (123-189)||(19042671-19042737)
chr1 (171-315)||(7396095-7396239)
[»] chr6 (29 HSPs)
chr6 (114-318)||(1104317-1104521)
chr6 (126-318)||(15987880-15988072)
chr6 (88-318)||(26514264-26514494)
chr6 (79-315)||(502905-503141)
chr6 (79-245)||(29056050-29056216)
chr6 (114-195)||(10919957-10920038)
chr6 (125-314)||(15511195-15511383)
chr6 (87-243)||(13086078-13086234)
chr6 (169-258)||(21549469-21549558)
chr6 (79-317)||(32186214-32186452)
chr6 (114-211)||(25350788-25350885)
chr6 (143-224)||(28575925-28576005)
chr6 (126-315)||(33640495-33640684)
chr6 (79-182)||(18588880-18588983)
chr6 (79-311)||(11469100-11469331)
chr6 (123-184)||(34180499-34180560)
chr6 (114-318)||(14843507-14843711)
chr6 (125-228)||(12107091-12107194)
chr6 (145-224)||(17577182-17577261)
chr6 (145-256)||(17605766-17605877)
chr6 (79-222)||(19256171-19256314)
chr6 (154-256)||(23065478-23065580)
chr6 (79-164)||(10362664-10362749)
chr6 (93-174)||(19350489-19350570)
chr6 (79-183)||(7956176-7956279)
chr6 (124-219)||(14551979-14552073)
chr6 (149-315)||(15674430-15674596)
chr6 (100-174)||(29976522-29976596)
chr6 (149-222)||(23346933-23347006)
[»] scaffold0026 (1 HSPs)
scaffold0026 (76-298)||(67608-67830)
[»] scaffold0131 (1 HSPs)
scaffold0131 (140-315)||(3929-4104)
[»] scaffold0113 (1 HSPs)
scaffold0113 (125-204)||(36081-36160)
[»] scaffold0002 (2 HSPs)
scaffold0002 (140-315)||(327508-327683)
scaffold0002 (140-315)||(312054-312229)
[»] scaffold1350 (1 HSPs)
scaffold1350 (168-312)||(164-308)
[»] scaffold0029 (1 HSPs)
scaffold0029 (140-315)||(134227-134402)
[»] scaffold0189 (1 HSPs)
scaffold0189 (79-189)||(6619-6729)
[»] scaffold0024 (1 HSPs)
scaffold0024 (90-159)||(86730-86799)
[»] scaffold0043 (1 HSPs)
scaffold0043 (114-318)||(33979-34183)
[»] scaffold0036 (1 HSPs)
scaffold0036 (171-243)||(3024-3096)


Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 14 - 318
Target Start/End: Original strand, 2365472 - 2365776
Alignment:
Q  14 agcacagacaagacaaaaacagatgttgagtagtctctaaccacccacctccttcaatgccaccaccaccatgaagaaccactccgacccccatccttcg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2365472 agcacagacaagacaaaaacagatgttgagtagtctctaaccacccacctccttcaatgccaccaccaccatgaagaaccactccgacccccatccttca 2365571  T
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365572 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 2365671  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365672 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 2365771  T
Q  314 cctcc 318  Q
    |||||    
T  2365772 cctcc 2365776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 9777909 - 9778067
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||| ||||||| |||||| || || |||||||  ||||||||| |||||| || ||||||||||||||||||| ||  ||| |||||||||  | |||    
T  9777909 aagaaacactccggcccccaaccgtcaacctcccatcctcctcactataacgcgctaccaacaccctataccatatactacctttatcaactagtaacct 9778008  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaac 245  Q
    ||| |||||||||||||||  || |||||||||||| || |||  ||| ||||||||||    
T  9778009 ccaacaccatttttctaattgagaaatattaaactcccttatcctcctcacccccaaac 9778067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 312
Target Start/End: Complemental strand, 55725315 - 55725082
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||||| |||||||||| | | |  ||  ||||| ||||||| | ||| |||||||||||||||||||| ||  ||||||| |||    
T  55725315 ccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccatctctatctact 55725216  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    |||| |||||| ||||||||  |||| |||||||  ||||||||||||| |  |||||| ||||| | ||||| |||| |    ||||| | |   ||||    
T  55725215 aacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattcc 55725116  T
Q  279 aaccaatccaagaaattttcctatgttcctcact 312  Q
    ||||||||||||||||||| || | |||||||||    
T  55725115 aaccaatccaagaaatttttcttttttcctcact 55725082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 8935605 - 8935748
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||||| |||||||||| | |||||||   | |||| ||||||||||| || || || |||||||| ||||| || ||||| |||    
T  8935605 ccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgagcgactaaaactctataccaaaaaccacccctatccact 8935704  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||    
T  8935705 aacatcctccaacaccatttccctagtaaggcaatattaaactc 8935748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 315
Target Start/End: Original strand, 48805517 - 48805745
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||||||||||| | ||||  || | |||||||  || ||||||| |||||||    ||||||||||||||| | ||||||||| |||||||| | |||    
T  48805517 aagaaccactccggcacccaatctccaacctcccatccacctcaccgtaacgagttgtcaacaccctataccacatacctcctctttcaactaatagcct 48805616  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatc 286  Q
    ||| ||| | ||  |||||| ||||||||||||||||||||||  ||| | |||||||| |||||  || ||   |||||||| ||| |||||||||| |    
T  48805617 ccaacacaacttacctaatagagcaatattaaactctctcatcctcctcagccccaaacctccataatcttttaataaacaaatattattccaaccaacc 48805716  T
Q  287 caagaaattttcctatgttcctcactccc 315  Q
    || |||| ||| |||   |||||||||||    
T  48805717 catgaaacttttctaatatcctcactccc 48805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 312
Target Start/End: Complemental strand, 3129528 - 3129365
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    ||||||||||| ||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||   || ||  || |||||||||| ||    
T  3129528 accctataccacaaaccacctctatccaccaacatccgccaacaccatttccctaacaaagcattattaaactcctgcagctgtctcacccccaaacctc 3129429  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 312  Q
    ||||||||||     |||||||| ||||||| || ||||||  |||||||||||| ||||||||    
T  3129428 catgctcctttttggaacaaacagttttccatcctatccaactaattttcctatgatcctcact 3129365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 2072079 - 2072211
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||| ||||||| |||||| |||   |||||| | ||||||||||||| |  || |||| |||||||||||| |  ||||||||||| || ||||||      
T  2072079 aagaaacactccgtcccccaacctctaacctccttgcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatctg 2072178  T
Q  187 ccatcaccatttttctaataaagcaatattaaa 219  Q
    ||||||||||||  |||||||||||||||||||    
T  2072179 ccatcaccatttacctaataaagcaatattaaa 2072211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 4551381 - 4551330
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 174  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4551381 cctccacaccataacgagcaaccaacaccctataccaaaaacctcctctatc 4551330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 23873015 - 23872849
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    |||| |||||| ||||| |||||||| || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  23873015 acccgataccacaaaccacctctatctaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgtacccccaaaccgc 23872916  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||||||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  23872915 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc 23872849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 19115019 - 19115110
Alignment:
Q  131 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| || || || |||||||| || || || ||||| ||||||| |||||| ||||||||  ||||||||||||||||||||||    
T  19115019 ccataacgagcgactaaaactctataccaaaatccacccctatccactaacaacctccaacaccatttccctaataaagcaatattaaactc 19115110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 276
Target Start/End: Complemental strand, 55464435 - 55464285
Alignment:
Q  126 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 225  Q
    ||||||| || ||||||||||  ||||||||||| ||||| |||||||| ||||||| |||||| ||| ||||  |||| ||  || | |||||||| ||    
T  55464435 cctcaccgtaccgagcaaccagtaccctataccacaaaccacctctatctactaacaacctccaacactatttacctaaaaatccagtgttaaactccct 55464336  T
Q  226 catctacctaacccccaaacttccatgctccttagctaaacaaacattttt 276  Q
    ||||| |||||||| ||  | ||||  || |||  ||||||||||||||||    
T  55464335 catcttcctaaccctcatccctccaaacttctttcctaaacaaacattttt 55464285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 42953041 - 42952950
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaa 243  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  42953041 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-cctaacccccaa 42952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 53810448 - 53810548
Alignment:
Q  155 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgct 254  Q
    ||||| |||||| ||||||| |||||||||||||| ||||||||   || |||| |||||||||||||  |||  | ||||||| |||||| ||||||||    
T  53810448 taccacaaaccttctctatcgactaacatcctccaacaccatttacatagtaaaacaatattaaactccttcaatttcctaaccaccaaacctccatgct 53810547  T
Q  255 c 255  Q
    |    
T  53810548 c 53810548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 23657828 - 23657971
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| ||| || |||||||||| | |||||||   | |||| | |||||| || || || || |||||||| ||||| || ||||| |||    
T  23657828 ccaccaagaagaacaacttcggcccccatcctccaacctcccacacacctcgctataacgggcgactaaaactctataccaaaaaccacccctatccact 23657927  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||||||| || ||||||||  ||| ||| ||||||||||||||    
T  23657928 aacatccttcaacaccatttccctagtaaggcaatattaaactc 23657971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 29553341 - 29553238
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||||||||||| |||||||||| | |||||||     ||||||||||||| |  || || || |||||||| ||||| |||||||| |||||||||||    
T  29553341 aagaaccactccggcccccatcctccaacctcccacaaacctcaccataacgggtgactaaaactctataccaaaaaccacctctatccactaacatcct 29553242  T
Q  187 ccat 190  Q
    ||||    
T  29553241 ccat 29553238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 258
Target Start/End: Original strand, 7099022 - 7099192
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 187  Q
    |||||||||||| |||||||||| | ||||| |  ||||||||||||| | ||| | ||| |||| |||||| |||||  ||| |||||||||||  |||    
T  7099022 agaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaaccctctcgatcaactaacaaactc 7099121  T
Q  188 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcctt 258  Q
    || ||| | ||| | || || ||   ||||||||| |||| || |||||| ||||||| ||||| ||||||    
T  7099122 caacacaactttcccaacaacgcctcattaaactccctcaactgcctaacacccaaacctccatactcctt 7099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 315
Target Start/End: Original strand, 20675623 - 20675789
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    ||||||||||| ||||| ||||| || || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  20675623 accctataccacaaaccacctctgtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccac 20675722  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||  ||| ||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  20675723 caaactctttttttaaacaaacagtttgccaacataaccaagaaattttcctattatcctcactccc 20675789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 26694548 - 26694602
Alignment:
Q  168 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  26694548 ctctatccactaacatcctccaacaccatttacctagtaaagcaatattaaactc 26694602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 54482768 - 54482620
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| ||||||||||||||||| | | |  ||  |  || ||||||| | ||| ||||||||||||  |||||| ||  |||||||||||    
T  54482768 ccaccacgaagaacaactccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccataacccctctctatcaact 54482669  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    |||| || ||| ||||||||  |||  |||||||| |||||||| ||||    
T  54482668 aacaaccgccaacaccatttccctagcaaagcaatgttaaactcgctca 54482620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 9690962 - 9691072
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 187  Q
    |||| ||||||| |||||| ||| | |||||||  ||||||||||||| | ||| || | |||||||||||| || || | |||||| || |||| ||||    
T  9690962 agaaacactccggcccccaacctccaacctcccagcctcctcaccatatctagctactagcaccctataccaaaacccacatctatccaccaacaacctc 9691061  T
Q  188 catcaccattt 198  Q
    || ||||||||    
T  9691062 caacaccattt 9691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 19648306 - 19648376
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||    
T  19648306 ctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaacattaaactc 19648376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 54685150 - 54685260
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 187  Q
    |||||||||| | |||||||||| | |||||||  |   | ||||||| | |||||||||||||  ||||||||| |||| |||||||||||| |  |||    
T  54685150 agaaccactctggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacctgataccataaccctcttctatcaactaataatctc 54685249  T
Q  188 catcaccattt 198  Q
    || ||||||||    
T  54685250 caacaccattt 54685260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 19648422 - 19648462
Alignment:
Q  275 ttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  19648422 ttccaacctatccaagacattttcctatgatcctcactccc 19648462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 38445613 - 38445661
Alignment:
Q  122 acctcctcaccataacgagcaaccaacaccctataccataaacctcctc 170  Q
    |||||||||||||||||| | ||||||||||| ||| | ||||||||||    
T  38445613 acctcctcaccataacgaactaccaacaccctgtacaacaaacctcctc 38445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 76 - 287
Target Start/End: Original strand, 20004486 - 20004698
Alignment:
Q  76 ccaccaccatgaagaaccactccgaccccc-atccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 174  Q
    ||||||||| ||||||| ||||| |||||| ||||| | |||||||||| |||||||| |||| ||| ||||| ||||||||||| ||| |||| |||||    
T  20004486 ccaccaccacgaagaacaactccaaccccccatcctccaacctccctacatcctcaccgtaaccagccaccaataccctataccacaaatctcccctatc 20004585  T
Q  175 aactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacattt 274  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||||| ||||||| |||||||||||||| |||||| |||||| ||||||||||||||    
T  20004586 aactaacatcctccaacaccatttttctaacaaagcagtgttaaactccctcatcttcctaacccccaaacctccatgatccttatctaaacaaacattt 20004685  T
Q  275 ttccaaccaatcc 287  Q
    |||||| ||||||    
T  20004686 ttccaaacaatcc 20004698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 92 - 317
Target Start/End: Original strand, 32191609 - 32191825
Alignment:
Q  92 ccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatc 191  Q
    |||||||| |||||||||| | ||||||||||||| |||||||||| ||| | ||| | |||||| |  ||| |||||||||||| ||||||||| || |    
T  32191609 ccactccggcccccatcctccaacctccctacctcatcaccataacaagccatcaatatcctatatcgcaaatctcctctatcaattaacatccttcagc 32191708  T
Q  192 accatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaaga 291  Q
    |||||||| |||         | |||||||| ||||| |  ||||||| ||||| ||||| ||||||| |||||||||||| |||||||||||| || ||    
T  32191709 accattttccta---------tgttaaactccctcatttgtctaaccctcaaacctccatactccttatctaaacaaacatgtttccaaccaattcatga 32191799  T
Q  292 aattttcctatgttcctcactccctc 317  Q
    ||||||| ||||||||||||||||||    
T  32191800 aattttcatatgttcctcactccctc 32191825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 256
Target Start/End: Original strand, 36804725 - 36804827
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| |||||| |||| || |||||||||||||| ||||||||| ||| ||||||||||||||||||| ||| || |||||||||||| | |||||||    
T  36804725 ataccacaaaccttctctctctactaacatcctccaacaccattttcctagtaaagcaatattaaactctttcaacttcctaacccccaaccatccatgc 36804824  T
Q  254 tcc 256  Q
    |||    
T  36804825 tcc 36804827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 297
Target Start/End: Original strand, 35488443 - 35488586
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| || ||| ||||||||||||||| |||||| ||||||||  ||| |||||||| |||||||||  ||| || |||||||||||||| |||||||    
T  35488443 ataccacaacccttctctatcaactaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctaacccccaaacctccatgc 35488542  T
Q  254 tccttagctaaacaaacatttttccaaccaatccaagaaatttt 297  Q
    ||| |     |||| ||| | |||||||| ||||||||||||||    
T  35488543 tccattttagaacacacagtattccaacctatccaagaaatttt 35488586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 315
Target Start/End: Complemental strand, 11234026 - 11233863
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccat 251  Q
    |||||||| |||||| ||||||| || |||||| |||| ||||||||  |||| ||||||| ||||||||| |||| || |||||||||||| | ||||     
T  11234026 ctataccacaaacctactctatctaccaacatcgtccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctccag 11233927  T
Q  252 gctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
     |||||| |   |||| | | | |||||||| ||||||| |||||||| | | |||||||||||    
T  11233926 actcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtcctcactccc 11233863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 312
Target Start/End: Original strand, 12646116 - 12646285
Alignment:
Q  143 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccccca 242  Q
    ||||||||||||||||| || ||  ||||||| ||||||| |||||| ||||||||| |||| ||| |||  ||||||||||||| |  |||||| ||||    
T  12646116 accaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagttaaactctctcaacctcctaacaccca 12646215  T
Q  243 aacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 312  Q
    | | ||||| |||| |    ||||| | |   ||||||||||||||||||||||| || | |||||||||    
T  12646216 accctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttttcttttttcctcact 12646285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 9409673 - 9409736
Alignment:
Q  180 acatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    ||||| |||| ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  9409673 acatcttccaacaccacttttctaataaagcaatgttaaactctcttatcttcctaacccccaa 9409736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 8065795 - 8065691
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| || ||| ||||||||||||||| |||||| || |||||  ||| |||||||| ||||||||   ||| || ||| |||||||||| |||||||    
T  8065795 ataccacaacccttctctatcaactaacaacctccaacatcatttacctagtaaagcaacattaaacttcttcaacttcctgacccccaaacctccatgc 8065696  T
Q  254 tcctt 258  Q
    |||||    
T  8065695 tcctt 8065691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 315
Target Start/End: Original strand, 13550709 - 13550884
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacc 238  Q
    ||||| || ||||||||||| ||| | ||||||||||| |||| |||||| ||||||||  |||| || || |||||||||||  || |||| ||| |||    
T  13550709 gcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatct-cctcacc 13550807  T
Q  239 cccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||||  |||  ||||||   |||||||||| ||| |||||  | |||||| ||||||||||  |||||||||||    
T  13550808 cccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctcactccc 13550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 315
Target Start/End: Original strand, 13551162 - 13551337
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacc 238  Q
    ||||| || ||||||||||| ||| | ||||||||||| |||| |||||| ||||||||  |||| || || |||||||||||  || |||| ||| |||    
T  13551162 gcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatct-cctcacc 13551260  T
Q  239 cccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||||  |||  ||||||   |||||||||| ||| |||||  | |||||| ||||||||||  |||||||||||    
T  13551261 cccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctcactccc 13551337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 28400107 - 28400016
Alignment:
Q  131 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| || || |||  |||||| |  ||| ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  28400107 ccataacgagcgactaaaacctgataccacatcccttctctatcgactaacatcctccaacaccatttacctagtaaagcaatattaaactc 28400016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 43310790 - 43310875
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||| |||||||||||||| |||||| ||| | |||||||  ||||||| ||||| |  || ||||||||||||||||| ||||    
T  43310790 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaac 43310875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 9668607 - 9668451
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    |||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| || ||| ||||||| || ||||||||    
T  9668607 aagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcct 9668508  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    ||| ||| ||||  |||| |||||||  |||||||| |||| |  ||||||||||||    
T  9668507 ccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaa 9668451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 15018260 - 15018351
Alignment:
Q  131 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| || || || |||||||| || || || ||||| ||| ||| |||||| ||||||||  ||||||| ||||||||||||||    
T  15018260 ccataacgagcgactaaaactctataccaaaatccacccctatccactgacaacctccaacaccatttccctaataaggcaatattaaactc 15018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 28598519 - 28598598
Alignment:
Q  124 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttcta 203  Q
    |||||||| ||||||||| ||||||||  ||||  |||| || |||||||| || ||||| ||||| |||||||||||||    
T  28598519 ctcctcactataacgagctaccaacactttatattataatccccctctatccaccaacatactccaacaccatttttcta 28598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 22724974 - 22724908
Alignment:
Q  153 tataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 219  Q
    ||||||| ||||| || ||||| |||||||||||||| ||||||||| ||| ||| |||| ||||||    
T  22724974 tataccaaaaaccacccctatccactaacatcctccaacaccattttcctagtaaggcaacattaaa 22724908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 37445621 - 37445699
Alignment:
Q  76 ccaccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacacccta 154  Q
    ||||||||| ||||||| |||||| |||||||||| | ||||||   ||||| ||||||| | ||| ||||||||||||    
T  37445621 ccaccaccacgaagaacaactccggcccccatcctccaacctcctgtcctccgcaccatacctagccaccaacacccta 37445699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 26146746 - 26146831
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||| ||| |||||||||| |||||| ||| | |||||||  ||||||| ||||| |  || ||||||||||||||||| ||||    
T  26146746 ccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaac 26146831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 33583931 - 33583798
Alignment:
Q  184 cctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaacca 283  Q
    |||||| ||||||||   ||| ||||| ||||||||||| |||| || ||| |||||||| | ||||| ||||||   ||||||||||    ||||| ||    
T  33583931 cctccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatactccttttgtaaacaaacagagctccaagca 33583832  T
Q  284 atccaagaaattttcctatgttcctcactccctc 317  Q
    ||||| ||||||||||| |  ||||||| |||||    
T  33583831 atccaggaaattttcctgttatcctcacaccctc 33583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 79 - 316
Target Start/End: Complemental strand, 5342821 - 5342584
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||||||||||| |||| ||||| | ||||| ||||||||| | |||||||||| || || || |||||||||||||||| ||||||||||    
T  5342821 ccaccacgaagaaccactccggcccctatcctccaacctctctacctccttaacataacgagccacaaatacgctataccataaacctcttctatcaact 5342722  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    ||||| ||||  | ||||||| |||| |||||||| |||||| | ||||||| || ||||||||||| | |||||||||||  |||||||  |||||| |    
T  5342721 aacattctcctactccattttcctaacaaagcaatgttaaacgccctcatctgcccaacccccaaaccttcatgctccttatataaacaactattttttc 5342622  T
Q  279 aaccaatccaagaaattttcctatgttcctcactccct 316  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  5342621 aaccaatccaagaaattttcatatgttcctcagtccct 5342584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 38774893 - 38774998
Alignment:
Q  169 tctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaa 268  Q
    ||||||||||||||||||||| |||||||||||||| |||||| | |||||||| ||||||  |||||||||||||| ||||||||||||| ||||||||    
T  38774893 tctatcaactaacatcctccagcaccatttttctaacaaagcagtgttaaactccctcatcgtcctaacccccaaacctccatgctccttatctaaacaa 38774992  T
Q  269 acattt 274  Q
    ||||||    
T  38774993 acattt 38774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 15481292 - 15481188
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| || ||| |||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  15481292 ataccacaacccttctctgtcaactaacatcctccaacaccatttacctaataaagcaatattaaactccttcaacttcctaacccccaaacctccatgc 15481193  T
Q  254 tcctt 258  Q
    |||||    
T  15481192 tcctt 15481188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 24926222 - 24926118
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| |||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||| ||| || |||||||| ||| | |||||||    
T  24926222 ataccacaaaccttctctatccactaacatcctccaacaccatttttctagtaaggcaatattaaactctttcaacttcctaaccctcaaccctccatgc 24926123  T
Q  254 tcctt 258  Q
    |||||    
T  24926122 tcctt 24926118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 25024445 - 25024333
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    |||||| ||||||||||||| ||  | |||||||| ||||||||||||| | |||  |||||||||||||||| |||||  ||||||| |||||||||||    
T  25024445 aagaacaactccgacccccaaccgccaacctccctgcctcctcaccatatctagcttccaacaccctataccaaaaaccatctctatccactaacatcct 25024346  T
Q  187 ccatcaccatttt 199  Q
    ||| |||||||||    
T  25024345 ccaacaccatttt 25024333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 36709516 - 36709620
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| || ||| |||| ||||||||||||||||| ||||||||  ||| ||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  36709516 ataccacaacccttctctgtcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaacttcctaacccccaaacctccatgc 36709615  T
Q  254 tcctt 258  Q
    |||||    
T  36709616 tcctt 36709620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 318
Target Start/End: Complemental strand, 40513285 - 40513094
Alignment:
Q  127 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc 226  Q
    ||||||||| ||||| ||||  ||||||||||||||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   |    
T  40513285 ctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaaatcctgc 40513186  T
Q  227 atctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    | || ||| ||||||||||  |||| |||||||  ||| ||||||    ||||| | | ||| ||||||||||| | |||||||||||||||    
T  40513185 aacttcctcacccccaaacccccatactccttacgtaagcaaacagagctccaagctacccaggaaattttcctgttttcctcactccctcc 40513094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 44888435 - 44888599
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||||||| || ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  44888435 ccaccacgaagaaacactccgaccctcaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 44888534  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  44888535 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 44888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 53941869 - 53941977
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||  ||||||||||||| || || ||||||||| ||||||| || ||  ||||||| || ||||||||||| ||||||||| |||||||||||      
T  53941869 acctcccagcctcctcaccataccgcgccaccaacaccttataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagcata 53941968  T
Q  214 attaaactc 222  Q
    |||||||||    
T  53941969 attaaactc 53941977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 9510326 - 9510431
Alignment:
Q  122 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    |||||||||||||| |  ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||| ||||| ||| |||| | ||  ||||||||||    
T  9510326 acctcctcaccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaact 9510425  T
Q  222 ctctca 227  Q
    | ||||    
T  9510426 ccctca 9510431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 9518301 - 9518406
Alignment:
Q  122 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    |||||||||||||| |  ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||| ||||| ||| |||| | ||  ||||||||||    
T  9518301 acctcctcaccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaact 9518400  T
Q  222 ctctca 227  Q
    | ||||    
T  9518401 ccctca 9518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 52250733 - 52250648
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||| |||||||||||||| |||||| ||| | |||||||  ||||||||||||| |  || ||||||||||||||||||||||    
T  52250733 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccataaac 52250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 318
Target Start/End: Original strand, 55367155 - 55367379
Alignment:
Q  93 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 192  Q
    ||||||| |||||  ||| | ||||| || ||||||||||||| |  || | ||| ||| ||||||| || || ||||||||||||||||||||||| ||    
T  55367155 cactccggccccctacctccaacctctctgcctcctcaccatatctcgctaacaaaaccttataccacaacccacctctatcaactaacatcctccaaca 55367254  T
Q  193 ccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaa 292  Q
    ||||||| |||| || |||| |||||| ||  ||| || ||| |||||| |||  |||| ||||||   | |||||| ||  |||||| | ||||| |||    
T  55367255 ccattttcctaacaacgcaagattaaattccttcaacttcctcaccccc-aacccccatactcctttcgtgaacaaatataattccaagcgatccaggaa 55367353  T
Q  293 attttcctatgttcctcactccctcc 318  Q
    |||||||| |  ||||||||||||||    
T  55367354 attttcctgttgtcctcactccctcc 55367379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 6825360 - 6825496
Alignment:
Q  86 gaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcc 185  Q
    |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| || || ||||||||||||||||||||||  |  || ||||| ||||  |    
T  6825360 gaagaacctctccggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctataccataaactactcctctcaaccaacaaac 6825459  T
Q  186 tccatcaccatttttctaataaagcaatattaaactc 222  Q
     ||| ||||||||  ||||||| ||||||||||||||    
T  6825460 gccaacaccatttgcctaataacgcaatattaaactc 6825496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 21740057 - 21739896
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 252  Q
    ||||||||||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||| |||||||| | ||||      
T  21740057 ataccataaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-ccttacccccaaccctccaga 21739959  T
Q  253 ctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||| |   |||| | | | |||||||| ||||||| |||||||| | | |||||||||||    
T  21739958 ctcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtcctcactccc 21739896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 22734266 - 22734096
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 244  Q
    ||||||||||||| | | ||  |||||||| ||||||| |  ||| ||||||||  ||| ||||||||||||||| || || | || ||| ||| ||||     
T  22734266 caacaccctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaat 22734167  T
Q  245 cttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    | ||||| |||||||   ||||||||| | |||||||  | |||||| ||||||||||| |||||||||||    
T  22734166 cctccatactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactccc 22734096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 299
Target Start/End: Complemental strand, 14864074 - 14863854
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||||| |||||  ||| | |||||||  || |||| |||||||  || || |  || ||||||||||||||| || |||| ||     
T  14864074 ccaccaagaagaacaactccggccccccacctccaacctcccacccacctcgccataacaggcgacaagaacactataccataaacctactttatcgacc 14863975  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatgctccttagctaaacaaacatttttc 277  Q
    ||||||||||| ||||||||  |||| || |||| ||||||||| ||| |||| |||||||||||| | ||||  ||||||||   |||| | | | |||    
T  14863974 aacatcctccaacaccatttacctaacaatgcaaaattaaactccctcaatct-cctaacccccaaccctccagactccttagaagaacataaagtattc 14863876  T
Q  278 caaccaatccaagaaattttcc 299  Q
    ||||| ||||||| ||||||||    
T  14863875 caacctatccaagtaattttcc 14863854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 318
Target Start/End: Original strand, 34829994 - 34830163
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    |||||||||||||| ||  || |||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   || || ||| |||||||| | ||    
T  34829994 accctataccataacccaactatatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctcacccccaaccctc 34830093  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    ||| |||||||  ||||||||||    ||||| ||||||| ||||||||||| |  ||||||||||||||    
T  34830094 catactccttacgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccctcc 34830163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 42674973 - 42674869
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 252  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| |||| |||||||||||||  || |||| ||| ||| |||||| ||||||    
T  42674973 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaaacaatattaaactccttcaatct-cctcacctccaaacctccatg 42674875  T
Q  253 ctcctt 258  Q
    ||||||    
T  42674874 ctcctt 42674869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 38774266 - 38774301
Alignment:
Q  20 gacaagacaaaaacagatgttgagtagtctctaacc 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  38774266 gacaagacaaaaacagatgttgagtagtctctaacc 38774301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 45684759 - 45684850
Alignment:
Q  131 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| || || |||  |||||| |  ||| ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  45684759 ccataacgagcgactaaaacctgataccacagcccttctctatcgactaacatcctccaacaccatttacctagtaaagcaatattaaactc 45684850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 12341798 - 12341716
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  12341798 caacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 12341716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 48569598 - 48569500
Alignment:
Q  129 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||| | ||| ||||||||||||  ||| || ||  ||||||||||||||| || ||| |||||||| ||||  |||||||| |||||||||||||    
T  48569598 caccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccatttctctagcaaagcaatgttaaactctctca 48569500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 35537307 - 35537424
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||| ||||||| |||||| ||| | | |||| | ||||||||||| |   || | ||||||  |||||||| |||||||| ||||||||||| |||||    
T  35537307 aagaatcactccggcccccaacctccaatctccttgcctcctcaccacacttagaagccaacaatctataccaaaaacctccactatcaactaaaatcct 35537406  T
Q  187 ccatcaccatttttctaa 204  Q
    ||| ||||| ||||||||    
T  35537407 ccaacaccacttttctaa 35537424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 962772 - 962624
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| || |||| ||||||||||||||||| | | |  ||  || || ||||||| | ||| || |||||||||  ||| || ||  |||| || |||    
T  962772 ccaccaagatgaacaactccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacaccctacgccacaacccatctctctctact 962673  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||| ||||    
T  962672 aacaacctccaacaccattttcctaacaaagcaatattaaactccctca 962624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 10868186 - 10868282
Alignment:
Q  131 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||||||| || |  || ||||| || |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||||    
T  10868186 ccataacgagcgactagaacactatatcagaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 10868282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 52907780 - 52907708
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 195  Q
    |||||||||| ||||| || || |||||||||||||| || ||  |||||||||||||||| ||||| |||||    
T  52907780 cctcctcaccgtaacgggccactaacaccctataccacaacccctctctatcaactaacattctccaacacca 52907708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 48930255 - 48930342
Alignment:
Q  77 caccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||||| | |||||||||||  |||||| ||| | |||||||  ||||||||||||| |  || ||||| ||||||||||||||||    
T  48930255 caccaccacgcagaaccactccagcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 48930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 19875788 - 19875869
Alignment:
Q  93 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 174  Q
    ||||||| |||||| ||| | |||||| | ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  19875788 cactccggcccccaacctccaacctccttgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 19875869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 31675497 - 31675594
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 211  Q
    |||||||| ||||||||||||| |   | |||| |||||||||||| ||||| |||||||| || ||||| | ||| ||||||||  |||| ||||||    
T  31675497 acctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 31920925 - 31920828
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 211  Q
    |||||||| ||||||||||||| |   | |||| |||||||||||| ||||| |||||||| || ||||| | ||| ||||||||  |||| ||||||    
T  31920925 acctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31920828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 18381653 - 18381705
Alignment:
Q  143 accaacaccctataccataaacctcctctatcaactaacatcctccatcacca 195  Q
    ||||| |||| ||||||||| |||||||||||||| ||||| ||||| |||||    
T  18381653 accaaaacccaataccataaccctcctctatcaaccaacattctccaacacca 18381705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 318
Target Start/End: Original strand, 20918499 - 20918729
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    |||||||||||||||||||| |   | |||||||| ||| ||||||||||||||  || | |||||||||||| |||||||||||||| ||||||| |||    
T  20918499 aagaaccactccgacccccaactggcaacctccctgccttctcaccataacgagttactagcaccctataccacaaacctcctctatctactaacaacct 20918598  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatc 286  Q
    | | ||||||||| |||  |||||| | ||||||||   ||| | ||||| |||||| | || |  ||||||  |||||||||||||||||||||||||     
T  20918599 cgaacaccattttcctagcaaagcagtgttaaactcctgcattttcctaa-ccccaaccctctagactcctttcctaaacaaacatttttccaaccaatg 20918697  T
Q  287 caagaaattttcctatgttcctcactccctcc 318  Q
    ||||||||||||||||  ||||||||||||||    
T  20918698 caagaaattttcctattatcctcactccctcc 20918729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 23811557 - 23811737
Alignment:
Q  117 tccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatatt 216  Q
    ||||| |||||||||| |||||||| ||||||| ||||||||| ||||||| | | || ||||||| |||||| |||||||| ||||| |||| ||| ||    
T  23811557 tccctgcctcctcaccgtaacgagctaccaacaacctataccacaaacctcatatgtctactaacaacctccagcaccatttatctaacaaagaaatgtt 23811656  T
Q  217 aaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaatttt 297  Q
    |||||||||||||| |||||| |  || |  ||| |||| ||   |||||||||||||||||||||||||||| |||||||    
T  23811657 aaactctctcatctgcctaactcataacccgccaagctcttttcgtaaacaaacatttttccaaccaatccaataaatttt 23811737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 269
Target Start/End: Complemental strand, 19545003 - 19544821
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||||||||||| |||||| ||| | ||||| || ||||||||||||| || |   |||||||||||||||| || ||  ||||||| || |||||||     
T  19545003 aagaaccactccggcccccaacctccaacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccaccaacatccg 19544904  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaa 269  Q
    ||| ||||||||  ||||||| ||| |||||||||| |||| || ||| ||||| || | ||||| |||||||  ||||||||    
T  19544903 ccaacaccatttgcctaataaggcactattaaactccctcaactgcctgacccctaaccctccatactccttacgtaaacaaa 19544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 23054545 - 23054455
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 204  Q
    |||||||| ||||||||||||  | |||  |||||||||||||||| || |||||||||||||||||||||||| | ||||||||| ||||    
T  23054545 acctccctgcctcctcaccatgtctagccgccaacaccctataccaaaaccctcctctatcaactaacatcctctaacaccattttcctaa 23054455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 255
Target Start/End: Original strand, 18671701 - 18671877
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcct-caccataacgagcaaccaacaccctataccataaacctcctctatcaac 177  Q
    ||||||||||||| ||||||| |||||  ||| | ||||||| |||| || | ||||||||||| || || ||   |||||| || ||| ||||||||||    
T  18671701 ccaccatgaagaaacactccggccccccacctccaacctccc-acctacttcgccataacgagcgactaaaacatgataccacaaccctgctctatcaac 18671799  T
Q  178 taacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctc 255  Q
    |||||||||||| ||||||||  ||| |||||||| |||||| ||  ||| || ||||||| |||||| |||||||||    
T  18671800 taacatcctccaacaccatttacctagtaaagcaacattaaattccttcaacttcctaaccaccaaacctccatgctc 18671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 4344393 - 4344469
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttt 199  Q
    ||||||||||||||||||| || ||||||||||||||||||||   ||||||| ||| ||||||||| |||||||||    
T  4344393 cctcctcaccataacgagccactaacaccctataccataaaccatttctatcatctagcatcctccaacaccatttt 4344469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 17056060 - 17056224
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  17056060 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 17056159  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  17056160 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 17056224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 20349529 - 20349613
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccattt 198  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||| | | ||||||| || |||||| |||| ||||||||    
T  20349529 acctccctgcctcctcaccataccgagccaccaacaccctataccataacctttctctatctaccaacatcatccagcaccattt 20349613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 34104016 - 34104156
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||||||||||  |||||||||| | |||||| | |||||||||| ||||| || ||||||||||||||||| || ||  || |||| |  ||||||||    
T  34104016 aagaaccactccagcccccatcctccaacctccttgcctcctcaccgtaacgcgccaccaacaccctataccaaaacccctctttatccatcaacatcct 34104115  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||| |||||||| |||| |||  || |||||||||| ||||    
T  34104116 ccagcaccatttgtctagtaagacactattaaactccctca 34104156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 251
Target Start/End: Original strand, 11341337 - 11341500
Alignment:
Q  89 gaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcc 188  Q
    |||| |||||| |||||  ||| | |||||||| ||||||||||||| | |||| |||||||||||||||| || ||   ||||| ||| ||||||||||    
T  11341337 gaacaactccggcccccgacctccaacctccctgcctcctcaccatacctagcagccaacaccctataccaaaatccctatctataaaccaacatcctcc 11341436  T
Q  189 atcaccatttttctaataaagc-aatattaaactctctcatctacctaacccccaaacttccat 251  Q
    | ||||||||| |||| | ||| || ||||||||| |||| |  | |||||||||||| |||||    
T  11341437 aacaccattttcctaacatagctaaaattaaactccctcaaccgcgtaacccccaaacctccat 11341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 243
Target Start/End: Complemental strand, 13553784 - 13553629
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 187  Q
    ||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| || ||| ||||||| || |||||||||    
T  13553784 agaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcctc 13553685  T
Q  188 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    || |||||||| ||||| ||||||| ||||||||| |||| |  ||||||||||||    
T  13553684 caacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaa 13553629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 18768014 - 18768110
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttcca 250  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||    
T  18768014 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctcca 18768110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 315
Target Start/End: Original strand, 45993153 - 45993342
Alignment:
Q  126 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 225  Q
    |||| |||||||| || || || || |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  45993153 cctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaatgcaacattaaactcctt 45993252  T
Q  226 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| |||||||||||    
T  45993253 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcactccc 45993342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 5327370 - 5327458
Alignment:
Q  155 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||  ||| |||||||| |||||||||  ||| || |||||| |||||    
T  5327370 taccataaaccttctctatccactaacatcctccaacaccatttccctagtaaagcaagattaaactccttcaacttcctaactcccaa 5327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 25018927 - 25018844
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataa 162  Q
    |||||| ||||||||||| ||||||||| ||| | |||||||  ||||||||||||| |  || ||||||||||||||||||||    
T  25018927 ccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaacaccctataccataa 25018844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 34457692 - 34457590
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 252  Q
    |||||| || ||| |||||||||||||||||  ||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||||    
T  34457692 ataccacaacccttctctatcaactaacatcacccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctccatg 34457594  T
Q  253 ctcc 256  Q
    ||||    
T  34457593 ctcc 34457590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 36227683 - 36227580
Alignment:
Q  155 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgct 254  Q
    |||||||||||| ||||||||||||||||||||||  |||| ||  ||| |||||||| |||||||||  |||  | ||||| |||||| | ||||||||    
T  36227683 taccataaaccttctctatcaactaacatcctccaataccacttacctagtaaagcaacattaaactccttcaatttcctaaaccccaaccctccatgct 36227584  T
Q  255 cctt 258  Q
    ||||    
T  36227583 cctt 36227580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 41340140 - 41340207
Alignment:
Q  155 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||| |||||| ||||||| |||||||||||||| ||||||||  ||| |||||||| |||||||||    
T  41340140 taccacaaaccttctctatccactaacatcctccaacaccatttccctagtaaagcaaaattaaactc 41340207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 29916671 - 29916737
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcca 189  Q
    ||||||||||||||||||| ||||| ||||| |||||||| || | ||| || ||||||||||||||    
T  29916671 cctcctcaccataacgagctaccaataccctgtaccataagccccttctgtccactaacatcctcca 29916737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 33821103 - 33821025
Alignment:
Q  144 ccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||| ||||||||||| || ||  |||| || || | ||||||||| |||||||||||||||||||| |||||||||||    
T  33821103 ccaaaaccctataccagaacccatctctgtctaccagcatcctccaacaccatttttctaataaagctatattaaactc 33821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 39658962 - 39658864
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcc-tctatcaactaacatcctccatcaccatttttctaataaagca 211  Q
    |||||||  ||||||||||||| || || ||||||||||||||| | || || || |||||| || ||||||||||| ||||||||  |||||||||||    
T  39658962 acctcccagcctcctcaccataccgcgccaccaacaccctatactagaaccccccctctatccaccaacatcctccaacaccatttccctaataaagca 39658864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 12308696 - 12308615
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 195  Q
    |||||| | ||||||||||||| |  ||| |||||||||||||||| ||| |||  |||||||||| ||||||||| |||||    
T  12308696 acctccatgcctcctcaccataccttgcagccaacaccctataccaaaaatctctcctatcaactagcatcctccaacacca 12308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 32815859 - 32815774
Alignment:
Q  144 ccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 229  Q
    ||||||||||  |||| || || ||||||||  | | ||||||||| |||||||||||||| | ||||||||||||||| ||||||    
T  32815859 ccaacaccctgaaccacaacccccctctatccgccatcatcctccaacaccatttttctaaaagagcaatattaaactccctcatc 32815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 6336004 - 6335912
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaa 180  Q
    |||||||||| | |||||||||| | |||||||  |   | ||||||| | |||||||||||||| ||||||||| ||||||||||| |||||    
T  6336004 agaaccactctggcccccatcctccaacctcccatcgcgcacaccatacctagcaaccaacacccgataccataaccctcctctatctactaa 6335912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 17504160 - 17504064
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacat 183  Q
    ||||||||||||| |||||||||| | |||||||  |||||||||| || |  || |||||||| | |||||| | |||  ||||||||||||||||    
T  17504160 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacat 17504064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 17549054 - 17549150
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacat 183  Q
    ||||||||||||| |||||||||| | |||||||  |||||||||| || |  || |||||||| | |||||| | |||  ||||||||||||||||    
T  17549054 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacat 17549150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Complemental strand, 6335816 - 6335777
Alignment:
Q  276 tccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  6335816 tccaacctacccaagaaattttcctatgttcctcactccc 6335777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 27218717 - 27218591
Alignment:
Q  93 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 192  Q
    ||||||| |||||| ||  | |||||||| ||||||||||||| |  || ||||||||||||||||| || || |||||||| |  |||| || ||| ||    
T  27218717 cactccggcccccaaccgccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaatccacctctatctatcaacaaccgccaaca 27218618  T
Q  193 ccatttttctaataaagcaatattaaa 219  Q
    ||||||  |||| ||||| | ||||||    
T  27218617 ccatttacctaacaaagctaaattaaa 27218591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 19735122 - 19735191
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| || |||| ||||||||    
T  19735122 ctataccacaaacctactctatcgaccaacatcctccaacaccatttacctaacaatgcaaaattaaact 19735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 32482559 - 32482470
Alignment:
Q  138 gagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    |||| ||||||||||||| ||| |||||  || |||| |||||||||||||| ||||| ||  |||||| ||| | |||||| |||||||    
T  32482559 gagccaccaacaccctattccacaaaccctctatatctactaacatcctccaacaccacttccctaatagagccaaattaaattctctca 32482470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 8752970 - 8752886
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccattt 198  Q
    |||||||  ||||||||||||| |  || |||| |||||||||||| |  ||||||||||| || ||||||||||| ||| ||||    
T  8752970 acctcccagcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatcctccagcactattt 8752886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 22819282 - 22819246
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctatacca 159  Q
    |||||||||||||||| || |||||||||||||||||    
T  22819282 cctcctcaccataacgcgctaccaacaccctatacca 22819246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 167 - 318
Target Start/End: Complemental strand, 26774768 - 26774617
Alignment:
Q  167 cctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaac 266  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||  ||||||| ||||| |   |||||| ||||| || |||||||||| |||||     
T  26774768 cctctatcaactaacatcctccaacaccattttgctaacaaagcaatggtaaactccctcatttgtgtaaccctcaaacatctatgctccttatctaaat 26774669  T
Q  267 aaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    |||  ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  26774668 aaatgtttttccaaccaatccatgaaattttcctatgttcctcacttcctcc 26774617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 118 - 318
Target Start/End: Original strand, 18187716 - 18187915
Alignment:
Q  118 ccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatatta 217  Q
    |||||||||||||||||| | | |||||| | |||||||||| ||||| |||||||| |||||||  ||||| ||||||||  |||| |||||| | |||    
T  18187716 ccctacctcctcaccatatcaatcaaccagctccctataccacaaaccacctctatctactaacaatctccaacaccatttacctaacaaagcagtgtta 18187815  T
Q  218 aactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctc 317  Q
    ||||| ||| | | |||||||||||| | ||||  ||| ||  ||||||||||| ||||||||| ||||||||||||||||||||  ||||||| |||||    
T  18187816 aactccctcgtatgcctaacccccaaccctccagactcttttcctaaacaaaca-ttttccaactaatccaagaaattttcctattgtcctcacaccctc 18187914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 123 - 312
Target Start/End: Original strand, 8902402 - 8902591
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||||||||||| || |||||||||||||| || ||  |||||||||||||||||| ||| ||||||||| |||| | ||| | |||||| ||    
T  8902402 cctcctcaccataacgagccactaacaccctataccacaagccagctctatcaactaacatccgccaacaccattttcctaagagagccagattaaattc 8902501  T
Q  223 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 312  Q
    |||||||  |||||||||||||| ||| | |||||||   | ||||| | | ||||||| |||||||||  |||||||||| ||| ||||    
T  8902502 tctcatcctcctaacccccaaacctccttcctccttacggacacaaatactattccaactaatccaagatgttttcctatggtccgcact 8902591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 312
Target Start/End: Complemental strand, 16048498 - 16048292
Alignment:
Q  107 tccttcgacctccctacc-tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaat 205  Q
    |||||| ||||||| ||| ||| | |||||||| || |||| ||||||| | || ||||| |||||||| |  ||||||||||| ||||||||  ||||     
T  16048498 tccttcaacctccccaccctccactccataacgggccaccaccaccctaaagcacaaaccccctctatccatcaacatcctccaacaccatttacctaaa 16048399  T
Q  206 aaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgtt 305  Q
    | ||| || |||||||| ||||||| ||||  |||||| | ||||| ||||||   |||||||||| |||||||| ||||||||||| ||||||||||||    
T  16048398 agagccatgttaaactccctcatctgcctagtccccaaccctccatactcctttcgtaaacaaacacttttccaaacaatccaagaagttttcctatgtt 16048299  T
Q  306 cctcact 312  Q
    |||||||    
T  16048298 cctcact 16048292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 36025096 - 36025291
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||||| |  || ||||| || ||||||||||| ||||||||||| || ||||||| ||| ||||||| | ||||||||||||||||||| ||    
T  36025096 cctcctcaccatatctcgccaccaaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcctaataaagcaatattaaattc 36025195  T
Q  223 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
     |||| || ||| |||||||| |  || |  || |||  |||||||||| |  ||||| | ||||| ||||||||||| |  ||||||||||||||    
T  36025196 actcaactgcctcacccccaatcccccctcttctttacgtaaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcactccctcc 36025291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 23942693 - 23942797
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| || ||| ||||||||||||||| |||||| ||||||||  ||| |||||||| |||||||||  ||| || ||| |||||||||| |||||||    
T  23942693 ataccacaacccttctctatcaactaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctgacccccaaacctccatgc 23942792  T
Q  254 tcctt 258  Q
    |||||    
T  23942793 tcctt 23942797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 311
Target Start/End: Complemental strand, 28992838 - 28992606
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||| | |||||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||| ||||    | |||| |||    
T  28992838 ccaccacgaagaaacactctggcccccaaccttcaacctctcatcctcctcaccataacgagctaccaacaccctataccacaaactgtttttatcgact 28992739  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    |  | |||||| |||||||| ||||| |   ||||||||||||| ||||||  |   |||||||||| || |  |||||||   | ||||| ||| ||||    
T  28992738 agtaacctccaacaccatttctctaacaggtcaatattaaactccctcatcctctgcacccccaaacctctagactccttactgacacaaatattattcc 28992639  T
Q  279 aaccaatccaagaaattttcctatgttcctcac 311  Q
    || ||| ||| || ||||||||||| |||||||    
T  28992638 aagcaacccatgagattttcctatgatcctcac 28992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 15439683 - 15439811
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||| |||||||||||||  | ||  ||||||||||||||||||||||  ||||||  || ||||||  ||| ||||||||  ||| ||| ||| |    
T  15439683 acctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcact 15439782  T
Q  214 attaaactctctcatctacctaaccccca 242  Q
    ||||||||| |||| || |||||||||||    
T  15439783 attaaactccctcaactgcctaaccccca 15439811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 15530987 - 15531115
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||| |||||||||||||  | ||  ||||||||||||||||||||||  ||||||  || ||||||  ||| ||||||||  ||| ||| ||| |    
T  15530987 acctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcact 15531086  T
Q  214 attaaactctctcatctacctaaccccca 242  Q
    ||||||||| |||| || |||||||||||    
T  15531087 attaaactccctcaactgcctaaccccca 15531115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 25193627 - 25193751
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||| ||||||| |||||  ||| | |||||||  ||||||||||||| ||  | |||||||||| |||||| || ||  ||||||| || ||||||||    
T  25193627 aagaatcactccggccccctacctccaacctcccagcctcctcaccataccgcaccaccaacacccgataccagaacccatctctatccaccaacatcct 25193726  T
Q  187 ccatcaccatttttctaataaagca 211  Q
    ||| ||||||||| |||||||||||    
T  25193727 ccagcaccattttcctaataaagca 25193751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 37165730 - 37165590
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| | |||| ||||||| |||||| ||| | ||| |||  ||||||| ||||| |  || ||||  ||||||||||| || ||||||||||| |||    
T  37165730 ccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccagtaccctataccacaagcctcctctatccact 37165631  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaa 219  Q
    ||||||||||| || || ||| |||||| ||||||||||||    
T  37165630 aacatcctccaacatcactttcctaatagagcaatattaaa 37165590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 12341142 - 12341337
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||||| |  || ||||  |||||| |||| || ||||||||||| |||||||||||||| ||||| ||| |||| ||||| |||||||| ||    
T  12341142 cctcctcaccatacctcgccaccagtaccctaaaccacaaccctcctctatccactaacatcctccaacaccactttcctaacaaagccatattaaattc 12341241  T
Q  223 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
      ||| ||  || ||||||||||  |||| ||||||   |||||| ||     ||||| ||||||| ||||||||||| |  ||||||||||||||    
T  12341242 cttcaactgtctcacccccaaacccccattctcctttcgtaaacataccgaactccaagcaatccaggaaattttcctgttatcctcactccctcc 12341337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 20824896 - 20825007
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 244  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||||| |  |||||| |||||     
T  20824896 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaac 20824995  T
Q  245 cttccatgctcc 256  Q
    | ||||| ||||    
T  20824996 cctccatactcc 20825007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 5585286 - 5585456
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 244  Q
    ||||||||||||| | | ||  |||||||| ||||||| |  ||| ||||||||  ||| ||||||||||||||| || || | || ||| ||| ||||     
T  5585286 caacaccctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaat 5585385  T
Q  245 cttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    | ||||| |||||||   ||||||||| | |||||||  | |||||| ||||||||||| |||||||||||    
T  5585386 cctccatactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactccc 5585456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 24794350 - 24794441
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaa 243  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  24794350 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-cctaacccccaa 24794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 36492912 - 36493055
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| |  || ||||||||||||||||||||||  |  || |||||     
T  36492912 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaacc 36493011  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||  | ||| ||||||||  ||||||| |||| |||||||||    
T  36493012 aacaaacgccaacaccatttgcctaataacgcaacattaaactc 36493055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 4987627 - 4987441
Alignment:
Q  126 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 225  Q
    |||| |||||||| || || || || |||||||| ||||| || | ||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  4987627 cctcgccataacgggcgactaaaactctataccaaaaaccacccccatccactaacatcctccaacaccatttccctagtaaggcaacattaaactcctt 4987528  T
Q  226 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 312  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| ||||||||    
T  4987527 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcact 4987441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 27288657 - 27288747
Alignment:
Q  129 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 219  Q
    |||||||||| | | |||||||||||||||||||||||| | | |  || || |||||||| ||||||||| |||||||||  ||||||||    
T  27288657 caccataacgggtagccaacaccctataccataaacctcatatgttcaccaatatcctccaacaccattttcctaataaagatatattaaa 27288747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 29721474 - 29721376
Alignment:
Q  124 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||||||||||| |  || ||||| ||||||||||| || || |||  |||||||||||||||||| ||||||||  |||| || |||| |||||||||    
T  29721474 ctcctcaccatatctcgccaccaaaaccctataccacaacccaccttgatcaactaacatcctccaacaccatttgcctaacaacgcaagattaaactc 29721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 17700078 - 17700159
Alignment:
Q  146 aacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    |||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  17700078 aacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 17700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 43249340 - 43249252
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccc 240  Q
    |||||||| || ||| ||||||| || || |||||||| ||||||||  |||| ||||||| |||||||||||||| |  |||||||||    
T  43249340 ctataccacaaccctactctatctaccaatatcctccaacaccatttacctaacaaagcaaaattaaactctctcaacctcctaacccc 43249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 4992269 - 4992175
Alignment:
Q  116 ctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcc-tctatcaactaacatcctccatcaccatttttctaataaagc 210  Q
    |||||||| ||||||||||| | ||||||||| ||||||||||| |||||||| ||| || | ||  | |||||| |||||||||||||| |||||    
T  4992269 ctccctacttcctcaccatacctagcaaccaagaccctatacca-aaacctccttctctccattagtaacctccaacaccatttttctaacaaagc 4992175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 11393884 - 11393793
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    |||||||| |||||| ||||||| || |||| |||||| ||||||||  |||| || |||| ||||||||| ||||   |||||||||||||    
T  11393884 ctataccacaaacctactctatcgaccaacaacctccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaa 11393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 42649750 - 42649821
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacac 150  Q
    |||||| | |||||||||||| |||||||| ||| |||||||  ||||||||||||| | ||| ||||||||    
T  42649750 ccaccacgtagaaccactccggcccccatctttcaacctcccgtcctcctcaccatatctagccaccaacac 42649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 44082546 - 44082487
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| |||||||||    
T  44082546 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaagcaat 44082487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 37434477 - 37434391
Alignment:
Q  170 ctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcc 256  Q
    ||||||||||||| || ||| ||||||||| | || |||||||| ||||||||||||| |  |||||| ||||| | ||||| ||||    
T  37434477 ctatcaactaacagccgccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 37434391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 13879046 - 13878954
Alignment:
Q  129 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    ||||||| | ||| ||||||||||||  |||||| ||  ||||||||||||||| || ||| ||||||||  |||  |||||||| |||||||    
T  13879046 caccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 13878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 25090982 - 25091066
Alignment:
Q  143 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||||||||  ||| || ||  ||||||||||||||| || | | ||||||||  |||| |||||||| |||||||||||||    
T  25090982 accaacaccctacgccacaacccctctctatcaactaacaaccgctaacaccatttccctaacaaagcaatgttaaactctctca 25091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 313
Target Start/End: Complemental strand, 26262450 - 26262251
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||  |||||||||||||| ||||||  |||||||||||||| |||||| ||||||  |||||||||||||| ||||||||| |||| |||||| |    
T  26262450 acctcccatcctcctcaccataatgagcaagtaacaccctataccaaaaacctactctatttactaacatcctccaacaccattttcctaacaaagcagt 26262351  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
    ||||||||| |||||||  || | || ||| | | |||  |||||   ||||||||||  |||||||||||||  ||||||||||||||| || ||||||    
T  26262350 attaaactccctcatctctcttaacctcaacccttcatattcctttcttaaacaaacagctttccaaccaatcatagaaattttcctatgatcttcactc 26262251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 303
Target Start/End: Complemental strand, 26262996 - 26262816
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||||||||||||||||||||| |||||||||||| | |||||| ||||||  ||||||||||||||  |||||||| |||| ||||||  |||||||||    
T  26262996 cctcctcaccataacgagcaactaacaccctatacaaaaaacctactctatttactaacatcctccaataccattttcctaacaaagcaggattaaactc 26262897  T
Q  223 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatg 303  Q
     ||||||| ||| |||| ||| | | ||   |||||   ||||||||||  ||||||| ||||| ||||||||||||||||    
T  26262896 cctcatctcccttaccctcaacccttcacattcctttcttaaacaaacaactttccaaacaatcaaagaaattttcctatg 26262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 81 - 259
Target Start/End: Original strand, 380434 - 380612
Alignment:
Q  81 accatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaa 180  Q
    |||| |||||||||||||| |||||| ||| | |||||||| ||||||||||||| || ||  ||| |||||||||||| |||||  ||||||| || ||    
T  380434 accaagaagaaccactccggcccccaacctccaacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaa 380533  T
Q  181 catcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcctta 259  Q
    ||||| ||| ||||||||  ||| |||  || |||||||||| |||| || ||| |||||||||| ||||| |||||||    
T  380534 catccgccaacaccatttgcctagtaagacactattaaactccctcaactgcctgacccccaaacctccatactcctta 380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 315
Target Start/End: Complemental strand, 26261885 - 26261690
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaaca---tcctccatcaccatttttctaataaagcaatattaaa 219  Q
    |||| ||||| || |||||||| | |||||||||| | ||| ||  |||||| |||||||   |||| |||||||  ||| |||| |||||  | |||||    
T  26261885 cctcatcaccgtagcgagcaactagcaccctatacaaaaaatcttatctatccactaacaacatccttcatcaccgctttcctaacaaagcggtgttaaa 26261786  T
Q  220 ctctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||||||| ||| |||||||| | ||||| ||| ||   |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26261785 ctccctcatctgccttacccccaaccatccatactcttttcttaaacaaacagttttccaaccaatccaagaaattttcctatgatcctcactccc 26261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 313
Target Start/End: Original strand, 35637710 - 35637899
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||| ||||| |  |||||||||||| | ||||||||||||||||||||||| |||| |||||| ||||| ||| ||||||| |||| ||| |||||    
T  35637710 cctcctcgccatacctcgcaaccaacaccttgtaccataaacctcctctatcaaccaacaacctccaacaccactttcctaataatgcaaaatttaactc 35637809  T
Q  223 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
     ||||  | ||| | |||||||| ||||||||||||   |||||||| | | |||||| | ||||| || ||||||||||  |||||||||    
T  35637810 cctcaattgcctca-ccccaaacctccatgctcctttcgtaaacaaatagtattccaagcgatccatgatattttcctattatcctcactc 35637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 26263560 - 26263431
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||| ||| |||||||||||||||||||||| |||||||||||| | ||||||   ||||  |||||||| ||||| ||||||||| |||| |||||| |    
T  26263560 accttccttcctcctcaccataacgagcaactaacaccctatacgaaaaacctatcctatttactaacattctccaacaccattttcctaacaaagcagt 26263461  T
Q  214 attaaactctctcatctacctaacccccaa 243  Q
    ||||||||| |||||||  || ||||||||    
T  26263460 attaaactccctcatctcacttacccccaa 26263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 19838156 - 19838267
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    ||||||||||| | |||| | || || |||||||| | |||||| |||||||||| | ||||||| ||||||| ||||||||| |||| |||||||||||    
T  19838156 aagaaccactctgtcccctaaccatcaacctccctgcatcctcatcataacgagctaacaacaccttataccacaaacctcctttatctactaacatcct 19838255  T
Q  187 ccatcaccattt 198  Q
    ||  ||||||||    
T  19838256 cctgcaccattt 19838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 22094859 - 22094716
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| ||| || |||||||||| | |||||||     |||| ||||||||||| || || || |||||||| ||||| || ||||| |||    
T  22094859 ccaccacgaagaacaacttcggcccccatcctccaacctcccacaaacctcgccataacgagcgactaaaactctataccaaaaaccacccctatccact 22094760  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| ||||| ||  ||| ||||||||||||||||||    
T  22094759 aacatcctccaacaccacttccctagtaaagcaatattaaactc 22094716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 23923452 - 23923564
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    ||||| || ||||||||||||| | |||| |||||||| ||||||| || || ||||| ||||||||||||||||||||||||||  |||| ||||  |     
T  23923452 acctctctgcctcctcaccatacctagcagccaacacc-tataccaaaacccacctctgtcaactaacatcctccatcaccatttccctaaaaaagataa 23923550  T
Q  214 attaaactctctca 227  Q
    ||||||||| ||||    
T  23923551 attaaactccctca 23923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 315
Target Start/End: Original strand, 22437811 - 22437983
Alignment:
Q  143 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccccca 242  Q
    ||||||||||||||||| |||||  ||||||| |||||||||||||| | ||||||  |||| | ||| |||||| | ||| |||||  ||| ||||| |    
T  22437811 accaacaccctataccacaaaccatctctatctactaacatcctccagccccatttacctaaaagagctatattatattctatcatcctcctcaccccta 22437910  T
Q  243 aacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||  | |||||||    ||||||||   ||||||| |||||| ||| |||||||||| |||||||||||    
T  22437911 aacctcattcctccttacgataacaaacaaaattccaactaatccatgaagttttcctatgatcctcactccc 22437983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 38358087 - 38358169
Alignment:
Q  168 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttcca 250  Q
    |||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||    
T  38358087 ctctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctcca 38358169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 476779 - 476893
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||| ||||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| |||||| |    
T  476779 acctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaagcact 476878  T
Q  214 attaaactctctcat 228  Q
    ||||||||| |||||    
T  476879 attaaactccctcat 476893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 31864835 - 31864884
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccattt 198  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  31864835 accctataccataagcctcctctatccactaacatcctccaacaccattt 31864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 8299725 - 8299646
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||    
T  8299725 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctc 8299646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 10780798 - 10780880
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  10780798 caacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 10780880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 31864393 - 31864439
Alignment:
Q  152 ctataccataaacctcctctatcaactaacatcctccatcaccattt 198  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  31864393 ctataccataagcctcctctatccactaacatcctccaacaccattt 31864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 315
Target Start/End: Original strand, 34481549 - 34481715
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    ||||||||||| || || ||||| || || ||||||| ||| ||||||||  |||| ||||| || ||||||||  |||  | ||| ||||||||||  |    
T  34481549 accctataccacaacccacctctgtctaccaacatccgccaacaccatttccctaacaaagctatgttaaactccttcactttcctcacccccaaaccac 34481648  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||||||   |||||||||| ||| |||||  | ||||||||||||||| |  |||||||||||    
T  34481649 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctgttatcctcactccc 34481715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 588099 - 588163
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 204  Q
    ||||| |||||||||||||||||||| | ||||||||| | ||||||||| ||||| ||| ||||    
T  588099 gcaactaacaccctataccataaaccacatctatcaaccagcatcctccaacaccactttcctaa 588163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 41590627 - 41590711
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaa 163  Q
    |||||| |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| |  || |||||||||||||||||||||    
T  41590627 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaa 41590711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 25856982 - 25856903
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||| | ||||||||  | || |||||||| ||||||||||    
T  25856982 caacaccctactccacaaacctcccctatcaactaacagcctctaacaccatttccccaacaaagcaatgttaaactctc 25856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29572465 - 29572362
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29572465 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29572366  T
Q  195 attt 198  Q
    ||||    
T  29572365 attt 29572362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29573842 - 29573739
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29573842 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29573743  T
Q  195 attt 198  Q
    ||||    
T  29573742 attt 29573739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29575219 - 29575116
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29575219 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29575120  T
Q  195 attt 198  Q
    ||||    
T  29575119 attt 29575116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29576596 - 29576493
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29576596 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29576497  T
Q  195 attt 198  Q
    ||||    
T  29576496 attt 29576493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29577973 - 29577870
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29577973 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29577874  T
Q  195 attt 198  Q
    ||||    
T  29577873 attt 29577870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 29579350 - 29579247
Alignment:
Q  95 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 194  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29579350 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29579251  T
Q  195 attt 198  Q
    ||||    
T  29579250 attt 29579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 33170286 - 33170337
Alignment:
Q  176 actaacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||||| ||||    
T  33170286 actaacaacctccaacaccattttcctaacaaagcaatattaaactccctca 33170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 4297918 - 4297833
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||| |||||||| |||||  ||||| ||  | |||||||  ||||||||||||| |  || ||||||||||||||||||||||    
T  4297918 ccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaac 4297833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 35122240 - 35122151
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    |||||| || ||| ||||||| |||||||||||||| ||||||||  ||| ||| |||| ||||||||  |||| |  ||||||||||||    
T  35122240 ataccacaatccttctctatccactaacatcctccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaa 35122151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 42928662 - 42928810
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcga-cctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaac 177  Q
    |||||| ||||||| |||||| |||||||||| | | ||||| | || || || |||| | ||| |||||||||||| |||||||| || | ||||| |     
T  42928662 ccaccacgaagaacaactccggcccccatcctccaaacctccat-ccgccacatcatacctagccaccaacaccctacaccataaagcttccctatctat 42928760  T
Q  178 taacatcctccatcaccatttttctaataaagcaatattaaactctctca 227  Q
    |||||  | ||| ||||| ||| | || ||||||||||||||||||||||    
T  42928761 taacaatcgccaacaccactttcccaacaaagcaatattaaactctctca 42928810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 27796065 - 27796157
Alignment:
Q  129 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    ||||||| | ||| ||||||||||||  |||||| ||  ||||||||||||||| || ||| ||||||||  |||  |||||||| |||||||    
T  27796065 caccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 27796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 27393528 - 27393379
Alignment:
Q  109 cttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaa 208  Q
    |||| |||||||| ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||||| ||| |||| ||     
T  27393528 cttcaacctccctgcctcctcaccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacaccactttcctaacaat 27393429  T
Q  209 gcaatattaaactctctcatctacctaacccccaaacttccatgctcctt 258  Q
    |||| ||||||||| | || || ||| ||||||||||  | |||||||||    
T  27393428 gcaagattaaactcccgcaacttcctcacccccaaaccacaatgctcctt 27393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 20987729 - 20987849
Alignment:
Q  122 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 221  Q
    |||||||||||||| ||||| ||||||||||||| |||||| ||| ||||||| || ||||||||||| ||||||||  |||| || ||| ||||||| |    
T  20987729 acctcctcaccataccgagccaccaacaccctatgccataacccttctctatccaccaacatcctccagcaccatttccctaacaacgcagtattaaatt 20987828  T
Q  222 ctctcatctacctaaccccca 242  Q
    | |||| || |||||||||||    
T  20987829 ccctcaactgcctaaccccca 20987849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 32352849 - 32352683
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    ||||||||||| ||||| |||||||| || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||| ||||||||||  |    
T  32352849 accctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttcctcacccccaaaccgc 32352750  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||||||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  32352749 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc 32352683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 33142778 - 33142658
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    |||||||||| ||||| || ||||||||||||||||| || ||| ||||||||||||||| |||||| ||||||||  |||| | ||| | |||||| ||    
T  33142778 cctcctcaccgtaacgggccaccaacaccctataccacaagccttctctatcaactaacaacctccaacaccatttacctaagagagccaaattaaattc 33142679  T
Q  223 tctcatctacctaacccccaa 243  Q
    |||||||  ||| ||||||||    
T  33142678 tctcatcctcctcacccccaa 33142658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 52692002 - 52692134
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||||||| |  ||  | |||||||  ||||||||||||| || || ||||||||||||||||| || ||  ||||||| ||     
T  52692002 ccaccaagaagaatcactccgaccctctaccaccaacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccctctctatccacc 52692101  T
Q  179 aacatcctccatcaccatttttctaataaagca 211  Q
    ||||||||||| ||||||||| |||||||||||    
T  52692102 aacatcctccaacaccattttcctaataaagca 52692134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 314
Target Start/End: Complemental strand, 25504603 - 25504368
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||| | |||||| ||| | |||||||   | |||| |||||||| || || || || |||||||| ||||| || ||||| |||    
T  25504603 ccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccact 25504504  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||  ||| ||  |||||||| || | ||||  ||||||    | |||||||    |||    
T  25504503 aacatcctccaacaccatttccctagtaaggcaatattaaactccatcaactgtctaacccctaaccctccaaactccttctggagacaaacagagctcc 25504404  T
Q  279 aaccaatccaagaaattttcctatgttcctcactcc 314  Q
    |||| |||||||| ||||||||||| ||||||||||    
T  25504403 aacctatccaagatattttcctatgatcctcactcc 25504368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 318
Target Start/End: Original strand, 38070363 - 38070601
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| | |||| |||||||||||||| ||| | ||| |||  ||||||||||||| |  || ||||| || |||||||| || ||||||||||| ||     
T  38070363 ccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccataccttgccaccaaaactctataccacaaccctcctctatccacc 38070462  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    |||| || ||| |||||||||  ||||||| |||||||||| ||  ||| ||  || | ||||||||  ||||  ||||||  |||||||||| |  |||    
T  38070463 aacaaccgccaacaccattttcttaataaaacaatattaaattcattcaactgtctca-ccccaaacccccatcttccttacgtaaacaaacagtgctcc 38070561  T
Q  279 aaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    || | ||||| ||||||||||| |  ||||||||||||||    
T  38070562 aagcgatccatgaaattttcctgttatcctcactccctcc 38070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 21405368 - 21405518
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||| | |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  21405368 ccaccacgaagaaacactctggcccccaaccaccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactacccttatcaact 21405467  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 229  Q
    || | |||||| ||||||||| |||| | || || ||||||||| ||||||    
T  21405468 aataacctccaacaccattttcctaacagagaaacattaaactccctcatc 21405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 318
Target Start/End: Complemental strand, 3544675 - 3544471
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||| ||||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| ||| ||      
T  3544675 acctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaaacaca 3544576  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
    ||||||||| |||| ||| || || ||||| | ||||| ||||||   ||||||||||   |||||| | | ||| ||||||||||| |  |||||||||    
T  3544575 attaaactccctcagctatctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactc 3544476  T
Q  314 cctcc 318  Q
    |||||    
T  3544475 cctcc 3544471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 13867394 - 13867302
Alignment:
Q  127 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 219  Q
    ||||||||| ||||| ||||  ||||||||||||||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| |||||||    
T  13867394 ctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaa 13867302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 22191391 - 22191227
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||  || ||||||||||||||||| | ||  ||  ||||||||    
T  22191391 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacacgccaccaacaccctataccacatactacccttatcaact 22191292  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  22191291 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 22191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 45795854 - 45796045
Alignment:
Q  127 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc 226  Q
    ||||||||| || || ||||  ||| ||||||||||||| ||| |||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   |    
T  45795854 ctcaccataccgtgctaccaggaccttataccataaaccacctttatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgc 45795953  T
Q  227 atctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    | || ||| |||||||| | ||||| |||||||  ||||||||||    ||||| ||| |||| ||| |||||| |  ||||||||||||||    
T  45795954 aacttcctcacccccaaccctccatactccttacgtaaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctcc 45796045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 3074276 - 3074426
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| |||||||  ||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||| ||||  ||    
T  3074276 ccaccacgaagaaacactccggtccccaaccgccaacctcccatcctcctcaccataacgcgctaccaacaccctataccacatactacctttatcgtct 3074375  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 229  Q
    |  | |||||| ||||||||| |||| | || || ||||||||| ||||||    
T  3074376 agtaacctccaacaccattttcctaacagagaaacattaaactccctcatc 3074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 28358435 - 28358540
Alignment:
Q  93 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 192  Q
    ||||||| |||||| ||| | |||||||| ||||||||||||| |  || ||||||||||| ||||| || || |||||||| || ||||  ||||| ||    
T  28358435 cactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctgtaccaaaacccgcctctatctaccaacaatctccaaca 28358534  T
Q  193 ccattt 198  Q
    ||||||    
T  28358535 ccattt 28358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 34853182 - 34853081
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| |||||| |||||||||||||||||||||| ||   |||  ||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||||    
T  34853182 ataccacaaaccttctctatcaactaacatcctccaacaatgtttacctagtaaatcaacattaaactctttcagcttccttaccctcaaacctccatgc 34853083  T
Q  254 tc 255  Q
    ||    
T  34853082 tc 34853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 1248160 - 1248052
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    |||||||||||||||||||||| |  || ||||||| ||||||||| ||||| ||| |||| || || || | ||| ||| ||||  |||| |||||| |    
T  1248160 acctccctacctcctcaccatatctcgccaccaacagcctataccaaaaaccacctttatccaccaatatacaccaacactatttacctaacaaagcact 1248061  T
Q  214 attaaactc 222  Q
    |||||||||    
T  1248060 attaaactc 1248052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 309
Target Start/End: Original strand, 20796262 - 20796418
Alignment:
Q  153 tataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatg 252  Q
    ||||||| || ||| ||||||  || ||||||||||| ||||||||  |||| ||||||| ||||||||| |||| |  |||||||||||| | ||||      
T  20796262 tataccacaaccctactctatttaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaacctcctaacccccaatcctccaga 20796361  T
Q  253 ctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctc 309  Q
    |||||| |   |||| | | | |||||||| ||||||| |||||||| ||| |||||    
T  20796362 ctcctttggagaacacaaagtattccaacctatccaagtaattttccgatggtcctc 20796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 25252234 - 25252182
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacct 166  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||    
T  25252234 acctccctgcctcttcatcataacgagctaccaacaccctataccacaaacct 25252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 19042671 - 19042737
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcca 189  Q
    |||||||||| ||||| || || |||||||||||||| || ||  |||||||||||||||| |||||    
T  19042671 cctcctcaccgtaacgggccactaacaccctataccacaacccctctctatcaactaacattctcca 19042737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 315
Target Start/End: Complemental strand, 7396239 - 7396095
Alignment:
Q  171 tatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaac 270  Q
    ||||||| ||||||||||| |||||  |  |||| ||||||  ||||||||| |||| ||  ||||||| ||| | ||||| |||||||   | ||| ||    
T  7396239 tatcaaccaacatcctccaacaccacatgcctaaaaaagcataattaaactccctcaactgtctaaccctcaaccctccatactccttatgcagacacac 7396140  T
Q  271 atttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| | |||||| |||||| | ||||||||||| | |||||||||    
T  7396139 attatgccaacctatccaaaagattttcctatggttctcactccc 7396095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 318
Target Start/End: Complemental strand, 1104521 - 1104317
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    ||||| || |||||||||||||||||||||||| |||||||||||| ||||| | |||||  |||||||  ||||| ||||||||  |||| |||||| |    
T  1104521 acctcactgcctcctcaccataacgagcaaccatcaccctataccacaaaccacatctatttactaacaaactccaacaccatttacctaacaaagcagt 1104422  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
     |||| ||| ||||||| ||||||||| || | ||||   |||||  ||  ||||||||||||||| |  |||||| ||||||| ||||  |||||||||    
T  1104421 gttaatctccctcatctgcctaaccccaaaccctccagaatcctttcctggacaaacatttttccagctgatccaaaaaattttgctattgtcctcactc 1104322  T
Q  314 cctcc 318  Q
    |||||    
T  1104321 cctcc 1104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 126 - 318
Target Start/End: Complemental strand, 15988072 - 15987880
Alignment:
Q  126 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 225  Q
    |||||||||| ||||| ||||| ||| | ||||||||||| | | || | ||||||||||| |||||  ||||  |||| |||||||| ||||||||  |    
T  15988072 cctcaccataccgagctaccaataccttgtaccataaaccccttttagccactaacatcctacatcataatttacctaacaaagcaatgttaaactccat 15987973  T
Q  226 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctcc 318  Q
    ||||| ||||||||| |||| || ||  ||||||   ||||| | ||| | |||||||||||||||||||||||||| || ||||||||||||    
T  15987972 catcttcctaacccctaaacctcaataatccttactcaaacatatattatgccaaccaatccaagaaattttcctatatttctcactccctcc 15987880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 318
Target Start/End: Original strand, 26514264 - 26514494
Alignment:
Q  88 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 187  Q
    |||||||||||| |||||| ||| | | |||||| ||||||||||||| ||||| |||||||| |||||||| || ||  ||||||| || | |||||||    
T  26514264 agaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctataccagaacccctctctatccaccagcatcctc 26514363  T
Q  188 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatcc 287  Q
    || ||||  ||  ||||||||||| ||||||| || || ||||  || |||||||| | ||||| ||||||   |||||| ||     ||||| ||||||    
T  26514364 caacacctattccctaataaagcactattaaattcccttatctgtctcacccccaaccctccatactcctttcgtaaacatactgagctccaagcaatcc 26514463  T
Q  288 aagaaattttcctatgttcctcactccctcc 318  Q
    | |||||||||||||  ||||||||||||||    
T  26514464 aggaaattttcctattatcctcactccctcc 26514494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 503141 - 502905
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||||| |||||||||| | |||||||   | |||| |||||||| || || || || ||||| || ||||| || ||||| |||    
T  503141 ccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgggcgactaaaactctatatcaaaaaccacccctatccact 503042  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||  ||| ||  |||||||| || | ||||  ||||||   || |||||||    |||    
T  503041 aacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttgtagacaaacagagctcc 502942  T
Q  279 aaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||| |||||||| ||||||||||| |||||||||||    
T  502941 aacctatccaagacattttcctatgatcctcactccc 502905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 29056050 - 29056216
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||   || |||| |||    
T  29056050 ccaccacgaagaaacactccggcccccaaccgccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactatctttatcgact 29056149  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaac 245  Q
    || | |||||| |||||||||||||| | || || ||||||||| ||||||  ||| ||||||||||    
T  29056150 aataacctccaacaccatttttctaacagagaaacattaaactccctcatcctcctcacccccaaac 29056216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 10920038 - 10919957
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 195  Q
    |||||||  ||||||||||||| | ||||||||||||||||||||| || || ||||||||||| ||||||||||| |||||    
T  10920038 acctccccgcctcctcaccatacctagcaaccaacaccctataccaaaacccccctctatcaaccaacatcctccaacacca 10919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 314
Target Start/End: Original strand, 15511195 - 15511383
Alignment:
Q  125 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    ||||| ||||| ||||| ||||||||| | |||||||||||   | || | |||||||||||  ||||  ||||  |||  |||||||  |||||||| |    
T  15511195 tcctcgccataccgagctaccaacaccttgtaccataaaccctttttagccactaacatcctatatcataatttacctac-aaagcaaagttaaactccc 15511293  T
Q  225 tcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactcc 314  Q
    |||||| ||||||||| |||| |||||  |||||||  ||||| | ||| | |||||||||||||||||||||||||| || ||||||||    
T  15511294 tcatcttcctaacccctaaacctccataatccttagtcaaacagatattatgccaaccaatccaagaaattttcctatatttctcactcc 15511383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 13086078 - 13086234
Alignment:
Q  87 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 186  Q
    |||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| |||||| ||||||| || ||||||||    
T  13086078 aagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaacctactctatctaccaacatcct 13086177  T
Q  187 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    ||| ||||||||  |||| ||||||| |||||||||  ||| || ||||||||||||    
T  13086178 ccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaa 13086234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 21549469 - 21549558
Alignment:
Q  169 tctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatgctcctt 258  Q
    ||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| ||| |||||||||| ||||||||||||    
T  21549469 tctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctcacccccaaacctccatgctcctt 21549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 317
Target Start/End: Original strand, 32186214 - 32186452
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| |||||| ||||||| |||||| ||| | |||||||  || |||||| ||| |  || ||||||||||||||||| || || |||||||| ||     
T  32186214 ccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctataccaaaacccacctctatccacc 32186313  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 278  Q
    |||| |  ||| |||||||| || || || || | |||||||||||| | || ||| |||||||  | | ||| ||||||| ||||||||| |    |||    
T  32186314 aacaactgccaacaccatttatccaacaaggctaaattaaactctctaaactgcctcacccccagcccttcatactccttacctaaacaaatagagctcc 32186413  T
Q  279 aaccaatccaagaaattttcctatgttcctcactccctc 317  Q
    || ||||||| ||||||||||| |  |||||||||||||    
T  32186414 aagcaatccaggaaattttcctgttatcctcactccctc 32186452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 25350788 - 25350885
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 211  Q
    |||||||  ||||||||||||| || || ||||||||||||||||| || ||  ||||||| || |||||||||||  |||||||| |||||||||||    
T  25350788 acctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccatctctatccaccaacatcctccaaaaccattttcctaataaagca 25350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 28576005 - 28575925
Alignment:
Q  143 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| || ||||||  ||||| ||| |||||||||||||    
T  28576005 accaacaccctataccataatcc-cctctatccactaacatcctccaacatcattttcttaatagagccatattaaactctc 28575925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 315
Target Start/End: Original strand, 33640495 - 33640684
Alignment:
Q  126 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 225  Q
    |||| |||||||| || || || || |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  33640495 cctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaacattaaactcctt 33640594  T
Q  226 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| |||||||||||    
T  33640595 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcactccc 33640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 18588880 - 18588983
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    ||||||| ||||||||   ||||||||||||| | |||||||  ||||||||||||| | ||| |||||||| | ||||||||| ||  |||||||||||    
T  18588880 ccaccataaagaaccaacacgacccccatcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccataacccgtctctatcaact 18588979  T
Q  179 aaca 182  Q
    ||||    
T  18588980 aaca 18588983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 11469100 - 11469331
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcc-tcaccataacgagcaaccaacaccctataccataaacctcctctatcaac 177  Q
    |||||| ||||||| |||||| ||||| |||| | ||||||| |||| | |||||||| || || || ||||| | |||||| || ||| || |||| ||    
T  11469100 ccaccaagaagaacaactccg-cccccttcctccaacctccc-acctacgtcaccatatcgggcgactaacacacgataccacaacccttctttatctac 11469197  T
Q  178 taacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttc 277  Q
     ||||||||||| ||||||||  |||  || || |||||||||||| ||| || ||||||| ||| || ||||  |||||| |   |||||||| | ||     
T  11469198 caacatcctccaacaccatttacctagcaatgctatattaaactctttcaacttcctaaccgccagacctccaaactcctttgacgaacaaacaatattt 11469297  T
Q  278 caaccaatccaagaaattttcctatgttcctcac 311  Q
    ||||||||| ||| |||||||||||| |||||||    
T  11469298 caaccaatctaagtaattttcctatgatcctcac 11469331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 34180499 - 34180560
Alignment:
Q  123 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatc 184  Q
    ||||||||||||| | |||| |||||||||||||| | | ||||||||||||||||||||||    
T  34180499 cctcctcaccatatctagcagccaacaccctatacgaaagacctcctctatcaactaacatc 34180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 318
Target Start/End: Complemental strand, 14843711 - 14843507
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    ||||||||  |||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| ||| || |    
T  14843711 acctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatcact 14843612  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
    ||||||||| |||| ||  || || ||||| | ||||| ||||||   ||||||||||   |||||| | | ||| ||||||||||| |  |||||||||    
T  14843611 attaaactccctcagctttctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttccttttatcctcactc 14843512  T
Q  314 cctcc 318  Q
    |||||    
T  14843511 cctcc 14843507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 12107194 - 12107091
Alignment:
Q  125 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    |||||| |||||||||  |||||||| |||||||| |||||   |||||| ||||||||  | || |||||||| ||||||| ||| | |||||||||||    
T  12107194 tcctcatcataacgagtcaccaacactctataccacaaaccatttctatctactaacatttttcaacaccatttctctaatagagccaaattaaactctc 12107095  T
Q  225 tcat 228  Q
    ||||    
T  12107094 tcat 12107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 17577261 - 17577182
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 224  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||    
T  17577261 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctc 17577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 17605877 - 17605766
Alignment:
Q  145 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 244  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| ||||||||||||| |  |||||| |||||     
T  17605877 caacaccctactccacaaacctcccctatcaactaacagccaccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaac 17605778  T
Q  245 cttccatgctcc 256  Q
    | ||||| ||||    
T  17605777 cctccatactcc 17605766  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 19256171 - 19256314
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    |||||| ||||||| |||| | |||||| ||| | |||||||   | |||| |||||||| || || || || |||||||| ||||| || ||||| |||    
T  19256171 ccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccact 19256270  T
Q  179 aacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| ||||||||  ||| ||| |||| |||||||||    
T  19256271 aacatcctccaacaccatttccctagtaatgcaacattaaactc 19256314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 23065580 - 23065478
Alignment:
Q  154 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 253  Q
    |||||| |||||| ||||||||||||||| |||| | ||||||||  ||| |||| ||| |||||||||  ||| ||  |||||||| |||| |||||||    
T  23065580 ataccacaaaccttctctatcaactaacaacctctaacaccatttacctagtaaatcaacattaaactccttcaactttctaaccccgaaacctccatgc 23065481  T
Q  254 tcc 256  Q
    |||    
T  23065480 tcc 23065478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 10362664 - 10362749
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 164  Q
    |||||| |||||||||||||| |||||  ||| | |||||||  ||||||||||||| |  || ||||| ||||||||||||||||    
T  10362664 ccaccaagaagaaccactccggccccccacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 10362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 19350489 - 19350570
Alignment:
Q  93 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 174  Q
    ||||||| |||||| ||| | |||||||| ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  19350489 cactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 19350570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 7956279 - 7956176
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    ||||||| ||||||||||||| || | ||||| | |||||||  ||||||||||||| | ||| |||||||| | |||||| | |||  |||||||||||    
T  7956279 ccaccataaagaaccactccggcctc-atcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccaaagaccatctctatcaact 7956181  T
Q  179 aacat 183  Q
    |||||    
T  7956180 aacat 7956176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 14551979 - 14552073
Alignment:
Q  124 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaacta-acatcctccatcaccatttttctaataaagcaatattaaa 219  Q
    |||||| |||||||||||||| |||||| ||||||| |||||  ||||||| |||| ||| |||||| ||||||||  |||||| ||||||||||||    
T  14551979 ctcctcgccataacgagcaac-aacaccttataccacaaaccctctctatccactagaca-cctccaacaccatttacctaatagagcaatattaaa 14552073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 315
Target Start/End: Original strand, 15674430 - 15674596
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 248  Q
    ||||||||||| |||||  |||  || || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  15674430 accctataccacaaaccatctcggtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccgc 15674529  T
Q  249 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    ||| ||||||   |||||||||| ||| ||| |  | |||||||||||||||||  |||||||||||    
T  15674530 catactccttttttaaacaaacagtttgccagcttaaccaagaaattttcctattatcctcactccc 15674596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 29976596 - 29976522
Alignment:
Q  100 acccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 174  Q
    ||||||| ||| | |||||||| ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  29976596 acccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 29976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 23347006 - 23346933
Alignment:
Q  149 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 222  Q
    ||||||||||| ||||| |||||||| || | ||||| ||| ||||||||| |||| ||||| | |||||||||    
T  23347006 accctataccacaaaccacctctatccaccagcatccgccaacaccattttcctaacaaagctaaattaaactc 23346933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 298
Target Start/End: Original strand, 67608 - 67830
Alignment:
Q  76 ccaccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatca 175  Q
    ||||||||| |||||||||||||  |||||| ||| | |||||||| ||||||||||||| | || || ||||||||||||||| || |||||||| |||    
T  67608 ccaccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctataccaaaaccctcctctgtca 67707  T
Q  176 actaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttt 275  Q
    | ||||| |||||| ||| | | | |||  |  || | |||||||||  | | || |||||||||||||| ||||| |||||| |  | ||||||| | |    
T  67708 attaacaacctccaacactactatcctagaagggctaaattaaactcatttaactgcctaacccccaaacctccatcctcctttgaaagacaaacaatgt 67807  T
Q  276 tccaaccaatccaagaaattttc 298  Q
    ||||||||||||||  |||||||    
T  67808 tccaaccaatccaatgaattttc 67830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 4104 - 3929
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 239  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| | |||| ||||||||||  ||| ||  || ||||    
T  4104 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaactccttcaactgtctcaccc 4005  T
Q  240 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||| ||||| ||||||   | |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  4004 ccaaacctccatactccttttttgaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 3929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 36081 - 36160
Alignment:
Q  125 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 204  Q
    ||||||||||||||||| |||||||| |||||||| |||||   |||||| |||| ||||||||| ||||||||| ||||    
T  36081 tcctcaccataacgagccaccaacactctataccacaaaccatttctatctactatcatcctccaacaccattttcctaa 36160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 327683 - 327508
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 239  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  327683 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 327584  T
Q  240 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||| ||||| ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  327583 ccaaacctccatactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 327508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 312229 - 312054
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 239  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  312229 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 312130  T
Q  240 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||| ||| | ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  312129 ccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 312054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 164 - 308
Alignment:
Q  168 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaaca 267  Q
    ||||||| ||||||| |||||| ||||||||  |||| |||||||| ||||||||||||| |  |||||| ||||| | ||||| |||| |    |||||    
T  164 ctctatctactaacaacctccaacaccatttccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 263  T
Q  268 aacatttttccaaccaatccaagaaattttcctatgttcctcact 312  Q
     | |   ||||||||||||||||||||||| || | |||||||||    
T  264 caaagaattccaaccaatccaagaaatttttcttttttcctcact 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 134402 - 134227
Alignment:
Q  140 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 239  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  134402 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 134303  T
Q  240 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 315  Q
    |||||| ||| | ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  134302 ccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 134227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 6619 - 6729
Alignment:
Q  79 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 178  Q
    ||||||||| ||| ||||||  |||||| ||| | |||||||| ||||||||||||| |  || || || ||||||||||| ||||| ||||  || ||     
T  6619 ccaccatgatgaagcactccagcccccaacctccaacctccctgcctcctcaccatatctcgccactaaaaccctataccacaaaccgcctcgctctacc 6718  T
Q  179 aacatcctcca 189  Q
    |||||||||||    
T  6719 aacatcctcca 6729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 86799 - 86730
Alignment:
Q  90 aaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctatacca 159  Q
    |||||||| |||||||||||| | |||||||   |||||||||||| | |||||||||||| | ||||||    
T  86799 aaccactctgacccccatcctccaacctcccacactcctcaccatatctagcaaccaacactcgatacca 86730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 318
Target Start/End: Complemental strand, 34183 - 33979
Alignment:
Q  114 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 213  Q
    ||||||||  |||||||||||| |  || |||| |||||||||||| |||||  |||| || || ||||| | ||| |||| |||  |||| |||||| |    
T  34183 acctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagcact 34084  T
Q  214 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 313  Q
    ||||||||| |||| ||  || || ||||| | ||||| ||||||   ||||||||||   |||||| | | | | ||||||||||| |  |||||||||    
T  34083 attaaactccctcagctgtctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacctaggaaattttcctgttatcctcactc 33984  T
Q  314 cctcc 318  Q
    |||||    
T  33983 cctcc 33979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 3096 - 3024
Alignment:
Q  171 tatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 243  Q
    ||||||| | ||||||||| ||||||||  ||||||||| || ||||||  |||||| || ||||||||||||    
T  3096 tatcaaccaccatcctccaacaccatttacctaataaagaaaaattaaaagctctcaactgcctaacccccaa 3024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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